| Year |
Citation |
Score |
| 2021 |
McErlean P, Bell CG, Hewitt RJ, Busharat Z, Ogger PP, Ghai P, Albers GJ, Calamita E, Kingston S, Molyneaux PL, Beck S, Lloyd CM, Maher TM, Byrne AJ. DNA Methylome Alterations are Associated with Airway Macrophage Differentiation and Phenotype During Lung Fibrosis. American Journal of Respiratory and Critical Care Medicine. PMID 34280322 DOI: 10.1164/rccm.202101-0004OC |
0.466 |
|
| 2020 |
Dritsoula A, Kislikova M, Oomatia A, Webster AP, Beck S, Ponticos M, Lindsey B, Norman J, Wheeler DC, Oates T, Caplin B. "Epigenome-wide methylation profile of chronic kidney disease-derived arterial DNA uncovers novel pathways in disease-associated cardiovascular pathology." Epigenetics. 1-11. PMID 32930636 DOI: 10.1080/15592294.2020.1819666 |
0.397 |
|
| 2020 |
Teschendorff AE, Zhu T, Breeze CE, Beck S. EPISCORE: cell type deconvolution of bulk tissue DNA methylomes from single-cell RNA-Seq data. Genome Biology. 21: 221. PMID 32883324 DOI: 10.1186/S13059-020-02126-9 |
0.336 |
|
| 2020 |
Oka A, Takagi A, Komiyama E, Yoshihara N, Mano S, Hosomichi K, Suzuki S, Haida Y, Motosugi N, Hatanaka T, Kimura M, Ueda MT, Nakagawa S, Miura H, Ohtsuka M, ... ... Beck S, et al. Alopecia areata susceptibility variant in MHC region impacts expressions of genes contributing to hair keratinization and is involved in hair loss. Ebiomedicine. 57: 102810. PMID 32580135 DOI: 10.1016/J.Ebiom.2020.102810 |
0.366 |
|
| 2019 |
Bell CG, Lowe R, Adams PD, Baccarelli AA, Beck S, Bell JT, Christensen BC, Gladyshev VN, Heijmans BT, Horvath S, Ideker T, Issa JJ, Kelsey KT, Marioni RE, Reik W, et al. DNA methylation aging clocks: challenges and recommendations. Genome Biology. 20: 249. PMID 31767039 DOI: 10.1186/S13059-019-1824-Y |
0.567 |
|
| 2019 |
Chervova O, Conde L, Guerra-Assunção JA, Moghul I, Webster AP, Berner A, Larose Cadieux E, Tian Y, Voloshin V, Jesus TF, Hamoudi R, Herrero J, Beck S. The Personal Genome Project-UK, an open access resource of human multi-omics data. Scientific Data. 6: 257. PMID 31672996 DOI: 10.1038/S41597-019-0205-4 |
0.323 |
|
| 2019 |
Cardona A, Day FR, Perry JRB, Loh M, Chu AY, Lehne B, Paul DS, Lotta LA, Stewart ID, Kerrison ND, Scott RA, Khaw KT, Forouhi NG, Langenberg C, Liu C, ... ... Beck S, et al. Epigenome-Wide Association Study of Incident Type 2 Diabetes in a British Population: EPIC-Norfolk Study. Diabetes. PMID 31506343 DOI: 10.2337/Db18-0290 |
0.388 |
|
| 2019 |
Zhou L, Ng HK, Drautz-Moses DI, Schuster SC, Beck S, Kim C, Chambers JC, Loh M. Systematic evaluation of library preparation methods and sequencing platforms for high-throughput whole genome bisulfite sequencing. Scientific Reports. 9: 10383. PMID 31316107 DOI: 10.1038/S41598-019-46875-5 |
0.379 |
|
| 2019 |
Breeze CE, Reynolds AP, van Dongen J, Dunham I, Lazar J, Neph S, Vierstra J, Bourque G, Teschendorff AE, Stamatoyannopoulos JA, Beck S. eFORGE v2.0: updated analysis of cell type-specific signal in epigenomic data. Bioinformatics (Oxford, England). PMID 31161210 DOI: 10.1093/Bioinformatics/Btz456 |
0.316 |
|
| 2019 |
Kular L, Needhamsen M, Adzemovic MZ, Kramarova T, Gomez-Cabrero D, Ewing E, Piket E, Tegnér J, Beck S, Piehl F, Brundin L, Jagodic M. Neuronal methylome reveals CREB-associated neuro-axonal impairment in multiple sclerosis. Clinical Epigenetics. 11: 86. PMID 31146783 DOI: 10.1186/S13148-019-0678-1 |
0.306 |
|
| 2019 |
Dyke SOM, Saulnier KM, Dupras C, Webster AP, Maschke K, Rothstein M, Siebert R, Walter J, Beck S, Pastinen T, Joly Y. Points-to-consider on the return of results in epigenetic research. Genome Medicine. 11: 31. PMID 31122281 DOI: 10.1186/S13073-019-0646-6 |
0.321 |
|
| 2019 |
Cheung WA, Shao X, Morin A, Siroux V, Kwan T, Ge B, Aïssi D, Chen L, Vasquez L, Allum F, Guénard F, Bouzigon E, Simon MM, Boulier E, Redensek A, ... ... Beck S, et al. Correction to: Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome. Genome Biology. 20: 89. PMID 31064398 DOI: 10.1186/S13059-019-1702-7 |
0.302 |
|
| 2019 |
Nguyen HP, Stewart S, Kukwikila MN, Jones SF, Offenbartl-Stiegert D, Mao S, Balasubramanian S, Beck S, Howorka S. Opto-epigenetic modulation of DNA methylation with a photo-responsive small-molecule approach. Angewandte Chemie (International Ed. in English). PMID 30773767 DOI: 10.1002/Anie.201901139 |
0.376 |
|
| 2019 |
Teixeira VH, Pipinikas CP, Pennycuick A, Lee-Six H, Chandrasekharan D, Beane J, Morris TJ, Karpathakis A, Feber A, Breeze CE, Ntolios P, Hynds RE, Falzon M, Capitanio A, Carroll B, ... ... Beck S, et al. Deciphering the genomic, epigenomic, and transcriptomic landscapes of pre-invasive lung cancer lesions. Nature Medicine. PMID 30664780 DOI: 10.1038/S41591-018-0323-0 |
0.309 |
|
| 2018 |
Zheng SC, Breeze CE, Beck S, Teschendorff AE. Identification of differentially methylated cell types in epigenome-wide association studies. Nature Methods. 15: 1059-1066. PMID 30504870 DOI: 10.1038/S41592-018-0213-X |
0.388 |
|
| 2018 |
Beck S, Berner A, Bignell G, Bond M, Callanan M, Chervova O, Conde L, Corpas M, Ecker S, Elliott H, Fioramonti S, Flanagan A, Gaentzsch R, Graham D, Gribbin D, et al. Personal Genome Project UK (PGP-UK): a research and citizen science hybrid project in support of personalized medicine Bmc Medical Genomics. 11: 108. PMID 30482208 DOI: 10.1186/S12920-018-0423-1 |
0.343 |
|
| 2018 |
Marzi SJ, Leung SK, Ribarska T, Hannon E, Smith AR, Pishva E, Poschmann J, Moore K, Troakes C, Al-Sarraj S, Beck S, Newman S, Lunnon K, Schalkwyk LC, Mill J. A histone acetylome-wide association study of Alzheimer's disease identifies disease-associated H3K27ac differences in the entorhinal cortex. Nature Neuroscience. PMID 30349106 DOI: 10.1038/S41593-018-0253-7 |
0.328 |
|
| 2018 |
Wang Y, Karlsson R, Lampa E, Zhang Q, Hedman ÅK, Almgren M, Almqvist C, McRae AF, Marioni RE, Ingelsson E, Visscher PM, Deary IJ, Lind L, Morris T, Beck S, et al. Epigenetic influences on aging: a longitudinal genome-wide methylation study in old Swedish twins. Epigenetics. PMID 30264654 DOI: 10.1080/15592294.2018.1526028 |
0.331 |
|
| 2018 |
Webster AP, Plant D, Ecker S, Zufferey F, Bell JT, Feber A, Paul DS, Beck S, Barton A, Williams FMK, Worthington J. Increased DNA methylation variability in rheumatoid arthritis-discordant monozygotic twins. Genome Medicine. 10: 64. PMID 30176915 DOI: 10.1186/S13073-018-0575-9 |
0.376 |
|
| 2018 |
Beck S. Getting up close and personal with UK genomics and beyond. Genome Medicine. 10: 38. PMID 29793512 DOI: 10.1186/S13073-018-0552-3 |
0.306 |
|
| 2018 |
Marioni RE, Suderman M, Chen BH, Horvath S, Bandinelli S, Morris T, Beck S, Ferrucci L, Pedersen NL, Relton CL, Deary IJ, Hägg S. Tracking the Epigenetic Clock Across the Human Life Course: A Meta-analysis of Longitudinal Cohort Data. The Journals of Gerontology. Series a, Biological Sciences and Medical Sciences. PMID 29718110 DOI: 10.1093/Gerona/Gly060 |
0.335 |
|
| 2018 |
Frampton D, Schwenzer H, Marino G, Butcher LM, Pollara G, Kriston-Vizi J, Venturini C, Austin R, de Castro KF, Ketteler R, Chain B, Goldstein RA, Weiss RA, Beck S, Fassati A. Molecular Signatures of Regression of the Canine Transmissible Venereal Tumor. Cancer Cell. 33: 620-633.e6. PMID 29634949 DOI: 10.1016/J.Ccell.2018.03.003 |
0.302 |
|
| 2018 |
Thurner M, van de Bunt M, Torres JM, Mahajan A, Nylander V, Bennett AJ, Gaulton KJ, Barrett A, Burrows C, Bell CG, Lowe R, Beck S, Rakyan VK, Gloyn AL, McCarthy MI. Integration of human pancreatic islet genomic data refines regulatory mechanisms at Type 2 Diabetes susceptibility loci. Elife. 7. PMID 29412141 DOI: 10.7554/Elife.31977 |
0.613 |
|
| 2018 |
Thurner M, Bunt Mvd, Torres JM, Mahajan A, Nylander V, Bennett AJ, Gaulton KJ, Barrett A, Burrows C, Bell CG, Lowe R, Beck S, Rakyan VK, Gloyn AL, McCarthy MI. Author response: Integration of human pancreatic islet genomic data refines regulatory mechanisms at Type 2 Diabetes susceptibility loci Elife. DOI: 10.7554/Elife.31977.047 |
0.565 |
|
| 2017 |
Ecker S, Pancaldi V, Valencia A, Beck S, Paul DS. Epigenetic and Transcriptional Variability Shape Phenotypic Plasticity. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 29251357 DOI: 10.1002/Bies.201700148 |
0.325 |
|
| 2017 |
Tanić M, Beck S. Cell-free DNA: Treasure trove for cancer medicine. Nature Materials. 16: 1056-1057. PMID 29066831 DOI: 10.1038/Nmat5019 |
0.305 |
|
| 2017 |
Tian Y, Morris TJ, Webster AP, Yang Z, Beck S, Feber A, Teschendorff AE. ChAMP: Updated Methylation Analysis Pipeline for Illumina BeadChips. Bioinformatics (Oxford, England). PMID 28961746 DOI: 10.1093/Bioinformatics/Btx513 |
0.32 |
|
| 2017 |
Barrett JE, Feber A, Herrero J, Tanic M, Wilson GA, Swanton C, Beck S. Quantification of tumour evolution and heterogeneity via Bayesian epiallele detection. Bmc Bioinformatics. 18: 354. PMID 28743252 DOI: 10.1186/S12859-017-1753-2 |
0.369 |
|
| 2017 |
Oka A, Asano Y, Hasegawa M, Fujimoto M, Ishikawa O, Kuwana M, Kawaguchi Y, Yamamoto T, Takahashi H, Goto D, Endo H, Jinnin M, Mano S, Hosomichi K, Mabuchi T, ... ... Beck S, et al. RXRB is a MHC-encoded susceptibility gene associated with anti-topoisomerase I antibody-positive systemic sclerosis. The Journal of Investigative Dermatology. PMID 28506627 DOI: 10.1016/J.Jid.2017.04.028 |
0.332 |
|
| 2017 |
Pan S, Lai H, Shen Y, Breeze C, Beck S, Hong T, Wang C, Teschendorff AE. DNA methylome analysis reveals distinct epigenetic patterns of ascending aortic dissection and bicuspid aortic valve. Cardiovascular Research. PMID 28444195 DOI: 10.1093/Cvr/Cvx050 |
0.33 |
|
| 2017 |
Kling T, Wenger A, Beck S, Carén H. Validation of the MethylationEPIC BeadChip for fresh-frozen and formalin-fixed paraffin-embedded tumours. Clinical Epigenetics. 9: 33. PMID 28392843 DOI: 10.1186/S13148-017-0333-7 |
0.331 |
|
| 2017 |
Tanić M, Beck S. Epigenome-wide association studies for cancer biomarker discovery in circulating cell-free DNA: technical advances and challenges. Current Opinion in Genetics & Development. 42: 48-55. PMID 28391083 DOI: 10.1016/J.Gde.2017.01.017 |
0.358 |
|
| 2017 |
Feber A, Dhami P, Dong L, de Winter P, Tan WS, Martínez-Fernández M, Paul DS, Hynes-Allen A, Rezaee S, Gurung P, Rodney S, Mehmood A, Villacampa F, de la Rosa F, Jameson C, ... ... Beck S, et al. UroMark-a urinary biomarker assay for the detection of bladder cancer. Clinical Epigenetics. 9: 8. PMID 28163793 DOI: 10.1186/S13148-016-0303-5 |
0.325 |
|
| 2017 |
Ecker S, Chen L, Pancaldi V, Bagger FO, Fernández JM, Carrillo de Santa Pau E, Juan D, Mann AL, Watt S, Casale FP, Sidiropoulos N, Rapin N, Merkel A, Stunnenberg HG, ... ... Beck S, et al. Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types. Genome Biology. 18: 18. PMID 28126036 DOI: 10.1186/S13059-017-1156-8 |
0.323 |
|
| 2016 |
Paul DS, Teschendorff AE, Dang MA, Lowe R, Hawa MI, Ecker S, Beyan H, Cunningham S, Fouts AR, Ramelius A, Burden F, Farrow S, Rowlston S, Rehnstrom K, Frontini M, ... ... Beck S, et al. Increased DNA methylation variability in type 1 diabetes across three immune effector cell types. Nature Communications. 7: 13555. PMID 27898055 DOI: 10.1038/Ncomms13555 |
0.357 |
|
| 2016 |
Astle WJ, Elding H, Jiang T, Allen D, Ruklisa D, Mann AL, Mead D, Bouman H, Riveros-Mckay F, Kostadima MA, Lambourne JJ, Sivapalaratnam S, Downes K, Kundu K, Bomba L, ... ... Beck S, et al. The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease. Cell. 167: 1415-1429.e19. PMID 27863252 DOI: 10.1016/J.Cell.2016.10.042 |
0.346 |
|
| 2016 |
Chen L, Ge B, Casale FP, Vasquez L, Kwan T, Garrido-Martín D, Watt S, Yan Y, Kundu K, Ecker S, Datta A, Richardson D, Burden F, Mead D, Mann AL, ... ... Beck S, et al. Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells. Cell. 167: 1398-1414.e24. PMID 27863251 DOI: 10.1016/J.Cell.2016.10.026 |
0.37 |
|
| 2016 |
Breeze CE, Paul DS, van Dongen J, Butcher LM, Ambrose JC, Barrett JE, Lowe R, Rakyan VK, Iotchkova V, Frontini M, Downes K, Ouwehand WH, Laperle J, Jacques PÉ, Bourque G, ... ... Beck S, et al. eFORGE: A Tool for Identifying Cell Type-Specific Signal in Epigenomic Data. Cell Reports. 17: 2137-2150. PMID 27851974 DOI: 10.1016/J.Celrep.2016.10.059 |
0.383 |
|
| 2016 |
Libertini E, Heath SC, Hamoudi RA, Gut M, Ziller MJ, Herrero J, Czyz A, Ruotti V, Stunnenberg HG, Frontini M, Ouwehand WH, Meissner A, Gut IG, Beck S. Saturation analysis for whole-genome bisulfite sequencing data. Nature Biotechnology. PMID 27347755 DOI: 10.1038/Nbt.3524 |
0.342 |
|
| 2016 |
Libertini E, Heath SC, Hamoudi RA, Gut M, Ziller MJ, Czyz A, Ruotti V, Stunnenberg HG, Frontini M, Ouwehand WH, Meissner A, Gut IG, Beck S. Information recovery from low coverage whole-genome bisulfite sequencing. Nature Communications. 7: 11306. PMID 27346250 DOI: 10.1038/Ncomms11306 |
0.374 |
|
| 2016 |
Feber A, Worth DC, Chakravarthy A, de Winter P, Shah K, Arya M, Saqib M, Nigam R, Malone PR, Tan WS, Rodney S, Freeman A, Jameson C, Wilson GA, Powles T, ... Beck S, et al. CSN1 somatic mutations in penile squamous cell carcinoma. Cancer Research. PMID 27325650 DOI: 10.1158/0008-5472.Can-15-3134 |
0.337 |
|
| 2016 |
Bartlett TE, Chindera K, McDermott J, Breeze CE, Cooke WR, Jones A, Reisel D, Karegodar ST, Arora R, Beck S, Menon U, Dubeau L, Widschwendter M. Epigenetic reprogramming of fallopian tube fimbriae in BRCA mutation carriers defines early ovarian cancer evolution. Nature Communications. 7: 11620. PMID 27216078 DOI: 10.1038/Ncomms11620 |
0.305 |
|
| 2016 |
van Dongen J, Nivard MG, Willemsen G, Hottenga JJ, Helmer Q, Dolan CV, Ehli EA, Davies GE, van Iterson M, Breeze CE, Beck S, Suchiman HE, Jansen R, van Meurs JB, et al. Genetic and environmental influences interact with age and sex in shaping the human methylome. Nature Communications. 7: 11115. PMID 27051996 DOI: 10.1038/Ncomms11115 |
0.37 |
|
| 2016 |
Chen Y, Breeze CE, Zhen S, Beck S, Teschendorff AE. Tissue-independent and tissue-specific patterns of DNA methylation alteration in cancer. Epigenetics & Chromatin. 9: 10. PMID 26958079 DOI: 10.1186/S13072-016-0058-4 |
0.392 |
|
| 2016 |
Butcher LM, Ito M, Brimpari M, Morris TJ, Soares FA, Ährlund-Richter L, Carey N, Vallier L, Ferguson-Smith AC, Beck S. Non-CG DNA methylation is a biomarker for assessing endodermal differentiation capacity in pluripotent stem cells. Nature Communications. 7: 10458. PMID 26822956 DOI: 10.1038/Ncomms10458 |
0.328 |
|
| 2016 |
Olsson M, Beck S, Kogner P, Martinsson T, Carén H. Genome-wide methylation profiling identifies novel methylated genes in neuroblastoma tumors. Epigenetics. 11: 74-84. PMID 26786290 DOI: 10.1080/15592294.2016.1138195 |
0.367 |
|
| 2016 |
Tanic M, Rodney S, Barrett J, Parker H, Feber A, Beck S. Abstract 4530: EpiCapture: Benchmarking commercially available targeted bisulfite-sequencing platforms to gold-standard whole genome bisulfite sequencing Cancer Research. 76: 4530-4530. DOI: 10.1158/1538-7445.Am2016-4530 |
0.325 |
|
| 2016 |
Bock C, Halbritter F, Carmona FJ, Tierling S, Datlinger P, Assenov Y, Berdasco M, Bergmann AK, Booher K, Busato F, Campan M, Dahl C, Dahmcke CM, Diep D, Fernández AF, ... ... Beck S, et al. Quantitative comparison of DNA methylation assays for biomarker development and clinical applications Nature Biotechnology. 34: 726-737. DOI: 10.1038/Nbt.3605 |
0.365 |
|
| 2015 |
Libertini E, Lebreton A, Lakisic G, Dillies MA, Beck S, Coppée JY, Cossart P, Bierne H. Overexpression of the Heterochromatinization Factor BAHD1 in HEK293 Cells Differentially Reshapes the DNA Methylome on Autosomes and X Chromosome. Frontiers in Genetics. 6: 339. PMID 26648976 DOI: 10.3389/Fgene.2015.00339 |
0.408 |
|
| 2015 |
Carén H, Stricker SH, Bulstrode H, Gagrica S, Johnstone E, Bartlett TE, Feber A, Wilson G, Teschendorff AE, Bertone P, Beck S, Pollard SM. Glioblastoma Stem Cells Respond to Differentiation Cues but Fail to Undergo Commitment and Terminal Cell-Cycle Arrest. Stem Cell Reports. PMID 26607953 DOI: 10.1016/J.Stemcr.2015.09.014 |
0.306 |
|
| 2015 |
Dyke SO, Cheung WA, Joly Y, Ammerpohl O, Lutsik P, Rothstein MA, Caron M, Busche S, Bourque G, Rönnblom L, Flicek P, Beck S, Hirst M, Stunnenberg H, Siebert R, et al. Epigenome data release: a participant-centered approach to privacy protection. Genome Biology. 16: 142. PMID 26185018 DOI: 10.1186/S13059-015-0723-0 |
0.35 |
|
| 2015 |
Karpathakis A, Dibra H, Pipinikas C, Feber A, Morris T, Francis JM, Oukrif D, Mandair D, Pericleous M, Mohmaduvesh M, Serra S, Ogunbiyi O, Novelli M, Luong T, Asa SL, ... ... Beck S, et al. Prognostic impact of novel molecular subtypes of small intestinal neuroendocrine tumour. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 26169971 DOI: 10.1158/1078-0432.Ccr-15-0373 |
0.334 |
|
| 2015 |
Butcher LM, Beck S. Nano-MeDIP-seq Methylome Analysis Using Low DNA Concentrations. Methods in Molecular Biology (Clifton, N.J.). PMID 26138987 DOI: 10.1007/7651_2015_259 |
0.423 |
|
| 2015 |
Pipinikas CP, Dibra H, Karpathakis A, Feber A, Novelli M, Oukrif D, Fusai G, Valente R, Caplin M, Meyer T, Teschendorff A, Bell C, Morris TJ, Salomoni P, Luong TV, ... ... Beck S, et al. Epigenetic dysregulation and poorer prognosis in DAXX-deficient pancreatic neuroendocrine tumours. Endocrine-Related Cancer. 22: L13-8. PMID 25900181 DOI: 10.1530/Erc-15-0108 |
0.524 |
|
| 2015 |
Charlton J, Williams RD, Sebire NJ, Popov S, Vujanic G, Chagtai T, Alcaide-German M, Morris T, Butcher LM, Guilhamon P, Beck S, Pritchard-Jones K. Comparative methylome analysis identifies new tumour subtypes and biomarkers for transformation of nephrogenic rests into Wilms tumour. Genome Medicine. 7: 11. PMID 25763109 DOI: 10.1186/S13073-015-0136-4 |
0.31 |
|
| 2015 |
Field SF, Beraldi D, Bachman M, Stewart SK, Beck S, Balasubramanian S. Accurate measurement of 5-methylcytosine and 5-hydroxymethylcytosine in human cerebellum DNA by oxidative bisulfite on an array (OxBS-array). Plos One. 10: e0118202. PMID 25706862 DOI: 10.1371/Journal.Pone.0118202 |
0.302 |
|
| 2015 |
Yuan T, Jiao Y, de Jong S, Ophoff RA, Beck S, Teschendorff AE. An integrative multi-scale analysis of the dynamic DNA methylation landscape in aging. Plos Genetics. 11: e1004996. PMID 25692570 DOI: 10.1371/Journal.Pgen.1004996 |
0.398 |
|
| 2015 |
Feber A, Arya M, de Winter P, Saqib M, Nigam R, Malone PR, Tan WS, Rodney S, Lechner M, Freeman A, Jameson C, Muneer A, Beck S, Kelly JD. Epigenetics markers of metastasis and HPV-induced tumorigenesis in penile cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 21: 1196-206. PMID 25538261 DOI: 10.1158/1078-0432.Ccr-14-1656 |
0.308 |
|
| 2015 |
Butcher LM, Beck S. Probe Lasso: a novel method to rope in differentially methylated regions with 450K DNA methylation data. Methods (San Diego, Calif.). 72: 21-8. PMID 25461817 DOI: 10.1016/J.Ymeth.2014.10.036 |
0.39 |
|
| 2015 |
Morris TJ, Beck S. Analysis pipelines and packages for Infinium HumanMethylation450 BeadChip (450k) data. Methods (San Diego, Calif.). 72: 3-8. PMID 25233806 DOI: 10.1016/J.Ymeth.2014.08.011 |
0.34 |
|
| 2014 |
Karpathakis A, Feber A, Morris T, Dibra H, Pipinikas C, Oukrife D, Francis J, Mandair D, Toumpanakis C, Meyer T, Luong TV, Caplin M, Meyerson M, Beck S, Thirlwell C. 1133OMOLECULAR PROFILING OF SMALL INTESTINAL NEUROENDOCRINE TUMOURS. Annals of Oncology : Official Journal of the European Society For Medical Oncology. 25: iv394. PMID 28171426 DOI: 10.1093/Annonc/Mdu345.2 |
0.336 |
|
| 2014 |
Swanton C, Beck S. Epigenetic noise fuels cancer evolution. Cancer Cell. 26: 775-6. PMID 25490439 DOI: 10.1016/J.Ccell.2014.11.003 |
0.363 |
|
| 2014 |
Paul DS, Beck S. Advances in epigenome-wide association studies for common diseases. Trends in Molecular Medicine. 20: 541-3. PMID 25092140 DOI: 10.1016/J.Molmed.2014.07.002 |
0.324 |
|
| 2014 |
Teschendorff AE, Liu X, Caren H, Pollard SM, Beck S, Widschwendter M, Chen L. The dynamics of DNA methylation covariation patterns in carcinogenesis. Plos Computational Biology. 10: e1003709. PMID 25010556 DOI: 10.1371/Journal.Pcbi.1003709 |
0.384 |
|
| 2014 |
Beck S, Ng T. C2c: turning cancer into chronic disease. Genome Medicine. 6: 38. PMID 24944585 DOI: 10.1186/Gm555 |
0.301 |
|
| 2014 |
Salomonsen J, Chattaway JA, Chan AC, Parker A, Huguet S, Marston DA, Rogers SL, Wu Z, Smith AL, Staines K, Butter C, Riegert P, Vainio O, Nielsen L, Kaspers B, ... ... Beck S, et al. Sequence of a complete chicken BG haplotype shows dynamic expansion and contraction of two gene lineages with particular expression patterns. Plos Genetics. 10: e1004417. PMID 24901252 DOI: 10.1371/Journal.Pgen.1004417 |
0.366 |
|
| 2014 |
Steegenga WT, Boekschoten MV, Lute C, Hooiveld GJ, de Groot PJ, Morris TJ, Teschendorff AE, Butcher LM, Beck S, Müller M. Genome-wide age-related changes in DNA methylation and gene expression in human PBMCs. Age (Dordrecht, Netherlands). 36: 9648. PMID 24789080 DOI: 10.1007/S11357-014-9648-X |
0.381 |
|
| 2014 |
Wilson GA, Butcher LM, Foster HR, Feber A, Roos C, Walter L, Woszczek G, Beck S, Bell CG. Human-specific epigenetic variation in the immunological Leukotriene B4 Receptor (LTB4R/BLT1) implicated in common inflammatory diseases. Genome Medicine. 6: 19. PMID 24598577 DOI: 10.1186/Gm536 |
0.589 |
|
| 2014 |
Bell CG, Wilson GA, Beck S. Human-specific CpG 'beacons' identify human-specific prefrontal cortex H3K4me3 chromatin peaks. Epigenomics. 6: 21-31. PMID 24579944 DOI: 10.2217/Epi.13.74 |
0.591 |
|
| 2014 |
Paul DS, Guilhamon P, Karpathakis A, Butcher LM, Thirlwell C, Feber A, Beck S. Assessment of RainDrop BS-seq as a method for large-scale, targeted bisulfite sequencing. Epigenetics : Official Journal of the Dna Methylation Society. 9: 678-84. PMID 24518816 DOI: 10.4161/Epi.28041 |
0.392 |
|
| 2014 |
Bell JT, Loomis AK, Butcher LM, Gao F, Zhang B, Hyde CL, Sun J, Wu H, Ward K, Harris J, Scollen S, Davies MN, Schalkwyk LC, Mill J, ... ... Beck S, et al. Differential methylation of the TRPA1 promoter in pain sensitivity. Nature Communications. 5: 2978. PMID 24496475 DOI: 10.1038/Ncomms3978 |
0.306 |
|
| 2014 |
Feber A, Guilhamon P, Lechner M, Fenton T, Wilson GA, Thirlwell C, Morris TJ, Flanagan AM, Teschendorff AE, Kelly JD, Beck S. Using high-density DNA methylation arrays to profile copy number alterations. Genome Biology. 15: R30. PMID 24490765 DOI: 10.1186/Gb-2014-15-2-R30 |
0.368 |
|
| 2014 |
Morris TJ, Butcher LM, Feber A, Teschendorff AE, Chakravarthy AR, Wojdacz TK, Beck S. ChAMP: 450k Chip Analysis Methylation Pipeline. Bioinformatics (Oxford, England). 30: 428-30. PMID 24336642 DOI: 10.1093/Bioinformatics/Btt684 |
0.349 |
|
| 2014 |
Paul DS, Soranzo N, Beck S. Functional interpretation of non-coding sequence variation: concepts and challenges. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 36: 191-9. PMID 24311363 DOI: 10.1002/Bies.201300126 |
0.372 |
|
| 2014 |
Karpathakis A, Dibra H, Morris T, Oukrife D, Pipinikas CP, Pearce K, Francis J, Pericleous M, Mandair D, Feber A, Toumpanakis C, Luong TV, Meyerson M, Caplin ME, Beck S, et al. Genome-wide DNA methylation profiling of gastrointestinal neuroendocrine tumors to identify hypermethylation of mTOR, Wnt, and Notch pathways in GI NET pathogenesis. Journal of Clinical Oncology. 32: 212-212. DOI: 10.1200/Jco.2014.32.3_Suppl.212 |
0.365 |
|
| 2013 |
Taiwo O, Wilson GA, Emmett W, Morris T, Bonnet D, Schuster E, Adejumo T, Beck S, Pearce DJ. DNA methylation analysis of murine hematopoietic side population cells during aging. Epigenetics : Official Journal of the Dna Methylation Society. 8: 1114-22. PMID 23949429 DOI: 10.4161/Epi.26017 |
0.347 |
|
| 2013 |
Teschendorff AE, West J, Beck S. Age-associated epigenetic drift: implications, and a case of epigenetic thrift? Human Molecular Genetics. 22: R7-R15. PMID 23918660 DOI: 10.1093/Hmg/Ddt375 |
0.357 |
|
| 2013 |
Guilhamon P, Eskandarpour M, Halai D, Wilson GA, Feber A, Teschendorff AE, Gomez V, Hergovich A, Tirabosco R, Fernanda Amary M, Baumhoer D, Jundt G, Ross MT, Flanagan AM, Beck S. Meta-analysis of IDH-mutant cancers identifies EBF1 as an interaction partner for TET2. Nature Communications. 4: 2166. PMID 23863747 DOI: 10.1038/Ncomms3166 |
0.329 |
|
| 2013 |
Wilming LG, Hart EA, Coggill PC, Horton R, Gilbert JG, Clee C, Jones M, Lloyd C, Palmer S, Sims S, Whitehead S, Wiley D, Beck S, Harrow JL. Sequencing and comparative analysis of the gorilla MHC genomic sequence. Database : the Journal of Biological Databases and Curation. 2013: bat011. PMID 23589541 DOI: 10.1093/Database/Bat011 |
0.389 |
|
| 2013 |
West J, Beck S, Wang X, Teschendorff AE. An integrative network algorithm identifies age-associated differential methylation interactome hotspots targeting stem-cell differentiation pathways. Scientific Reports. 3: 1630. PMID 23568264 DOI: 10.1038/Srep01630 |
0.342 |
|
| 2013 |
Stricker SH, Feber A, Engström PG, Carén H, Kurian KM, Takashima Y, Watts C, Way M, Dirks P, Bertone P, Smith A, Beck S, Pollard SM. Widespread resetting of DNA methylation in glioblastoma-initiating cells suppresses malignant cellular behavior in a lineage-dependent manner. Genes & Development. 27: 654-69. PMID 23512659 DOI: 10.1101/Gad.212662.112 |
0.371 |
|
| 2013 |
Teschendorff AE, Marabita F, Lechner M, Bartlett T, Tegner J, Gomez-Cabrero D, Beck S. A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data. Bioinformatics (Oxford, England). 29: 189-96. PMID 23175756 DOI: 10.1093/Bioinformatics/Bts680 |
0.332 |
|
| 2013 |
Carén H, Pollard SM, Beck S. The good, the bad and the ugly: epigenetic mechanisms in glioblastoma. Molecular Aspects of Medicine. 34: 849-62. PMID 22771539 DOI: 10.1016/J.Mam.2012.06.007 |
0.376 |
|
| 2013 |
Charlton J, Williams R, Alcaide-German M, Sebire N, Popov S, Pritchard-Jones K, Beck S. Abstract B36: DNA methylation profiling describes Wilms tumor evolution from its precursor lesion Cancer Research. 73. DOI: 10.1158/1538-7445.Cec13-B36 |
0.362 |
|
| 2012 |
Wilson GA, Dhami P, Feber A, Cortázar D, Suzuki Y, Schulz R, Schär P, Beck S. Resources for methylome analysis suitable for gene knockout studies of potential epigenome modifiers. Gigascience. 1: 3. PMID 23587164 DOI: 10.1186/2047-217X-1-3 |
0.45 |
|
| 2012 |
Beck S, Bernstein BE, Campbell RM, Costello JF, Dhanak D, Ecker JR, Greally JM, Issa JP, Laird PW, Polyak K, Tycko B, Jones PA. A blueprint for an international cancer epigenome consortium. A report from the AACR Cancer Epigenome Task Force. Cancer Research. 72: 6319-24. PMID 23188507 DOI: 10.1158/0008-5472.Can-12-3658 |
0.314 |
|
| 2012 |
Thirlwell C, Feber A, Lechner M, Teschendorff AE, Beck S. Comments on: Interpretation of genome-wide infinium methylation data from ligated DNA in formalin-fixed paraffin-embedded paired tumor and normal tissue. Bmc Research Notes. 5: 631. PMID 23148593 DOI: 10.1186/1756-0500-5-631 |
0.375 |
|
| 2012 |
Bell CG, Wilson GA, Butcher LM, Roos C, Walter L, Beck S. Human-specific CpG "beacons" identify loci associated with human-specific traits and disease. Epigenetics : Official Journal of the Dna Methylation Society. 7: 1188-99. PMID 22968434 DOI: 10.4161/Epi.22127 |
0.632 |
|
| 2012 |
Häsler R, Feng Z, Bäckdahl L, Spehlmann ME, Franke A, Teschendorff A, Rakyan VK, Down TA, Wilson GA, Feber A, Beck S, Schreiber S, Rosenstiel P. A functional methylome map of ulcerative colitis. Genome Research. 22: 2130-7. PMID 22826509 DOI: 10.1101/Gr.138347.112 |
0.382 |
|
| 2012 |
Taiwo O, Wilson GA, Morris T, Seisenberger S, Reik W, Pearce D, Beck S, Butcher LM. Methylome analysis using MeDIP-seq with low DNA concentrations. Nature Protocols. 7: 617-36. PMID 22402632 DOI: 10.1038/Nprot.2012.012 |
0.382 |
|
| 2011 |
Thirlwell C, Schulz L, Dibra H, Beck S. Suffocating cancer: hypoxia-associated epimutations as targets for cancer therapy. Clinical Epigenetics. 3: 9. PMID 22414300 DOI: 10.1186/1868-7083-3-9 |
0.32 |
|
| 2011 |
Cortese R, Lewin J, Bäckdahl L, Krispin M, Wasserkort R, Eckhardt F, Beck S. Genome-wide screen for differential DNA methylation associated with neural cell differentiation in mouse. Plos One. 6: e26002. PMID 22028803 DOI: 10.1371/Journal.Pone.0026002 |
0.386 |
|
| 2011 |
Rakyan VK, Beyan H, Down TA, Hawa MI, Maslau S, Aden D, Daunay A, Busato F, Mein CA, Manfras B, Dias KR, Bell CG, Tost J, Boehm BO, Beck S, et al. Identification of type 1 diabetes-associated DNA methylation variable positions that precede disease diagnosis. Plos Genetics. 7: e1002300. PMID 21980303 DOI: 10.1371/Journal.Pgen.1002300 |
0.605 |
|
| 2011 |
Siddle HV, Deakin JE, Coggill P, Whilming LG, Harrow J, Kaufman J, Beck S, Belov K. The tammar wallaby major histocompatibility complex shows evidence of past genomic instability. Bmc Genomics. 12: 421. PMID 21854592 DOI: 10.1186/1471-2164-12-421 |
0.357 |
|
| 2011 |
Rakyan VK, Down TA, Balding DJ, Beck S. Epigenome-wide association studies for common human diseases. Nature Reviews. Genetics. 12: 529-41. PMID 21747404 DOI: 10.1038/Nrg3000 |
0.409 |
|
| 2011 |
Feber A, Wilson GA, Zhang L, Presneau N, Idowu B, Down TA, Rakyan VK, Noon LA, Lloyd AC, Stupka E, Schiza V, Teschendorff AE, Schroth GP, Flanagan A, Beck S. Comparative methylome analysis of benign and malignant peripheral nerve sheath tumors. Genome Research. 21: 515-24. PMID 21324880 DOI: 10.1101/Gr.109678.110 |
0.402 |
|
| 2011 |
Lechner MA, Feber A, Teschendorff A, Boshoff C, Wilson G, Butcher LM, Beck S. Methylome Analysis of HPV-Associated Head and Neck Cancer Otolaryngology-Head and Neck Surgery. 145. DOI: 10.1177/0194599811415823A121 |
0.348 |
|
| 2010 |
Bell CG, Finer S, Lindgren CM, Wilson GA, Rakyan VK, Teschendorff AE, Akan P, Stupka E, Down TA, Prokopenko I, Morison IM, Mill J, Pidsley R, Deloukas P, ... ... Beck S, et al. Integrated genetic and epigenetic analysis identifies haplotype-specific methylation in the FTO type 2 diabetes and obesity susceptibility locus. Plos One. 5: e14040. PMID 21124985 DOI: 10.1371/Journal.Pone.0014040 |
0.629 |
|
| 2010 |
Li Y, Zhu J, Tian G, Li N, Li Q, Ye M, Zheng H, Yu J, Wu H, Sun J, Zhang H, Chen Q, Luo R, Chen M, He Y, ... ... Beck S, et al. The DNA methylome of human peripheral blood mononuclear cells. Plos Biology. 8: e1000533. PMID 21085693 DOI: 10.1371/Journal.Pbio.1000533 |
0.428 |
|
| 2010 |
Bell CG, Beck S. The epigenomic interface between genome and environment in common complex diseases. Briefings in Functional Genomics. 9: 477-85. PMID 21062751 DOI: 10.1093/Bfgp/Elq026 |
0.631 |
|
| 2010 |
Beck S. Taking the measure of the methylome. Nature Biotechnology. 28: 1026-1028. PMID 20944589 DOI: 10.1038/Nbt1010-1026 |
0.336 |
|
| 2010 |
Lechner M, Boshoff C, Beck S. 9 - Cancer Epigenome Advances in Genetics. 70. PMID 20920751 DOI: 10.1016/B978-0-12-380866-0.60009-5 |
0.393 |
|
| 2010 |
Bell CG, Teschendorff AE, Rakyan VK, Maxwell AP, Beck S, Savage DA. Genome-wide DNA methylation analysis for diabetic nephropathy in type 1 diabetes mellitus. Bmc Medical Genomics. 3: 33. PMID 20687937 DOI: 10.1186/1755-8794-3-33 |
0.532 |
|
| 2010 |
Xiang H, Zhu J, Chen Q, Dai F, Li X, Li M, Zhang H, Zhang G, Li D, Dong Y, Zhao L, Lin Y, Cheng D, Yu J, Sun J, ... ... Beck S, et al. Single base-resolution methylome of the silkworm reveals a sparse epigenomic map. Nature Biotechnology. 28: 516-20. PMID 20436463 DOI: 10.1038/Nbt.1626 |
0.436 |
|
| 2010 |
Thirlwell C, Eymard M, Feber A, Teschendorff A, Pearce K, Lechner M, Widschwendter M, Beck S. Genome-wide DNA methylation analysis of archival formalin-fixed paraffin-embedded tissue using the Illumina Infinium HumanMethylation27 BeadChip. Methods (San Diego, Calif.). 52: 248-54. PMID 20434562 DOI: 10.1016/J.Ymeth.2010.04.012 |
0.435 |
|
| 2010 |
Butcher LM, Beck S. AutoMeDIP-seq: a high-throughput, whole genome, DNA methylation assay. Methods. 52: 223-231. PMID 20385236 DOI: 10.1016/J.Ymeth.2010.04.003 |
0.418 |
|
| 2010 |
Teschendorff AE, Menon U, Gentry-Maharaj A, Ramus SJ, Weisenberger DJ, Shen H, Campan M, Noushmehr H, Bell CG, Maxwell AP, Savage DA, Mueller-Holzner E, Marth C, Kocjan G, Gayther SA, ... ... Beck S, et al. Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer. Genome Research. 20: 440-6. PMID 20219944 DOI: 10.1101/Gr.103606.109 |
0.594 |
|
| 2010 |
Novakovic B, Wong NC, Sibson M, Ng HK, Morley R, Manuelpillai U, Down T, Rakyan VK, Beck S, Hiendleder S, Roberts CT, Craig JM, Saffery R. DNA methylation-mediated down-regulation of DNA methyltransferase-1 (DNMT1) is coincident with, but not essential for, global hypomethylation in human placenta. The Journal of Biological Chemistry. 285: 9583-93. PMID 20071334 DOI: 10.1074/Jbc.M109.064956 |
0.42 |
|
| 2010 |
Bell CG, Finer S, Lindgren CM, Wilson GA, Rakyan VK, Teschendorff AE, Akan P, Stupka E, Down TA, Prokopenko I, Morison IM, Mill J, Pidsley R, Deloukas P, Frayling TM, ... ... Beck S, et al. LD relationship for FTO Association SNPs and rs7202116. Plos One. DOI: 10.1371/Journal.Pone.0014040.T004 |
0.497 |
|
| 2009 |
Cheng Y, Wakefield M, Siddle HV, Coggill PC, Herbert CA, Beck S, Belov K, Eldridge MD. Isolation and characterization of 10 MHC Class I-associated microsatellite loci in tammar wallaby (Macropus eugenii). Molecular Ecology Resources. 9: 346-9. PMID 21564646 DOI: 10.1111/J.1755-0998.2008.02401.X |
0.328 |
|
| 2009 |
Teschendorff AE, Menon U, Gentry-Maharaj A, Ramus SJ, Gayther SA, Apostolidou S, Jones A, Lechner M, Beck S, Jacobs IJ, Widschwendter M. An epigenetic signature in peripheral blood predicts active ovarian cancer. Plos One. 4: e8274. PMID 20019873 DOI: 10.1371/Journal.Pone.0008274 |
0.342 |
|
| 2009 |
Pollard SM, Stricker SH, Beck S. Preview. A shore sign of reprogramming. Cell Stem Cell. 5: 571-2. PMID 19951682 DOI: 10.1016/J.Stem.2009.11.006 |
0.367 |
|
| 2009 |
Siddle HV, Deakin JE, Coggill P, Hart E, Cheng Y, Wong ES, Harrow J, Beck S, Belov K. MHC-linked and un-linked class I genes in the wallaby. Bmc Genomics. 10: 310. PMID 19602235 DOI: 10.1186/1471-2164-10-310 |
0.319 |
|
| 2009 |
Bäckdahl L, Herberth M, Wilson G, Tate P, Campos LS, Cortese R, Eckhardt F, Beck S. Gene body methylation of the dimethylarginine dimethylamino-hydrolase 2 (Ddah2) gene is an epigenetic biomarker for neural stem cell differentiation. Epigenetics. 4: 248-54. PMID 19535899 DOI: 10.4161/Epi.9093 |
0.39 |
|
| 2009 |
Bell CG, Beck S. Advances in the identification and analysis of allele-specific expression. Genome Medicine. 1: 56. PMID 19490587 DOI: 10.1186/Gm56 |
0.618 |
|
| 2009 |
Papageorgiou EA, Fiegler H, Rakyan V, Beck S, Hultén MA, Lamnissou K, Carter NP, Patsalis PC. Sites of differential DNA methylation between placenta and peripheral blood: molecular markers for noninvasive prenatal diagnosis of aneuploidies. American Journal of Pathology. 174: 1609-1618. PMID 19349366 DOI: 10.2353/Ajpath.2009.081038 |
0.384 |
|
| 2009 |
Dennis MY, Paracchini S, Scerri TS, Prokunina-Olsson L, Knight JC, Wade-Martins R, Coggill P, Beck S, Green ED, Monaco AP. A common variant associated with dyslexia reduces expression of the KIAA0319 gene. Plos Genetics. 5: e1000436. PMID 19325871 DOI: 10.1371/Journal.Pgen.1000436 |
0.342 |
|
| 2009 |
Novakovic B, Sibson M, Ng HK, Manuelpillai U, Rakyan V, Down T, Beck S, Fournier T, Evain-Brion D, Dimitriadis E, Craig JM, Morley R, Saffery R. Placenta-specific methylation of the vitamin D 24-hydroxylase gene: implications for feedback autoregulation of active vitamin D levels at the fetomaternal interface. The Journal of Biological Chemistry. 284: 14838-48. PMID 19237542 DOI: 10.1074/Jbc.M809542200 |
0.301 |
|
| 2009 |
Bäckdahl L, Bushell A, Beck S. Inflammatory signalling as mediator of epigenetic modulation in tissue-specific chronic inflammation. The International Journal of Biochemistry & Cell Biology. 41: 176-184. PMID 18793748 DOI: 10.1016/J.Biocel.2008.08.023 |
0.323 |
|
| 2008 |
Ottaviani D, Lever E, Mitter R, Jones T, Forshew T, Christova R, Tomazou EM, Rakyan VK, Krawetz SA, Platts AE, Segarane B, Beck S, Sheer D. Reconfiguration of genomic anchors upon transcriptional activation of the human major histocompatibility complex. Genome Research. 18: 1778-86. PMID 18849521 DOI: 10.1101/Gr.082313.108 |
0.401 |
|
| 2008 |
Novakovic B, Rakyan V, Ng HK, Manuelpillai U, Dewi C, Wong NC, Morley R, Down T, Beck S, Craig JM, Saffery R. Specific tumour-associated methylation in normal human term placenta and first-trimester cytotrophoblasts. Molecular Human Reproduction. 14: 547-54. PMID 18708652 DOI: 10.1093/Molehr/Gan046 |
0.394 |
|
| 2008 |
Butcher LM, Beck S. Future impact of integrated high-throughput methylome analyses on human health and disease Journal of Genetics and Genomics. 35: 391-401. PMID 18640619 DOI: 10.1016/S1673-8527(08)60057-0 |
0.432 |
|
| 2008 |
Down TA, Rakyan VK, Turner DJ, Flicek P, Li H, Kulesha E, Gräf S, Johnson N, Herrero J, Tomazou EM, Thorne NP, Bäckdahl L, Herberth M, Howe KL, Jackson DK, ... ... Beck S, et al. A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis. Nature Biotechnology. 26: 779-85. PMID 18612301 DOI: 10.1038/Nbt1414 |
0.419 |
|
| 2008 |
Rakyan VK, Down TA, Thorne NP, Flicek P, Kulesha E, Gräf S, Tomazou EM, Bäckdahl L, Johnson N, Herberth M, Howe KL, Jackson DK, Miretti MM, Fiegler H, Marioni JC, ... ... Beck S, et al. An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs). Genome Research. 18: 1518-29. PMID 18577705 DOI: 10.1101/Gr.077479.108 |
0.331 |
|
| 2008 |
Tomazou EM, Rakyan VK, Lefebvre G, Andrews R, Ellis P, Jackson DK, Langford C, Francis MD, Bäckdahl L, Miretti M, Coggill P, Ottaviani D, Sheer D, Murrell A, Beck S. Generation of a genomic tiling array of the human major histocompatibility complex (MHC) and its application for DNA methylation analysis. Bmc Medical Genomics. 1: 19. PMID 18513384 DOI: 10.1186/1755-8794-1-19 |
0.443 |
|
| 2008 |
Beck S, Rakyan VK. The methylome: approaches for global DNA methylation profiling. Trends in Genetics. 24: 231-237. PMID 18325624 DOI: 10.1016/J.Tig.2008.01.006 |
0.42 |
|
| 2008 |
Horton R, Gibson R, Coggill P, Miretti M, Allcock RJ, Almeida J, Forbes S, Gilbert JG, Halls K, Harrow JL, Hart E, Howe K, Jackson DK, Palmer S, Roberts AN, ... ... Beck S, et al. Variation analysis and gene annotation of eight MHC haplotypes: the MHC Haplotype Project. Immunogenetics. 60: 1-18. PMID 18193213 DOI: 10.1007/S00251-007-0262-2 |
0.311 |
|
| 2008 |
Turner DJ, Miretti M, Rajan D, Fiegler H, Carter NP, Blayney ML, Beck S, Hurles ME. Germline rates of de novo meiotic deletions and duplications causing several genomic disorders Nature Genetics. 40: 90-95. PMID 18059269 DOI: 10.1038/Ng.2007.40 |
0.348 |
|
| 2007 |
Takousis P, Johonnett P, Williamson J, Sasieni P, Warnes G, Forshew T, Azuara V, Fisher A, Wu PJ, Jones T, Vatcheva R, Beck S, Sheer D. Replication timing profile reflects the distinct functional and genomic features of the MHC class II region. Cell Cycle (Georgetown, Tex.). 6: 2393-8. PMID 17938583 DOI: 10.4161/Cc.6.19.4762 |
0.366 |
|
| 2007 |
Raval A, Tanner SM, Byrd JC, Angerman EB, Perko JD, Chen SS, Hackanson B, Grever MR, Lucas DM, Matkovic JJ, Lin TS, Kipps TJ, Murray F, Weisenburger D, Sanger W, ... ... Beck S, et al. Downregulation of death-associated protein kinase 1 (DAPK1) in chronic lymphocytic leukemia. Cell. 129: 879-90. PMID 17540169 DOI: 10.1016/J.Cell.2007.03.043 |
0.325 |
|
| 2007 |
Shaw I, Powell TJ, Marston DA, Baker K, van Hateren A, Riegert P, Wiles MV, Milne S, Beck S, Kaufman J. Different evolutionary histories of the two classical class I genes BF1 and BF2 illustrate drift and selection within the stable MHC haplotypes of chickens. Journal of Immunology (Baltimore, Md. : 1950). 178: 5744-52. PMID 17442958 DOI: 10.4049/Jimmunol.178.9.5744 |
0.326 |
|
| 2007 |
Yeo TW, De Jager PL, Gregory SG, Barcellos LF, Walton A, Goris A, Fenoglio C, Ban M, Taylor CJ, Goodman RS, Walsh E, Wolfish CS, Horton R, Traherne J, Beck S, et al. A second major histocompatibility complex susceptibility locus for multiple sclerosis. Annals of Neurology. 61: 228-36. PMID 17252545 DOI: 10.1002/Ana.21063 |
0.34 |
|
| 2007 |
Bignone PA, Lee KY, Liu Y, Emilion G, Finch J, Soosay AER, Charnock FML, Beck S, Dunham I, Mungall AJ, Ganesan TS. RPS6KA2, a putative tumour suppressor gene at 6q27 in sporadic epithelial ovarian cancer Oncogene. 26: 683-700. PMID 16878154 DOI: 10.1038/Sj.Onc.1209827 |
0.31 |
|
| 2006 |
Horton R, Coggill P, Miretti MM, Sambrook JG, Traherne JA, Ward R, Sims S, Palmer S, Sehra H, Harrow J, Rogers J, Carrington M, Trowsdale J, Beck S. The LRC haplotype project: a resource for killer immunoglobulin-like receptor-linked association studies. Tissue Antigens. 68: 450-2. PMID 17092261 DOI: 10.1111/J.1399-0039.2006.00697.X |
0.338 |
|
| 2006 |
Deakin JE, Papenfuss AT, Belov K, Cross JG, Coggill P, Palmer S, Sims S, Speed TP, Beck S, Graves JA. Evolution and comparative analysis of the MHC Class III inflammatory region. Bmc Genomics. 7: 281. PMID 17081307 DOI: 10.1186/1471-2164-7-281 |
0.314 |
|
| 2006 |
Eckhardt F, Lewin J, Cortese R, Rakyan VK, Attwood J, Burger M, Burton J, Cox TV, Davies R, Down TA, Haefliger C, Horton R, Howe K, Jackson DK, Kunde J, ... ... Beck S, et al. DNA methylation profiling of human chromosomes 6, 20 and 22. Nature Genetics. 38: 1378-85. PMID 17072317 DOI: 10.1038/Ng1909 |
0.412 |
|
| 2006 |
Rakyan VK, Beck S. Epigenetic variation and inheritance in mammals Current Opinion in Genetics & Development. 16: 573-577. PMID 17005390 DOI: 10.1016/J.Gde.2006.09.002 |
0.367 |
|
| 2006 |
de Bakker PI, McVean G, Sabeti PC, Miretti MM, Green T, Marchini J, Ke X, Monsuur AJ, Whittaker P, Delgado M, Morrison J, Richardson A, Walsh EC, Gao X, Galver L, ... ... Beck S, et al. A high-resolution HLA and SNP haplotype map for disease association studies in the extended human MHC. Nature Genetics. 38: 1166-72. PMID 16998491 DOI: 10.1038/Ng1885 |
0.346 |
|
| 2006 |
Sambrook JG, Bashirova A, Andersen H, Piatak M, Vernikos GS, Coggill P, Lifson JD, Carrington M, Beck S. Identification of the ancestral killer immunoglobulin-like receptor gene in primates. Bmc Genomics. 7: 209. PMID 16911775 DOI: 10.1186/1471-2164-7-209 |
0.328 |
|
| 2006 |
Sambrook JG, Sehra H, Coggill P, Humphray S, Palmer S, Sims S, Takamatsu HH, Wileman T, Archibald AL, Beck S. Identification of a single killer immunoglobulin-like receptor (KIR) gene in the porcine leukocyte receptor complex on chromosome 6q. Immunogenetics. 58: 481-6. PMID 16738944 DOI: 10.1007/S00251-006-0110-9 |
0.331 |
|
| 2006 |
Lieb JD, Beck S, Bulyk ML, Farnham P, Hattori N, Henikoff S, Liu XS, Okumura K, Shiota K, Ushijima T, Greally JM. Applying whole-genome studies of epigenetic regulation to study human disease. Cytogenetic and Genome Research. 114: 1-15. PMID 16717444 DOI: 10.1159/000091922 |
0.405 |
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| 2006 |
Gregory SG, Barlow KF, McLay KE, Kaul R, Swarbreck D, Dunham A, Scott CE, Howe KL, Woodfine K, Spencer CC, Jones MC, Gillson C, Searle S, Zhou Y, Kokocinski F, ... ... Beck S, et al. The DNA sequence and biological annotation of human chromosome 1. Nature. 441: 315-21. PMID 16710414 DOI: 10.1038/Nature04727 |
0.383 |
|
| 2006 |
Renard C, Hart E, Sehra H, Beasley H, Coggill P, Howe K, Harrow J, Gilbert J, Sims S, Rogers J, Ando A, Shigenari A, Shiina T, Inoko H, Chardon P, ... Beck S, et al. The genomic sequence and analysis of the swine major histocompatibility complex Genomics. 88: 96-110. PMID 16515853 DOI: 10.1016/J.Ygeno.2006.01.004 |
0.38 |
|
| 2006 |
Miretti MM, Beck S. Immunogenomics: molecular hide and seek. Human Genomics. 2: 244-251. PMID 16460649 DOI: 10.1186/1479-7364-2-4-244 |
0.365 |
|
| 2006 |
Traherne JA, Horton R, Roberts AN, Miretti MM, Hurles ME, Stewart CA, Ashurst JL, Atrazhev AM, Coggill P, Palmer S, Almeida J, Sims S, Wilming LG, Rogers J, de Jong PJ, ... ... Beck S, et al. Genetic analysis of completely sequenced disease-associated MHC haplotypes identifies shuffling of segments in recent human history. Plos Genetics. 2: e9. PMID 16440057 DOI: 10.1371/Journal.Pgen.0020009 |
0.4 |
|
| 2005 |
Laun K, Coggill P, Palmer S, Sims S, Ning Z, Ragoussis J, Volpi E, Wilson N, Beck S, Ziegler A, Volz A. The Leukocyte Receptor Complex in Chicken Is Characterized by Massive Expansion and Diversification of Immunoglobulin-Like Loci Plos Genetics. 2. PMID 16699593 DOI: 10.1371/Journal.Pgen.0020073 |
0.318 |
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| 2005 |
Sambrook JG, Figueroa F, Beck S. A genome-wide survey of Major Histocompatibility Complex (MHC) genes and their paralogues in zebrafish. Bmc Genomics. 6: 152. PMID 16271140 DOI: 10.1186/1471-2164-6-152 |
0.365 |
|
| 2005 |
Cross JG, Harrison GA, Coggill P, Sims S, Beck S, Deakin JE, Graves JA. Analysis of the genomic region containing the tammar wallaby (Macropus eugenii) orthologues of MHC class III genes. Cytogenetic and Genome Research. 111: 110-7. PMID 16103651 DOI: 10.1159/000086379 |
0.392 |
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| 2005 |
Walker BA, Van Hateren A, Milne S, Beck S, Kaufman J. Chicken TAP genes differ from their human orthologues in locus organisation, size, sequence features and polymorphism Immunogenetics. 57: 232-247. PMID 15900495 DOI: 10.1007/S00251-005-0786-2 |
0.349 |
|
| 2005 |
Murrell A, Rakyan VK, Beck S. From genome to epigenome Human Molecular Genetics. 14. PMID 15809270 DOI: 10.1093/Hmg/Ddi110 |
0.389 |
|
| 2005 |
Miretti MM, Walsh EC, Ke X, Delgado M, Griffiths M, Hunt S, Morrison J, Whittaker P, Lander ES, Cardon LR, Bentley DR, Rioux JD, Beck S, Deloukas P. A high-resolution linkage-disequilibrium map of the human major histocompatibility complex and first generation of tag single-nucleotide polymorphisms. American Journal of Human Genetics. 76: 634-46. PMID 15747258 DOI: 10.1086/429393 |
0.36 |
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| 2005 |
Sambrook JG, Bashirova A, Palmer S, Sims S, Trowsdale J, Abi-Rached L, Parham P, Carrington M, Beck S. Single haplotype analysis demonstrates rapid evolution of the killer immunoglobulin-like receptor (KIR) loci in primates. Genome Research. 15: 25-35. PMID 15632087 DOI: 10.1101/Gr.2381205 |
0.389 |
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| 2004 |
Horton R, Wilming L, Rand V, Lovering RC, Bruford EA, Khodiyar VK, Lush MJ, Povey S, Talbot CC, Wright MW, Wain HM, Trowsdale J, Ziegler A, Beck S. Gene map of the extended human MHC. Nature Reviews. Genetics. 5: 889-99. PMID 15573121 DOI: 10.1038/Nrg1489 |
0.386 |
|
| 2004 |
Rakyan VK, Hildmann T, Novik KL, Lewin J, Tost J, Cox AV, Andrews TD, Howe KL, Otto T, Olek A, Fischer J, Gut IG, Berlin K, Beck S. DNA methylation profiling of the human major histocompatibility complex: a pilot study for the human epigenome project. Plos Biology. 2: e405. PMID 15550986 DOI: 10.1371/Journal.Pbio.0020405 |
0.447 |
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| 2004 |
Eckhardt F, Beck S, Gut IG, Berlin K. Future potential of the Human Epigenome Project Expert Review of Molecular Diagnostics. 4: 609-618. PMID 15347255 DOI: 10.1586/14737159.4.5.609 |
0.453 |
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| 2004 |
Humphray SJ, Oliver K, Hunt AR, Plumb RW, Loveland JE, Howe KL, Andrews TD, Searle S, Hunt SE, Scott CE, Jones MC, Ainscough R, Almeida JP, Ambrose KD, Ashwell RI, ... ... Beck S, et al. DNA sequence and analysis of human chromosome 9. Nature. 429: 369-74. PMID 15164053 DOI: 10.1038/Nature02465 |
0.391 |
|
| 2004 |
Shiina T, Shimizu S, Hosomichi K, Kohara S, Watanabe S, Hanzawa K, Beck S, Kulski JK, Inoko H. Comparative Genomic Analysis of Two Avian (Quail and Chicken) MHC Regions Journal of Immunology. 172: 6751-6763. PMID 15153492 DOI: 10.4049/Jimmunol.172.11.6751 |
0.364 |
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| 2004 |
Stewart CA, Horton R, Allcock RJ, Ashurst JL, Atrazhev AM, Coggill P, Dunham I, Forbes S, Halls K, Howson JM, Humphray SJ, Hunt S, Mungall AJ, Osoegawa K, Palmer S, ... ... Beck S, et al. Complete MHC haplotype sequencing for common disease gene mapping. Genome Research. 14: 1176-87. PMID 15140828 DOI: 10.1101/Gr.2188104 |
0.382 |
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| 2003 |
Amadou C, Younger RM, Sims S, Matthews LH, Rogers J, Kumanovics A, Ziegler A, Beck S, Lindahl KF. Co-duplication of olfactory receptor and MHC class I genes in the mouse major histocompatibility complex. Human Molecular Genetics. 12: 3025-40. PMID 14506126 DOI: 10.1093/Hmg/Ddg317 |
0.376 |
|
| 2003 |
Beck S. The Human Genome Project: what we have learnt about the MHC region on chromosome 6 and its potential to Behçet's disease Advances in Experimental Medicine and Biology. 528: 207-211. PMID 12918691 DOI: 10.1007/0-306-48382-3_40 |
0.33 |
|
| 2003 |
Allcock RJ, Barrow AD, Forbes S, Beck S, Trowsdale J. The human TREM gene cluster at 6p21.1 encodes both activating and inhibitory single IgV domain receptors and includes NKp44. European Journal of Immunology. 33: 567-77. PMID 12645956 DOI: 10.1002/Immu.200310033 |
0.303 |
|
| 2003 |
Volz A, Ehlers A, Younger R, Forbes S, Trowsdale J, Schnorr D, Beck S, Ziegler A. Complex transcription and splicing of odorant receptor genes. Journal of Biological Chemistry. 278: 19691-19701. PMID 12637542 DOI: 10.1074/Jbc.M212424200 |
0.349 |
|
| 2003 |
Donev R, Horton R, Beck S, Doneva T, Vatcheva R, Bowen WR, Sheer D. Recruitment of heterogeneous nuclear ribonucleoprotein A1 in vivo to the LMP/TAP region of the major histocompatibility complex. The Journal of Biological Chemistry. 278: 5214-26. PMID 12435746 DOI: 10.1074/Jbc.M206621200 |
0.314 |
|
| 2003 |
Horton R, Beck S. Accessing HLA sequencing data through the 6ace database. Methods of Molecular Biology. 210: 23-42. PMID 12412449 DOI: 10.1385/1-59259-291-0:23 |
0.33 |
|
| 2003 |
Beck S. Immunogenomics: towards a digital immune system. Novartis Foundation Symposium. 254: 223-233. DOI: 10.1002/0470090766.Ch15 |
0.357 |
|
| 2002 |
Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, Agarwal P, Agarwala R, Ainscough R, Alexandersson M, An P, Antonarakis SE, Attwood J, Baertsch R, Bailey J, ... ... Beck S, et al. Initial sequencing and comparative analysis of the mouse genome. Nature. 420: 520-62. PMID 12466850 DOI: 10.1038/Nature01262 |
0.377 |
|
| 2002 |
Liu Y, Dodds P, Emilion G, Mungall AJ, Dunham I, Beck S, Wells RS, Charnock FM, Ganesan TS. The human homologue of unc-93 maps to chromosome 6q27 - characterisation and analysis in sporadic epithelial ovarian cancer. Bmc Genetics. 3: 20. PMID 12381271 DOI: 10.1186/1471-2156-3-20 |
0.341 |
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| 2002 |
Radosavljevic M, Cuillerier B, Wilson MJ, Clément O, Wicker S, Gilfillan S, Beck S, Trowsdale J, Bahram S. A cluster of ten novel MHC class I related genes on human chromosome 6q24.2-q25.3. Genomics. 79: 114-23. PMID 11827464 DOI: 10.1006/Geno.2001.6673 |
0.332 |
|
| 2002 |
Liu Y, Emilion G, Mungall AJ, Dunham I, Beck S, Meuth-Metzinger VGL, Shelling AN, Charnock FML, Ganesan TS. Physical and transcript map of the region between D6S264 and D6S149 on chromosome 6q27, the minimal region of allele loss in sporadic epithelial ovarian cancer. Oncogene. 21: 387-399. PMID 11821951 DOI: 10.1038/Sj.Onc.1205067 |
0.343 |
|
| 2001 |
Deloukas P, Matthews LH, Ashurst J, Burton J, Gilbert JG, Jones M, Stavrides G, Almeida JP, Babbage AK, Bagguley CL, Bailey J, Barlow KF, Bates KN, Beard LM, Beare DM, ... ... Beck S, et al. The DNA sequence and comparative analysis of human chromosome 20. Nature. 414: 865-71. PMID 11780052 DOI: 10.1038/414865A |
0.378 |
|
| 2001 |
Beck S. Genome acrobatics: understanding complex genomes. Drug Discovery Today. 6: 1181-1182. PMID 11722860 DOI: 10.1016/S1359-6446(01)02036-0 |
0.322 |
|
| 2001 |
Asakawa S, Tsunematsu Ki, Takayanagi A, Sasaki T, Shimizu A, Shintani A, Kawasaki K, Mungall AJ, Beck S, Minoshima S, Shimizu N. The genomic structure and promoter region of the human parkin gene. Biochemical and Biophysical Research Communications. 286: 863-8. PMID 11527378 DOI: 10.1006/Bbrc.2001.5490 |
0.384 |
|
| 2001 |
Trowsdale J, Barten R, Haude A, Stewart CA, Beck S, Wilson MJ. The genomic context of natural killer receptor extended gene families. Immunological Reviews. 181: 20-38. PMID 11513141 DOI: 10.1034/J.1600-065X.2001.1810102.X |
0.361 |
|
| 2001 |
Younger RM, Amadou C, Bethel G, Ehlers A, Lindahl KF, Forbes S, Horton R, Milne S, Mungall AJ, Trowsdale J, Volz A, Ziegler A, Beck S. Characterization of Clustered MHC-Linked Olfactory Receptor Genes in Human and Mouse Genome Research. 11: 519-530. PMID 11282967 DOI: 10.1101/Gr.Gr-1603R |
0.312 |
|
| 2001 |
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, FitzHugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, ... ... Beck S, et al. Initial sequencing and analysis of the human genome. Nature. 409: 860-921. PMID 11237011 DOI: 10.1038/35057062 |
0.361 |
|
| 2001 |
Rhodes DA, Stammers M, Malcherek G, Beck S, Trowsdale J. The cluster of BTN genes in the extended major histocompatibility complex. Genomics. 71: 351-62. PMID 11170752 DOI: 10.1006/Geno.2000.6406 |
0.338 |
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| 2001 |
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, Fitzhugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, ... ... Beck S, et al. Erratum: Initial sequencing and analysis of the human genome: International Human Genome Sequencing Consortium (Nature (2001) 409 (860-921)) Nature. 412: 565-566. DOI: 10.1038/35087627 |
0.354 |
|
| 2000 |
Beck S, Trowsdale J. THE HUMAN MAJOR HISTOCOMPATIBILITY COMPLEX: Lessons from the DNA Sequence Annual Review of Genomics and Human Genetics. 1: 117-137. PMID 11701627 DOI: 10.1146/Annurev.Genom.1.1.117 |
0.386 |
|
| 2000 |
Torkar M, Haude A, Milne S, Beck S, Trowsdale J, Wilson MJ. Arrangement of the ILT gene cluster: a common null allele of the ILT6 gene results from a 6.7-kbp deletion. European Journal of Immunology. 30: 3655-3662. PMID 11169408 DOI: 10.1002/1521-4141(200012)30:12<3655::Aid-Immu3655>3.0.Co;2-Y |
0.371 |
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| 2000 |
Ziegler A, Ehlers A, Forbes S, Trowsdale J, Volz A, Younger R, Beck S. Polymorphisms in olfactory receptor genes: a cautionary note. Human Immunology. 61: 1281-1284. PMID 11163084 DOI: 10.1016/S0198-8859(00)00219-6 |
0.351 |
|
| 2000 |
Stammers M, Rowen L, Rhodes D, Trowsdale J, Beck S. BTL-II: a polymorphic locus with homology to the butyrophilin gene family, located at the border of the major histocompatibility complex class II and class III regions in human and mouse. Immunogenetics. 51: 373-382. PMID 10803852 DOI: 10.1007/S002510050633 |
0.337 |
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| 2000 |
Wilson MJ, Torkar M, Haude A, Milne S, Jones T, Sheer D, Beck S, Trowsdale J. Plasticity in the organization and sequences of human KIR/ILT gene families. Proceedings of the National Academy of Sciences of the United States of America. 97: 4778-83. PMID 10781084 DOI: 10.1073/Pnas.080588597 |
0.356 |
|
| 2000 |
Tripodis N, Palmer S, Phillips S, Milne S, Beck S, Ragoussis J. Construction of a High-Resolution 2.5-Mb Transcript Map of the Human 6p21.2–6p21.3 Region Immediately Centromeric of the Major Histocompatibility Complex Genome Research. 10: 454-472. PMID 10779486 DOI: 10.1101/Gr.10.4.454 |
0.334 |
|
| 1999 |
Kaufman J, Milne S, Göbel TWF, Walker BA, Jacob JP, Auffray C, Zoorob R, Beck S. The chicken B locus is a minimal essential major histocompatibility complex Nature. 401: 923-925. PMID 10553909 DOI: 10.1038/44856 |
0.355 |
|
| 1999 |
Beck S, Geraghty D, Inoko H, Rowen L, Aguado B, Bahram S, Campbell R, Forbes S, Guillaudeux T, Hood L, Horton R, Janer M, Jasoni C, Madan A, Milne S, et al. Complete sequence and gene map of a human major histocompatibility complex Nature. 401: 921-923. PMID 10553908 DOI: 10.1038/44853 |
0.385 |
|
| 1999 |
Stephens R, Horton R, Humphray S, Rowen L, Trowsdale J, Beck S. Gene organisation, sequence variation and isochore structure at the centromeric boundary of the human MHC Journal of Molecular Biology. 291: 789-799. PMID 10452889 DOI: 10.1006/Jmbi.1999.3004 |
0.37 |
|
| 1999 |
Janitz K, Wild A, Beck S, Savasta S, Beluffi G, Ziegler A, Volz A. Genomic organization of the HSET locus and the possible association of HLA-linked genes with immotile cilia syndrome (ICS) Immunogenetics. 49: 644-652. PMID 10369922 DOI: 10.1007/S002510050660 |
0.339 |
|
| 1999 |
Beck S, Trowsdale J. Sequence organisation of the class II region of the human MHC Immunological Reviews. 167: 201-210. PMID 10319262 DOI: 10.1111/J.1600-065X.1999.Tb01393.X |
0.361 |
|
| 1999 |
Kaufman J, Jacob J, Shaw J, Walker B, Milne S, Beck S, Salomonsen J. Gene organisation determines evolution of function in the chicken MHC. Immunological Reviews. 167: 101-117. PMID 10319254 DOI: 10.1111/J.1600-065X.1999.Tb01385.X |
0.315 |
|
| 1999 |
Thorpe KL, Schafer AJ, Génin E, Trowsdale J, Beck S. Detection of polymorphism in the RING3 gene by high-throughput fluorescent SSCP analysis. Immunogenetics. 49: 256-65. PMID 10079288 DOI: 10.1007/S002510050491 |
0.318 |
|
| 1998 |
Horton R, Niblett D, Milne S, Palmer S, Tubby B, Trowsdale J, Beck S. Large-scale sequence comparisons reveal unusually high levels of variation in the HLA-DQB1 locus in the class II region of the human MHC Journal of Molecular Biology. 282: 71-97. PMID 9733642 DOI: 10.1006/Jmbi.1998.2018 |
0.387 |
|
| 1998 |
Thorpe KL, Beck S. DNA sequence and structure of the mouse RING3 gene: Identification of variant RING3 transcripts Immunogenetics. 48: 82-86. PMID 9601950 DOI: 10.1007/S002510050406 |
0.347 |
|
| 1998 |
Herberg JA, Phillips S, Beck S, Jones T, Sheer D, Wu JJ, Prochazka V, Barr PJ, Kiefer MC, Trowsdale J. Genomic structure and domain organisation of the human Bak gene. Gene. 211: 87-94. PMID 9573342 DOI: 10.1016/S0378-1119(98)00101-2 |
0.334 |
|
| 1998 |
Herberg JA, Beck S, Trowsdale J. TAPASIN, DAXX, RGL2, HKE2 and four new genes (BING 1, 3 to 5) form a dense cluster at the centromeric end of the MHC. Journal of Molecular Biology. 277: 839-57. PMID 9545376 DOI: 10.1006/Jmbi.1998.1637 |
0.369 |
|
| 1998 |
Herberg JA, Sgouros J, Jones T, Copeman J, Humphray SJ, Sheer D, Cresswell P, Beck S, Trowsdale J. Genomic analysis of the Tapasin gene, located close to the TAP loci in the MHC. European Journal of Immunology. 28: 459-67. PMID 9521053 DOI: 10.1002/(Sici)1521-4141(199802)28:02<459::Aid-Immu459>3.0.Co;2-Z |
0.35 |
|
| 1998 |
Beck S, Sterk P. Genome-scale DNA sequencing: where are we? Current Opinion in Biotechnology. 9: 116-121. PMID 9503597 DOI: 10.1016/S0958-1669(98)80094-3 |
0.355 |
|
| 1997 |
Avis T, Clark EK, Flack TL, Mohammadi M, Milne S, Niblett D, Palmer S, Phillips S, Smalley C, Tagney M, Thorpe KL, Tubby B, Westhorp J, Beck S. The chromosome 6 sequencing project at the Sanger Centre Mitochondrial Dna. 8: 131-135. PMID 10668956 DOI: 10.3109/10425179709034062 |
0.311 |
|
| 1997 |
Thorpe KL, Gorman P, Thomas C, Sheer D, Trowsdale J, Beck S. Chromosomal localization, gene structure and transcription pattern of the ORFX gene, a homologue of the MHC-linked RING3 gene. Gene. 200: 177-83. PMID 9373153 DOI: 10.1016/S0378-1119(97)00415-0 |
0.321 |
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| 1996 |
Abdulla S, Alderton RP, Glynne RJ, Gut IG, Hosking LK, Jackson A, Kelly A, Newell WR, Radley E, Sanseau P, Thorpe KL, Trowsdale J, Beck S. DNA sequencing of the MHC class II region and the chromosome 6 sequencing effort at the Sanger Centre. Dna Sequence : the Journal of Dna Sequencing and Mapping. 7: 5-7. PMID 9063628 DOI: 10.3109/10425179609015637 |
0.373 |
|
| 1996 |
Newell WR, Trowsdale J, Beck S. MHCDB: database of the human MHC (release 2). Immunogenetics. 45: 6-8. PMID 8881031 DOI: 10.1007/S002510050160 |
0.36 |
|
| 1996 |
Abdulla S, Beck S, Belich M, Jackson A, Nakamura T, Trowsdale J. Divergent intron arrangement in the MB1/LMP7 proteasome gene pair Immunogenetics. 44: 254-258. PMID 8753855 DOI: 10.1007/Bf02602554 |
0.344 |
|
| 1996 |
Beck S, Abdulla S, Alderton RP, Glynne RJ, Gut IG, Hosking LK, Jackson A, Kelly A, Newell WR, Sanseau P, Radley E, Thorpe KL, Trowsdale J. Evolutionary dynamics of non-coding sequences within the class II region of the human MHC. Journal of Molecular Biology. 255: 1-13. PMID 8568858 DOI: 10.1006/Jmbi.1996.0001 |
0.364 |
|
| 1995 |
Brown NP, Whittaker AJ, Newell WR, Rawlings CJ, Beck S. Identification and analysis of multigene families by comparison of exon fingerprints Journal of Molecular Biology. 249: 342-359. PMID 7783198 DOI: 10.1006/Jmbi.1995.0301 |
0.332 |
|
| 1995 |
Baxendale S, Abdulla S, Elgar G, Buck D, Berks M, Micklem G, Durbin R, Bates G, Brenner S, Beck S. Comparative sequence analysis of the human and pufferfish Huntington's disease genes. Nature Genetics. 10: 67-76. PMID 7647794 DOI: 10.1038/Ng0595-67 |
0.4 |
|
| 1994 |
Newell WR, Trowsdale J, Beck S. MHCDB--database of the human MHC. Immunogenetics. 40: 109-15. PMID 8026859 DOI: 10.1007/Bf00188173 |
0.407 |
|
| 1994 |
Sanséau P, Jackson A, Alderton RP, Beck S, Senger G, Sheer D, Kelly A, Trowsdale J. Cloning and characterization of human phosphatase inhibitor-2 (IPP-2) sequences. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 5: 490-6. PMID 7949733 DOI: 10.1007/Bf00369318 |
0.351 |
|
| 1993 |
Glynne R, Kerr LA, Mockridge I, Beck S, Kelly A, Trowsdale J. The major histocompatibility complex-encoded proteasome component LMP7: Alternative first exons and post-translational processing European Journal of Immunology. 23: 860-866. PMID 8458375 DOI: 10.1002/Eji.1830230414 |
0.306 |
|
| 1993 |
Beck S. DNA sequencing by chemiluminescent detection Methods in Molecular Biology (Clifton, N.J.). 23: 235-242. PMID 8220756 DOI: 10.1385/0-89603-248-5:235 |
0.32 |
|
| 1993 |
Beck S. Multiplex DNA sequencing Methods in Molecular Biology (Clifton, N.J.). 23: 225-234. PMID 8220754 DOI: 10.1385/0-89603-248-5:225 |
0.326 |
|
| 1993 |
Beck S, Alderton RP. A strategy for the amplification, purification, and selection of M13 templates for large-scale DNA sequencing Analytical Biochemistry. 212: 498-505. PMID 8214592 DOI: 10.1006/Abio.1993.1359 |
0.335 |
|
| 1993 |
Beck S. Accuracy of DNA sequencing: Should the sequence quality be monitored? Mitochondrial Dna. 4: 215-217. PMID 8161825 DOI: 10.3109/10425179309015635 |
0.309 |
|
| 1992 |
Powis SH, Mockridge I, Kelly A, Kerr LA, Glynne R, Gileadi U, Beck S, Trowsdale J. Polymorphism in a second ABC transporter gene located within the class II region of the human major histocompatibility complex Proceedings of the National Academy of Sciences of the United States of America. 89: 1463-1467. PMID 1741401 DOI: 10.1073/Pnas.89.4.1463 |
0.335 |
|
| 1992 |
Beck S, Kelly A, Radley E, Khurshid F, Alderton RP, Trowsdale J. DNA sequence analysis of 66 kb of the human MHC class II region encoding a cluster of genes for antigen processing Journal of Molecular Biology. 228: 433-441. PMID 1453454 DOI: 10.1016/0022-2836(92)90832-5 |
0.396 |
|
| 1992 |
Beck S, Hanson I, Kelly A, Pappin DJC, Trowsdale J. A homologue of the Drosophila female sterile homeotic (fsh) gene in the class II region of the human MHC. Dna Sequence. 2: 203-210. PMID 1352711 DOI: 10.3109/10425179209020804 |
0.375 |
|
| 1992 |
Haynes SR, Dollard C, Winston F, Beck S, Trowsdale J, Dawid IB. The bromodomain: a conserved sequence found in human, Drosophila and yeast proteins. Nucleic Acids Research. 20: 2603. PMID 1350857 DOI: 10.1093/Nar/20.10.2603 |
0.344 |
|
| 1991 |
Kelly A, Powis SH, Glynne R, Radley E, Beck S, Trowsdale J. Second proteasome-related gene in the human MHC class II region. Nature. 353: 667-668. PMID 1922385 DOI: 10.1038/353667A0 |
0.32 |
|
| 1991 |
Glynne R, Powis SH, Beck S, Kelly A, Kerr LA, Trowsdale J. A proteasome-related gene between the two ABC transporter loci in the class II region of the human MHC Nature. 353: 357-360. PMID 1922342 DOI: 10.1038/353357A0 |
0.315 |
|
| 1991 |
Heller C, Radley E, Khurshid FA, Beck S. M13plex vectors for multiplex DNA sequencing. Gene. 103: 131-2. PMID 1879694 DOI: 10.1016/0378-1119(91)90404-Y |
0.317 |
|
| 1991 |
Bankier AT, Beck S, Bohni R, Brown CM, Cerny R, Chee MS, Hutchison CA, Kouzarides T, Martignetti JA, Preddie E, Satchwell SC, Tomlinson P, Weston KM, Barrell BG. The DNA sequence of the human cytomegalovirus genome Dna Sequence : the Journal of Dna Sequencing and Mapping. 2: 1-12. PMID 1666311 DOI: 10.3109/10425179109008433 |
0.401 |
|
| 1990 |
Chee MS, Bankier AT, Beck S, Bohni R, Brown CM, Cerny R, Horsnell T, Hutchison CA, Kouzarides T, Martignetti JA, Preddie E, Satchwell SC, Tomlinson P, Weston KM, Barrell BG. Analysis of the protein-coding content of the sequence of human cytomegalovirus strain AD169 Current Topics in Microbiology and Immunology. 154: 125-169. PMID 2161319 DOI: 10.1007/978-3-642-74980-3_6 |
0.322 |
|
| 1989 |
Beck S, O'Keeffe T, Coull JM, Koster H. Chemiluminescent detection of DNA: Application for DNA sequencing and hybridization Nucleic Acids Research. 17: 5115-5124. PMID 2762122 DOI: 10.1093/Nar/17.13.5115 |
0.309 |
|
| 1987 |
Pohl FM, Beck S. Direct transfer electrophoresis used for DNA sequencing Methods in Enzymology. 155: 250-259. PMID 2828869 DOI: 10.1016/0076-6879(87)55020-0 |
0.338 |
|
| 1984 |
Beck S, Pohl FM. DNA sequencing with direct blotting electrophoresis. The Embo Journal. 3: 2905-2909. DOI: 10.1002/J.1460-2075.1984.Tb02230.X |
0.33 |
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