James P. Haseloff, Ph.D. - Publications

Affiliations: 
1985-1989 Plant Biology CSIRO Australia 
 1999- Plant Biology University of Cambridge, Cambridge, England, United Kingdom 
Area:
Synthetic Plant Biology
Website:
http://data.plantsci.cam.ac.uk/Haseloff/

65 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Sauret-Güeto S, Frangedakis E, Silvestri L, Rebmann M, Tomaselli M, Markel K, Delmans M, West A, Patron NJ, Haseloff J. Systematic Tools for Reprogramming Plant Gene Expression in a Simple Model, . Acs Synthetic Biology. PMID 32163700 DOI: 10.1021/Acssynbio.9B00511  0.401
2018 Pollak B, Cerda A, Delmans M, Álamos S, Moyano T, West A, Gutiérrez RA, Patron N, Federici F, Haseloff J. Loop assembly: a simple and open system for recursive fabrication of DNA circuits. The New Phytologist. PMID 30521109 DOI: 10.1111/Nph.15625  0.695
2018 Kan A, Del Valle I, Rudge T, Federici F, Haseloff J. Intercellular adhesion promotes clonal mixing in growing bacterial populations. Journal of the Royal Society, Interface. 15. PMID 30232243 DOI: 10.1098/Rsif.2018.0406  0.709
2018 Yu Z, Boehm CR, Hibberd JM, Abell C, Haseloff J, Burgess SJ, Reyna-Llorens I. Droplet-based microfluidic analysis and screening of single plant cells. Plos One. 13: e0196810. PMID 29723275 DOI: 10.1371/Journal.Pone.0196810  0.42
2018 Boehm CR, Grant PK, Haseloff J. Programmed hierarchical patterning of bacterial populations. Nature Communications. 9: 776. PMID 29472537 DOI: 10.1038/S41467-018-03069-3  0.354
2017 Bowman JL, Kohchi T, Yamato KT, Jenkins J, Shu S, Ishizaki K, Yamaoka S, Nishihama R, Nakamura Y, Berger F, Adam C, Aki SS, Althoff F, Araki T, Arteaga-Vazquez MA, ... ... Haseloff J, et al. Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome. Cell. 171: 287-304.e15. PMID 28985561 DOI: 10.1016/J.Cell.2017.09.030  0.356
2016 Nuñez IN, Matute TF, Del Valle I, Kan A, Choksi A, Endy D, Haseloff J, Rudge T, Federici F. Artificial symmetry-breaking for morphogenetic engineering bacterial colonies. Acs Synthetic Biology. PMID 27794593 DOI: 10.1021/Acssynbio.6B00149  0.719
2016 Grant PK, Dalchau N, Brown JR, Federici F, Rudge TJ, Yordanov B, Patange O, Phillips A, Haseloff J. Orthogonal intercellular signaling for programmed spatial behavior. Molecular Systems Biology. 12: 849. PMID 26814193 DOI: 10.15252/Msb.20156590  0.709
2016 Boehm CR, Ueda M, Nishimura Y, Shikanai T, Haseloff J. A Cyan Fluorescent Reporter Expressed from the Chloroplast Genome of Marchantia polymorpha. Plant & Cell Physiology. 57: 291-9. PMID 26634291 DOI: 10.1093/Pcp/Pcv160  0.367
2015 Rudge TJ, Brown JR, Federici F, Dalchau N, Phillips A, Ajioka JW, Haseloff J. Characterization of intrinsic properties of promoters. Acs Synthetic Biology. PMID 26436725 DOI: 10.1021/Acssynbio.5B00116  0.723
2015 Patron NJ, Orzaez D, Marillonnet S, Warzecha H, Matthewman C, Youles M, Raitskin O, Leveau A, Farré G, Rogers C, Smith A, Hibberd J, Webb AA, Locke J, Schornack S, ... ... Haseloff J, et al. Standards for plant synthetic biology: a common syntax for exchange of DNA parts. The New Phytologist. PMID 26171760 DOI: 10.1111/Nph.13532  0.349
2013 Federici F, Rudge TJ, Pollak B, Haseloff J, Gutiérrez RA. Synthetic Biology: opportunities for Chilean bioindustry and education. Biological Research. 46: 383-93. PMID 24510141 DOI: 10.4067/S0716-97602013000400010  0.694
2013 Rudge TJ, Federici F, Steiner PJ, Kan A, Haseloff J. Cell polarity-driven instability generates self-organized, fractal patterning of cell layers. Acs Synthetic Biology. 2: 705-14. PMID 23688051 DOI: 10.1021/Sb400030P  0.725
2012 Rudge TJ, Steiner PJ, Phillips A, Haseloff J. Computational modeling of synthetic microbial biofilms. Acs Synthetic Biology. 1: 345-52. PMID 23651288 DOI: 10.1021/Sb300031N  0.325
2012 Wenzel CL, Marrison J, Mattsson J, Haseloff J, Bougourd SM. Ectopic divisions in vascular and ground tissues of Arabidopsis thaliana result in distinct leaf venation defects Journal of Experimental Botany. 63: 5351-5364. PMID 22936832 DOI: 10.1093/Jxb/Ers196  0.333
2012 Federici F, Dupuy L, Laplaze L, Heisler M, Haseloff J. Integrated genetic and computation methods for in planta cytometry. Nature Methods. 9: 483-5. PMID 22466793 DOI: 10.1038/Nmeth.1940  0.743
2012 Aquea F, Federici F, Moscoso C, Vega A, Jullian P, Haseloff J, Arce-Johnson P. A molecular framework for the inhibition of Arabidopsis root growth in response to boron toxicity. Plant, Cell & Environment. 35: 719-34. PMID 21988710 DOI: 10.1111/J.1365-3040.2011.02446.X  0.732
2011 Maizel A, von Wangenheim D, Federici F, Haseloff J, Stelzer EH. High-resolution live imaging of plant growth in near physiological bright conditions using light sheet fluorescence microscopy. The Plant Journal : For Cell and Molecular Biology. 68: 377-85. PMID 21711399 DOI: 10.1111/J.1365-313X.2011.04692.X  0.732
2010 Dupuy L, Mackenzie J, Haseloff J. Coordination of plant cell division and expansion in a simple morphogenetic system. Proceedings of the National Academy of Sciences of the United States of America. 107: 2711-6. PMID 20133808 DOI: 10.1073/Pnas.0906322107  0.426
2009 Møller IS, Gilliham M, Jha D, Mayo GM, Roy SJ, Coates JC, Haseloff J, Tester M. Shoot Na+ exclusion and increased salinity tolerance engineered by cell type-specific alteration of Na+ transport in Arabidopsis. The Plant Cell. 21: 2163-78. PMID 19584143 DOI: 10.1105/Tpc.108.064568  0.696
2009 Ubeda-Tomás S, Federici F, Casimiro I, Beemster GT, Bhalerao R, Swarup R, Doerner P, Haseloff J, Bennett MJ. Gibberellin signaling in the endodermis controls Arabidopsis root meristem size. Current Biology : Cb. 19: 1194-9. PMID 19576770 DOI: 10.1016/J.Cub.2009.06.023  0.729
2009 Gardner MJ, Baker AJ, Assie JM, Poethig RS, Haseloff JP, Webb AA. GAL4 GFP enhancer trap lines for analysis of stomatal guard cell development and gene expression. Journal of Experimental Botany. 60: 213-26. PMID 19033548 DOI: 10.1093/Jxb/Ern292  0.36
2008 Willemsen V, Bauch M, Bennett T, Campilho A, Wolkenfelt H, Xu J, Haseloff J, Scheres B. The NAC domain transcription factors FEZ and SOMBRERO control the orientation of cell division plane in Arabidopsis root stem cells. Developmental Cell. 15: 913-22. PMID 19081078 DOI: 10.1016/J.Devcel.2008.09.019  0.393
2008 Truernit E, Haseloff J. A simple way to identify non-viable cells within living plant tissue using confocal microscopy. Plant Methods. 4: 15. PMID 18573203 DOI: 10.1186/1746-4811-4-15  0.365
2008 Truernit E, Haseloff J. Arabidopsis thaliana outer ovule integument morphogenesis: ectopic expression of KNAT1 reveals a compensation mechanism. Bmc Plant Biology. 8: 35. PMID 18410683 DOI: 10.1186/1471-2229-8-35  0.33
2008 Parizot B, Laplaze L, Ricaud L, Boucheron-Dubuisson E, Bayle V, Bonke M, De Smet I, Poethig SR, Helariutta Y, Haseloff J, Chriqui D, Beeckman T, Nussaume L. Diarch symmetry of the vascular bundle in Arabidopsis root encompasses the pericycle and is reflected in distich lateral root initiation. Plant Physiology. 146: 140-8. PMID 17993548 DOI: 10.1104/Pp.107.107870  0.363
2008 Dupuy L, Mackenzie J, Rudge T, Haseloff J. A system for modelling cell-cell interactions during plant morphogenesis. Annals of Botany. 101: 1255-65. PMID 17921524 DOI: 10.1093/Aob/Mcm235  0.349
2007 Truernit E, Haseloff J. A Role for KNAT Class II Genes in Root Development. Plant Signaling & Behavior. 2: 10-2. PMID 19704797 DOI: 10.4161/Psb.2.1.3604  0.387
2007 Bernhardt K, Carter EJ, Chand NS, Lee J, Xu Y, Zhu X, Ajioka JW, Goncalves JM, Haseloff J, Micklem G, Rowe D. New tools for self-organised pattern formation Iet Synthetic Biology. 1: 29-31. DOI: 10.1049/Iet-Stb:20070020  0.345
2006 Truernit E, Siemering KR, Hodge S, Grbic V, Haseloff J. A map of KNAT gene expression in the Arabidopsis root. Plant Molecular Biology. 60: 1-20. PMID 16463096 DOI: 10.1007/S11103-005-1673-9  0.779
2006 Coates JC, Laplaze L, Haseloff J. Armadillo-related proteins promote lateral root development in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 103: 1621-6. PMID 16434475 DOI: 10.1073/Pnas.0507575103  0.71
2006 Haseloff J, Siemering KR. The uses of green fluorescent protein in plants. Methods of Biochemical Analysis. 47: 259-84. PMID 16335717 DOI: 10.1002/0471739499.Ch12  0.755
2005 Swarup R, Kramer EM, Perry P, Knox K, Leyser HM, Haseloff J, Beemster GT, Bhalerao R, Bennett MJ. Root gravitropism requires lateral root cap and epidermal cells for transport and response to a mobile auxin signal. Nature Cell Biology. 7: 1057-65. PMID 16244669 DOI: 10.1038/Ncb1316  0.393
2005 Laplaze L, Parizot B, Baker A, Ricaud L, Martinière A, Auguy F, Franche C, Nussaume L, Bogusz D, Haseloff J. GAL4-GFP enhancer trap lines for genetic manipulation of lateral root development in Arabidopsis thaliana Journal of Experimental Botany. 56: 2433-2442. PMID 16043452 DOI: 10.1093/Jxb/Eri236  0.405
2005 Ingouff M, Haseloff J, Berger F. Polycomb group genes control developmental timing of endosperm. The Plant Journal : For Cell and Molecular Biology. 42: 663-74. PMID 15918881 DOI: 10.1111/J.1365-313X.2005.02404.X  0.341
2005 Kurup S, Runions J, Köhler U, Laplaze L, Hodge S, Haseloff J. Marking cell lineages in living tissues. The Plant Journal : For Cell and Molecular Biology. 42: 444-53. PMID 15842628 DOI: 10.1111/J.1365-313X.2005.02386.X  0.766
2005 Johnson AA, Hibberd JM, Gay C, Essah PA, Haseloff J, Tester M, Guiderdoni E. Spatial control of transgene expression in rice (Oryza sativa L.) using the GAL4 enhancer trapping system. The Plant Journal : For Cell and Molecular Biology. 41: 779-89. PMID 15703064 DOI: 10.1111/J.1365-313X.2005.02339.X  0.39
2003 Svistoonoff S, Laplaze L, Auguy F, Runions J, Duponnois R, Haseloff J, Franche C, Bogusz D. cg12 expression is specifically linked to infection of root hairs and cortical cells during Casuarina glauca and Allocasuarina verticillata actinorhizal nodule development Molecular Plant-Microbe Interactions. 16: 600-607. PMID 12848425 DOI: 10.1094/Mpmi.2003.16.7.600  0.377
2003 Haseloff J. Old botanical techniques for new microscopes. Biotechniques. 34: 1174-8, 1180, 1182. PMID 12813885 DOI: 10.2144/03346Bi01  0.348
2002 Ayre BG, Köhler U, Turgeon R, Haseloff J. Optimization of trans-splicing ribozyme efficiency and specificity by in vivo genetic selection. Nucleic Acids Research. 30: e141. PMID 12490732 DOI: 10.1093/Nar/Gnf141  0.745
2001 Boisnard-Lorig C, Colon-Carmona A, Bauch M, Hodge S, Doerner P, Bancharel E, Dumas C, Haseloff J, Berger F. Dynamic analyses of the expression of the histone::YFP fusion protein in Arabidopsis show that syncytial endosperm is divided in mitotic domains Plant Cell. 13: 495-509. PMID 11251092 DOI: 10.1105/Tpc.13.3.495  0.393
2000 Jensen RB, Lykke-Andersen K, Frandsen GI, Nielsen HB, Haseloff J, Jespersen HM, Mundy J, Skriver K. Promiscuous and specific phospholipid binding by domains in ZAC, a membrane-associated Arabidopsis protein with an ARF GAP zinc finger and a C2 domain. Plant Molecular Biology. 44: 799-814. PMID 11202441 DOI: 10.1023/A:1026509002161  0.305
2000 Bougourd S, Marrison J, Haseloff J. An aniline blue staining procedure for confocal microscopy and 3D imaging of normal and perturbed cellular phenotypes in mature Arabidopsis embryos Plant Journal. 24: 543-550. PMID 11115135 DOI: 10.1046/J.1365-313X.2000.00892.X  0.317
2000 Kiegle E, Moore CA, Haseloff J, Tester MA, Knight MR. Cell-type-specific calcium responses to drought, salt and cold in the Arabidopsis root. The Plant Journal : For Cell and Molecular Biology. 23: 267-78. PMID 10929120 DOI: 10.1046/J.1365-313X.2000.00786.X  0.332
2000 Kiegle E, Gilliham M, Haseloff J, Tester M. Hyperpolarisation-activated calcium currents found only in cells from the elongation zone of Arabidopsis thaliana roots. Plant Journal. 21: 225-229. PMID 10743662 DOI: 10.1046/J.1365-313X.2000.00659.X  0.326
1999 Ayre BG, Köhler U, Goodman HM, Haseloff J. Design of highly specific cytotoxins by using trans-splicing ribozymes. Proceedings of the National Academy of Sciences of the United States of America. 96: 3507-12. PMID 10097066 DOI: 10.1073/Pnas.96.7.3507  0.699
1999 Köhler U, Ayre BG, Goodman HM, Haseloff J. Trans-splicing ribozymes for targeted gene delivery. Journal of Molecular Biology. 285: 1935-50. PMID 9925776 DOI: 10.1006/Jmbi.1998.2447  0.7
1998 Haseloff J. Gfp Variants For Multispectral Imaging Of Living Cells Methods in Cell Biology. 58: 139-151. PMID 9891379 DOI: 10.1016/S0091-679X(08)61953-6  0.376
1998 Schuldt AJ, Adams JH, Davidson CM, Micklem DR, Haseloff J, St Johnston D, Brand AH. Miranda mediates asymmetric protein and RNA localization in the developing nervous system. Genes & Development. 12: 1847-57. PMID 9637686 DOI: 10.1101/Gad.12.12.1847  0.355
1998 Berger F, Haseloff J, Schiefelbein J, Dolan L. Positional information in root epidermis is defined during embryogenesis and acts in domains with strict boundaries. Current Biology. 8: 421-430. PMID 9550701 DOI: 10.1016/S0960-9822(98)70176-9  0.345
1998 Berger F, Linstead P, Dolan L, Haseloff J. Stomata patterning on the hypocotyl of Arabidopsis thaliana is controlled by genes involved in the control of root epidermis patterning. Developmental Biology. 194: 226-34. PMID 9501031 DOI: 10.1006/Dbio.1997.8836  0.355
1997 Haseloff J, Siemering KR, Prasher DC, Hodge S. Removal of a cryptic intron and subcellular localization of green fluorescent protein are required to mark transgenic Arabidopsis plants brightly. Proceedings of the National Academy of Sciences of the United States of America. 94: 2122-7. PMID 9122158 DOI: 10.1073/Pnas.94.6.2122  0.441
1996 Siemering KR, Golbik R, Sever R, Haseloff J. Mutations that suppress the thermosensitivity of green fluorescent protein. Current Biology. 6: 1653-1663. PMID 8994830 DOI: 10.1016/S0960-9822(02)70789-6  0.34
1995 Haseloff J, Amos B. GFP in plants. Trends in Genetics : Tig. 11: 328-9. PMID 8585134 DOI: 10.1016/0168-9525(95)90186-8  0.324
1993 Robaglia C, Bruening G, Haseloff J, Gerlach WL. Evolution and replication of tobacco ringspot virus satellite RNA mutants. The Embo Journal. 12: 2969-76. PMID 7687543 DOI: 10.1002/J.1460-2075.1993.Tb05959.X  0.66
1990 Davies C, Haseloff J, Symons RH. Structure, self-cleavage, and replication of two viroid-like satellite RNAs (virusoids) of subterranean clover mottle virus. Virology. 177: 216-24. PMID 1693803 DOI: 10.1016/0042-6822(90)90475-7  0.587
1989 Haseloff J, Gerlach WL. Sequences required for self-catalysed cleavage of the satellite RNA of tobacco ringspot virus. Gene. 82: 43-52. PMID 2684775 DOI: 10.1016/0378-1119(89)90028-0  0.666
1988 Haseloff J, Gerlach WL. Simple RNA enzymes with new and highly specific endoribonuclease activities. Nature. 334: 585-91. PMID 2457170 DOI: 10.1038/334585A0  0.669
1987 Gerlach WL, Llewellyn D, Haseloff J. Construction of a plant disease resistance gene from the satellite RNA of tobacco ringspot virus Nature. 328: 802-805. DOI: 10.1038/328802A0  0.675
1985 Ahlquist P, Strauss EG, Rice CM, Strauss JH, Haseloff J, Zimmern D. Sindbis virus proteins nsP1 and nsP2 contain homology to nonstructural proteins from several RNA plant viruses. Journal of Virology. 53: 536-42. PMID 3968720 DOI: 10.1128/Jvi.53.2.536-542.1985  0.319
1984 Haseloff J, Goelet P, Zimmern D, Ahlquist P, Dasgupta R, Kaesberg P. Striking similarities in amino acid sequence among nonstructural proteins encoded by RNA viruses that have dissimilar genomic organization. Proceedings of the National Academy of Sciences of the United States of America. 81: 4358-62. PMID 6611550 DOI: 10.1073/Pnas.81.14.4358  0.378
1982 Haseloff J, Symons RH. Comparative sequence and structure of viroid-like RNAs of two plant viruses. Nucleic Acids Research. 10: 3681-91. PMID 7111020 DOI: 10.1093/Nar/10.12.3681  0.588
1982 Mohamed NA, Haseloff J, Imperial JS, Symons RH. Characterization of the Different Electrophoretic Forms of the Cadang-Cadang Viroid Journal of General Virology. 63: 181-188. DOI: 10.1099/0022-1317-63-1-181  0.533
1982 Haseloff J, Mohamed NA, Symons RH. Viroid RNAs of cadang-cadang disease of coconuts Nature. 299: 316-321. DOI: 10.1038/299316A0  0.568
1981 Haseloff J, Symons RH. Chrysanthemum stunt viroid: primary sequence and secondary structure. Nucleic Acids Research. 9: 2741-52. PMID 7279660 DOI: 10.1093/Nar/9.12.2741  0.547
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