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Albert J. Erives, Ph.D. - Publications

Affiliations: 
1996-1999 Molecular & Cellular Biology University of California, Berkeley, Berkeley, CA, United States 
 2000-2001 Biology Division California Institute of Technology, Pasadena, CA 
 2003-2004 Molecular & Cellular Biology University of California, Berkeley, Berkeley, CA, United States 
 2004-2011 Biological Sciences Dartmouth College, Hanover, NH, United States 
 2012- Biology University of Iowa, Iowa City, IA 
Area:
genetics, gene regulation, molecular evolution, evo-devo
Website:
http://www.biology.uiowa.edu/faculty_info.php?ID=2220
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28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Liu H, Duncan K, Helverson A, Kumari P, Mumm C, Xiao Y, Carlson JC, Darbellay F, Visel A, Leslie E, Breheny P, Erives AJ, Cornell RA. Analysis of zebrafish periderm enhancers facilitates identification of a regulatory variant near human . Elife. 9. PMID 32031521 DOI: 10.7554/Elife.51325  0.359
2020 Liu H, Duncan K, Helverson A, Kumari P, Mumm C, Xiao Y, Carlson JC, Darbellay F, Visel A, Leslie E, Breheny P, Erives AJ, Cornell RA. Author response: Analysis of zebrafish periderm enhancers facilitates identification of a regulatory variant near human KRT8/18 Elife. DOI: 10.7554/Elife.51325.Sa2  0.315
2019 Erives A, Fritzsch B. A Screen for Gene Paralogies Delineating Evolutionary Branching Order of Early Metazoa. G3 (Bethesda, Md.). PMID 31879283 DOI: 10.1534/G3.119.400951  0.394
2019 Vickman O, Erives A. Episodic evolution of a eukaryotic NADK repertoire of ancient provenance. Plos One. 14. PMID 31369599 DOI: 10.1371/Journal.Pone.0220447  0.382
2018 Glover JC, Elliott KL, Erives A, Chizhikov VV, Fritzsch B. Wilhelm His' lasting insights into hindbrain and cranial ganglia development and evolution. Developmental Biology. PMID 29447907 DOI: 10.1016/J.Ydbio.2018.02.001  0.332
2017 Erives AJ. Phylogenetic analysis of the core histone doublet and DNA topo II genes of Marseilleviridae: evidence of proto-eukaryotic provenance. Epigenetics & Chromatin. 10: 55-55. PMID 29179736 DOI: 10.1186/S13072-017-0162-0  0.335
2017 Erives AJ. Evolving Notch polyQ tracts reveal possible solenoid interference elements. Plos One. 12: 174253. PMID 28319202 DOI: 10.1371/Journal.Pone.0174253  0.36
2017 Cox AJ, Darbro BW, Laxer RM, Velez G, Bing X, Finer AL, Erives A, Mahajan VB, Bassuk AG, Ferguson PJ. Recessive coding and regulatory mutations in FBLIM1 underlie the pathogenesis of chronic recurrent multifocal osteomyelitis (CRMO). Plos One. 12: e0169687. PMID 28301468 DOI: 10.1371/Journal.Pone.0169687  0.314
2016 Stroebele E, Erives A. A Notch and Su(H) Dependent Enhancer Complex Coordinates Expression of nab in Drosophila. Genetics. PMID 26975664 DOI: 10.1534/Genetics.116.186791  0.757
2015 Rice C, Beekman D, Liu L, Erives A. The Nature, Extent, and Consequences of Genetic Variation in the opa Repeats of Notch in Drosophila. G3 (Bethesda, Md.). 5: 2405-19. PMID 26362765 DOI: 10.1534/G3.115.021659  0.7
2015 Erives AJ. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Development Genes and Evolution. 225: 259-73. PMID 26173873 DOI: 10.1007/s00427-015-0508-1  0.416
2015 Erives AJ, Fassler JS. Metabolic and chaperone gene loss marks the origin of animals: evidence for Hsp104 and Hsp78 chaperones sharing mitochondrial enzymes as clients. Plos One. 10: e0117192. PMID 25710177 DOI: 10.1371/journal.pone.0117192  0.366
2014 Brittain A, Stroebele E, Erives A. Microsatellite repeat instability fuels evolution of embryonic enhancers in Hawaiian Drosophila. Plos One. 9: e101177. PMID 24978198 DOI: 10.1371/Journal.Pone.0101177  0.581
2014 Wang Q, Lin JL, Erives AJ, Lin CI, Lin JJ. New insights into the roles of Xin repeat-containing proteins in cardiac development, function, and disease. International Review of Cell and Molecular Biology. 310: 89-128. PMID 24725425 DOI: 10.1016/B978-0-12-800180-6.00003-7  0.345
2013 Crocker J, Erives A. A Schnurri/Mad/Medea complex attenuates the dorsal-twist gradient readout at vnd. Developmental Biology. 378: 64-72. PMID 23499655 DOI: 10.1016/J.Ydbio.2013.03.002  0.708
2010 Crocker J, Potter N, Erives A. Dynamic evolution of precise regulatory encodings creates the clustered site signature of enhancers. Nature Communications. 1: 99. PMID 20981027 DOI: 10.1038/Ncomms1102  0.73
2010 Kugler JE, Gazdoiu S, Oda-Ishii I, Passamaneck YJ, Erives AJ, Di Gregorio A. Temporal regulation of the muscle gene cascade by Macho1 and Tbx6 transcription factors in Ciona intestinalis. Journal of Cell Science. 123: 2453-63. PMID 20592183 DOI: 10.1242/Dev.055954  0.392
2009 Erives A. Non-homologous structured CRMs from the Ciona genome. Journal of Computational Biology. 16: 369-377. PMID 19193153 DOI: 10.1089/Cmb.2008.20Tt  0.542
2008 Crocker J, Erives A. A closer look at the eve stripe 2 enhancers of Drosophila and Themira. Plos Genetics. 4: e1000276. PMID 19043578 DOI: 10.1371/Journal.Pgen.1000276  0.751
2008 Crocker J, Tamori Y, Erives A. Evolution acts on enhancer organization to fine-tune gradient threshold readouts. Plos Biology. 6: e263. PMID 18986212 DOI: 10.1371/Journal.Pbio.0060263  0.79
2008 Brown SJ, Cole MD, Erives AJ. Evolution of the holozoan ribosome biogenesis regulon. Bmc Genomics. 9: 442. PMID 18816399 DOI: 10.1186/1471-2164-9-442  0.468
2004 Markstein M, Zinzen R, Markstein P, Yee KP, Erives A, Stathopoulos A, Levine M. A regulatory code for neurogenic gene expression in the Drosophila embryo. Development (Cambridge, England). 131: 2387-94. PMID 15128669 DOI: 10.1242/Dev.01124  0.786
2004 Erives A, Levine MS. Coordinate enhancers share common organizational features in the Drosophila genome Proceedings of the National Academy of Sciences of the United States of America. 101: 3851-3856. PMID 15026577 DOI: 10.1073/Pnas.0400611101  0.653
2002 Stathopoulos A, Van Drenth M, Erives A, Markstein M, Levine M. Whole-genome analysis of dorsal-ventral patterning in the Drosophila embryo. Cell. 111: 687-701. PMID 12464180 DOI: 10.1016/S0092-8674(02)01087-5  0.781
2000 Erives A, Levine M. Characterization of a maternal T-Box gene in Ciona intestinalis. Developmental Biology. 225: 169-78. PMID 10964472 DOI: 10.1006/Dbio.2000.9815  0.575
2000 Hotta K, Takahashi H, Erives A, Levine M, Satoh N. Temporal expression patterns of 39 Brachyury-downstream genes associated with notochord formation in the Ciona intestinalis embryo. Development, Growth & Differentiation. 41: 657-64. PMID 10646795 DOI: 10.1046/j.1440-169x.1999.00467.x  0.465
1999 Takahashi H, Hotta K, Erives A, Di Gregorio A, Zeller RW, Levine M, Satoh N. Brachyury downstream notochord differentiation in the ascidian embryo. Genes & Development. 13: 1519-23. PMID 10385620 DOI: 10.1101/Gad.13.12.1519  0.548
1998 Erives A, Corbo JC, Levine M. Lineage-specific regulation of the Ciona snail gene in the embryonic mesoderm and neuroectoderm. Developmental Biology. 194: 213-25. PMID 9501022 DOI: 10.1006/Dbio.1997.8810  0.706
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