| Year |
Citation |
Score |
| 2023 |
Dalhuisen T, Plenderleith LJ, Ursani I, Philip N, Hahn BH, Sharp PM. Unusually divergent ubiquitin genes and proteins in Plasmodium species. Genome Biology and Evolution. PMID 37481258 DOI: 10.1093/gbe/evad137 |
0.328 |
|
| 2020 |
Sharp PM, Plenderleith LJ, Hahn BH. Ape Origins of Human Malaria. Annual Review of Microbiology. 74: 39-63. PMID 32905751 DOI: 10.1146/Annurev-Micro-020518-115628 |
0.327 |
|
| 2019 |
Plenderleith LJ, Liu W, Learn GH, Loy DE, Speede S, Sanz CM, Morgan DB, Bertolani P, Hart JA, Hart TB, Hahn BH, Sharp PM. Ancient introgression between two ape malaria parasite species. Genome Biology and Evolution. PMID 31697367 DOI: 10.1093/Gbe/Evz244 |
0.417 |
|
| 2019 |
Proto WR, Siegel SV, Dankwa S, Liu W, Kemp A, Marsden S, Zenonos ZA, Unwin S, Sharp PM, Wright GJ, Hahn BH, Duraisingh MT, Rayner JC. Adaptation of Plasmodium falciparum to humans involved the loss of an ape-specific erythrocyte invasion ligand. Nature Communications. 10: 4512. PMID 31586047 DOI: 10.1038/S41467-019-12294-3 |
0.353 |
|
| 2019 |
Riddell CE, Frederickson-Matika D, Armstrong AC, Elliot M, Forster J, Hedley PE, Morris J, Thorpe P, Cooke DE, Pritchard L, Sharp PM, Green S. Metabarcoding reveals a high diversity of woody host-associated spp. in soils at public gardens and amenity woodlands in Britain. Peerj. 7: e6931. PMID 31143546 DOI: 10.7717/Peerj.6931 |
0.328 |
|
| 2018 |
Barbian HJ, Connell AJ, Avitto AN, Russell RM, Smith AG, Gundlapally MS, Shazad AL, Li Y, Bibollet-Ruche F, Wroblewski EE, Mjungu D, Lonsdorf EV, Stewart FA, Piel AK, Pusey AE, ... Sharp PM, et al. CHIIMP: An automated high-throughput microsatellite genotyping platform reveals greater allelic diversity in wild chimpanzees. Ecology and Evolution. 8: 7946-7963. PMID 30250675 DOI: 10.1002/Ece3.4302 |
0.301 |
|
| 2018 |
Loy DE, Plenderleith LJ, Sundararaman SA, Liu W, Gruszczyk J, Chen YJ, Trimboli S, Learn GH, MacLean OA, Morgan ALK, Li Y, Avitto AN, Giles J, Calvignac-Spencer S, Sachse A, ... ... Sharp PM, et al. Evolutionary history of human revealed by genome-wide analyses of related ape parasites. Proceedings of the National Academy of Sciences of the United States of America. PMID 30127015 DOI: 10.1073/Pnas.1810053115 |
0.364 |
|
| 2018 |
Plenderleith LJ, Liu W, MacLean OA, Li Y, Loy DE, Sundararaman SA, Bibollet-Ruche F, Learn GH, Hahn BH, Sharp PM. Adaptive Evolution of RH5 in Ape Plasmodium species of the Laverania Subgenus. Mbio. 9. PMID 29362238 DOI: 10.1128/Mbio.02237-17 |
0.348 |
|
| 2017 |
Liu W, Sherrill-Mix S, Learn GH, Scully EJ, Li Y, Avitto AN, Loy DE, Lauder AP, Sundararaman SA, Plenderleith LJ, Ndjango JN, Georgiev AV, Ahuka-Mundeke S, Peeters M, Bertolani P, ... ... Sharp PM, et al. Wild bonobos host geographically restricted malaria parasites including a putative new Laverania species. Nature Communications. 8: 1635. PMID 29158512 DOI: 10.1038/S41467-017-01798-5 |
0.302 |
|
| 2017 |
Barbian HJ, Jackson-Jewett R, Brown CS, Bibollet-Ruche F, Learn GH, Decker T, Kreider EF, Li Y, Denny TN, Sharp PM, Shaw GM, Lifson J, Acosta EP, Saag MS, Bar KJ, et al. Effective treatment of SIVcpz-induced immunodeficiency in a captive western chimpanzee. Retrovirology. 14: 35. PMID 28576126 DOI: 10.1186/S12977-017-0359-0 |
0.318 |
|
| 2017 |
Iyer SS, Bibollet-Ruche F, Sherrill-Mix S, Learn GH, Plenderleith L, Smith AG, Barbian HJ, Russell RM, Gondim MV, Bahari CY, Shaw CM, Li Y, Decker T, Haynes BF, Shaw GM, ... Sharp PM, et al. Resistance to type 1 interferons is a major determinant of HIV-1 transmission fitness. Proceedings of the National Academy of Sciences of the United States of America. PMID 28069935 DOI: 10.1073/Pnas.1620144114 |
0.307 |
|
| 2016 |
Liu W, Sundararaman SA, Loy DE, Learn GH, Li Y, Plenderleith LJ, Ndjango JN, Speede S, Atencia R, Cox D, Shaw GM, Ayouba A, Peeters M, Rayner JC, Hahn BH, ... Sharp PM, et al. Multigenomic Delineation of Plasmodium Species of the Laverania Subgenus Infecting Wild-living Chimpanzees and Gorillas. Genome Biology and Evolution. PMID 27289102 DOI: 10.1093/Gbe/Evw128 |
0.373 |
|
| 2016 |
Nowell RW, Laue BE, Sharp PM, Green S. Comparative genomics reveals genes significantly associated with woody hosts in the plant pathogen Pseudomonas syringae. Molecular Plant Pathology. PMID 27145446 DOI: 10.1111/Mpp.12423 |
0.385 |
|
| 2016 |
Sundararaman SA, Plenderleith LJ, Liu W, Loy DE, Learn GH, Li Y, Shaw KS, Ayouba A, Peeters M, Speede S, Shaw GM, Bushman FD, Brisson D, Rayner JC, Sharp PM, et al. Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria. Nature Communications. 7: 11078. PMID 27002652 DOI: 10.1038/Ncomms11078 |
0.375 |
|
| 2015 |
Larremore DB, Sundararaman SA, Liu W, Proto WR, Clauset A, Loy DE, Speede S, Plenderleith LJ, Sharp PM, Hahn BH, Rayner JC, Buckee CO. Ape parasite origins of human malaria virulence genes. Nature Communications. 6: 8368. PMID 26456841 DOI: 10.1038/Ncomms9368 |
0.383 |
|
| 2015 |
D'arc M, Ayouba A, Esteban A, Learn GH, Boué V, Liegeois F, Etienne L, Tagg N, Leendertz FH, Boesch C, Madinda NF, Robbins MM, Gray M, Cournil A, Ooms M, ... ... Sharp PM, et al. Origin of the HIV-1 group O epidemic in western lowland gorillas. Proceedings of the National Academy of Sciences of the United States of America. 112: E1343-52. PMID 25733890 DOI: 10.1073/Pnas.1502022112 |
0.34 |
|
| 2014 |
Kluge SF, Mack K, Iyer SS, Pujol FM, Heigele A, Learn GH, Usmani SM, Sauter D, Joas S, Hotter D, Bibollet-Ruche F, Plenderleith LJ, Peeters M, Geyer M, Sharp PM, et al. Nef proteins of epidemic HIV-1 group O strains antagonize human tetherin. Cell Host & Microbe. 16: 639-50. PMID 25525794 DOI: 10.1016/J.Chom.2014.10.002 |
0.304 |
|
| 2014 |
Nowell RW, Green S, Laue BE, Sharp PM. The extent of genome flux and its role in the differentiation of bacterial lineages. Genome Biology and Evolution. 6: 1514-29. PMID 24923323 DOI: 10.1093/Gbe/Evu123 |
0.412 |
|
| 2014 |
Liu W, Li Y, Shaw KS, Learn GH, Plenderleith LJ, Malenke JA, Sundararaman SA, Ramirez MA, Crystal PA, Smith AG, Bibollet-Ruche F, Ayouba A, Locatelli S, Esteban A, Mouacha F, ... ... Sharp PM, et al. African origin of the malaria parasite Plasmodium vivax. Nature Communications. 5: 3346. PMID 24557500 DOI: 10.1038/Ncomms4346 |
0.31 |
|
| 2013 |
Etienne L, Hahn BH, Sharp PM, Matsen FA, Emerman M. Gene loss and adaptation to hominids underlie the ancient origin of HIV-1. Cell Host & Microbe. 14: 85-92. PMID 23870316 DOI: 10.1016/J.Chom.2013.06.002 |
0.421 |
|
| 2013 |
Sharp PM, Rayner JC, Hahn BH. Evolution. Great apes and zoonoses. Science (New York, N.Y.). 340: 284-6. PMID 23599472 DOI: 10.1126/Science.1236958 |
0.342 |
|
| 2013 |
Sundararaman SA, Liu W, Keele BF, Learn GH, Bittinger K, Mouacha F, Ahuka-Mundeke S, Manske M, Sherrill-Mix S, Li Y, Malenke JA, Delaporte E, Laurent C, Mpoudi Ngole E, Kwiatkowski DP, ... ... Sharp PM, et al. Plasmodium falciparum-like parasites infecting wild apes in southern Cameroon do not represent a recurrent source of human malaria. Proceedings of the National Academy of Sciences of the United States of America. 110: 7020-5. PMID 23569255 DOI: 10.1073/Pnas.1305201110 |
0.363 |
|
| 2013 |
Piel AK, Stewart FA, Pintea L, Li Y, Ramirez MA, Loy DE, Crystal PA, Learn GH, Knapp LA, Sharp PM, Hahn BH. The malagarasi river does not form an absolute barrier to chimpanzee movement in Western Tanzania. Plos One. 8: e58965. PMID 23536841 DOI: 10.1371/Journal.Pone.0058965 |
0.312 |
|
| 2012 |
Li Y, Ndjango JB, Learn GH, Ramirez MA, Keele BF, Bibollet-Ruche F, Liu W, Easlick JL, Decker JM, Rudicell RS, Inogwabini BI, Ahuka-Mundeke S, Leendertz FH, Reynolds V, Muller MN, ... ... Sharp PM, et al. Eastern chimpanzees, but not bonobos, represent a simian immunodeficiency virus reservoir. Journal of Virology. 86: 10776-91. PMID 22837215 DOI: 10.1128/Jvi.01498-12 |
0.35 |
|
| 2012 |
Ayouba A, Mouacha F, Learn GH, Mpoudi-Ngole E, Rayner JC, Sharp PM, Hahn BH, Delaporte E, Peeters M. Ubiquitous Hepatocystis infections, but no evidence of Plasmodium falciparum-like malaria parasites in wild greater spot-nosed monkeys (Cercopithecus nictitans). International Journal For Parasitology. 42: 709-13. PMID 22691606 DOI: 10.1016/J.Ijpara.2012.05.004 |
0.322 |
|
| 2012 |
Bibollet-Ruche F, Heigele A, Keele BF, Easlick JL, Decker JM, Takehisa J, Learn G, Sharp PM, Hahn BH, Kirchhoff F. Efficient SIVcpz replication in human lymphoid tissue requires viral matrix protein adaptation. The Journal of Clinical Investigation. 122: 1644-52. PMID 22505456 DOI: 10.1172/Jci61429 |
0.349 |
|
| 2012 |
Green S, Laue BE, Steele H, Sharp PM. Using genomics to gain insights into the evolution and biology of Pseudomonas syringae pv. aesculi on European horse chestnut Journal of Agricultural Extension and Rural Development. 4. DOI: 10.5897/Jaerd12.052 |
0.303 |
|
| 2011 |
Sharp PM, Simmonds P. Evaluating the evidence for virus/host co-evolution. Current Opinion in Virology. 1: 436-41. PMID 22440848 DOI: 10.1016/J.Coviro.2011.10.018 |
0.315 |
|
| 2011 |
Sharp PM, Hahn BH. Origins of HIV and the AIDS pandemic. Cold Spring Harbor Perspectives in Medicine. 1: a006841. PMID 22229120 DOI: 10.1101/Cshperspect.A006841 |
0.332 |
|
| 2011 |
Culleton R, Coban C, Zeyrek FY, Cravo P, Kaneko A, Randrianarivelojosia M, Andrianaranjaka V, Kano S, Farnert A, Arez AP, Sharp PM, Carter R, Tanabe K. The origins of African Plasmodium vivax; insights from mitochondrial genome sequencing. Plos One. 6: e29137. PMID 22195007 DOI: 10.1371/Journal.Pone.0029137 |
0.336 |
|
| 2011 |
Sharp PM, Liu W, Learn GH, Rayner JC, Peeters M, Hahn BH. Source of the human malaria parasite Plasmodium falciparum. Proceedings of the National Academy of Sciences of the United States of America. 108: E744-5. PMID 21903922 DOI: 10.1073/Pnas.1112134108 |
0.303 |
|
| 2011 |
Rudicell RS, Piel AK, Stewart F, Moore DL, Learn GH, Li Y, Takehisa J, Pintea L, Shaw GM, Moore J, Sharp PM, Hahn BH. High prevalence of simian immunodeficiency virus infection in a community of savanna chimpanzees. Journal of Virology. 85: 9918-28. PMID 21775446 DOI: 10.1128/Jvi.05475-11 |
0.326 |
|
| 2011 |
Brown RJ, Peters PJ, Caron C, Gonzalez-Perez MP, Stones L, Ankghuambom C, Pondei K, McClure CP, Alemnji G, Taylor S, Sharp PM, Clapham PR, Ball JK. Intercompartmental recombination of HIV-1 contributes to env intrahost diversity and modulates viral tropism and sensitivity to entry inhibitors. Journal of Virology. 85: 6024-37. PMID 21471230 DOI: 10.1128/Jvi.00131-11 |
0.369 |
|
| 2011 |
Rayner JC, Liu W, Peeters M, Sharp PM, Hahn BH. A plethora of Plasmodium species in wild apes: a source of human infection? Trends in Parasitology. 27: 222-9. PMID 21354860 DOI: 10.1016/J.Pt.2011.01.006 |
0.307 |
|
| 2011 |
Emery LR, Sharp PM. Impact of translational selection on codon usage bias in the archaeon Methanococcus maripaludis. Biology Letters. 7: 131-5. PMID 20810428 DOI: 10.1098/Rsbl.2010.0620 |
0.415 |
|
| 2010 |
Liu W, Li Y, Peeters M, Rayner J, Sharp P, Shaw G, Hahn B. Single genome amplification and direct amplicon sequencing of Plasmodium spp. DNA from ape fecal specimens. Protocol Exchange. 2010. PMID 25221670 DOI: 10.1038/Nprot.2010.156 |
0.416 |
|
| 2010 |
Liu W, Li Y, Learn GH, Rudicell RS, Robertson JD, Keele BF, Ndjango JB, Sanz CM, Morgan DB, Locatelli S, Gonder MK, Kranzusch PJ, Walsh PD, Delaporte E, Mpoudi-Ngole E, ... ... Sharp PM, et al. Origin of the human malaria parasite Plasmodium falciparum in gorillas. Nature. 467: 420-5. PMID 20864995 DOI: 10.1038/Nature09442 |
0.376 |
|
| 2010 |
Sharp PM, Hahn BH. The evolution of HIV-1 and the origin of AIDS. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 365: 2487-94. PMID 20643738 DOI: 10.1098/Rstb.2010.0031 |
0.364 |
|
| 2010 |
Green S, Studholme DJ, Laue BE, Dorati F, Lovell H, Arnold D, Cottrell JE, Bridgett S, Blaxter M, Huitema E, Thwaites R, Sharp PM, Jackson RW, Kamoun S. Comparative genome analysis provides insights into the evolution and adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum. Plos One. 5: e10224. PMID 20419105 DOI: 10.1371/Journal.Pone.0010224 |
0.396 |
|
| 2010 |
Sharp PM, Emery LR, Zeng K. Forces that influence the evolution of codon bias. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 365: 1203-12. PMID 20308095 DOI: 10.1098/Rstb.2009.0305 |
0.397 |
|
| 2009 |
Sauter D, Schindler M, Specht A, Landford WN, Münch J, Kim KA, Votteler J, Schubert U, Bibollet-Ruche F, Keele BF, Takehisa J, Ogando Y, Ochsenbauer C, Kappes JC, Ayouba A, ... ... Sharp PM, et al. Tetherin-driven adaptation of Vpu and Nef function and the evolution of pandemic and nonpandemic HIV-1 strains. Cell Host & Microbe. 6: 409-21. PMID 19917496 DOI: 10.1016/J.Chom.2009.10.004 |
0.31 |
|
| 2009 |
Keele BF, Jones JH, Terio KA, Estes JD, Rudicell RS, Wilson ML, Li Y, Learn GH, Beasley TM, Schumacher-Stankey J, Wroblewski E, Mosser A, Raphael J, Kamenya S, Lonsdorf EV, ... ... Sharp PM, et al. Increased mortality and AIDS-like immunopathology in wild chimpanzees infected with SIVcpz. Nature. 460: 515-9. PMID 19626114 DOI: 10.1038/Nature08200 |
0.325 |
|
| 2009 |
Takehisa J, Kraus MH, Ayouba A, Bailes E, Van Heuverswyn F, Decker JM, Li Y, Rudicell RS, Learn GH, Neel C, Ngole EM, Shaw GM, Peeters M, Sharp PM, Hahn BH. Origin and biology of simian immunodeficiency virus in wild-living western gorillas. Journal of Virology. 83: 1635-48. PMID 19073717 DOI: 10.1128/Jvi.02311-08 |
0.398 |
|
| 2008 |
Liu W, Worobey M, Li Y, Keele BF, Bibollet-Ruche F, Guo Y, Goepfert PA, Santiago ML, Ndjango JB, Neel C, Clifford SL, Sanz C, Kamenya S, Wilson ML, Pusey AE, ... ... Sharp PM, et al. Molecular ecology and natural history of simian foamy virus infection in wild-living chimpanzees. Plos Pathogens. 4: e1000097. PMID 18604273 DOI: 10.1371/Journal.Ppat.1000097 |
0.372 |
|
| 2008 |
Salazar-Gonzalez JF, Bailes E, Pham KT, Salazar MG, Guffey MB, Keele BF, Derdeyn CA, Farmer P, Hunter E, Allen S, Manigart O, Mulenga J, Anderson JA, Swanstrom R, Haynes BF, ... ... Sharp PM, et al. Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing. Journal of Virology. 82: 3952-70. PMID 18256145 DOI: 10.1128/Jvi.02660-07 |
0.416 |
|
| 2007 |
Heuverswyn FV, Li Y, Bailes E, Neel C, Lafay B, Keele BF, Shaw KS, Takehisa J, Kraus MH, Loul S, Butel C, Liegeois F, Yangda B, Sharp PM, Mpoudi-Ngole E, et al. Genetic diversity and phylogeographic clustering of SIVcpzPtt in wild chimpanzees in Cameroon Virology. 368: 155-171. PMID 17651775 DOI: 10.1016/J.Virol.2007.06.018 |
0.397 |
|
| 2007 |
Wain LV, Bailes E, Bibollet-Ruche F, Decker JM, Keele BF, Van Heuverswyn F, Li Y, Takehisa J, Ngole EM, Shaw GM, Peeters M, Hahn BH, Sharp PM. Adaptation of HIV-1 to Its Human Host Molecular Biology and Evolution. 24: 1853-1860. PMID 17545188 DOI: 10.1093/Molbev/Msm110 |
0.373 |
|
| 2007 |
Takehisa J, Kraus MH, Decker JM, Li Y, Keele BF, Bibollet-Ruche F, Zammit KP, Weng Z, Santiago ML, Kamenya S, Wilson ML, Pusey AE, Bailes E, Sharp PM, Shaw GM, et al. Generation of infectious molecular clones of simian immunodeficiency virus from fecal consensus sequences of wild chimpanzees. Journal of Virology. 81: 7463-75. PMID 17494082 DOI: 10.1128/Jvi.00551-07 |
0.423 |
|
| 2007 |
Daix V, Schroeder H, Praet N, Georgin JP, Chiappino I, Gillet L, De Fays K, Decrem Y, Leboulle G, Godfroid E, Bollen A, Pastoret PP, Gern L, Sharp PM, Vanderplasschen A. Ixodes ticks belonging to the Ixodes ricinus complex encode a family of anticomplement proteins Insect Molecular Biology. 16: 155-166. PMID 17298559 DOI: 10.1111/J.1365-2583.2006.00710.X |
0.346 |
|
| 2007 |
Aghokeng AF, Bailes E, Loul S, Courgnaud V, Mpoudi-Ngolle E, Sharp PM, Delaporte E, Peeters M. Full-length sequence analysis of SIVmus in wild populations of mustached monkeys (Cercopithecus cephus) from Cameroon provides evidence for two co-circulating SIVmus lineages Virology. 360: 407-418. PMID 17156809 DOI: 10.1016/J.Virol.2006.10.048 |
0.406 |
|
| 2007 |
Henry I, Sharp PM. Predicting gene expression level from codon usage bias Molecular Biology and Evolution. 24: 10-12. PMID 17038449 DOI: 10.1093/Molbev/Msl148 |
0.374 |
|
| 2006 |
Van Heuverswyn F, Li Y, Neel C, Bailes E, Keele BF, Liu W, Loul S, Butel C, Liegeois F, Bienvenue Y, Ngolle EM, Sharp PM, Shaw GM, Delaporte E, Hahn BH, et al. Human immunodeficiency viruses: SIV infection in wild gorillas Nature. 444: 164. PMID 17093443 DOI: 10.1038/444164A |
0.314 |
|
| 2006 |
Schindler M, Münch J, Kutsch O, Li H, Santiago ML, Bibollet-Ruche F, Müller-Trutwin MC, Novembre FJ, Peeters M, Courgnaud V, Bailes E, Roques P, Sodora DL, Silvestri G, Sharp PM, et al. Nef-mediated suppression of T cell activation was lost in a lentiviral lineage that gave rise to HIV-1. Cell. 125: 1055-67. PMID 16777597 DOI: 10.1016/J.Cell.2006.04.033 |
0.303 |
|
| 2006 |
Keele BF, Van Heuverswyn F, Li Y, Bailes E, Takehisa J, Santiago ML, Bibollet-Ruche F, Chen Y, Wain LV, Liegeois F, Loul S, Ngole EM, Bienvenue Y, Delaporte E, Brookfield JF, ... Sharp PM, et al. Chimpanzee reservoirs of pandemic and nonpandemic HIV-1. Science (New York, N.Y.). 313: 523-6. PMID 16728595 DOI: 10.1126/Science.1126531 |
0.336 |
|
| 2006 |
Dewals B, Thirion M, Markine-Goriaynoff N, Gillet L, de Fays K, Minner F, Daix V, Sharp PM, Vanderplasschen A. Evolution of Bovine herpesvirus 4: Recombination and transmission between African buffalo and cattle Journal of General Virology. 87: 1509-1519. PMID 16690915 DOI: 10.1099/Vir.0.81757-0 |
0.431 |
|
| 2006 |
Wilson LA, Sharp PM. Enterobacterial repetitive intergenic consensus (ERIC) sequences in Escherichia coli: Evolution and implications for ERIC-PCR. Molecular Biology and Evolution. 23: 1156-68. PMID 16533821 DOI: 10.1093/Molbev/Msj125 |
0.571 |
|
| 2005 |
Santiago ML, Range F, Keele BF, Li Y, Bailes E, Bibollet-Ruche F, Fruteau C, Noë R, Peeters M, Brookfield JF, Shaw GM, Sharp PM, Hahn BH. Simian immunodeficiency virus infection in free-ranging sooty mangabeys (Cercocebus atys atys) from the Taï Forest, Côte d'Ivoire: implications for the origin of epidemic human immunodeficiency virus type 2. Journal of Virology. 79: 12515-27. PMID 16160179 DOI: 10.1128/Jvi.79.19.12515-12527.2005 |
0.37 |
|
| 2005 |
Sharp PM, Shaw GM, Hahn BH. Simian immunodeficiency virus infection of chimpanzees Journal of Virology. 79: 3891-3902. PMID 15767392 DOI: 10.1128/Jvi.79.7.3891-3902.2005 |
0.307 |
|
| 2005 |
Sharp PM, Bailes E, Grocock RJ, Peden JF, Sockett RE. Variation in the strength of selected codon usage bias among bacteria Nucleic Acids Research. 33: 1141-1153. PMID 15728743 DOI: 10.1093/Nar/Gki242 |
0.395 |
|
| 2005 |
Sharp PM. Gene "volatility" is most unlikely to reveal adaptation Molecular Biology and Evolution. 22: 807-809. PMID 15616138 DOI: 10.1093/Molbev/Msi073 |
0.402 |
|
| 2005 |
Nerrienet E, Santiago ML, Foupouapouognigni Y, Bailes E, Mundy NI, Njinku B, Kfutwah A, Muller-Trutwin MC, Barre-Sinoussi F, Shaw GM, Sharp PM, Hahn BH, Ayouba A. Simian immunodeficiency virus infection in wild-caught chimpanzees from Cameroon Journal of Virology. 79: 1312-1319. PMID 15613358 DOI: 10.1128/Jvi.79.2.1312-1319.2005 |
0.364 |
|
| 2004 |
Bibollet-Ruche F, Gao F, Bailes E, Saragosti S, Delaporte E, Peeters M, Shaw GM, Hahn BH, Sharp PM. Complete genome analysis of one of the earliest SIVcpzPtt strains from gabon (SIVcpzGAB2) Aids Research and Human Retroviruses. 20: 1377-1381. PMID 15650433 DOI: 10.1089/Aid.2004.20.1377 |
0.4 |
|
| 2004 |
Chen Y, Sharp PM, Fowkes M, Kocher O, Joseph JT, Koralnik IJ. Analysis of 15 novel full-length BK virus sequences from three individuals: evidence of a high intra-strain genetic diversity. The Journal of General Virology. 85: 2651-63. PMID 15302959 DOI: 10.1099/Vir.0.79920-0 |
0.403 |
|
| 2004 |
Bibollet-Ruche F, Bailes E, Gao F, Pourrut X, Barlow KL, Clewley JP, Mwenda JM, Langat DK, Chege GK, McClure HM, Mpoudi-Ngole E, Delaporte E, Peeters M, Shaw GM, Sharp PM, et al. New simian immunodeficiency virus infecting De Brazza's monkeys (Cercopithecus neglectus): Evidence for a Cercopithecus monkey virus clade Journal of Virology. 78: 7748-7762. PMID 15220449 DOI: 10.1128/Jvi.78.14.7748-7762.2004 |
0.422 |
|
| 2004 |
Worobey M, Santiago ML, Keele BF, Ndjango JBN, Joy JB, Labama BL, Dhed'a BD, Rambaut A, Sharp PM, Shaw GM, Hahn BH. Contaminated polio vaccine theory refuted Nature. 428: 820. PMID 15103367 DOI: 10.1038/428820A |
0.306 |
|
| 2003 |
Santiago ML, Bibollet-Ruche F, Gross-Camp N, Majewski AC, Masozera M, Munanura I, Kaplin BA, Sharp PM, Shaw GM, Hahn BH. Noninvasive Detection of Simian Immunodeficiency Virus Infection in a Wild-Living L'Hoest's Monkey (Cercopithecus lhoesti) Aids Research and Human Retroviruses. 19: 1163-1166. PMID 14717118 DOI: 10.1089/088922203771881275 |
0.333 |
|
| 2003 |
Van Gent D, Sharp P, Morgan K, Kalsheker N. Serpins: Structure, function and molecular evolution International Journal of Biochemistry and Cell Biology. 35: 1536-1547. PMID 12824063 DOI: 10.1016/S1357-2725(03)00134-1 |
0.342 |
|
| 2003 |
Bailes E, Gao F, Bibollet-Ruche F, Courgnaud V, Peeters M, Marx PA, Hahn BH, Sharp PM. Hybrid origin of SIV in chimpanzees Science. 300: 1713. PMID 12805540 DOI: 10.1126/Science.1080657 |
0.352 |
|
| 2003 |
Santiago ML, Lukasik M, Kamenya S, Li Y, Bibollet-Ruche F, Bailes E, Muller MN, Emery M, Goldenberg DA, Lwanga JS, Ayouba A, Nerrienet E, McClure HM, Heeney JL, Watts DP, ... ... Sharp PM, et al. Foci of endemic simian immunodeficiency virus infection in wild-living eastern chimpanzees (Pan troglodytes schweinfurthii). Journal of Virology. 77: 7545-62. PMID 12805455 DOI: 10.1128/Jvi.77.13.7545-7562.2003 |
0.321 |
|
| 2003 |
Santiago ML, Bibollet-Ruche F, Bailes E, Kamenya S, Muller MN, Lukasik M, Pusey AE, Collins DA, Wrangham RW, Goodall J, Shaw GM, Sharp PM, Hahn BH. Amplification of a complete simian immunodeficiency virus genome from fecal RNA of a wild chimpanzee. Journal of Virology. 77: 2233-42. PMID 12525658 DOI: 10.1128/Jvi.77.3.2233-2242.2003 |
0.417 |
|
| 2003 |
Markine-Goriaynoff N, Georgin JP, Goltz M, Zimmermann W, Broll H, Wamwayi HM, Pastoret PP, Sharp PM, Vanderplasschen A. The core 2 β-1,6-N-acetylglucosaminyltransferase-mucin encoded by bovine herpesvirus 4 was acquired from an ancestor of the African buffalo Journal of Virology. 77: 1784-1792. PMID 12525612 DOI: 10.1128/Jvi.77.3.1784-1792.2003 |
0.436 |
|
| 2002 |
Grocock RJ, Sharp PM. Synonymous codon usage in Pseudomonas aeruginosa PA01 Gene. 289: 131-139. PMID 12036591 DOI: 10.1016/S0378-1119(02)00503-6 |
0.417 |
|
| 2002 |
Sharp PM. Origins of human virus diversity Cell. 108: 305-312. PMID 11853665 DOI: 10.1016/S0092-8674(02)00639-6 |
0.376 |
|
| 2002 |
Santiago ML, Rodenburg CM, Kamenya S, Bibollet-Ruche F, Gao F, Bailes E, Meleth S, Soong SJ, Kilby JM, Moldoveanu Z, Fahey B, Muller MN, Ayouba A, Nerrienet E, McClure HM, ... ... Sharp PM, et al. SIVcpz in wild chimpanzees. Science (New York, N.Y.). 295: 465. PMID 11799233 DOI: 10.1126/Science.295.5554.465 |
0.312 |
|
| 2001 |
Sharp PM, Bailes E, Chaudhuri RR, Rodenburg CM, Santiago MO, Hahn BH. The origins of acquired immune deficiency syndrome viruses: Where and when? Philosophical Transactions of the Royal Society B: Biological Sciences. 356: 867-876. PMID 11405934 DOI: 10.1098/Rstb.2001.0863 |
0.339 |
|
| 2001 |
Grocock RJ, Sharp PM. Synonymous codon usage in Cryptosporidium parvum: Identification of two distinct trends among genes International Journal For Parasitology. 31: 402-412. PMID 11306119 DOI: 10.1016/S0020-7519(01)00129-1 |
0.427 |
|
| 2000 |
Sharp PM, Bailes E, Gao F, Beer BE, Hirsch VM, Hahn BH. Origins and evolution of AIDS viruses: Estimating the time-scale Biochemical Society Transactions. 28: 275-282. PMID 10816142 DOI: 10.1042/Bst0280275 |
0.362 |
|
| 2000 |
Lafay B, Atherton JC, Sharp PM. Absence of translationally selected synonymous codon usage bias in Helicobacter pylori Microbiology. 146: 851-860. PMID 10784043 DOI: 10.1099/00221287-146-4-851 |
0.418 |
|
| 2000 |
Hatwell JN, Sharp PM. Evolution of human polyomavirus JC Journal of General Virology. 81: 1191-1200. PMID 10769060 DOI: 10.1099/0022-1317-81-5-1191 |
0.385 |
|
| 2000 |
Beer BE, Bailes E, Dapolito G, Campbell BJ, Goeken RM, Axthelm MK, Markham PD, Bernard J, Zagury D, Franchini G, Sharp PM, Hirsch VM. Patterns of genomic sequence diversity among their simian immunodeficiency viruses suggest that L'Hoest monkeys (Cercopithecus lhoesti) are a natural lentivirus reservoir Journal of Virology. 74: 3892-3898. PMID 10729165 DOI: 10.1128/Jvi.74.8.3892-3898.2000 |
0.383 |
|
| 2000 |
Averof M, Rokas A, Wolfe KH, Sharp PM. Evidence for a high frequency of simultaneous double-nucleotide substitutions. Science (New York, N.Y.). 287: 1283-6. PMID 10678838 DOI: 10.1126/Science.287.5456.1283 |
0.586 |
|
| 2000 |
Hahn BH, Shaw GM, De Cock KM, Sharp PM. AIDS as a zoonosis: Scientific and public health implications Science. 287: 607-614. PMID 10649986 DOI: 10.1126/Science.287.5453.607 |
0.314 |
|
| 1999 |
Lafay B, Sharp PM. Synonymous codon usage variation among Giardia lamblia genes and isolates Molecular Biology and Evolution. 16: 1484-1495. PMID 10555279 DOI: 10.1093/Oxfordjournals.Molbev.A026060 |
0.448 |
|
| 1999 |
Matassi G, Sharp PM, Gautier C. Chromosomal location effects on gene sequence evolution in mammals Current Biology. 9: 786-791. PMID 10469563 DOI: 10.1016/S0960-9822(99)80361-3 |
0.42 |
|
| 1999 |
Beer BE, Bailes E, Goeken R, Dapolito G, Coulibaly C, Norley SG, Kurth R, Gautier JP, Gautier-Hion A, Vallet D, Sharp PM, Hirsch VM. Simian immunodeficiency virus (SIV) from sun-tailed monkeys (Cercopithecus solatus): Evidence for host-dependent evolution of SIV within the C. lhoesti superspecies Journal of Virology. 73: 7734-7744. PMID 10438863 DOI: 10.1128/Jvi.73.9.7734-7744.1999 |
0.357 |
|
| 1999 |
Ball JK, Curran R, Berridge S, Grabowska AM, Jameson CL, Thomson BJ, Irving WL, Sharp PM. TT virus sequence heterogeneity in vivo: Evidence for co-infection with multiple genetic types Journal of General Virology. 80: 1759-1768. PMID 10423145 DOI: 10.1099/0022-1317-80-7-1759 |
0.355 |
|
| 1999 |
Sharp PM, Bailes E, Robertson DL, Gao F, Hahn BH. Origins and evolution of AIDS viruses. The Biological Bulletin. 196: 338-42. PMID 10390833 DOI: 10.2307/1542965 |
0.381 |
|
| 1999 |
Bradnam KR, Seoighe C, Sharp PM, Wolfe KH. G+C content variation along and among Saccharomyces cerevisiae chromosomes. Molecular Biology and Evolution. 16: 666-75. PMID 10335660 DOI: 10.1093/Oxfordjournals.Molbev.A026149 |
0.75 |
|
| 1999 |
Lafay B, Lloyd AT, McLean MJ, Devine KM, Sharp PM, Wolfe KH. Proteome composition and codon usage in spirochaetes: species-specific and DNA strand-specific mutational biases. Nucleic Acids Research. 27: 1642-9. PMID 10075995 DOI: 10.1093/Nar/27.7.1642 |
0.635 |
|
| 1999 |
Gao F, Balles E, Robertson DL, Chen Y, Rodenburg CM, Michael SF, Cummins LB, Arthur LO, Peeters M, Shaw GM, Sharp PM, Hahn BH. Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes Nature. 397: 436-441. PMID 9989410 DOI: 10.1038/17130 |
0.342 |
|
| 1999 |
Hirsch VM, Campbell BJ, Bailes E, Goeken R, Brown C, Elkins WR, Axthelm M, Murphey-Corb M, Sharp PM. Characterization of a novel simian immunodeficiency virus (SIV) from L'Hoest monkeys (Cercopithecus l'hoesti): Implications for the origins of SIVmnd and other primate lentiviruses Journal of Virology. 73: 1036-1045. PMID 9882304 DOI: 10.1128/Jvi.73.2.1036-1045.1999 |
0.348 |
|
| 1998 |
Gao F, Robertson DL, Carruthers CD, Li Y, Bailes E, Kostrikis LG, Salminen MO, Bibollet-Ruche F, Peeters M, Ho DD, Shaw GM, Sharp PM, Hahn BH. An isolate of human immunodeficiency virus type 1 originally classified as subtype I represents a complex mosaic comprising three different group M subtypes (A, G, and I) Journal of Virology. 72: 10234-10241. PMID 9811767 DOI: 10.1128/Jvi.72.12.10234-10241.1998 |
0.431 |
|
| 1998 |
Gao F, Robertson DL, Carruthers CD, Morrison SG, Jian B, Chen Y, Barré-Sinoussi F, Girard M, Srinivasan A, Abimiku AG, Shaw GM, Sharp PM, Hahn BH. A comprehensive panel of near-full-length clones and reference sequences for non-subtype B isolates of human immunodeficiency virus type 1 Journal of Virology. 72: 5680-5698. PMID 9621027 DOI: 10.1128/Jvi.72.7.5680-5698.1998 |
0.441 |
|
| 1998 |
Zhu T, Korber BT, Nahmias AJ, Hooper E, Sharp PM, Ho DD. An African HIV-1 sequence from 1959 and implications for the of the epidemic Nature. 391: 594-597. PMID 9468138 DOI: 10.1038/35400 |
0.362 |
|
| 1997 |
Sharp PM. Insertions within ERIC sequences [2] Molecular Microbiology. 24: 1314-1315. PMID 9218779 DOI: 10.1046/J.1365-2958.1997.4221767.X |
0.351 |
|
| 1997 |
Salminen MO, Carr JK, Robertson DL, Hegerich P, Gotte D, Koch C, Sanders-Buell E, Gao F, Sharp PM, Hahn BH, Burke DS, McCutchan FE. Evolution and probable transmission of intersubtype recombinant human immunodeficiency virus type 1 in a Zambian couple Journal of Virology. 71: 2647-2655. PMID 9060617 DOI: 10.1128/Jvi.71.4.2647-2655.1997 |
0.369 |
|
| 1997 |
Sharp PM. In search of molecular darwinism Nature. 385: 111. PMID 8990106 DOI: 10.1038/385111A0 |
0.307 |
|
| 1997 |
Sharp PM, Bradnam KR. Appendix 3 Codon Usage in C. elegans Cold Spring Harbor Monograph Archive. 33: 1053-1057. DOI: 10.1101/087969532.33.1053 |
0.449 |
|
| 1996 |
Sharp PM, Leach DRF. Palindrome-induced deletion in enterobacterial repetitive sequences Molecular Microbiology. 22: 1055-1056. PMID 8971725 DOI: 10.1046/J.1365-2958.1996.01546.X |
0.336 |
|
| 1996 |
Andersson GE, Sharp PM. Codon usage in the Mycobacterium tuberculosis complex. Microbiology (Reading, England). 142: 915-25. PMID 8936318 DOI: 10.1099/00221287-142-4-915 |
0.375 |
|
| 1996 |
Sharp PM, Smith MC. Identifying bacterial genes--a cautionary tale. Microbiology (Reading, England). 142: 717-8. PMID 8936300 DOI: 10.1099/00221287-142-4-717-A |
0.341 |
|
| 1996 |
Sharp PM, Bailes E, Stevenson M, Emerman M, Hahn BH. Gene acquisition in HIV and SIV. Nature. 383: 586-7. PMID 8857532 DOI: 10.1038/383586A0 |
0.337 |
|
| 1996 |
Gao F, Robertson DL, Morrison SG, Hui H, Craig S, Decker J, Fultz PN, Girard M, Shaw GM, Hahn BH, Sharp PM. The heterosexual human immunodeficiency virus type 1 epidemic in Thailand is caused by an intersubtype (A/E) recombinant of African origin Journal of Virology. 70: 7013-7029. PMID 8794346 DOI: 10.1128/Jvi.70.10.7013-7029.1996 |
0.391 |
|
| 1996 |
Andersson SGE, Sharp PM. Codon usage and base composition in Rickettsia prowazekii Journal of Molecular Evolution. 42: 525-536. PMID 8662004 DOI: 10.1007/Bf02352282 |
0.449 |
|
| 1996 |
Vanden Haesevelde MM, Peeters M, Jannes G, Janssens W, Van Der Groen G, Sharp PM, Saman E. Sequence analysis of a highly divergent HIV-1-related lentivirus isolated from a wild captured chimpanzee Virology. 221: 346-350. PMID 8661445 DOI: 10.1006/Viro.1996.0384 |
0.353 |
|
| 1996 |
Gao F, Morrison SG, Robertson DL, Thornton CL, Craig S, Karlsson G, Sodroski J, Morgado M, Galvao-Castro B, von Briesen H, Beddows S, Weber J, Sharp PM, Shaw GM, Hahn BH. Molecular cloning and analysis of functional envelope genes from human immunodeficiency virus type 1 sequence subtypes A through G. The WHO and NIAID Networks for HIV Isolation and Characterization. Journal of Virology. 70: 1651-67. PMID 8627686 DOI: 10.1128/Jvi.70.3.1651-1667.1996 |
0.443 |
|
| 1996 |
Biggar RJ, Taylor ME, Neel JV, Hjelle B, Levine PH, Black FL, Shaw GM, Sharp PM, Hahn BH. Genetic variants of human T-lymphotrophic virus type II in American Indian groups. Virology. 216: 165-73. PMID 8614983 DOI: 10.1006/Viro.1996.0043 |
0.332 |
|
| 1995 |
Sharp PM, Robertson DL, Hahn BH. Cross-species transmission and recombination of 'AIDS' viruses. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 349: 41-7. PMID 8748018 DOI: 10.1098/Rstb.1995.0089 |
0.382 |
|
| 1995 |
Sharp PM, Averof M, Lloyd AT, Matassi G, Peden JF. DNA sequence evolution: the sounds of silence. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 349: 241-7. PMID 8577834 DOI: 10.1098/Rstb.1995.0108 |
0.435 |
|
| 1995 |
Robertson DL, Hahn BH, Sharp PM. Recombination in AIDS viruses. Journal of Molecular Evolution. 40: 249-59. PMID 7723052 DOI: 10.1007/Bf00163230 |
0.367 |
|
| 1994 |
Loftus RT, MacHugh DE, Bradley DG, Sharp PM, Cunningham P. Evidence for two independent domestications of cattle Proceedings of the National Academy of Sciences of the United States of America. 91: 2757-2761. PMID 8146187 DOI: 10.1073/Pnas.91.7.2757 |
0.38 |
|
| 1994 |
Sharp PM. Identification of genes encoding ribosomal protein L33 from Bacillus licheniformis, Thermus thermophilus and Thermotoga maritima Gene. 139: 135-136. PMID 8112583 DOI: 10.1016/0378-1119(94)90537-1 |
0.389 |
|
| 1994 |
Stenico M, Lloyd AT, Sharp PM. Codon usage in Caenorhabditis elegans: Delineation of translational selection and mutational biases Nucleic Acids Research. 22: 2437-2446. PMID 8041603 DOI: 10.1093/Nar/22.13.2437 |
0.437 |
|
| 1994 |
Jin MJ, Hui H, Robertson DL, Müller MC, Barré-Sinoussi F, Hirsch VM, Allan JS, Shaw GM, Sharp PM, Hahn BH. Mosaic genome structure of simian immunodeficiency virus from West African green monkeys Embo Journal. 13: 2936-2947. PMID 8026477 DOI: 10.1002/J.1460-2075.1994.Tb06588.X |
0.425 |
|
| 1994 |
MacHugh DE, Loftus RT, Bradley DG, Sharp PM, Cunningham P. Microsatellite DNA variation within and among European cattle breeds Proceedings of the Royal Society B: Biological Sciences. 256: 25-31. PMID 8008754 DOI: 10.1098/Rspb.1994.0044 |
0.301 |
|
| 1994 |
Jin MJ, Rogers J, Phillips-Conroy JE, Allan JS, Desrosiers RC, Shaw GM, Sharp PM, Hahn BH. Infection of a yellow baboon with simian immunodeficiency virus from African green monkeys: evidence for cross-species transmission in the wild. Journal of Virology. 68: 8454-60. PMID 7966642 DOI: 10.1128/Jvi.68.12.8454-8460.1994 |
0.414 |
|
| 1994 |
Gao F, Yue L, Hill SC, Robertson DL, Graves AH, Saag MS, Shaw GM, Sharp PM, Hahn BH. HIV-1 sequence subtype D in the United States Aids Research and Human Retroviruses. 10: 625-627. PMID 7917525 DOI: 10.1089/Aid.1994.10.625 |
0.304 |
|
| 1994 |
Sharp PM, Matassi G. Codon usage and genome evolution. Current Opinion in Genetics & Development. 4: 851-60. PMID 7888755 DOI: 10.1016/0959-437X(94)90070-1 |
0.391 |
|
| 1994 |
Gao F, Yue L, Craig S, Thornton CL, Robertson DL, McCutchan FE, Bradac JA, Sharp PM, Hahn BH, Osmanov S, Belsey EM, Heyward W, Esparza J, Galvao-Castro B, Van de Perre P, et al. Genetic variation of HIV type 1 in four World Organization-sponsored vaccine evaluation sites: Generation of functional envelope (glycoprotein 160) clones representative of sequence subtypes A, B, C, and E Aids Research and Human Retroviruses. 10: 1359-1368. PMID 7888189 DOI: 10.1089/Aid.1994.10.1359 |
0.372 |
|
| 1993 |
Ghosh SK, Fultz PN, Keddie E, Saag MS, Sharp PM, Hahn BH, Shaw GM. A molecular clone of HIV-1 tropic and cytopathic for human and chimpanzee lymphocyes Virology. 194: 858-864. PMID 8503191 DOI: 10.1006/Viro.1993.1331 |
0.364 |
|
| 1993 |
Rubio N, Sharp PM, Rits M, Zahedi K, Whitehead AS. Structure, expression, and evolution of guinea pig serum amyloid P component and C-reactive protein Journal of Biochemistry. 113: 277-284. PMID 8486600 |
0.338 |
|
| 1993 |
Sharp PM, Lloyd AT. Regional base composition variation along yeast chromosome III: Evolution of chromosome primary structure Nucleic Acids Research. 21: 179-183. PMID 8441625 DOI: 10.1093/Nar/21.2.179 |
0.378 |
|
| 1993 |
Murray NE, Daniel AS, Cowan GM, Sharp PM. Conservation of motifs within the unusually variable polypeptide sequences of type I restriction and modification enzymes Molecular Microbiology. 9: 133-143. PMID 8412658 DOI: 10.1111/J.1365-2958.1993.Tb01675.X |
0.408 |
|
| 1993 |
Gao F, Yue L, Sharp PM, Hahn BH. Genetic typing of HIV-2 from a Senegalese/German heterosexual transmission Aids Research and Human Retroviruses. 9: 703-704. PMID 8369175 DOI: 10.1089/Aid.1993.9.703 |
0.372 |
|
| 1993 |
Sharp PM, Wolfe KH. Identification of a Candida utilis gene encoding ribosomal protein L7: evidence for two divergent subclasses of the eukaryotic ribosomal protein L7 family. Nucleic Acids Research. 21: 3577. PMID 8346035 DOI: 10.1093/Nar/21.15.3577 |
0.535 |
|
| 1993 |
Wolfe KH, Sharp PM. Mammalian gene evolution: nucleotide sequence divergence between mouse and rat. Journal of Molecular Evolution. 37: 441-56. PMID 8308912 DOI: 10.1007/Bf00178874 |
0.652 |
|
| 1993 |
Lloyd AT, Sharp PM. Evolution of the recA gene and the molecular phylogeny of bacteria Journal of Molecular Evolution. 37: 399-407. PMID 8308907 DOI: 10.1007/Bf00178869 |
0.448 |
|
| 1993 |
Seery LT, Nolan NC, Sharp PM, Devine KM. Comparative analysis of the pC194 group of rolling circle plasmids Plasmid. 30: 185-196. PMID 8302927 DOI: 10.1006/Plas.1993.1051 |
0.356 |
|
| 1993 |
Lloyd AT, Sharp PM. Synonymous codon usage in Kluyveromyces lactis Yeast. 9: 1219-1228. PMID 8109171 DOI: 10.1002/Yea.320091109 |
0.425 |
|
| 1992 |
Gao F, Yue L, White AT, Pappas PG, Barchue J, Hanson AP, Greene BM, Sharp PM, Shaw GM, Hahn BH. Human infection by genetically diverse SIVSM-related HIV-2 in West Africa Nature. 358: 495-499. PMID 1641038 DOI: 10.1038/358495A0 |
0.37 |
|
| 1992 |
Sharp PM, Nolan NC, Ni Cholmain N, Devine KM. DNA sequence variability at the rplX locus of Bacillus subtilis Journal of General Microbiology. 138: 39-45. PMID 1556555 DOI: 10.1099/00221287-138-1-39 |
0.38 |
|
| 1992 |
Lloyd AT, Sharp PM. Evolution of codon usage patterns: The extent and nature of divergence between Candida albicans and Saccharomyces cerevisiae Nucleic Acids Research. 20: 5289-5295. PMID 1437548 DOI: 10.1093/Nar/20.20.5289 |
0.425 |
|
| 1992 |
Shields DC, Higgins DG, Sharp PM. GCWIND: a microcomputer program for identifying open reading frames according to codon positional G+C content. Computer Applications in the Biosciences : Cabios. 8: 521-3. PMID 1422886 DOI: 10.1093/Bioinformatics/8.5.521 |
0.645 |
|
| 1992 |
Sharp PM, Kelleher JE, Daniel AS, Cowan GM, Murray NE. Roles of selection and recombination in the evolution of type I restriction-modification systems in enterobacteria Proceedings of the National Academy of Sciences of the United States of America. 89: 9836-9840. PMID 1409708 DOI: 10.1073/Pnas.89.20.9836 |
0.429 |
|
| 1992 |
Li Y, Hui H, Burgess CJ, Price RW, Sharp PM, Hahn BH, Shaw GM. Complete nucleotide sequence, genome organization, and biological properties of human immunodeficiency virus type 1 in vivo: evidence for limited defectiveness and complementation. Journal of Virology. 66: 6587-600. PMID 1404605 DOI: 10.1128/Jvi.66.11.6587-6600.1992 |
0.379 |
|
| 1991 |
Bulmer M, Wolfe KH, Sharp PM. Synonymous nucleotide substitution rates in mammalian genes: implications for the molecular clock and the relationship of mammalian orders. Proceedings of the National Academy of Sciences of the United States of America. 88: 5974-8. PMID 2068073 DOI: 10.1073/Pnas.88.14.5974 |
0.625 |
|
| 1991 |
Nigro L, Solignac M, Sharp PM. Mitochondrial DNA sequence divergence in the Melanogaster and oriental species subgroups of Drosophila Journal of Molecular Evolution. 33: 156-162. PMID 1920452 DOI: 10.1007/Bf02193630 |
0.456 |
|
| 1991 |
Powell R, Higgins DG, Wolff J, Byrnes L, Stack M, Sharp PM, Gannon F. The salmon gene encoding apolipoprotein A-I: cDNA sequence, tissue expression and evolution. Gene. 104: 155-61. PMID 1916288 DOI: 10.1016/0378-1119(91)90245-7 |
0.581 |
|
| 1991 |
Sharp PM. Determinants of DNA sequence divergence between Escherichia coli and Salmonella typhimurium: Codon usage, map position, and concerted evolution Journal of Molecular Evolution. 33: 23-33. PMID 1909371 DOI: 10.1007/Bf02100192 |
0.454 |
|
| 1991 |
Sharp PM, Cowe E. Synonymous codon usage in Saccharomyces cerevisiae Yeast. 7: 657-678. PMID 1776357 DOI: 10.1002/Yea.320070702 |
0.362 |
|
| 1991 |
Lloyd AT, Sharp PM. Codon usage in Aspergillus nidulans Mgg Molecular & General Genetics. 230: 288-294. PMID 1745237 DOI: 10.1007/Bf00290679 |
0.423 |
|
| 1991 |
Hulton CSJ, Higgins CF, Sharp PM. ERIC sequences: A novel family of repetitive elements in the genomes of Escherichia coli, Salmonella typhimurium and other enterobacteria Molecular Microbiology. 5: 825-834. PMID 1713281 DOI: 10.1111/J.1365-2958.1991.Tb00755.X |
0.397 |
|
| 1991 |
Cowe E, Sharp PM. Molecular evolution of bacteriophages: Discrete patterns of codon usage in T4 genes are related to the time of gene expression Journal of Molecular Evolution. 33: 13-22. DOI: 10.1007/Bf02100191 |
0.372 |
|
| 1990 |
Li WH, Gouy M, Sharp PM, O'hUigin C, Yang YW. Molecular phylogeny of Rodentia, Lagomorpha, Primates, Artiodactyla, and Carnivora and molecular clocks. Proceedings of the National Academy of Sciences of the United States of America. 87: 6703-7. PMID 2395871 DOI: 10.1073/Pnas.87.17.6703 |
0.379 |
|
| 1990 |
Sharp PM. Processes of genome evolution reflected by base frequency differences among Serratia marcescens genes Molecular Microbiology. 4: 119-122. PMID 2181232 DOI: 10.1111/J.1365-2958.1990.Tb02020.X |
0.418 |
|
| 1990 |
Atkins GJ, Daly EA, Sheahan BJ, Higgins DG, Sharp PM. Multiple sclerosis and molecular mimicry. Neuropathology and Applied Neurobiology. 16: 179-80. PMID 1693178 DOI: 10.1111/J.1365-2990.1990.Tb00946.X |
0.458 |
|
| 1990 |
Sharp PM, Higgins DG, Shields DC, Devine KM, Hoch JA. Bacillus Subtilis Gene Sequences Genetics and Biotechnology of Bacilli. 89-98. DOI: 10.1016/B978-0-12-274162-3.50013-X |
0.605 |
|
| 1989 |
Wolfe KH, Sharp PM, Li WH. Mutation rates differ among regions of the mammalian genome. Nature. 337: 283-5. PMID 2911369 DOI: 10.1038/337283A0 |
0.619 |
|
| 1989 |
Wolfe KH, Gouy M, Yang YW, Sharp PM, Li WH. Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data. Proceedings of the National Academy of Sciences of the United States of America. 86: 6201-5. PMID 2762323 DOI: 10.1073/Pnas.86.16.6201 |
0.589 |
|
| 1989 |
Sharp PM, Devine KM. Codon usage and gene expression level in Dictyosteiium discoidtum: Highly expressed genes do [prefer[ optimal codons Nucleic Acids Research. 17: 5029-5040. PMID 2762118 DOI: 10.1093/Nar/17.13.5029 |
0.417 |
|
| 1989 |
Higgins DG, Sharp PM. Fast and sensitive multiple sequence alignments on a microcomputer. Computer Applications in the Biosciences : Cabios. 5: 151-3. PMID 2720464 DOI: 10.1093/Bioinformatics/5.2.151 |
0.56 |
|
| 1989 |
Sharp PM, Shields DC, Wolfe KH, Li WH. Chromosomal location and evolutionary rate variation in enterobacterial genes. Science (New York, N.Y.). 246: 808-10. PMID 2683084 DOI: 10.1126/Science.2683084 |
0.703 |
|
| 1989 |
Higgins DG, McConnell DJ, Sharp PM. Malarial proteinase? Nature. 340: 604. PMID 2671749 DOI: 10.1038/340604a0 |
0.404 |
|
| 1989 |
Shields DC, Sharp PM. Evidence that mutation patterns vary among Drosophila transposable elements. Journal of Molecular Biology. 207: 843-6. PMID 2547975 DOI: 10.1016/0022-2836(89)90252-0 |
0.584 |
|
| 1989 |
Sharp PM, Li WH. On the rate of DNA sequence evolution in Drosophila Journal of Molecular Evolution. 28: 398-402. PMID 2501501 DOI: 10.1007/Bf02603075 |
0.411 |
|
| 1989 |
Wolfe KH, Sharp PM, Li WH. Rates of synonymous substitution in plant nuclear genes Journal of Molecular Evolution. 29: 208-211. DOI: 10.1007/Bf02100204 |
0.578 |
|
| 1989 |
Li WH, Gouy M, Wolfe KH, Sharp PM. Angiosperm origins [9] Nature. 342: 131-132. |
0.485 |
|
| 1988 |
Li WH, Tanimura M, Sharp PM. Rates and dates of divergence between AIDS virus nucleotide sequences Molecular Biology and Evolution. 5: 313-330. PMID 3405075 DOI: 10.1093/Oxfordjournals.Molbev.A040503 |
0.393 |
|
| 1988 |
Higgins DG, Sharp PM. CLUSTAL: a package for performing multiple sequence alignment on a microcomputer. Gene. 73: 237-44. PMID 3243435 DOI: 10.1016/0378-1119(88)90330-7 |
0.554 |
|
| 1988 |
Wolfe KH, Sharp PM. Identification of functional open reading frames in chloroplast genomes. Gene. 66: 215-22. PMID 3169573 DOI: 10.1016/0378-1119(88)90358-7 |
0.635 |
|
| 1988 |
Shields DC, Sharp PM, Higgins DG, Wright F. "Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons. Molecular Biology and Evolution. 5: 704-16. PMID 3146682 DOI: 10.1093/Oxfordjournals.Molbev.A040525 |
0.698 |
|
| 1988 |
Sharp PM, Cowe E, Higgins DG, Shields DC, Wolfe KH, Wright F. Codon usage patterns in Escherichia coli, Bacillus subtilis, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Drosophila melanogaster and Homo sapiens; a review of the considerable within-species diversity. Nucleic Acids Research. 16: 8207-11. PMID 3138659 DOI: 10.1093/Nar/16.17.8207 |
0.742 |
|
| 1988 |
Sharp PM, Bulmer M. Selective differences among translation termination codons Gene. 63: 141-145. PMID 3133285 DOI: 10.1016/0378-1119(88)90553-7 |
0.391 |
|
| 1987 |
Sharp PM, Li WH. The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications Nucleic Acids Research. 15: 1281-1295. PMID 3547335 DOI: 10.1093/Nar/15.3.1281 |
0.379 |
|
| 1987 |
Wolfe KH, Li WH, Sharp PM. Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs. Proceedings of the National Academy of Sciences of the United States of America. 84: 9054-8. PMID 3480529 DOI: 10.1073/Pnas.84.24.9054 |
0.572 |
|
| 1987 |
Li WH, Wolfe KH, Sourdis J, Sharp PM. Reconstruction of phylogenetic trees and estimation of divergence times under nonconstant rates of evolution. Cold Spring Harbor Symposia On Quantitative Biology. 52: 847-56. PMID 3454293 DOI: 10.1101/Sqb.1987.052.01.092 |
0.54 |
|
| 1987 |
Sharp PM, Li WH. The Rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias Molecular Biology and Evolution. 4: 222-230. PMID 3328816 DOI: 10.1093/Oxfordjournals.Molbev.A040443 |
0.428 |
|
| 1987 |
Shields DC, Sharp PM. Synonymous codon usage in Bacillus subtilis reflects both translational selection and mutational biases. Nucleic Acids Research. 15: 8023-40. PMID 3118331 DOI: 10.1093/Nar/15.19.8023 |
0.595 |
|
| 1987 |
Li WH, Tanimura M, Sharp PM. An evaluation of the molecular clock hypothesis using mammalian DNA sequences Journal of Molecular Evolution. 25: 330-342. PMID 3118047 DOI: 10.1007/Bf02603118 |
0.355 |
|
| 1987 |
Sharp PM, Li WH. Ubiquitin genes as a paradigm of concerted evolution of tandem repeats Journal of Molecular Evolution. 25: 58-64. PMID 3041010 DOI: 10.1007/Bf02100041 |
0.443 |
|
| 1987 |
Sharp PM, Li WH. Molecular evolution of ubiquitin genes Trends in Ecology and Evolution. 2: 328-332. DOI: 10.1016/0169-5347(87)90108-X |
0.349 |
|
| 1986 |
Sharp PM, Li WH. Codon usage in regulatory genes in Escherichia coli does not reflect selection for 'rare' codons Nucleic Acids Research. 14: 7737-7749. PMID 3534792 DOI: 10.1093/Nar/14.19.7737 |
0.405 |
|
| 1986 |
Sharp PM, Tuohy TMF, Mosurski KR. Codon usage in yeast: Cluster analysis clearly differentiates highly and lowly expressed genes Nucleic Acids Research. 14: 5125-5143. PMID 3526280 DOI: 10.1093/Nar/14.13.5125 |
0.391 |
|
| 1986 |
Sharp PM, Li WH. An evolutionary perspective on synonymous codon usage in unicellular organisms Journal of Molecular Evolution. 24: 28-38. PMID 3104616 DOI: 10.1007/Bf02099948 |
0.408 |
|
| 1986 |
Sharp PM. Molecular evolution of bacteriophages: Evidence of selection against the recognition sites of host restriction enzymes Molecular Biology and Evolution. 3: 75-83. PMID 2832688 DOI: 10.1093/Oxfordjournals.Molbev.A040377 |
0.367 |
|
| 1985 |
Sharp PM, Rogers MS, McConnell DJ. Selection pressures on codon usage in the complete genome of bacteriophage T7 Journal of Molecular Evolution. 21: 150-160. PMID 6100189 DOI: 10.1007/Bf02100089 |
0.422 |
|
| 1985 |
Sharp PM. Does the 'non-coding' strand code? Nucleic Acids Research. 13: 1389-1397. PMID 3889840 DOI: 10.1093/Nar/13.4.1389 |
0.357 |
|
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