| Year |
Citation |
Score |
| 2023 |
Gryganskyi AP, Golan J, Muszewska A, Idnurm A, Dolatabadi S, Mondo SJ, Kutovenko VB, Kutovenko VO, Gajdeczka MT, Anishchenko IM, Pawlowska J, Tran NV, Ebersberger I, Voigt K, Wang Y, et al. Sequencing the Genomes of the First Terrestrial Fungal Lineages: What Have We Learned? Microorganisms. 11. PMID 37513002 DOI: 10.3390/microorganisms11071830 |
0.814 |
|
| 2023 |
Meili CH, Jones AL, Arreola AX, Habel J, Pratt CJ, Hanafy RA, Wang Y, Yassin AS, TagElDein MA, Moon CD, Janssen PH, Shrestha M, Rajbhandari P, Nagler M, Vinzelj JM, et al. Patterns and determinants of the global herbivorous mycobiome. Nature Communications. 14: 3798. PMID 37365172 DOI: 10.1038/s41467-023-39508-z |
0.627 |
|
| 2023 |
Wang Y, Sun Y, Li X, Chen R, Li W, Ji L, Zhao Q, Ji L, Yang S, Zhang W. Molecular detection and characterization of three novel parvoviruses belonging to two different subfamilies in zoo birds. Archives of Virology. 168: 163. PMID 37198283 DOI: 10.1007/s00705-023-05785-8 |
0.441 |
|
| 2023 |
Wang Y, Chang Y, Ortañez J, Peña JF, Carter-House D, Reynolds NK, Smith ME, Benny G, Mondo SJ, Salamov A, Lipzen A, Pangilinan J, Guo J, LaButti K, Andreopolous W, et al. Divergent evolution of early terrestrial fungi reveals the evolution of Mucormycosis pathogenicity factors. Genome Biology and Evolution. PMID 36930540 DOI: 10.1093/gbe/evad046 |
0.716 |
|
| 2023 |
Hanafy RA, Wang Y, Stajich JE, Pratt CJ, Youssef NH, Elshahed MS. Phylogenomic analysis of the : proposal of fam. nov., fam. nov., and emended description of the families and . International Journal of Systematic and Evolutionary Microbiology. 73. PMID 36827202 DOI: 10.1099/ijsem.0.005735 |
0.586 |
|
| 2022 |
Chang Y, Wang Y, Mondo S, Ahrendt S, Andreopoulos W, Barry K, Beard J, Benny GL, Blankenship S, Bonito G, Cuomo C, Desiro A, Gervers KA, Hundley H, Kuo A, et al. Evolution of zygomycete secretomes and the origins of terrestrial fungal ecologies. Iscience. 25: 104840. PMID 35996588 DOI: 10.1016/j.isci.2022.104840 |
0.786 |
|
| 2022 |
Malar C M, Wang Y, Stajich JE, Kokkoris V, Villeneuve-Laroche M, Yildirir G, Corradi N. Early branching arbuscular mycorrhizal fungus carries a small and repeat-poor genome compared to relatives in the Glomeromycotina. Microbial Genomics. 8. PMID 35451944 DOI: 10.1099/mgen.0.000810 |
0.69 |
|
| 2022 |
Sun J, Barrett H, Hall D, Kutarna S, Wu X, Wang Y, Peng H. Ecological role of 6OH-BDE47: is it a chemical offence molecule mediated by enoyl-ACP reductases? Environmental Science & Technology. 56: 451–459. PMID 34914355 DOI: 10.1021/acs.est.1c05718 |
0.307 |
|
| 2022 |
Malar MC, Wang Y, Stajich JE, Kokkoris V, Villeneuve-Laroche M, Yildirir G, Corradi N. Early branching arbuscular mycorrhizal fungus Paraglomus occultum carries a small and repeat-poor genome compared to relatives in the Glomeromycotina Microbial Genomics. 8: 000810. DOI: https://doi.org/10.1099/mgen.0.000810 |
0.45 |
|
| 2021 |
Xu T, Wang Y, Sun J, Chen C, Watanabe HK, Chen J, Qian PY, Qiu JW. Hidden historical habitat-linked population divergence and contemporary gene flow of a deep-sea patellogastropod limpet. Molecular Biology and Evolution. PMID 34534352 DOI: 10.1093/molbev/msab278 |
0.304 |
|
| 2021 |
Malar C M, Krüger M, Krüger C, Wang Y, Stajich JE, Keller J, Chen ECH, Yildirir G, Villeneuve-Laroche M, Roux C, Delaux PM, Corradi N. The genome of Geosiphon pyriformis reveals ancestral traits linked to the emergence of the arbuscular mycorrhizal symbiosis. Current Biology : Cb. 31: 1578-1580. PMID 33848479 DOI: 10.1016/j.cub.2021.03.032 |
0.634 |
|
| 2021 |
Li Y, Steenwyk JL, Chang Y, Wang Y, James TY, Stajich JE, Spatafora JW, Groenewald M, Dunn CW, Hittinger CT, Shen XX, Rokas A. A genome-scale phylogeny of the kingdom Fungi. Current Biology : Cb. PMID 33607033 DOI: 10.1016/j.cub.2021.01.074 |
0.685 |
|
| 2021 |
Malar C M, Krüger M, Krüger C, Wang Y, Stajich JE, Keller J, Chen ECH, Yildirir G, Villeneuve-Laroche M, Roux C, Delaux PM, Corradi N. The genome of Geosiphon pyriformis reveals ancestral traits linked to the emergence of the arbuscular mycorrhizal symbiosis. Current Biology : Cb. PMID 33592192 DOI: 10.1016/j.cub.2021.01.058 |
0.662 |
|
| 2021 |
Chang Y, Rochon D, Sekimoto S, Wang Y, Chovatia M, Sandor L, Salamov A, Grigoriev IV, Stajich JE, Spatafora JW. Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi. Scientific Reports. 11: 3217. PMID 33547391 DOI: 10.1038/s41598-021-82607-4 |
0.656 |
|
| 2021 |
Malar MC, Krüger M, Krüger C, Wang Y, Stajich JE, Keller J, Chen CH, Yildirir G, Villeneuve-Laroche M, Roux CR, Delaux PM, Corradi N.. The genome of Geosiphon pyriformis reveals ancestral traits linked to the emergence of the arbuscular mycorrhizal symbiosis Current Biology. 31: 1570-1577. DOI: https://doi.org/10.1016/j.cub.2021.01.058 |
0.462 |
|
| 2020 |
Wang Y, Zeng L, Wen J, Li X, Huang Y, Sun Y, Zhao J. Characterization of the complete mitochondrial genome of (Hippolytidae, Decapoda) and its phylogenetic analysis. Mitochondrial Dna. Part B, Resources. 5: 3851-3853. PMID 33426300 DOI: 10.1080/23802359.2020.1842262 |
0.307 |
|
| 2020 |
Tabima JF, Trautman IA, Chang Y, Wang Y, Mondo S, Kuo A, Salamov A, Grigoriev IV, Stajich JE, Spatafora JW. Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, . G3 (Bethesda, Md.). PMID 32727924 DOI: 10.1534/G3.120.401516 |
0.627 |
|
| 2020 |
Knudsen K, Adams JN, Kocourková J, Wang Y, Ortañez J, Stajich JE. The monophyletic Sarcogyne canadensis–wheeleri clade, a newly recognized group sister to the European Acarospora glaucocarpa group The Bryologist. 123: 11. DOI: 10.1639/0007-2745-123.1.011 |
0.602 |
|
| 2019 |
Yin H, Li D, Wang Y, Zhu Q. Whole-genome resequencing analysis of Pengxian Yellow Chicken to identify genome-wide SNPs and signatures of selection. 3 Biotech. 9: 383. PMID 31656721 DOI: 10.1007/s13205-019-1902-6 |
0.306 |
|
| 2019 |
Wang Y, Youssef NH, Couger MB, Hanafy RA, Elshahed MS, Stajich JE. Molecular Dating of the Emergence of Anaerobic Rumen Fungi and the Impact of Laterally Acquired Genes. Msystems. 4. PMID 31455637 DOI: 10.1128/mSystems.00247-19 |
0.702 |
|
| 2019 |
Wang Y, White MM, Moncalvo JM. Diversification of the gut fungi (Harpellales) co-occurred with the origin of complete metamorphosis of their symbiotic insect hosts (lower Diptera). Molecular Phylogenetics and Evolution. 106550. PMID 31279967 DOI: 10.1016/J.Ympev.2019.106550 |
0.779 |
|
| 2019 |
Glover N, Dessimoz C, Ebersberger I, Forslund SK, Gabaldón T, Huerta-Cepas J, Martin MJ, Muffato M, Patricio M, Pereira C, Sousa da Silva A, Wang Y, Sonnhammer E, Thomas PD. Advances and Applications in the Quest for Orthologs. Molecular Biology and Evolution. PMID 31241141 DOI: 10.1093/Molbev/Msz150 |
0.529 |
|
| 2019 |
Murphy CL, Youssef NH, Hanafy RA, Couger MB, Stajich JE, Wang Y, Baker K, Dagar SS, Griffith GW, Farag IF, Callaghan TM, Elshahed MS. Horizontal gene transfer as an indispensable driver for Neocallimastigomycota evolution into a distinct gut-dwelling fungal lineage. Applied and Environmental Microbiology. PMID 31126947 DOI: 10.1128/Aem.00988-19 |
0.718 |
|
| 2018 |
Chen Q, Liu X, Hu Y, Sun B, Hu Y, Wang X, Tang H, Wang Y. Transcriptomic Profiling of Fruit Development in Black Raspberry . International Journal of Genomics. 2018: 8084032. PMID 29805970 DOI: 10.1155/2018/8084032 |
0.306 |
|
| 2018 |
Wang Y, Stata M, Wang W, Stajich JE, White MM, Moncalvo JM. Comparative Genomics Reveals the Core Gene Toolbox for the Fungus-Insect Symbiosis. Mbio. 9. PMID 29764946 DOI: 10.1128/Mbio.00636-18 |
0.814 |
|
| 2017 |
Chen K, Wang Y, Li XY, Peng H, Ma YJ. Sequencing and analysis of the complete mitochondrial genome in Anopheles sinensis (Diptera: Culicidae). Infectious Diseases of Poverty. 6: 149. PMID 28969698 DOI: 10.1186/s40249-017-0362-7 |
0.341 |
|
| 2017 |
Karanja BK, Fan L, Xu L, Wang Y, Zhu X, Tang M, Wang R, Zhang F, Muleke EM, Liu L. Genome-wide characterization of the WRKY gene family in radish (Raphanus sativus L.) reveals its critical functions under different abiotic stresses. Plant Cell Reports. PMID 28819820 DOI: 10.1007/s00299-017-2190-4 |
0.325 |
|
| 2017 |
Feng H, Xu L, Wang Y, Tang M, Zhu X, Zhang W, Sun X, Nie S, Muleke EM, Liu L. Identification of critical genes associated with lignin biosynthesis in radish (Raphanus sativus L.) by de novo transcriptome sequencing. Molecular Genetics and Genomics : Mgg. PMID 28667404 DOI: 10.1007/s00438-017-1338-9 |
0.301 |
|
| 2016 |
Li C, Wang Y, Xu L, Nie S, Chen Y, Liang D, Sun X, Karanja BK, Luo X, Liu L. Genome-Wide Characterization of the MADS-Box Gene Family in Radish (Raphanus sativus L.) and Assessment of Its Roles in Flowering and Floral Organogenesis. Frontiers in Plant Science. 7: 1390. PMID 27703461 DOI: 10.3389/fpls.2016.01390 |
0.308 |
|
| 2016 |
Cheng F, Sun R, Hou X, Zheng H, Zhang F, Zhang Y, Liu B, Liang J, Zhuang M, Liu Y, Liu D, Wang X, Li P, Liu Y, Lin K, ... ... Wang Y, et al. Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea. Nature Genetics. PMID 27526322 DOI: 10.1038/Ng.3634 |
0.304 |
|
| 2016 |
Wang Y, White MM, Moncalvo JM. Draft Genome Sequence of Capniomyces stellatus, the Obligate Gut Fungal Symbiont of Stonefly. Genome Announcements. 4. PMID 27491991 DOI: 10.1128/Genomea.00761-16 |
0.79 |
|
| 2016 |
Wang Y, White MM, Kvist S, Moncalvo JM. Genome-wide survey of gut fungi (Harpellales) reveals the first horizontally transferred ubiquitin gene from a mosquito host. Molecular Biology and Evolution. PMID 27343289 DOI: 10.1093/Molbev/Msw126 |
0.789 |
|
| 2016 |
Zhu F, Sun Y, Wang Y, Pan H, Wang F, Zhang X, Zhang Y, Liu J. Molecular Characterization of the Complete Genome of Three Basal-BR Isolates of Turnip mosaic virus Infecting Raphanus sativus in China. International Journal of Molecular Sciences. 17. PMID 27271614 DOI: 10.3390/ijms17060888 |
0.308 |
|
| 2015 |
Wang Y, Zhou J. Draft genome sequence of Citrobacter freundii strain ST2, a γ-proteobacterium that produces N-acylhomoserine lactones. Genomics Data. 6: 234-6. PMID 26697383 DOI: 10.1016/j.gdata.2015.10.003 |
0.31 |
|
| 2015 |
Yang S, Liu D, Wang Y, Qu F, He Y, Sun Z, Shen Q, Li W, Fu X, Deng X, Zhang W, Delwart E. Bufavirus Protoparvovirus in feces of wild rats in China. Virus Genes. PMID 26604002 DOI: 10.1007/s11262-015-1262-1 |
0.321 |
|
| 2015 |
Tan HW, Song XM, Duan WK, Wang Y, Hou XL. Genome-wide analysis of the SBP-box gene family in Chinese cabbage (Brassica rapa subsp. pekinensis). Genome / National Research Council Canada = Genome / Conseil National De Recherches Canada. 58: 463-477. PMID 26599708 DOI: 10.1139/gen-2015-0074 |
0.305 |
|
| 2015 |
Wang YZ, Mu LM, Zhang K, Yang MH, Zhang L, Du JY, Liu ZQ, Li YX, Lu WH, Chen CF, Wang Y, Chen RG, Xu J, Yuan L, Zhang WJ, et al. A broad-range survey of ticks from livestock in Northern Xinjiang: changes in tick distribution and the isolation of Borrelia burgdorferi sensu stricto. Parasites & Vectors. 8: 449. PMID 26337627 DOI: 10.1186/s13071-015-1021-0 |
0.31 |
|
| 2015 |
Huang M, Duan R, Tang T, Zhu C, Wang Y. The complete mitochondrial genome of Hyla tsinlingensis (Anura: Hylidae). Mitochondrial Dna. 1-2. PMID 25629483 DOI: 10.3109/19401736.2014.1003877 |
0.314 |
|
| 2014 |
Yang MK, Yang YH, Chen Z, Zhang J, Lin Y, Wang Y, Xiong Q, Li T, Ge F, Bryant DA, Zhao JD. Proteogenomic analysis and global discovery of posttranslational modifications in prokaryotes. Proceedings of the National Academy of Sciences of the United States of America. 111: E5633-42. PMID 25512518 DOI: 10.1073/Pnas.1412722111 |
0.33 |
|
| 2014 |
Wang Y, Tretter ED, Johnson EM, Kandel P, Lichtwardt RW, Novak SJ, Smith JF, White MM. Using a five-gene phylogeny to test morphology-based hypotheses of Smittium and allies, endosymbiotic gut fungi (Harpellales) associated with arthropods. Molecular Phylogenetics and Evolution. 79: 23-41. PMID 24933275 DOI: 10.1016/J.Ympev.2014.05.008 |
0.764 |
|
| 2014 |
Tretter ED, Johnson EM, Benny GL, Lichtwardt RW, Wang Y, Kandel P, Novak SJ, Smith JF, White MM. An eight-gene molecular phylogeny of the Kickxellomycotina, including the first phylogenetic placement of Asellariales. Mycologia. 106: 912-35. PMID 24891422 DOI: 10.3852/13-253 |
0.754 |
|
| 2014 |
Chen X, Wang Y, Shi J, Zhu L, Wang K, Xu J. [Genome-wide identification, sequence characteristic and expression analysis of heat shock factors (HSFs) in cucumber]. Yi Chuan = Hereditas. 36: 376-86. PMID 24846983 |
0.303 |
|
| 2013 |
Wang Y, Pan Y, Liu Z, Zhu X, Zhai L, Xu L, Yu R, Gong Y, Liu L. De novo transcriptome sequencing of radish (Raphanus sativus L.) and analysis of major genes involved in glucosinolate metabolism. Bmc Genomics. 14: 836. PMID 24279309 DOI: 10.1186/1471-2164-14-836 |
0.307 |
|
| 2013 |
Tretter ED, Johnson EM, Wang Y, Kandel P, White MM. Examining new phylogenetic markers to uncover the evolutionary history of early-diverging fungi: comparing MCM7, TSR1 and rRNA genes for single- and multi-gene analyses of the Kickxellomycotina. Persoonia. 30: 106-25. PMID 24027350 DOI: 10.3767/003158513X666394 |
0.674 |
|
| 2013 |
Liu GH, Gasser RB, Nejsum P, Wang Y, Chen Q, Song HQ, Zhu XQ. Mitochondrial and nuclear ribosomal DNA evidence supports the existence of a new Trichuris species in the endangered françois' leaf-monkey. Plos One. 8: e66249. PMID 23840431 DOI: 10.1371/journal.pone.0066249 |
0.319 |
|
| 2013 |
Cui H, Yu X, Wang Y, Cui Y, Li X, Liu Z, Qin S. Evolutionary origins, molecular cloning and expression of carotenoid hydroxylases in eukaryotic photosynthetic algae. Bmc Genomics. 14: 457. PMID 23834441 DOI: 10.1186/1471-2164-14-457 |
0.349 |
|
| 2013 |
Mao F, Olman V, Wang Y, Xu Y. Barcode server: a visualization-based genome analysis system. Plos One. 8: e56726. PMID 23457606 DOI: 10.1371/journal.pone.0056726 |
0.35 |
|
| 2013 |
Wang Y, Zhang WY, Zhang Z, Li J, Li ZF, Tan ZG, Zhang TT, Wu ZH, Liu H, Li YZ. Mechanisms involved in the functional divergence of duplicated GroEL chaperonins in Myxococcus xanthus DK1622. Plos Genetics. 9: e1003306. PMID 23437010 DOI: 10.1371/Journal.Pgen.1003306 |
0.308 |
|
| 2013 |
Wang X, Wang Y, Yue B, Zhang X, Liu S. The complete mitochondrial genome of the Bufo tibetanus (Anura: Bufonidae). Mitochondrial Dna. 24: 186-8. PMID 23343311 DOI: 10.3109/19401736.2012.744978 |
0.302 |
|
| 2013 |
Wang Y, Tretter ED, Lichtwardt RW, White MM. Overview of 75 years of Smittium research, establishing a new genus for Smittium culisetae, and prospects for future revisions of the 'Smittium' Claire. Mycologia. 105: 90-111. PMID 22802392 DOI: 10.3852/11-311 |
0.758 |
|
| 2012 |
Liu GH, Wang Y, Xu MJ, Zhou DH, Ye YG, Li JY, Song HQ, Lin RQ, Zhu XQ. Characterization of the complete mitochondrial genomes of two whipworms Trichuris ovis and Trichuris discolor (Nematoda: Trichuridae). Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 12: 1635-41. PMID 22926017 DOI: 10.1016/j.meegid.2012.08.005 |
0.308 |
|
| 2010 |
Zhou J, Li M, Sheng CQ, Liu L, Li Z, Wang Y, Zhou JR, Jing ZP, Chen YZ, Jiang CL. A novel strategy for development of glucocorticoids through non-genomic mechanism. Cellular and Molecular Life Sciences : Cmls. 68: 1405-14. PMID 20853130 DOI: 10.1007/s00018-010-0526-0 |
0.318 |
|
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