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Ira L. Blitz, Ph.D. - Publications

Affiliations: 
Biological Sciences Illinois State University, Normal, IL, United States 
 1993 Molecular Genetics and Cell Biology University of Chicago & HHMI 
 1993- Developmental and Cell Biology University of California, Irvine, Irvine, CA 
Area:
Developmental Biology
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52 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zhou JJ, Cho JS, Han H, Blitz IL, Wang W, Cho KWY. Histone deacetylase 1 maintains lineage integrity through histone acetylome refinement during early embryogenesis. Elife. 12. PMID 36971347 DOI: 10.7554/eLife.79380  0.796
2022 Jansen C, Paraiso KD, Zhou JJ, Blitz IL, Fish MB, Charney RM, Cho JS, Yasuoka Y, Sudou N, Bright AR, Wlizla M, Veenstra GJC, Taira M, Zorn AM, Mortazavi A, et al. Uncovering the mesendoderm gene regulatory network through multi-omic data integration. Cell Reports. 38: 110364. PMID 35172134 DOI: 10.1016/j.celrep.2022.110364  0.761
2021 Cao Y, Tang L, Du K, Paraiso K, Sun Q, Liu Z, Ye X, Fang Y, Yuan F, Chen YH, Chen Y, Wang X, Yu C, Blitz IL, Wang PH, et al. Anterograde regulation of mitochondrial genes and FGF21 signaling by hepatic LSD1. Jci Insight. PMID 34314389 DOI: 10.1172/jci.insight.147692  0.804
2021 Blitz IL, Nakayama T. CRISPR-Cas9 Mutagenesis in for Phenotypic Analyses in the F Generation and Beyond. Cold Spring Harbor Protocols. PMID 34244352 DOI: 10.1101/pdb.prot106971  0.363
2021 Blitz IL, Cho KWY. Control of zygotic genome activation in Xenopus. Current Topics in Developmental Biology. 145: 167-204. PMID 34074529 DOI: 10.1016/bs.ctdb.2021.03.003  0.491
2020 Mukherjee S, Chatuverdi P, Rankin SA, Fish MB, Wlizla M, Paraiso KD, MacDonald M, Chen X, Weirauch MT, Blitz IL, Cho KW, Zorn AM. Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network. Elife. 9. PMID 32894225 DOI: 10.7554/Elife.58029  0.818
2020 Afouda BA, Nakamura Y, Shaw S, Charney RM, Paraiso KD, Blitz IL, Cho KWY, Hoppler S. Foxh1/Nodal Defines Context-Specific Direct Maternal Wnt/β-Catenin Target Gene Regulation in Early Development. Iscience. 23: 101314. PMID 32650116 DOI: 10.1016/j.isci.2020.101314  0.818
2019 Paraiso KD, Blitz IL, Coley M, Cheung J, Sudou N, Taira M, Cho KWY. Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation. Cell Reports. 27: 2962-2977.e5. PMID 31167141 DOI: 10.1016/j.celrep.2019.05.013  0.834
2019 Paraiso KD, Blitz IL, Zhou JJ, Cho KWY. Morpholinos Do Not Elicit an Innate Immune Response during Early Xenopus Embryogenesis. Developmental Cell. 49: 643-650.e3. PMID 31112700 DOI: 10.1016/j.devcel.2019.04.019  0.771
2018 Cho JS, Blitz IL, Cho KWY. DNase-seq to Study Chromatin Accessibility in Early Embryos. Cold Spring Harbor Protocols. PMID 30131367 DOI: 10.1101/pdb.prot098335  0.628
2018 Blitz IL. Primordial Germ Cell Transplantation for CRISPR/Cas9-based Leapfrogging in Xenopus. Journal of Visualized Experiments : Jove. PMID 29443056 DOI: 10.3791/56035  0.225
2017 Charney RM, Paraiso KD, Blitz IL, Cho KW. A gene regulatory program controlling early Xenopus mesendoderm formation: network conservation and motifs. Seminars in Cell & Developmental Biology. PMID 28341363 DOI: 10.1016/j.semcdb.2017.03.003  0.816
2017 Charney RM, Forouzmand E, Cho JS, Cheung J, Paraiso KD, Yasuoka Y, Takahashi S, Taira M, Blitz IL, Xie X, Cho KW. Foxh1 Occupies cis-Regulatory Modules Prior to Dynamic Transcription Factor Interactions Controlling the Mesendoderm Gene Program. Developmental Cell. PMID 28325473 DOI: 10.1016/J.Devcel.2017.02.017  0.822
2016 Blitz IL, Paraiso KD, Patrushev I, Chiu WT, Cho KW, Gilchrist MJ. A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo. Developmental Biology. PMID 27475627 DOI: 10.1016/j.ydbio.2016.07.002  0.83
2016 Forouzmand E, Owens ND, Blitz IL, Paraiso KD, Khokha MK, Gilchrist MJ, Xie X, Cho KW. Developmentally regulated long non-coding RNAs in Xenopus tropicalis. Developmental Biology. PMID 27418388 DOI: 10.1016/j.ydbio.2016.06.016  0.819
2016 Blitz IL, Fish MB, Cho KW. Leapfrogging: primordial germ cell transplantation permits recovery of CRISPR/Cas9-induced mutations in essential genes. Development (Cambridge, England). PMID 27385011 DOI: 10.1242/dev.138057  0.734
2016 Owens ND, Blitz IL, Lane MA, Patrushev I, Overton JD, Gilchrist MJ, Cho KW, Khokha MK. Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development. Cell Reports. PMID 26774488 DOI: 10.1016/j.celrep.2015.12.050  0.563
2014 Nakayama T, Blitz IL, Fish MB, Odeleye AO, Manohar S, Cho KW, Grainger RM. Cas9-based genome editing in Xenopus tropicalis. Methods in Enzymology. 546: 355-75. PMID 25398349 DOI: 10.1016/B978-0-12-801185-0.00017-9  0.739
2014 Chiu WT, Charney Le R, Blitz IL, Fish MB, Li Y, Biesinger J, Xie X, Cho KW. Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program. Development (Cambridge, England). 141: 4537-47. PMID 25359723 DOI: 10.1242/dev.107227  0.83
2014 Zheng Z, Christley S, Chiu WT, Blitz IL, Xie X, Cho KW, Nie Q. Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns. Bmc Systems Biology. 8: 3. PMID 24397936 DOI: 10.1186/1752-0509-8-3  0.794
2013 Blitz IL, Biesinger J, Xie X, Cho KW. Biallelic genome modification in F(0) Xenopus tropicalis embryos using the CRISPR/Cas system. Genesis (New York, N.Y. : 2000). 51: 827-34. PMID 24123579 DOI: 10.1002/dvg.22719  0.426
2012 Blitz IL. Navigating the Xenopus tropicalis genome. Methods in Molecular Biology (Clifton, N.J.). 917: 43-65. PMID 22956082 DOI: 10.1007/978-1-61779-992-1_4  0.367
2011 Alexander C, Zuniga E, Blitz IL, Wada N, Le Pabic P, Javidan Y, Zhang T, Cho KW, Crump JG, Schilling TF. Combinatorial roles for BMPs and Endothelin 1 in patterning the dorsal-ventral axis of the craniofacial skeleton. Development (Cambridge, England). 138: 5135-46. PMID 22031543 DOI: 10.1242/Dev.067801  0.415
2011 Chiu W, Blitz I, Charney R, Cho J, Park E, Gilchrist M, Cho KW. FoxH1 function in target gene selection and in transcriptional noise control Developmental Biology. 356: 265. DOI: 10.1016/J.Ydbio.2011.05.519  0.793
2011 Luong MN, Blitz I, Cho J, Daily K, Patel V, Baldi P, Cho K. The role of BMP signaling in mouse embryonic stem cells Developmental Biology. 356: 213. DOI: 10.1016/J.Ydbio.2011.05.325  0.315
2011 Onai T, Yu J, Blitz IL, Cho KW, Holland LZ. Corrigendum to “Opposing nodal/Vg1 and BMP signals mediate axial patterning in embryos of the basal chordate amphioxus” [Dev. Biol. 344 (2010) 377–389] Developmental Biology. 352: 179. DOI: 10.1016/J.Ydbio.2011.01.036  0.345
2010 Onai T, Yu JK, Blitz IL, Cho KW, Holland LZ. Opposing Nodal/Vg1 and BMP signals mediate axial patterning in embryos of the basal chordate amphioxus. Developmental Biology. 344: 377-89. PMID 20488174 DOI: 10.1016/J.Ydbio.2010.05.016  0.447
2010 Hellsten U, Harland RM, Gilchrist MJ, Hendrix D, Jurka J, Kapitonov V, Ovcharenko I, Putnam NH, Shu S, Taher L, Blitz IL, Blumberg B, Dichmann DS, Dubchak I, Amaya E, et al. The genome of the Western clawed frog Xenopus tropicalis. Science (New York, N.Y.). 328: 633-6. PMID 20431018 DOI: 10.1126/Science.1183670  0.401
2010 Cho KW, Chiu W, Charney R, Blitz IL, Christley S, Nie Q. Elucidation of the endoderm gene regulatory network by integrating computational methods and perturbation analyses in Xenopus Developmental Biology. 344: 415. DOI: 10.1016/J.Ydbio.2010.05.032  0.788
2009 Blitz IL, Cho KW. Finding partners: how BMPs select their targets. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 238: 1321-31. PMID 19441058 DOI: 10.1002/dvdy.21984  0.523
2009 Hayata T, Blitz IL, Iwata N, Cho KW. Identification of embryonic pancreatic genes using Xenopus DNA microarrays. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 238: 1455-66. PMID 19191222 DOI: 10.1002/Dvdy.21868  0.712
2009 Chiu W, Blitz I, Cho K. Dissecting the gene regulatory network regulated by activin/nodal signaling during Xenopus germ layer specification Developmental Biology. 331: 519. DOI: 10.1016/J.Ydbio.2009.05.492  0.796
2009 Javier AL, Doan L, Blitz I, Monuki E, Cho KW. Uncovering the roles of BMP signaling during mouse embryogenesis Developmental Biology. 331: 483. DOI: 10.1016/J.Ydbio.2009.05.363  0.345
2009 Blitz I, Javier A, Doan L, Schilling T, Monuki E, Cho K. Schnurri functions in an evolutionarily conserved mechanism for BMP target gene regulation Developmental Biology. 331: 479. DOI: 10.1016/J.Ydbio.2009.05.348  0.805
2006 Yao LC, Blitz IL, Peiffer DA, Phin S, Wang Y, Ogata S, Cho KW, Arora K, Warrior R. Schnurri transcription factors from Drosophila and vertebrates can mediate Bmp signaling through a phylogenetically conserved mechanism. Development (Cambridge, England). 133: 4025-34. PMID 17008448 DOI: 10.1242/Dev.02561  0.814
2006 Blitz IL, Andelfinger G, Horb ME. Germ layers to organs: using Xenopus to study "later" development. Seminars in Cell & Developmental Biology. 17: 133-45. PMID 16337415 DOI: 10.1016/j.semcdb.2005.11.002  0.41
2005 von Bubnoff A, Peiffer DA, Blitz IL, Hayata T, Ogata S, Zeng Q, Trunnell M, Cho KW. Phylogenetic footprinting and genome scanning identify vertebrate BMP response elements and new target genes. Developmental Biology. 281: 210-26. PMID 15893974 DOI: 10.1016/J.Ydbio.2005.02.014  0.81
2004 Reinhardt B, Broun M, Blitz IL, Bode HR. HyBMP5-8b, a BMP5-8 orthologue, acts during axial patterning and tentacle formation in hydra. Developmental Biology. 267: 43-59. PMID 14975716 DOI: 10.1016/J.Ydbio.2003.10.031  0.376
2003 Blitz IL, Cho KW, Chang C. Twisted gastrulation loss-of-function analyses support its role as a BMP inhibitor during early Xenopus embryogenesis. Development (Cambridge, England). 130: 4975-88. PMID 12952901 DOI: 10.1242/Dev.00709  0.49
2003 Yoshida Y, von Bubnoff A, Ikematsu N, Blitz IL, Tsuzuku JK, Yoshida EH, Umemori H, Miyazono K, Yamamoto T, Cho KW. Tob proteins enhance inhibitory Smad-receptor interactions to repress BMP signaling. Mechanisms of Development. 120: 629-37. PMID 12782279 DOI: 10.1016/S0925-4773(03)00020-0  0.366
2002 Yu JK, Holland LZ, Jamrich M, Blitz IL, Hollan ND. AmphiFoxE4, an amphioxus winged helix/forkhead gene encoding a protein closely related to vertebrate thyroid transcription factor-2: expression during pharyngeal development. Evolution & Development. 4: 9-15. PMID 11868660 DOI: 10.1046/J.1525-142X.2002.01057.X  0.427
2001 Scott IC, Blitz IL, Pappano WN, Maas SA, Cho KWY, Greenspan DS. Homologues of twisted gastrulation am extracellular cofactors in antagonism of BMP signalling Nature. 410: 475-478. PMID 11260715 DOI: 10.1038/35068572  0.416
2001 Scott IC, Blitz IL, Pappano WN, Maas SA, Cho KWY, Greenspan DS. Erratum: Homologues of Twisted gastrulation are extracellular cofactors in antagonism of BMP signalling Nature. 411: 720-720. DOI: 10.1038/35079659  0.313
2000 Blitz IL, Shimmi O, Wünnenberg-Stapleton K, O'Connor MB, Cho KW. Is chordin a long-range- or short-range-acting factor? Roles for BMP1-related metalloproteases in chordin and BMP4 autofeedback loop regulation. Developmental Biology. 223: 120-38. PMID 10864466 DOI: 10.1006/dbio.2000.9740  0.433
1999 Scott IC, Blitz IL, Pappano WN, Imamura Y, Clark TG, Steiglitz BM, Thomas CL, Maas SA, Takahara K, Cho KWY, Greenspan DS. Mammalian BMP-1/Tolloid-related metalloproteinases, including novel family member mammalian Tolloid-like 2, have differential enzymatic activities and distributions of expression relevant to patterning and skeletogenesis Developmental Biology. 213: 283-300. PMID 10479448 DOI: 10.1006/Dbio.1999.9383  0.353
1999 Smith KM, Gee L, Blitz IL, Bode HR. CnOtx, a member of the Otx gene family, has a role in cell movement in hydra. Developmental Biology. 212: 392-404. PMID 10433829 DOI: 10.1006/Dbio.1999.9337  0.467
1999 Cho KW, Blitz IL. BMPs, Smads and metalloproteases: extracellular and intracellular modes of negative regulation. Current Opinion in Genetics & Development. 8: 443-9. PMID 9729721 DOI: 10.1016/S0959-437X(98)80116-0  0.338
1998 Flink IL, Blitz I, Morkin E. Characterization of cellular nucleic acid binding protein from Xenopus laevis: expression in all three germ layers during early development. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 211: 123-30. PMID 9489766 DOI: 10.1002/(SICI)1097-0177(199802)211:2<123::AID-AJA1>3.0.CO;2-J  0.42
1997 Artinger M, Blitz I, Inoue K, Tran U, Cho KW. Interaction of goosecoid and brachyury in Xenopus mesoderm patterning. Mechanisms of Development. 65: 187-96. PMID 9256355 DOI: 10.1016/S0925-4773(97)00073-7  0.813
1995 Rothbächer U, Laurent MN, Blitz IL, Watabe T, Marsh JL, Cho KWY. Functional Conservation of the Wnt Signaling Pathway Revealed by Ectopic Expression of Drosophila dishevelled in Xenopus Developmental Biology. 170: 717-721. PMID 7649396 DOI: 10.1006/dbio.1995.1249  0.702
1993 Monini P, Blitz IL, Cassai E. Cooperative DNA binding of the bovine papillomavirus E2 transcriptional activator is antagonized by truncated E2 polypeptides. Journal of Virology. 67: 5668-76. PMID 8394466 DOI: 10.1128/Jvi.67.9.5668-5676.1993  0.6
1991 Blitz IL, Laimins LA. The 68-kilodalton E1 protein of bovine papillomavirus is a DNA binding phosphoprotein which associates with the E2 transcriptional activator in vitro Journal of Virology. 65: 649-656. PMID 1846189 DOI: 10.1128/Jvi.65.2.649-656.1991  0.635
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