Le A. Trinh, Ph.D. - Publications

Affiliations: 
2004 University of California, San Francisco, San Francisco, CA 

33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Shi W, Koo DES, Kitano M, Chiang HJ, Trinh LA, Turcatel G, Steventon B, Arnesano C, Warburton D, Fraser SE, Cutrale F. Pre-processing visualization of hyperspectral fluorescent data with Spectrally Encoded Enhanced Representations. Nature Communications. 11: 726. PMID 32024828 DOI: 10.1038/s41467-020-14486-8  0.96
2020 Simões FC, Cahill TJ, Kenyon A, Gavriouchkina D, Vieira JM, Sun X, Pezzolla D, Ravaud C, Masmanian E, Weinberger M, Mayes S, Lemieux ME, Barnette DN, Gunadasa-Rohling M, Williams RM, ... ... Trinh LA, et al. Macrophages directly contribute collagen to scar formation during zebrafish heart regeneration and mouse heart repair. Nature Communications. 11: 600. PMID 32001677 DOI: 10.1038/s41467-019-14263-2  0.96
2017 Balasanyan V, Watanabe K, Dempsey WP, Lewis TL, Trinh LA, Arnold DB. Structure and Function of an Actin-Based Filter in the Proximal Axon. Cell Reports. 21: 2696-2705. PMID 29212018 DOI: 10.1016/j.celrep.2017.11.046  0.36
2017 Bower DV, Lansdale N, Navarro S, Truong TV, Bower DJ, Featherstone NC, Connell MG, Al-Alam D, Frey MR, Trinh LA, Fernandez GE, Warburton D, Fraser SE, Bennett D, Jesudason EC. SERCA directs cell migration and branching across species and germ layers. Biology Open. PMID 28821490 DOI: 10.1242/bio.026039  0.96
2017 Chen Y, Trinh LA, Fingler J, Fraser SE. 3D in vivo imaging with extended-focus optical coherence microscopy. Journal of Biophotonics. PMID 28417564 DOI: 10.1002/jbio.201700008  0.96
2017 Trinh LA, Chong-Morrison V, Gavriouchkina D, Hochgreb-Hägele T, Senanayake U, Fraser SE, Sauka-Spengler T. Biotagging of Specific Cell Populations in Zebrafish Reveals Gene Regulatory Logic Encoded in the Nuclear Transcriptome. Cell Reports. 19: 425-440. PMID 28402863 DOI: 10.1016/j.celrep.2017.03.045  0.96
2017 Cutrale F, Trivedi V, Trinh LA, Chiu CL, Choi JM, Artiga MS, Fraser SE. Hyperspectral phasor analysis enables multiplexed 5D in vivo imaging. Nature Methods. PMID 28068315 DOI: 10.1038/nmeth.4134  0.96
2016 Chen Y, Trinh LA, Fingler J, Fraser SE. Phase variance optical coherence microscopy for label-free imaging of the developing vasculature in zebrafish embryos. Journal of Biomedical Optics. 21: 126022. PMID 28036094 DOI: 10.1117/1.JBO.21.12.126022  0.96
2016 Cronan MR, Beerman RW, Rosenberg AF, Saelens JW, Johnson MG, Oehlers SH, Sisk DM, Jurcic Smith KL, Medvitz NA, Miller SE, Trinh LA, Fraser SE, Madden JF, Turner J, Stout JE, et al. Macrophage Epithelial Reprogramming Underlies Mycobacterial Granuloma Formation and Promotes Infection. Immunity. 45: 861-876. PMID 27760340 DOI: 10.1016/j.immuni.2016.09.014  0.96
2016 Gross GG, Straub C, Perez-Sanchez J, Dempsey WP, Junge JA, Roberts RW, Trinh LA, Fraser SE, De Koninck Y, De Koninck P, Sabatini BL, Arnold DB. An E3-ligase-based method for ablating inhibitory synapses. Nature Methods. PMID 27271196 DOI: 10.1038/nmeth.3894  0.92
2015 Trinh le A, Fraser SE. Imaging the Cell and Molecular Dynamics of Craniofacial Development: Challenges and New Opportunities in Imaging Developmental Tissue Patterning. Current Topics in Developmental Biology. 115: 599-629. PMID 26589939 DOI: 10.1016/bs.ctdb.2015.09.002  0.96
2015 Ju Shin Y, Kyun Park S, Jung Jung Y, Na Kim Y, Sung Kim K, Kyu Park O, Kwon SH, Ho Jeon S, Trinh le A, Fraser SE, Kee Y, Joon Hwang B. Nanobody-targeted E3-ubiquitin ligase complex degrades nuclear proteins. Scientific Reports. 5: 14269. PMID 26373678 DOI: 10.1038/srep14269  0.96
2015 Trivedi V, Truong TV, Trinh le A, Holland DB, Liebling M, Fraser SE. Dynamic structure and protein expression of the live embryonic heart captured by 2-photon light sheet microscopy and retrospective registration. Biomedical Optics Express. 6: 2056-66. PMID 26114028 DOI: 10.1364/BOE.6.002056  0.96
2015 Ruf-Zamojski F, Trivedi V, Fraser SE, Trinh le A. Spatio-Temporal Differences in Dystrophin Dynamics at mRNA and Protein Levels Revealed by a Novel FlipTrap Line. Plos One. 10: e0128944. PMID 26083378 DOI: 10.1371/journal.pone.0128944  0.92
2013 Trinh le A, Fraser SE. Enhancer and gene traps for molecular imaging and genetic analysis in zebrafish. Development, Growth & Differentiation. 55: 434-45. PMID 23565993 DOI: 10.1111/dgd.12055  0.92
2013 Choe CP, Collazo A, Trinh le A, Pan L, Moens CB, Crump JG. Wnt-dependent epithelial transitions drive pharyngeal pouch formation. Developmental Cell. 24: 296-309. PMID 23375584 DOI: 10.1016/j.devcel.2012.12.003  0.92
2013 Palanca AM, Lee SL, Yee LE, Joe-Wong C, Trinh le A, Hiroyasu E, Husain M, Fraser SE, Pellegrini M, Sagasti A. New transgenic reporters identify somatosensory neuron subtypes in larval zebrafish. Developmental Neurobiology. 73: 152-67. PMID 22865660 DOI: 10.1002/dneu.22049  0.92
2013 Chan K, Trinh LA, Liebling M. A temporal superresolution method applied to low-light cardiac fluorescence microscopy Conference Record - Asilomar Conference On Signals, Systems and Computers. 1073-1077. DOI: 10.1109/ACSSC.2013.6810457  0.92
2011 Trinh le A, Hochgreb T, Graham M, Wu D, Ruf-Zamojski F, Jayasena CS, Saxena A, Hawk R, Gonzalez-Serricchio A, Dixson A, Chow E, Gonzales C, Leung HY, Solomon I, Bronner-Fraser M, et al. A versatile gene trap to visualize and interrogate the function of the vertebrate proteome. Genes & Development. 25: 2306-20. PMID 22056673 DOI: 10.1101/gad.174037.111  0.92
2011 Jayasena CS, Trinh le A, Bronner M. Live imaging of endogenous periodic tryptophan protein 2 gene homologue during zebrafish development. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 240: 2578-83. PMID 21954116 DOI: 10.1002/dvdy.22744  0.92
2011 Jayasena CS, Trinh le A, Bronner M. Live imaging of endogenous Collapsin response mediator protein-1 expression at subcellular resolution during zebrafish nervous system development. Gene Expression Patterns : Gep. 11: 395-400. PMID 21628002 DOI: 10.1016/j.gep.2011.05.002  0.92
2011 Žigman M, Trinh le A, Fraser SE, Moens CB. Zebrafish neural tube morphogenesis requires Scribble-dependent oriented cell divisions. Current Biology : Cb. 21: 79-86. PMID 21185191 DOI: 10.1016/j.cub.2010.12.005  0.92
2010 Choi HM, Chang JY, Trinh le A, Padilla JE, Fraser SE, Pierce NA. Programmable in situ amplification for multiplexed imaging of mRNA expression. Nature Biotechnology. 28: 1208-12. PMID 21037591 DOI: 10.1038/nbt.1692  0.92
2009 Aanstad P, Santos N, Corbit KC, Scherz PJ, Trinh le A, Salvenmoser W, Huisken J, Reiter JF, Stainier DY. The extracellular domain of Smoothened regulates ciliary localization and is required for high-level Hh signaling. Current Biology : Cb. 19: 1034-9. PMID 19464178 DOI: 10.1016/j.cub.2009.04.053  0.92
2007 Trinh le A, McCutchen MD, Bonner-Fraser M, Fraser SE, Bumm LA, McCauley DW. Fluorescent in situ hybridization employing the conventional NBT/BCIP chromogenic stain. Biotechniques. 42: 756-9. PMID 17612300 DOI: 10.2144/000112476  0.92
2005 Trinh LA, Yelon D, Stainier DY. Hand2 regulates epithelial formation during myocardial diferentiation. Current Biology : Cb. 15: 441-6. PMID 15786591 DOI: 10.1016/j.cub.2004.12.083  0.92
2004 Trinh LA, Stainier DY. Cardiac development. Methods in Cell Biology. 76: 455-73. PMID 15602887  0.92
2004 Trinh LA, Stainier DY. Fibronectin regulates epithelial organization during myocardial migration in zebrafish. Developmental Cell. 6: 371-82. PMID 15030760 DOI: 10.1016/S1534-5807(04)00063-2  0.92
2003 Trinh LA, Meyer D, Stainier DY. The Mix family homeodomain gene bonnie and clyde functions with other components of the Nodal signaling pathway to regulate neural patterning in zebrafish. Development (Cambridge, England). 130: 4989-98. PMID 12930774 DOI: 10.1242/dev.00614  0.92
2001 Trinh LA, Ferrini R, Cobb BS, Weinmann AS, Hahm K, Ernst P, Garraway IP, Merkenschlager M, Smale ST. Down-regulation of TDT transcription in CD4(+)CD8(+) thymocytes by Ikaros proteins in direct competition with an Ets activator. Genes & Development. 15: 1817-32. PMID 11459831 DOI: 10.1101/gad.905601  0.92
2000 Kikuchi Y, Trinh LA, Reiter JF, Alexander J, Yelon D, Stainier DY. The zebrafish bonnie and clyde gene encodes a Mix family homeodomain protein that regulates the generation of endodermal precursors. Genes & Development. 14: 1279-89. PMID 10817762  0.92
1999 Ernst P, Hahm K, Cobb BS, Brown KE, Trinh LA, McCarty AS, Merkenschlager M, Klug CA, Fisher AG, Smale ST. Mechanisms of transcriptional regulation in lymphocyte progenitors: insight from an analysis of the terminal transferase promoter. Cold Spring Harbor Symposia On Quantitative Biology. 64: 87-97. PMID 11232341  0.92
1996 Ernst P, Hahm K, Trinh L, Davis JN, Roussel MF, Turck CW, Smale ST. A potential role for Elf-1 in terminal transferase gene regulation. Molecular and Cellular Biology. 16: 6121-31. PMID 8887642  0.92
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