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Jun Yin - Publications

Affiliations: 
Chemistry University of Chicago, Chicago, IL 
Area:
enzyme directed evolution
Website:
http://chemistry.uchicago.edu/faculty/faculty/person/member/jun-yin.html
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42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Zhou H, Carpenter T, Fu X, Jin B, Ody B, Hassan MS, Jacobs SE, Cheung J, Nicholson EM, Turlington M, Zhao B, Lorenz S, Cropp A, Yin J. Linkage-Specific Synthesis of di-Ubiquitin Probes Enabled by the Incorporation of Unnatural Amino Acid ThzK. Chembiochem : a European Journal of Chemical Biology. PMID 35263494 DOI: 10.1002/cbic.202200133  0.715
2022 Huang B, Zhou L, Liu R, Wang L, Xue S, Shi Y, Jeong GH, Jeong IH, Li S, Yin J, Cai J. Activation of E6AP/UBE3A-Mediated Protein Ubiquitination and Degradation Pathways by a Cyclic γ-AA Peptide. Journal of Medicinal Chemistry. PMID 35045253 DOI: 10.1021/acs.jmedchem.1c01922  0.307
2015 Liu C, Tang W, Chen S, Wang Y, Qiu H, Yin J, Gu H. IGFBP3 polymorphisms and risk of esophageal cancer in a Chinese population. International Journal of Clinical and Experimental Medicine. 8: 17006-17014. PMID 26629256  0.322
2015 Zhang K, Bhuripanyo K, Wang Y, Yin J. Coupling Binding to Catalysis: Using Yeast Cell Surface Display to Select Enzymatic Activities. Methods in Molecular Biology (Clifton, N.J.). 1319: 245-60. PMID 26060080 DOI: 10.1007/978-1-4939-2748-7_14  0.458
2015 Hu J, Tan Z, Ren D, Zhang X, He Y, Bao C, Liu D, Yi Q, Qian W, Yin J, Xu Z, Yu C, Wang S, Wu B, Yang H, et al. Clinical characteristics and risk factors of an outbreak with scrub typhus in previously unrecognized areas, jiangsu province, china 2013. Plos One. 10: e0125999. PMID 25954814 DOI: 10.1371/journal.pone.0125999  0.341
2015 Zhao B, Zhang K, Bhuripanyo K, Wang Y, Zhou H, Zhang M, Yin J. Phage selection assisted by Sfp phosphopantetheinyl transferase-catalyzed site-specific protein labeling. Methods in Molecular Biology (Clifton, N.J.). 1266: 161-70. PMID 25560074 DOI: 10.1007/978-1-4939-2272-7_11  0.511
2013 Zhao B, Zhang K, Bhuripanyo K, Choi CH, Villhauer EB, Li H, Zheng N, Kiyokawa H, Schindelin H, Yin J. Profiling the cross reactivity of ubiquitin with the Nedd8 activating enzyme by phage display. Plos One. 8: e70312. PMID 23936405 DOI: 10.1371/Journal.Pone.0070312  0.518
2013 Zhao B, Zhang K, Villhauer EB, Bhuripanyo K, Kiyokawa H, Schindelin H, Yin J. Phage display to identify Nedd8-mimicking peptides as inhibitors of the Nedd8 transfer cascade. Chembiochem : a European Journal of Chemical Biology. 14: 1323-30. PMID 23824602 DOI: 10.1002/Cbic.201300234  0.498
2013 Zhang K, Li H, Bhuripanyo K, Zhao B, Chen TF, Zheng N, Yin J. Engineering new protein-protein interactions on the β-propeller fold by yeast cell surface display. Chembiochem : a European Journal of Chemical Biology. 14: 426-30. PMID 23401304 DOI: 10.1002/Cbic.201200718  0.471
2013 Zhang K, Nelson KM, Bhuripanyo K, Grimes KD, Zhao B, Aldrich CC, Yin J. Engineering the substrate specificity of the DhbE adenylation domain by yeast cell surface display. Chemistry & Biology. 20: 92-101. PMID 23352143 DOI: 10.1016/J.Chembiol.2012.10.020  0.457
2012 Zhao B, Choi CH, Bhuripanyo K, Villhauer EB, Zhang K, Schindelin H, Yin J. Inhibiting the protein ubiquitination cascade by ubiquitin-mimicking short peptides. Organic Letters. 14: 5760-3. PMID 23134251 DOI: 10.1021/Ol3027736  0.461
2012 Zhao B, Bhuripanyo K, Zhang K, Kiyokawa H, Schindelin H, Yin J. Orthogonal ubiquitin transfer through engineered E1-E2 cascades for protein ubiquitination. Chemistry & Biology. 19: 1265-77. PMID 23102221 DOI: 10.1016/J.Chembiol.2012.07.023  0.455
2012 Zhao B, Bhuripanyo K, Schneider J, Zhang K, Schindelin H, Boone D, Yin J. Specificity of the E1-E2-E3 enzymatic cascade for ubiquitin C-terminal sequences identified by phage display. Acs Chemical Biology. 7: 2027-35. PMID 23003343 DOI: 10.1021/Cb300339P  0.46
2011 Sunbul M, Emerson N, Yin J. Enzyme-catalyzed substrate attachment to phage surfaces for the selection of catalytic activities. Chembiochem : a European Journal of Chemical Biology. 12: 380-6. PMID 21290537 DOI: 10.1002/Cbic.201000475  0.51
2010 Xiang C, Zhang KH, Yin J, Arends JJ, Erzurumlu RS, Jacquin MF, Chen ZF. The transcription factor, Lmx1b, is necessary for the development of the principal trigeminal nucleus-based lemniscal pathway. Molecular and Cellular Neurosciences. 44: 394-403. PMID 20621716 DOI: 10.1016/J.Mcn.2010.05.005  0.379
2010 Wegner SV, Arslan H, Sunbul M, Yin J, He C. Dynamic copper(I) imaging in mammalian cells with a genetically encoded fluorescent copper(I) sensor. Journal of the American Chemical Society. 132: 2567-9. PMID 20131768 DOI: 10.1021/Ja9097324  0.461
2010 Young TS, Ahmad I, Yin JA, Schultz PG. An enhanced system for unnatural amino acid mutagenesis in E. coli. Journal of Molecular Biology. 395: 361-74. PMID 19852970 DOI: 10.1016/J.Jmb.2009.10.030  0.748
2009 Zhang K, He J, Yang M, Yen M, Yin J. Identifying natural product biosynthetic genes from a soil metagenome by using T7 phage selection. Chembiochem : a European Journal of Chemical Biology. 10: 2599-606. PMID 19780075 DOI: 10.1002/Cbic.200900297  0.377
2009 Sunbul M, Yin J. Site specific protein labeling by enzymatic posttranslational modification. Organic & Biomolecular Chemistry. 7: 3361-71. PMID 19675886 DOI: 10.1039/B908687K  0.557
2009 Yin J, Qu H, Zhang K, Luo J, Zhang X, Chi C, Wu J. Electron-deficient triphenylene and trinaphthylene carboximides. Organic Letters. 11: 3028-31. PMID 19548699 DOI: 10.1021/Ol901041N  0.375
2009 Sunbul M, Zhang K, Yin J. Chapter 10 using phosphopantetheinyl transferases for enzyme posttranslational activation, site specific protein labeling and identification of natural product biosynthetic gene clusters from bacterial genomes. Methods in Enzymology. 458: 255-75. PMID 19374986 DOI: 10.1016/S0076-6879(09)04810-1  0.679
2009 Sunbul M, Marshall NJ, Zou Y, Zhang K, Yin J. Catalytic turnover-based phage selection for engineering the substrate specificity of Sfp phosphopantetheinyl transferase. Journal of Molecular Biology. 387: 883-98. PMID 19340948 DOI: 10.1016/J.Jmb.2009.02.010  0.659
2008 Sunbul M, Yen M, Zou Y, Yin J. Enzyme catalyzed site-specific protein labeling and cell imaging with quantum dots. Chemical Communications (Cambridge, England). 5927-9. PMID 19030541 DOI: 10.1039/B812162A  0.543
2008 Liu J, Shi YH, Yin J, Gui JF. [Screen of differentially expressed genes between gastrula embryos and tail bud embryos in gynogenetic gibel carp (Carassius auratus gibelio)]. Yi Chuan Xue Bao = Acta Genetica Sinica. 32: 253-63. PMID 15931786  0.333
2007 Yin J, Xia JH, Du XZ, Liu J, Zhou L, Hong YH, Gui JF. Developmental expression of CagMdkb during gibel carp embryogenesis. The International Journal of Developmental Biology. 51: 761-9. PMID 17939124 DOI: 10.1387/ijdb.072346jy  0.374
2007 Zhou Z, Cironi P, Lin AJ, Xu Y, Hrvatin S, Golan DE, Silver PA, Walsh CT, Yin J. Genetically encoded short peptide tags for orthogonal protein labeling by Sfp and AcpS phosphopantetheinyl transferases. Acs Chemical Biology. 2: 337-46. PMID 17465518 DOI: 10.1021/Cb700054K  0.588
2007 Yin J, Straight PD, Hrvatin S, Dorrestein PC, Bumpus SB, Jao C, Kelleher NL, Kolter R, Walsh CT. Genome-wide high-throughput mining of natural-product biosynthetic gene clusters by phage display. Chemistry & Biology. 14: 303-12. PMID 17379145 DOI: 10.1016/J.Chembiol.2007.01.006  0.678
2007 Singh GM, Vaillancourt FH, Yin J, Walsh CT. Characterization of SyrC, an aminoacyltransferase shuttling threonyl and chlorothreonyl residues in the syringomycin biosynthetic assembly line. Chemistry & Biology. 14: 31-40. PMID 17254950 DOI: 10.1016/J.Chembiol.2006.11.005  0.709
2006 Yin J, Lin AJ, Golan DE, Walsh CT. Site-specific protein labeling by Sfp phosphopantetheinyl transferase. Nature Protocols. 1: 280-5. PMID 17406245 DOI: 10.1038/Nprot.2006.43  0.601
2005 McLoughlin SM, Mazur MT, Miller LM, Yin J, Liu F, Walsh CT, Kelleher NL. Chemoenzymatic approaches for streamlined detection of active site modifications on thiotemplate assembly lines using mass spectrometry. Biochemistry. 44: 14159-69. PMID 16245932 DOI: 10.1021/Bi051202G  0.643
2005 Yin J, Straight PD, McLoughlin SM, Zhou Z, Lin AJ, Golan DE, Kelleher NL, Kolter R, Walsh CT. Genetically encoded short peptide tag for versatile protein labeling by Sfp phosphopantetheinyl transferase. Proceedings of the National Academy of Sciences of the United States of America. 102: 15815-20. PMID 16236721 DOI: 10.1073/Pnas.0507705102  0.678
2005 Yin J, Lin AJ, Buckett PD, Wessling-Resnick M, Golan DE, Walsh CT. Single-cell FRET imaging of transferrin receptor trafficking dynamics by Sfp-catalyzed, site-specific protein labeling. Chemistry & Biology. 12: 999-1006. PMID 16183024 DOI: 10.1016/J.Chembiol.2005.07.006  0.57
2005 Vaillancourt FH, Yin J, Walsh CT. SyrB2 in syringomycin E biosynthesis is a nonheme FeII alpha-ketoglutarate- and O2-dependent halogenase. Proceedings of the National Academy of Sciences of the United States of America. 102: 10111-6. PMID 16002467 DOI: 10.1073/Pnas.0504412102  0.542
2004 Venkateshrao S, Yin J, Jarzecki AA, Schultz PG, Spiro TG. Porphyrin distortion during affinity maturation of a ferrochelatase antibody, monitored by Resonance Raman spectroscopy. Journal of the American Chemical Society. 126: 16361-7. PMID 15600337 DOI: 10.1021/Ja0465395  0.5
2004 Yin J, Liu F, Schinke M, Daly C, Walsh CT. Phagemid encoded small molecules for high throughput screening of chemical libraries. Journal of the American Chemical Society. 126: 13570-1. PMID 15493886 DOI: 10.1021/Ja045127T  0.566
2004 Yin J, Liu F, Li X, Walsh CT. Labeling proteins with small molecules by site-specific posttranslational modification. Journal of the American Chemical Society. 126: 7754-5. PMID 15212504 DOI: 10.1021/Ja047749K  0.61
2004 Yin J, Mills JH, Schultz PG. A catalysis-based selection for peroxidase antibodies with increased activity. Journal of the American Chemical Society. 126: 3006-7. PMID 15012103 DOI: 10.1021/Ja039198O  0.691
2004 Jimenez R, Salazar G, Yin J, Joo T, Romesberg FE. Protein dynamics and the immunological evolution of molecular recognition. Proceedings of the National Academy of Sciences of the United States of America. 101: 3803-8. PMID 15001706 DOI: 10.1073/Pnas.0305745101  0.526
2003 Yin J, Beuscher AE, Andryski SE, Stevens RC, Schultz PG. Structural plasticity and the evolution of antibody affinity and specificity. Journal of Molecular Biology. 330: 651-6. PMID 12850137 DOI: 10.1016/S0022-2836(03)00631-4  0.499
2003 Yin J, Andryski SE, Beuscher AE, Stevens RC, Schultz PG. Structural evidence for substrate strain in antibody catalysis. Proceedings of the National Academy of Sciences of the United States of America. 100: 856-61. PMID 12552112 DOI: 10.1073/Pnas.0235873100  0.498
2002 Schultz PG, Yin J, Lerner RA. The chemistry of the antibody molecule. Angewandte Chemie (International Ed. in English). 41: 4427-37. PMID 12458503 DOI: 10.1002/1521-3773(20021202)41:23<4427::Aid-Anie4427>3.0.Co;2-K  0.496
2002 Schultz PG, Yin J, Lerner RA. Die Chemie von Antikörpern Angewandte Chemie. 114: 4607-4618. DOI: 10.1002/1521-3757(20021202)114:23<4607::Aid-Ange4607>3.0.Co;2-U  0.431
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