Brian W. Matthews, Ph.D., D.Sc. - Related publications

Affiliations: 
Molecular Biology University of Oregon, Eugene, OR, United States 
Area:
X-ray crystallography, protein folding
Website:
http://molbio.uoregon.edu/matthews/
NOTE: We are testing a new system for identifying relevant work based on semantic analysis that identifies similarities between recently published papers and the current author's publications. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches.
20 most relevant papers in past 60 days:
Year Citation  Score
2022 Tsao HE, Lui SN, Lo AH, Chen S, Wong HY, Wong CK, Jiang L, Wong KB. Structural insights into how vacuolar sorting receptors recognize the sorting determinants of seed storage proteins. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 34983843 DOI: 10.1073/pnas.2111281119   
2022 Cao Y, Yang R, Wang W, Jiang S, Yang C, Liu N, Dai H, Lee I, Meng X, Yuan Z. Probing the Formation, Structure and Free Energy Relationships of M Protein Dimers of SARS-CoV-2. Computational and Structural Biotechnology Journal. PMID 35047128 DOI: 10.1016/j.csbj.2022.01.007   
2022 Zhou S, Liu Y, Wang S, Wang L. Effective prediction of short hydrogen bonds in proteins via machine learning method. Scientific Reports. 12: 469. PMID 35013487 DOI: 10.1038/s41598-021-04306-4   
2022 Wang G, Mohanty B, Williams ML, Doak BC, Dhouib R, Totsika M, McMahon R, Sharma G, Zheng D, Bentley MR, Chin YK, Horne J, Chalmers DK, Heras B, Scanlon MJ. Selective binding of small molecules to Vibrio cholerae DsbA offers a starting point for the design of novel antibacterials. Chemmedchem. PMID 34978144 DOI: 10.1002/cmdc.202100673   
2022 Moazzam A, Stanojlovic V, Hinterholzer A, Holzner C, Roschger C, Zierer A, Wiederstein M, Schubert M, Cabrele C. Backbone distortions in lactam-bridged helical peptides. Journal of Peptide Science : An Official Publication of the European Peptide Society. e3400. PMID 34984761 DOI: 10.1002/psc.3400   
2022 Gao WND, Gao C, Deane JE, Carpentier DCJ, Smith GL, Graham SC. The crystal structure of vaccinia virus protein E2 and perspectives on the prediction of novel viral protein folds. The Journal of General Virology. 103. PMID 35020582 DOI: 10.1099/jgv.0.001716   
2022 Orioli S, Henning Hansen CG, Lindorff-Larsen K. Transient exposure of a buried phosphorylation site in an autoinhibited protein. Biophysical Journal. 121: 91-101. PMID 34864046 DOI: 10.1016/j.bpj.2021.11.2890   
2022 Dogra P, Arya S, Singh AK, Datta A, Mukhopadhyay S. Conformational and Solvation Dynamics of an Amyloidogenic Intrinsically Disordered Domain of a Melanosomal Protein. The Journal of Physical Chemistry. B. PMID 34986640 DOI: 10.1021/acs.jpcb.1c09304   
2022 Makshakova O, Zykwinska A, Cuenot S, Colliec-Jouault S, Perez S. Three-dimensional structures, dynamics and calcium-mediated interactions of the exopolysaccharide, Infernan, produced by the deep-sea hydrothermal bacterium Alteromonas infernus. Carbohydrate Polymers. 276: 118732. PMID 34823768 DOI: 10.1016/j.carbpol.2021.118732   
2022 Das B, Nagano K, Kawai G, Murata A, Nakatani K. 2-Amino-1,8-naphthyridine Dimer (ANP77), a High-Affinity Binder to the Internal Loops of C/CC and T/CC Sites in Double-Stranded DNA. The Journal of Organic Chemistry. 87: 340-350. PMID 34937340 DOI: 10.1021/acs.joc.1c02383   
2022 Guzovsky AB, Schafer NP, Wolynes PG, Ferreiro DU. Localization of Energetic Frustration in Proteins. Methods in Molecular Biology (Clifton, N.J.). 2376: 387-398. PMID 34845622 DOI: 10.1007/978-1-0716-1716-8_22   
2022 Hong SH, Nguyen T, Arora P. Design and Synthesis of Crosslinked Helix Dimers as Protein Tertiary Structure Mimics. Current Protocols. 2: e315. PMID 34982512 DOI: 10.1002/cpz1.315   
2022 Drew DL, Ahammad T, Serafin RA, Sahu ID, Khan RH, Faul E, McCarrick RM, Lorigan GA. Probing the local secondary structure of bacteriophage S pinholin membrane protein using electron spin echo envelope modulation spectroscopy. Biochimica Et Biophysica Acta. Biomembranes. 1864: 183836. PMID 34906602 DOI: 10.1016/j.bbamem.2021.183836   
2022 Ma MT, Jennings MR, Blazeck J, Lieberman RL. Catalytically active holo Homo sapiens adenosine deaminase I adopts a closed conformation. Acta Crystallographica. Section D, Structural Biology. 78: 91-103. PMID 34981765 DOI: 10.1107/S2059798321011785   
2022 Zou W, Huang C, Sun Q, Zhao K, Gao H, Su R, Li Y. A stepwise mutagenesis approach using histidine and acidic amino acid to engineer highly pH-dependent protein switches. 3 Biotech. 12: 21. PMID 34956814 DOI: 10.1007/s13205-021-03079-x   
2022 John AM, Sekhon H, Ha JH, Loh SN. Engineering a Fluorescent Protein Color Switch Using Entropy-Driven β-Strand Exchange. Acs Sensors. PMID 35006676 DOI: 10.1021/acssensors.1c02239   
2022 Baxa MC, Sosnick TR. Engineered Metal-Binding Sites to Probe Protein Folding Transition States: Psi Analysis. Methods in Molecular Biology (Clifton, N.J.). 2376: 31-63. PMID 34845602 DOI: 10.1007/978-1-0716-1716-8_2   
2022 Tsai CY, Salawu EO, Li H, Lin GY, Kuo TY, Voon L, Sharma A, Hu KD, Cheng YY, Sahoo S, Stuart L, Chen CW, Chang YY, Lu YL, Ke S, et al. Helical structure motifs made searchable for functional peptide design. Nature Communications. 13: 102. PMID 35013238 DOI: 10.1038/s41467-021-27655-0   
2022 Koley T, Kumar M, Goswami A, Ethayathulla AS, Hariprasad G. Structural modeling of Omicron spike protein and its complex with human ACE-2 receptor: Molecular basis for high transmissibility of the virus. Biochemical and Biophysical Research Communications. 592: 51-53. PMID 35026605 DOI: 10.1016/j.bbrc.2021.12.082   
2022 Davidson J, Nicholas K, Young J, Conrady DG, Mayclin S, Subramanian S, Staker BL, Myler PJ, Asojo OA. Crystal structure of a putative short-chain dehydrogenase/reductase from Paraburkholderia xenovorans. Acta Crystallographica. Section F, Structural Biology Communications. 78: 25-30. PMID 34981772 DOI: 10.1107/S2053230X21012632