Year |
Citation |
Score |
2023 |
Choudhery S, DeJesus MA, Srinivasan A, Rock J, Schnappinger D, Ioerger TR. A dose-response based model for statistical analysis of chemical genetic interactions in CRISPRi libraries. Biorxiv : the Preprint Server For Biology. PMID 37577548 DOI: 10.1101/2023.08.03.551759 |
0.567 |
|
2023 |
Poulton NC, DeJesus MA, Munsamy-Govender V, Roberts CG, Azadian ZA, Bosch B, Lin KM, Li S, Rock JM. Beyond antibiotic resistance: the transcription factor coordinates an adaptive response to alanine starvation in mycobacteria. Biorxiv : the Preprint Server For Biology. PMID 37333137 DOI: 10.1101/2023.06.02.543512 |
0.304 |
|
2021 |
Dutta E, DeJesus MA, Ruecker N, Zaveri A, Koh EI, Sassetti CM, Schnappinger D, Ioerger TR. An improved statistical method to identify chemical-genetic interactions by exploiting concentration-dependence. Plos One. 16: e0257911. PMID 34597304 DOI: 10.1371/journal.pone.0257911 |
0.617 |
|
2021 |
Bosch B, DeJesus MA, Poulton NC, Zhang W, Engelhart CA, Zaveri A, Lavalette S, Ruecker N, Trujillo C, Wallach JB, Li S, Ehrt S, Chait BT, Schnappinger D, Rock JM. Genome-wide gene expression tuning reveals diverse vulnerabilities of M. tuberculosis. Cell. PMID 34297925 DOI: 10.1016/j.cell.2021.06.033 |
0.439 |
|
2019 |
Subramaniyam S, DeJesus MA, Zaveri A, Smith CM, Baker RE, Ehrt S, Schnappinger D, Sassetti CM, Ioerger TR. Statistical analysis of variability in TnSeq data across conditions using zero-inflated negative binomial regression. Bmc Bioinformatics. 20: 603. PMID 31752678 DOI: 10.1186/S12859-019-3156-Z |
0.622 |
|
2017 |
Xu W, DeJesus MA, Rücker N, Engelhart CA, Wright MG, Healy C, Lin K, Wang R, Park SW, Ioerger TR, Schnappinger D, Ehrt S. Chemical genomic interaction profiling reveals determinants of intrinsic antibiotic resistance in Mycobacterium tuberculosis. Antimicrobial Agents and Chemotherapy. PMID 28893793 DOI: 10.1128/Aac.01334-17 |
0.603 |
|
2017 |
DeJesus MA, Nambi S, Smith CM, Baker RE, Sassetti CM, Ioerger TR. Statistical analysis of genetic interactions in Tn-Seq data. Nucleic Acids Research. PMID 28334803 DOI: 10.1093/Nar/Gkx128 |
0.626 |
|
2017 |
DeJesus MA, Gerrick ER, Xu W, Park SW, Long JE, Boutte CC, Rubin EJ, Schnappinger D, Ehrt S, Fortune SM, Sassetti CM, Ioerger TR. Comprehensive Essentiality Analysis of the Mycobacterium tuberculosis Genome via Saturating Transposon Mutagenesis. Mbio. 8. PMID 28096490 DOI: 10.1128/Mbio.02133-16 |
0.628 |
|
2017 |
Maxwell S, Wallis D, Zhou N, Baker D, Mousavi-Fard S, Loesch K, Galaviz S, Sun Q, Threadgill D, Rojas C, O'Brien M, Clubb F, Ioerger T, DeJesus M, Dong W, et al. DEVELOPMENT OF NOVEL, NON-TOXIC RIFAMYCINS THAT REVERSE DRUG RESISTANCE IN DIFFUSE LARGE B-CELL LYMPHOMA (DLBCL) Hematological Oncology. 35: 253-254. DOI: 10.1002/hon.2438_118 |
0.448 |
|
2016 |
Korte J, Alber M, Trujillo CM, Syson K, Koliwer-Brandl H, Deenen R, Köhrer K, DeJesus MA, Hartman T, Jacobs WR, Bornemann S, Ioerger TR, Ehrt S, Kalscheuer R. Trehalose-6-Phosphate-Mediated Toxicity Determines Essentiality of OtsB2 in Mycobacterium tuberculosis In Vitro and in Mice. Plos Pathogens. 12: e1006043. PMID 27936238 DOI: 10.1371/Journal.Ppat.1006043 |
0.61 |
|
2016 |
Orsini CA, Setlow B, DeJesus M, Galaviz S, Loesch K, Ioerger T, Wallis D. Behavioral and transcriptomic profiling of mice null for Lphn3, a gene implicated in ADHD and addiction. Molecular Genetics & Genomic Medicine. 4: 322-43. PMID 27247960 DOI: 10.1002/Mgg3.207 |
0.521 |
|
2016 |
DeJesus MA, Ioerger TR. Normalization of transposon-mutant library sequencing datasets to improve identification of conditionally essential genes. Journal of Bioinformatics and Computational Biology. 1642004. PMID 26932272 DOI: 10.1142/S021972001642004X |
0.641 |
|
2015 |
DeJesus MA, Ambadipudi C, Baker R, Sassetti C, Ioerger TR. TRANSIT - A Software Tool for Himar1 TnSeq Analysis. Plos Computational Biology. 11: e1004401. PMID 26447887 DOI: 10.1371/Journal.Pcbi.1004401 |
0.593 |
|
2015 |
DeJesus MA, Ioerger TR. Capturing Uncertainty by Modeling Local Transposon Insertion Frequencies Improves Discrimination of Essential Genes. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 12: 92-102. PMID 26357081 DOI: 10.1109/Tcbb.2014.2326857 |
0.668 |
|
2015 |
Loesch K, Galaviz S, Hamoui Z, Clanton R, Akabani G, Deveau M, DeJesus M, Ioerger T, Sacchettini JC, Wallis D. Functional genomics screening utilizing mutant mouse embryonic stem cells identifies novel radiation-response genes. Plos One. 10: e0120534. PMID 25853515 DOI: 10.1371/Journal.Pone.0120534 |
0.593 |
|
2015 |
Wallis D, Loesch K, Galaviz S, Sun Q, DeJesus M, Ioerger T, Sacchettini JC. High-Throughput Differentiation and Screening of a Library of Mutant Stem Cell Clones Defines New Host-Based Genes Involved in Rabies Virus Infection. Stem Cells (Dayton, Ohio). 33: 2509-22. PMID 25752821 DOI: 10.1002/Stem.1983 |
0.586 |
|
2015 |
Long JE, DeJesus M, Ward D, Baker RE, Ioerger T, Sassetti CM. Identifying essential genes in Mycobacterium tuberculosis by global phenotypic profiling. Methods in Molecular Biology (Clifton, N.J.). 1279: 79-95. PMID 25636614 DOI: 10.1007/978-1-4939-2398-4_6 |
0.638 |
|
2013 |
DeJesus MA, Ioerger TR. A Hidden Markov Model for identifying essential and growth-defect regions in bacterial genomes from transposon insertion sequencing data. Bmc Bioinformatics. 14: 303. PMID 24103077 DOI: 10.1186/1471-2105-14-303 |
0.66 |
|
2013 |
DeJesus MA, Zhang YJ, Sassetti CM, Rubin EJ, Sacchettini JC, Ioerger TR. Bayesian analysis of gene essentiality based on sequencing of transposon insertion libraries. Bioinformatics (Oxford, England). 29: 695-703. PMID 23361328 DOI: 10.1093/Bioinformatics/Btt043 |
0.644 |
|
2013 |
DeJesus MA, Sacchettini JC, Ioerger TR. Reannotation of translational start sites in the genome of Mycobacterium tuberculosis. Tuberculosis (Edinburgh, Scotland). 93: 18-25. PMID 23273318 DOI: 10.1016/J.Tube.2012.11.012 |
0.602 |
|
2013 |
Dejesus MA, Ioerger TR. Improving discrimination of essential genes by modeling local insertion frequencies in transposon mutagenesis data 2013 Acm Conference On Bioinformatics, Computational Biology and Biomedical Informatics, Acm-Bcb 2013. 144-151. DOI: 10.1145/2506583.2506610 |
0.635 |
|
2011 |
Griffin JE, Gawronski JD, Dejesus MA, Ioerger TR, Akerley BJ, Sassetti CM. High-resolution phenotypic profiling defines genes essential for mycobacterial growth and cholesterol catabolism. Plos Pathogens. 7: e1002251. PMID 21980284 DOI: 10.1371/Journal.Ppat.1002251 |
0.661 |
|
Low-probability matches (unlikely to be authored by this person) |
2022 |
Li S, Poulton NC, Chang JS, Azadian ZA, DeJesus MA, Ruecker N, Zimmerman MD, Eckartt KA, Bosch B, Engelhart CA, Sullivan DF, Gengenbacher M, Dartois VA, Schnappinger D, Rock JM. CRISPRi chemical genetics and comparative genomics identify genes mediating drug potency in Mycobacterium tuberculosis. Nature Microbiology. 7: 766-779. PMID 35637331 DOI: 10.1038/s41564-022-01130-y |
0.282 |
|
2022 |
Babunovic GH, DeJesus MA, Bosch B, Chase MR, Barbier T, Dickey AK, Bryson BD, Rock JM, Fortune SM. CRISPR Interference Reveals That All--Retinoic Acid Promotes Macrophage Control of Mycobacterium tuberculosis by Limiting Bacterial Access to Cholesterol and Propionyl Coenzyme A. Mbio. e0368321. PMID 35038923 DOI: 10.1128/mbio.03683-21 |
0.249 |
|
2022 |
Poulton NC, Azadian ZA, DeJesus MA, Rock JM. Mutations in Confer Low-Level Resistance to Benzothiazinone DprE1 Inhibitors in Mycobacterium tuberculosis. Antimicrobial Agents and Chemotherapy. e0090422. PMID 35920665 DOI: 10.1128/aac.00904-22 |
0.231 |
|
2007 |
Moseley GW, Filmer RP, DeJesus MA, Jans DA. Nucleocytoplasmic distribution of rabies virus P-protein is regulated by phosphorylation adjacent to C-terminal nuclear import and export signals. Biochemistry. 46: 12053-61. PMID 17924652 DOI: 10.1021/bi700521m |
0.15 |
|
2007 |
Moseley GW, Roth DM, DeJesus MA, Leyton DL, Filmer RP, Pouton CW, Jans DA. Dynein light chain association sequences can facilitate nuclear protein import. Molecular Biology of the Cell. 18: 3204-13. PMID 17567954 DOI: 10.1091/mbc.E07-01-0030 |
0.138 |
|
1964 |
DIEZRIVAS F, DEJESUS MA. INCIDENCE OF HEART DISEASE IN PUERTO RICO (A CLINICAL AND PATHOLOGIC STATISTICAL STUDY). Boletin De La Asociacion Medica De Puerto Rico. 56: 219-35. PMID 14189663 |
0.024 |
|
1963 |
DEJESUS MA, SANCHEZDEPERALTA V, TORREGROSA MV, DEBLASINI GT. SYSTEMIC HISTOPLASMOSIS: CASE REPORT. Boletin De La Asociacion Medica De Puerto Rico. 55: 372-80. PMID 14051426 |
0.01 |
|
Hide low-probability matches. |