| Year |
Citation |
Score |
| 2023 |
Zheng F, Liu Y, Yang Y, Wen Y, Li M. Assessing Computational Tools for Predicting Protein Stability Changes upon Missense Mutations Using a New Dataset. Protein Science : a Publication of the Protein Society. e4861. PMID 38084013 DOI: 10.1002/pro.4861 |
0.419 |
|
| 2022 |
Wang C, Xu J, Kocher TD, Li M, Wang D. CRISPR knockouts of pmela and pmelb engineered a golden tilapia by regulating relative pigment cell abundance. The Journal of Heredity. PMID 35385582 DOI: 10.1093/jhered/esac018 |
0.309 |
|
| 2021 |
Sun T, Chen Y, Wen Y, Zhu Z, Li M. PremPLI: a machine learning model for predicting the effects of missense mutations on protein-ligand interactions. Communications Biology. 4: 1311. PMID 34799678 DOI: 10.1038/s42003-021-02826-3 |
0.423 |
|
| 2020 |
Chen Y, Lu H, Zhang N, Zhu Z, Wang S, Li M. PremPS: Predicting the impact of missense mutations on protein stability. Plos Computational Biology. 16: e1008543. PMID 33378330 DOI: 10.1371/journal.pcbi.1008543 |
0.448 |
|
| 2020 |
Zhang N, Lu H, Chen Y, Zhu Z, Yang Q, Wang S, Li M. PremPRI: Predicting the Effects of Missense Mutations on Protein-RNA Interactions. International Journal of Molecular Sciences. 21. PMID 32756481 DOI: 10.3390/Ijms21155560 |
0.467 |
|
| 2020 |
Zhang N, Chen Y, Lu H, Zhao F, Alvarez RV, Goncearenco A, Panchenko AR, Li M. MutaBind2: Predicting the Impacts of Single and Multiple Mutations on Protein-Protein Interactions. Iscience. 23: 100939. PMID 32169820 DOI: 10.1016/J.Isci.2020.100939 |
0.782 |
|
| 2019 |
Brown AL, Li M, Goncearenco A, Panchenko AR. Finding driver mutations in cancer: Elucidating the role of background mutational processes. Plos Computational Biology. 15: e1006981. PMID 31034466 DOI: 10.1371/Journal.Pcbi.1006981 |
0.763 |
|
| 2018 |
Zhang N, Chen Y, Zhao F, Yang Q, Simonetti FL, Li M. PremPDI estimates and interprets the effects of missense mutations on protein-DNA interactions. Plos Computational Biology. 14: e1006615. PMID 30533007 DOI: 10.1371/Journal.Pcbi.1006615 |
0.531 |
|
| 2018 |
Zhao F, Zheng L, Goncearenco A, Panchenko AR, Li M. Computational Approaches to Prioritize Cancer Driver Missense Mutations. International Journal of Molecular Sciences. 19. PMID 30037003 DOI: 10.3390/Ijms19072113 |
0.785 |
|
| 2017 |
Goncearenco A, Li M, Simonetti FL, Shoemaker BA, Panchenko AR. Exploring Protein-Protein Interactions as Drug Targets for Anti-cancer Therapy with In Silico Workflows. Methods in Molecular Biology (Clifton, N.J.). 1647: 221-236. PMID 28809006 DOI: 10.1007/978-1-4939-7201-2_15 |
0.743 |
|
| 2017 |
Goncearenco A, Rager SL, Li M, Sang QX, Rogozin IB, Panchenko AR. Exploring background mutational processes to decipher cancer genetic heterogeneity. Nucleic Acids Research. PMID 28472504 DOI: 10.1093/Nar/Gkx367 |
0.763 |
|
| 2017 |
Li M, Goncearenco A, Panchenko AR. Annotating Mutational Effects on Proteins and Protein Interactions: Designing Novel and Revisiting Existing Protocols. Methods in Molecular Biology (Clifton, N.J.). 1550: 235-260. PMID 28188534 DOI: 10.1007/978-1-4939-6747-6_17 |
0.783 |
|
| 2016 |
Li M, Simonetti FL, Goncearenco A, Panchenko AR. MutaBind estimates and interprets the effects of sequence variants on protein-protein interactions. Nucleic Acids Research. 44: W494-501. PMID 27150810 DOI: 10.1093/Nar/Gkw374 |
0.779 |
|
| 2015 |
Li M, Kales SC, Ma K, Shoemaker B, Crespo-Barreto J, Cangelosi A, Lipkowitz S, Panchenko A. Balancing protein stability and activity in cancer: a new approach for identifying driver mutations affecting CBL ubiquitin ligase activation. Cancer Research. PMID 26676746 DOI: 10.1158/0008-5472.Can-14-3812 |
0.716 |
|
| 2015 |
Petukh M, Li M, Alexov E. Predicting Binding Free Energy Change Caused by Point Mutations with Knowledge-Modified MM/PBSA Method. Plos Computational Biology. 11: e1004276. PMID 26146996 DOI: 10.1371/journal.pcbi.1004276 |
0.403 |
|
| 2015 |
Petukh M, Li M, Alexov E. Predicting Binding Free Energy Change Caused by Point Mutations with Knowledge-Modified MM/PBSA Method Plos Computational Biology. 11. DOI: 10.1371/Journal.Pcbi.1004276 |
0.496 |
|
| 2015 |
Petukh M, Morrison J, Li M, Panchenko A, Alexov E. SAMBE: The New Webserver for Predicting the Effect of nssNP on the Protein-Protein Binding Free Energy Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.867 |
0.665 |
|
| 2014 |
Li M, Petukh M, Alexov E, Panchenko AR. Predicting the Impact of Missense Mutations on Protein-Protein Binding Affinity. Journal of Chemical Theory and Computation. 10: 1770-1780. PMID 24803870 DOI: 10.1021/Ct401022C |
0.723 |
|
| 2013 |
Li M, Zheng W. All-atom molecular dynamics simulations of actin-myosin interactions: a comparative study of cardiac α myosin, β myosin, and fast skeletal muscle myosin. Biochemistry. 52: 8393-405. PMID 24224850 DOI: 10.1021/Bi4006896 |
0.301 |
|
| 2013 |
Li M, Shoemaker BA, Thangudu RR, Ferraris JD, Burg MB, Panchenko AR. Mutations in DNA-binding loop of NFAT5 transcription factor produce unique outcomes on protein-DNA binding and dynamics. The Journal of Physical Chemistry. B. 117: 13226-34. PMID 23734591 DOI: 10.1021/Jp403310A |
0.628 |
|
| 2012 |
Li M, Zheng W. All-atom structural investigation of kinesin-microtubule complex constrained by high-quality cryo-electron-microscopy maps. Biochemistry. 51: 5022-32. PMID 22650362 DOI: 10.1021/Bi300362A |
0.331 |
|
| 2011 |
Li M, Zheng W. Probing the structural and energetic basis of kinesin-microtubule binding using computational alanine-scanning mutagenesis. Biochemistry. 50: 8645-55. PMID 21910419 DOI: 10.1021/Bi2008257 |
0.364 |
|
| 2011 |
Li MH, Luo Q, Xue XG, Li ZS. Molecular dynamics studies of the 3D structure and planar ligand binding of a quadruplex dimer. Journal of Molecular Modeling. 17: 515-26. PMID 20508957 DOI: 10.1007/S00894-010-0746-0 |
0.308 |
|
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