| Year |
Citation |
Score |
| 2018 |
O'Brien LL, Guo Q, Bahrami-Samani E, Park JS, Hasso SM, Lee YJ, Fang A, Kim AD, Guo J, Hong TM, Peterson KA, Lozanoff S, Raviram R, Ren B, Fogelgren B, ... ... Valouev A, et al. Transcriptional regulatory control of mammalian nephron progenitors revealed by multi-factor cistromic analysis and genetic studies. Plos Genetics. 14: e1007181. PMID 29377931 DOI: 10.1371/Journal.Pgen.1007181 |
0.337 |
|
| 2016 |
O'Brien LL, Guo Q, Lee Y, Tran T, Benazet JD, Whitney PH, Valouev A, McMahon AP. Differential regulation of mouse and human nephron progenitors by the Six family of transcriptional regulators. Development (Cambridge, England). 143: 595-608. PMID 26884396 DOI: 10.1242/Dev.127175 |
0.322 |
|
| 2016 |
Peng JC, Valouev A, Liu N, Lin H. Piwi maintains germline stem cells and oogenesis in Drosophila through negative regulation of Polycomb group proteins. Nature Genetics. PMID 26780607 DOI: 10.1038/Ng.3486 |
0.316 |
|
| 2014 |
Hannibal RL, Chuong EB, Rivera-Mulia JC, Gilbert DM, Valouev A, Baker JC. Copy number variation is a fundamental aspect of the placental genome. Plos Genetics. 10: e1004290. PMID 24785991 DOI: 10.1371/Journal.Pgen.1004290 |
0.392 |
|
| 2012 |
Merker JD, Valouev A, Gotlib J. Next-generation sequencing in hematologic malignancies: what will be the dividends? Therapeutic Advances in Hematology. 3: 333-9. PMID 23606936 DOI: 10.1177/2040620712458948 |
0.314 |
|
| 2011 |
Valouev A, Johnson SM, Boyd SD, Smith CL, Fire AZ, Sidow A. Determinants of nucleosome organization in primary human cells. Nature. 474: 516-20. PMID 21602827 DOI: 10.1038/Nature10002 |
0.436 |
|
| 2011 |
Ma Z, Swigut T, Valouev A, Rada-Iglesias A, Wysocka J. Sequence-specific regulator Prdm14 safeguards mouse ESCs from entering extraembryonic endoderm fates. Nature Structural & Molecular Biology. 18: 120-7. PMID 21183938 DOI: 10.1038/Nsmb.2000 |
0.394 |
|
| 2010 |
Gracey LE, Chen ZY, Maniar JM, Valouev A, Sidow A, Kay MA, Fire AZ. An in vitro-identified high-affinity nucleosome-positioning signal is capable of transiently positioning a nucleosome in vivo. Epigenetics & Chromatin. 3: 13. PMID 20594331 DOI: 10.1186/1756-8935-3-13 |
0.367 |
|
| 2010 |
Teague B, Waterman MS, Goldstein S, Potamousis K, Zhou S, Reslewic S, Sarkar D, Valouev A, Churas C, Kidd JM, Kohn S, Runnheim R, Lamers C, Forrest D, Newton MA, et al. High-resolution human genome structure by single-molecule analysis. Proceedings of the National Academy of Sciences of the United States of America. 107: 10848-53. PMID 20534489 DOI: 10.1073/Pnas.0914638107 |
0.61 |
|
| 2009 |
Peng JC, Valouev A, Swigut T, Zhang J, Zhao Y, Sidow A, Wysocka J. Jarid2/Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells. Cell. 139: 1290-302. PMID 20064375 DOI: 10.1016/J.Cell.2009.12.002 |
0.33 |
|
| 2009 |
Brunner AL, Johnson DS, Kim SW, Valouev A, Reddy TE, Neff NF, Anton E, Medina C, Nguyen L, Chiao E, Oyolu CB, Schroth GP, Absher DM, Baker JC, Myers RM. Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver. Genome Research. 19: 1044-56. PMID 19273619 DOI: 10.1101/Gr.088773.108 |
0.304 |
|
| 2008 |
Valouev A, Johnson DS, Sundquist A, Medina C, Anton E, Batzoglou S, Myers RM, Sidow A. Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data. Nature Methods. 5: 829-34. PMID 19160518 DOI: 10.1038/Nmeth.1246 |
0.392 |
|
| 2008 |
Valouev A, Ichikawa J, Tonthat T, Stuart J, Ranade S, Peckham H, Zeng K, Malek JA, Costa G, McKernan K, Sidow A, Fire A, Johnson SM. A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning. Genome Research. 18: 1051-63. PMID 18477713 DOI: 10.1101/Gr.076463.108 |
0.453 |
|
| 2007 |
Li H, Valouev A, Schwartz DC, Waterman MS, Li LM. A quantile method for sizing optical maps. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 14: 255-66. PMID 17563310 DOI: 10.1089/Cmb.2006.0006 |
0.588 |
|
| 2006 |
Valouev A, Schwartz DC, Zhou S, Waterman MS. An algorithm for assembly of ordered restriction maps from single DNA molecules. Proceedings of the National Academy of Sciences of the United States of America. 103: 15770-5. PMID 17043225 DOI: 10.1073/Pnas.0604040103 |
0.627 |
|
| 2006 |
Valouev A, Li L, Liu YC, Schwartz DC, Yang Y, Zhang Y, Waterman MS. Alignment of optical maps. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 13: 442-62. PMID 16597251 DOI: 10.1089/Cmb.2006.13.442 |
0.561 |
|
| 2006 |
Valouev A, Zhang Y, Schwartz DC, Waterman MS. Refinement of optical map assemblies. Bioinformatics (Oxford, England). 22: 1217-24. PMID 16500933 DOI: 10.1093/Bioinformatics/Btl063 |
0.633 |
|
| Show low-probability matches. |