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Lauren J. Francey - Publications

Affiliations: 
2011-2014 Perinatal Institute Cincinnati Children's Hospital and Medical Center 
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29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Koritala BSC, Lee YY, Gaspar LS, Bhadri SS, Su W, Wu G, Francey LJ, Ruben MD, Gong MC, Hogenesch JB, Smith DF. Obstructive sleep apnea in a mouse model is associated with tissue-specific transcriptomic changes in circadian rhythmicity and mean 24-hour gene expression. Plos Biology. 21: e3002139. PMID 37252926 DOI: 10.1371/journal.pbio.3002139  0.632
2023 Cal-Kayitmazbatir S, Francey LJ, Lee Y, Liu AC, Hogenesch JB. PSMD11 modulates circadian clock function through PER and CRY nuclear translocation. Plos One. 18: e0283463. PMID 36961772 DOI: 10.1371/journal.pone.0283463  0.802
2022 Swanson GR, Biglin M, Raff H, Chouhan V, Jochum S, Shaikh M, Francey L, Bishehsari F, Hogenesch J, Keshavarzian A. IMPACT OF CHRONOTHERAPY ON 6-MERCAPTOPURINE METABOLITES IN INFLAMMATORY BOWEL DISEASE: A PILOT CROSSOVER TRIAL. Clinical and Translational Gastroenterology. PMID 36730289 DOI: 10.14309/ctg.0000000000000549  0.494
2022 Lee YY, Endale M, Wu G, Ruben MD, Francey LJ, Morris AR, Choo NY, Anafi RC, Smith DF, Liu AC, Hogenesch JB. Integration of genome-scale data identifies candidate sleep regulators. Sleep. PMID 36462188 DOI: 10.1093/sleep/zsac279  0.745
2022 Wu G, Ruben MD, Francey LJ, Lee YY, Anafi RC, Hogenesch JB. An in silico genome-wide screen for circadian clock strength in human samples. Bioinformatics (Oxford, England). PMID 36321857 DOI: 10.1093/bioinformatics/btac686  0.792
2022 Lee YY, Cal-Kayitmazbatir S, Francey LJ, Bahiru MS, Hayer KE, Wu G, Zeller MJ, Roberts R, Speers J, Koshalek J, Berres ME, Bittman EL, Hogenesch JB. is a null mutation of Cryptochrome 1 in Syrian hamsters. Proceedings of the National Academy of Sciences of the United States of America. 119: e2123560119. PMID 35471909 DOI: 10.1073/pnas.2123560119  0.559
2021 Shen Y, Endale M, Wang W, Morris AR, Francey LJ, Harold RL, Hammers DW, Huo Z, Partch CL, Hogenesch JB, Wu ZH, Liu AC. NF-κB modifies the mammalian circadian clock through interaction with the core clock protein BMAL1. Plos Genetics. 17: e1009933. PMID 34807912 DOI: 10.1371/journal.pgen.1009933  0.635
2021 Wu G, Francey LJ, Ruben MD, Hogenesch JB. Normalized coefficient of variation (nCV): a method to evaluate circadian clock robustness in population scale data. Bioinformatics (Oxford, England). PMID 34726689 DOI: 10.1093/bioinformatics/btab731  0.629
2021 Koritala BSC, Lee YY, Bhadri SS, Gaspar LS, Stanforth C, Wu G, Ruben MD, Francey LJ, Smith DF. Intermittent Hypoxia Alters the Circadian Expression of Clock Genes in Mouse Brain and Liver. Genes. 12. PMID 34681021 DOI: 10.3390/genes12101627  0.486
2021 Wu G, Lee YY, Gulla EM, Potter A, Kitzmiller J, Ruben MD, Salomonis N, Whitsett JA, Francey LJ, Hogenesch JB, Smith DF. Short-term exposure to intermittent hypoxia leads to changes in gene expression seen in chronic pulmonary disease. Elife. 10. PMID 33599610 DOI: 10.7554/eLife.63003  0.596
2020 Wu G, Ruben MD, Francey LJ, Smith DF, Sherrill JD, Oblong JE, Mills KJ, Hogenesch JB. A population-based gene expression signature of molecular clock phase from a single epidermal sample. Genome Medicine. 12: 73. PMID 32825850 DOI: 10.1186/S13073-020-00768-9  0.657
2020 Cal-Kayitmazbatir S, Kulkoyluoglu-Cotul E, Growe J, Selby CP, Rhoades SD, Malik D, Oner H, Asimgil H, Francey LJ, Sancar A, Kruger WD, Hogenesch JB, Weljie A, Anafi RC, Kavakli IH. CRY1-CBS binding regulates circadian clock function and metabolism. The Febs Journal. PMID 32383312 DOI: 10.1111/Febs.15360  0.798
2019 Smith DF, Ruben MD, Francey LJ, Walch OJ, Hogenesch JB. When Should You Take Your Medicines? Journal of Biological Rhythms. 748730419892099. PMID 31813349 DOI: 10.1177/0748730419892099  0.529
2019 Ruben MD, Francey LJ, Guo Y, Wu G, Cooper EB, Shah AS, Hogenesch JB, Smith DF. A large-scale study reveals 24-h operational rhythms in hospital treatment. Proceedings of the National Academy of Sciences of the United States of America. PMID 31575744 DOI: 10.1073/Pnas.1909557116  0.596
2019 Lee Y, Shen Y, Francey LJ, Ramanathan C, Sehgal A, Liu AC, Hogenesch JB. The NRON complex controls circadian clock function through regulated PER and CRY nuclear translocation. Scientific Reports. 9: 11883. PMID 31417156 DOI: 10.1038/S41598-019-48341-8  0.809
2019 Foteinou PT, Venkataraman A, Francey LJ, Anafi RC, Hogenesch JB, Doyle FJ. Reply to Furlan et al.: The role of SIRT1 in cell autonomous clock function. Proceedings of the National Academy of Sciences of the United States of America. PMID 31239349 DOI: 10.1073/Pnas.1907923116  0.728
2018 Wu G, Ruben MD, Schmidt RE, Francey LJ, Smith DF, Anafi RC, Hughey JJ, Tasseff R, Sherrill JD, Oblong JE, Mills KJ, Hogenesch JB. Population-level rhythms in human skin with implications for circadian medicine. Proceedings of the National Academy of Sciences of the United States of America. PMID 30377266 DOI: 10.1073/Pnas.1809442115  0.788
2018 Foteinou PT, Venkataraman A, Francey LJ, Anafi RC, Hogenesch JB, Doyle FJ. Computational and experimental insights into the circadian effects of SIRT1. Proceedings of the National Academy of Sciences of the United States of America. PMID 30348778 DOI: 10.1073/Pnas.1803410115  0.774
2018 Ruben MD, Wu G, Smith DF, Schmidt RE, Francey LJ, Lee YY, Anafi RC, Hogenesch JB. A database of tissue-specific rhythmically expressed human genes has potential applications in circadian medicine. Science Translational Medicine. 10. PMID 30209245 DOI: 10.1126/Scitranslmed.Aat8806  0.795
2018 von Allmen DC, Francey LJ, Rogers GM, Ruben MD, Cohen AP, Wu G, Schmidt RE, Ishman SL, Amin RS, Hogenesch JB, Smith DF. Circadian Dysregulation: The Next Frontier in Obstructive Sleep Apnea Research. Otolaryngology--Head and Neck Surgery : Official Journal of American Academy of Otolaryngology-Head and Neck Surgery. 194599818797311. PMID 30200807 DOI: 10.1177/0194599818797311  0.704
2017 Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, ... ... Francey LJ, et al. Guidelines for Genome-Scale Analysis of Biological Rhythms. Journal of Biological Rhythms. 748730417728663. PMID 29098954 DOI: 10.1177/0748730417728663  0.731
2017 Francey LJ, Hogenesch JB. It's not all in the brain. Elife. 6. PMID 28850329 DOI: 10.7554/Elife.30561  0.552
2017 Krishnaiah SY, Wu G, Altman BJ, Growe J, Rhoades SD, Coldren F, Venkataraman A, Olarerin-George AO, Francey LJ, Mukherjee S, Girish S, Selby CP, Cal S, Er U, Sianati B, et al. Clock Regulation of Metabolites Reveals Coupling between Transcription and Metabolism. Cell Metabolism. 25: 1206. PMID 28467936 DOI: 10.1016/J.Cmet.2017.04.023  0.748
2017 Anafi RC, Francey LJ, Hogenesch JB, Kim J. CYCLOPS reveals human transcriptional rhythms in health and disease. Proceedings of the National Academy of Sciences of the United States of America. PMID 28439010 DOI: 10.1073/Pnas.1619320114  0.777
2017 Krishnaiah SY, Wu G, Altman BJ, Growe J, Rhoades SD, Coldren F, Venkataraman A, Olarerin-George AO, Francey LJ, Mukherjee S, Girish S, Selby CP, Cal S, Er U, Sianati B, et al. Clock Regulation of Metabolites Reveals Coupling between Transcription and Metabolism. Cell Metabolism. 25: 961-974.e4. PMID 28380384 DOI: 10.1016/J.Cmet.2017.03.019  0.748
2016 McGoff KA, Guo X, Deckard A, Kelliher CM, Leman AR, Francey LJ, Hogenesch JB, Haase SB, Harer JL. The Local Edge Machine: inference of dynamic models of gene regulation. Genome Biology. 17: 214. PMID 27760556 DOI: 10.1186/S13059-016-1076-Z  0.594
2015 Lee Y, Jang AR, Francey LJ, Sehgal A, Hogenesch JB. KPNB1 mediates PER/CRY nuclear translocation and circadian clock function. Elife. 4. PMID 26319354 DOI: 10.7554/Elife.08647  0.797
2015 Lee Y, Jang AR, Francey LJ, Sehgal A, Hogenesch JB. Author response: KPNB1 mediates PER/CRY nuclear translocation and circadian clock function Elife. DOI: 10.7554/Elife.08647.020  0.785
2014 Perez-Santángelo S, Mancini E, Francey LJ, Schlaen RG, Chernomoretz A, Hogenesch JB, Yanovsky MJ. Role for LSM genes in the regulation of circadian rhythms. Proceedings of the National Academy of Sciences of the United States of America. 111: 15166-71. PMID 25288739 DOI: 10.1073/Pnas.1409791111  0.637
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