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Thomas Lavergne - Publications

Affiliations: 
2010-2012 Scripps Research Institute, La Jolla, La Jolla, CA, United States 
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30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Gusti Ngurah Putu EP, Cattiaux L, Lavergne T, Pommier Y, Bombard S, Granzhan A. Unprecedented reactivity of polyamines with aldehydic DNA modifications: structural determinants of reactivity, characterization and enzymatic stability of adducts. Nucleic Acids Research. PMID 37850658 DOI: 10.1093/nar/gkad837  0.425
2022 Bonnet H, Morel M, Devaux A, Boissieras J, Granzhan A, Elias B, Lavergne T, Dejeu J, Defrancq E. Assessment of presumed small-molecule ligands of telomeric i-DNA by biolayer interferometry (BLI). Chemical Communications (Cambridge, England). 58: 5116-5119. PMID 35380138 DOI: 10.1039/d2cc00836j  0.382
2020 Devaux A, Bonnat L, Lavergne T, Defrancq E. Access to a stabilized i-motif DNA structure through four successive ligation reactions on a cyclopeptide scaffold. Organic & Biomolecular Chemistry. PMID 32756719 DOI: 10.1039/D0Ob01311K  0.501
2018 Prado E, Bonnat L, Bonnet H, Lavergne T, Van Der Heyden A, Pratviel G, Dejeu J, Defrancq E. Influence of the SPR Experimental Conditions on the G-Quadruplex DNA Recognition by Porphyrin Derivatives. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 30293430 DOI: 10.1021/Acs.Langmuir.8B02942  0.348
2017 Piraux G, Bar L, Abraham M, Lavergne T, Jamet H, Dejeu J, Marcélis L, Defrancq É, Elias B. New Ruthenium-based probes for selective G-quadruplex targeting. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 28609545 DOI: 10.1002/Chem.201702076  0.344
2017 Bonnat L, Bar L, Gennaro B, Bonnet H, Jarjayes O, Thomas F, Dejeu J, Defrancq E, Lavergne T. Template mediated stabilization of a DNA G-quadruplex formed in the HIV-1 promoter and comparative binding studies. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 28264144 DOI: 10.1002/Chem.201700417  0.346
2017 Zhang Y, Lamb BM, Feldman AW, Zhou AX, Lavergne T, Li L, Romesberg FE. A semisynthetic organism engineered for the stable expansion of the genetic alphabet. Proceedings of the National Academy of Sciences of the United States of America. PMID 28115716 DOI: 10.1073/Pnas.1616443114  0.757
2016 Lecarme L, Prado E, De Rache A, Nicolau-Travers ML, Gellon G, Dejeu J, Lavergne T, Jamet H, Gomez D, Mergny JL, Defrancq E, Jarjayes O, Thomas F. Efficient Inhibition of Telomerase by Nickel-Salophen Complexes. Chemmedchem. PMID 27166712 DOI: 10.1002/Cmdc.201600171  0.311
2016 Lavergne T, Lamichhane R, Malyshev DA, Li Z, Li L, Sperling E, Williamson JR, Millar DP, Romesberg FE. FRET Characterization of Complex Conformational Changes in a Large 16S Ribosomal RNA Fragment Site-Specifically Labeled Using Unnatural Base Pairs. Acs Chemical Biology. PMID 26942998 DOI: 10.1021/Acschembio.5B00952  0.755
2016 Bonnat L, Dejeu J, Bonnet H, Génnaro B, Jarjayes O, Thomas F, Lavergne T, Defrancq E. Templated Formation of Discrete RNA and DNA:RNA Hybrid G-Quadruplexes and Their Interactions with Targeting Ligands. Chemistry (Weinheim An Der Bergstrasse, Germany). 22: 3139-47. PMID 26808196 DOI: 10.1002/Chem.201504351  0.457
2016 Dejeu J, Lavergne T, Nora JD, Defrancq E, Pratviel G. Binding of metalloporphyrins to G-quadruplex DNA: The role of the central metal Inorganica Chimica Acta. 452: 98-103. DOI: 10.1016/J.Ica.2016.02.007  0.413
2016 Bonnat L, Dejeu J, Bonnet H, Génnaro B, Jarjayes O, Thomas F, Lavergne T, Defrancq E. Templated Formation of Discrete RNA and DNA: RNA Hybrid G-Quadruplexes and Their Interactions with Targeting Ligands Chemistry - a European Journal. DOI: 10.1002/chem.201504351  0.328
2015 Bonnet R, Lavergne T, Gennaro B, Spinelli N, Defrancq E. Construction of anti-parallel G-quadruplexes through sequential templated click. Chemical Communications (Cambridge, England). 51: 4850-3. PMID 25695596 DOI: 10.1039/C4Cc09744K  0.47
2014 Malyshev DA, Dhami K, Lavergne T, Chen T, Dai N, Foster JM, Corrêa IR, Romesberg FE. A semi-synthetic organism with an expanded genetic alphabet. Nature. 509: 385-8. PMID 24805238 DOI: 10.1038/Nature13314  0.801
2014 Stefan L, Lavergne T, Spinelli N, Defrancq E, Monchaud D. Surface-immobilized DNAzyme-type biocatalysis. Nanoscale. 6: 2693-701. PMID 24452273 DOI: 10.1039/C3Nr05954E  0.587
2014 Li L, Degardin M, Lavergne T, Malyshev DA, Dhami K, Ordoukhanian P, Romesberg FE. Natural-like replication of an unnatural base pair for the expansion of the genetic alphabet and biotechnology applications. Journal of the American Chemical Society. 136: 826-9. PMID 24152106 DOI: 10.1021/Ja408814G  0.784
2013 Betz K, Malyshev DA, Lavergne T, Welte W, Diederichs K, Romesberg FE, Marx A. Structural insights into DNA replication without hydrogen bonds. Journal of the American Chemical Society. 135: 18637-43. PMID 24283923 DOI: 10.1021/Ja409609J  0.831
2013 Li Z, Lavergne T, Malyshev DA, Zimmermann J, Adhikary R, Dhami K, Ordoukhanian P, Sun Z, Xiang J, Romesberg FE. Site-specifically arraying small molecules or proteins on DNA using an expanded genetic alphabet. Chemistry (Weinheim An Der Bergstrasse, Germany). 19: 14205-9. PMID 24026962 DOI: 10.1002/Chem.201302496  0.776
2013 Lavergne T, Degardin M, Malyshev DA, Quach HT, Dhami K, Ordoukhanian P, Romesberg FE. Expanding the scope of replicable unnatural DNA: stepwise optimization of a predominantly hydrophobic base pair. Journal of the American Chemical Society. 135: 5408-19. PMID 23547847 DOI: 10.1021/Ja312148Q  0.789
2013 Baraguey C, Lescrinier E, Lavergne T, Debart F, Herdewijn P, Vasseur JJ. The biolabile 2'-O-pivaloyloxymethyl modification in an RNA helix: an NMR solution structure. Organic & Biomolecular Chemistry. 11: 2638-47. PMID 23455628 DOI: 10.1039/C3Ob27005J  0.329
2012 Malyshev DA, Dhami K, Quach HT, Lavergne T, Ordoukhanian P, Torkamani A, Romesberg FE. Efficient and sequence-independent replication of DNA containing a third base pair establishes a functional six-letter genetic alphabet. Proceedings of the National Academy of Sciences of the United States of America. 109: 12005-10. PMID 22773812 DOI: 10.1073/Pnas.1205176109  0.816
2012 Betz K, Malyshev DA, Lavergne T, Welte W, Diederichs K, Dwyer TJ, Ordoukhanian P, Romesberg FE, Marx A. KlenTaq polymerase replicates unnatural base pairs by inducing a Watson-Crick geometry. Nature Chemical Biology. 8: 612-4. PMID 22660438 DOI: 10.1038/Nchembio.966  0.822
2012 Lavergne T, Malyshev DA, Romesberg FE. Major groove substituents and polymerase recognition of a class of predominantly hydrophobic unnatural base pairs. Chemistry (Weinheim An Der Bergstrasse, Germany). 18: 1231-9. PMID 22190386 DOI: 10.1002/Chem.201102066  0.833
2011 Seo YJ, Malyshev DA, Lavergne T, Ordoukhanian P, Romesberg FE. Site-specific labeling of DNA and RNA using an efficiently replicated and transcribed class of unnatural base pairs. Journal of the American Chemical Society. 133: 19878-88. PMID 21981600 DOI: 10.1021/Ja207907D  0.815
2011 Lavergne T, Baraguey C, Dupouy C, Parey N, Wuensche W, Sczakiel G, Vasseur JJ, Debart F. Synthesis and preliminary evaluation of pro-RNA 2'-O-masked with biolabile pivaloyloxymethyl groups in an RNA interference assay. The Journal of Organic Chemistry. 76: 5719-31. PMID 21619027 DOI: 10.1021/Jo200826H  0.362
2010 Lavergne T, Janin M, Dupouy C, Vasseur JJ, Debart F. Chemical synthesis of RNA with base-labile 2'-o-(pivaloyloxymethyl)-protected ribonucleoside phosphoramidites. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit3.19. PMID 21154530 DOI: 10.1002/0471142700.Nc0319S43  0.45
2010 Zlatev I, Lavergne T, Debart F, Vasseur JJ, Manoharan M, Morvan F. Efficient solid-phase chemical synthesis of 5'-triphosphates of DNA, RNA, and their analogues. Organic Letters. 12: 2190-3. PMID 20420425 DOI: 10.1021/Ol1004214  0.508
2009 Martin AR, Lavergne T, Vasseur JJ, Debart F. Assessment of new 2'-O-acetalester protecting groups for regular RNA synthesis and original 2'-modified proRNA. Bioorganic & Medicinal Chemistry Letters. 19: 4046-9. PMID 19560920 DOI: 10.1016/J.Bmcl.2009.06.015  0.336
2009 Lavergne T, Parey N, Vasseur J, Debart F. Efficient Release of Base‐Sensitive Oligonucleotides from Solid Supports using Fluoride Ions European Journal of Organic Chemistry. 2009: 2190-2194. DOI: 10.1002/Ejoc.200801275  0.352
2008 Lavergne T, Bertrand JR, Vasseur JJ, Debart F. A base-labile group for 2'-OH protection of ribonucleosides: a major challenge for RNA synthesis. Chemistry (Weinheim An Der Bergstrasse, Germany). 14: 9135-8. PMID 18767078 DOI: 10.1002/Chem.200801392  0.356
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