Deborah L. Gumucio - Publications

Affiliations: 
University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
globin gene switching, familial mediterranean fever, intestinal development

116 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Townshend RF, Shao Y, Wang S, Cortez CL, Esfahani SN, Spence JR, O'Shea KS, Fu J, Gumucio DL, Taniguchi K. Effect of Cell Spreading on Rosette Formation by Human Pluripotent Stem Cell-Derived Neural Progenitor Cells. Frontiers in Cell and Developmental Biology. 8: 588941. PMID 33178701 DOI: 10.3389/fcell.2020.588941  0.32
2020 Walton KD, Gumucio DL. Hedgehog Signaling in Intestinal Development and Homeostasis. Annual Review of Physiology. PMID 33035430 DOI: 10.1146/annurev-physiol-031620-094324  0.8
2020 Wang S, Roy JP, Tomlinson AJ, Wang EB, Tsai YH, Cameron L, Underwood J, Spence JR, Walton K, Stacker SA, Gumucio DL, Lechler T. RYK-mediated filopodial pathfinding facilitates midgut elongation. Development (Cambridge, England). PMID 32994164 DOI: 10.1242/dev.195388  0.32
2019 Wang S, Walton KD, Gumucio DL. Signals and forces shaping organogenesis of the small intestine. Current Topics in Developmental Biology. 132: 31-65. PMID 30797512 DOI: 10.1016/bs.ctdb.2018.12.001  0.8
2018 Walton KD, Mishkind D, Riddle MR, Tabin CJ, Gumucio DL. Blueprint for an intestinal villus: Species-specific assembly required. Wiley Interdisciplinary Reviews. Developmental Biology. PMID 29513926 DOI: 10.1002/wdev.317  0.8
2018 Razumilava N, Gumucio DL, Samuelson LC, Shah YM, Nusrat A, Merchant JL. Indian Hedgehog Suppresses Intestinal Inflammation. Cellular and Molecular Gastroenterology and Hepatology. 5: 63-64. PMID 29276751 DOI: 10.1016/j.jcmgh.2017.10.003  0.68
2016 Kumar N, Srivillibhuthur M, Joshi S, Walton KD, Zhou A, Faller WJ, Perekatt AO, Sansom OJ, Gumucio DL, Xing J, Bonder EM, Gao N, White E, Verzi MP. A YY1-dependent increase in aerobic metabolism is indispensable for intestinal organogenesis. Development (Cambridge, England). 143: 3711-3722. PMID 27802136 DOI: 10.1242/dev.137992  0.8
2016 Walton KD, Freddo AM, Wang S, Gumucio DL. Generation of intestinal surface: an absorbing tale. Development (Cambridge, England). 143: 2261-72. PMID 27381224 DOI: 10.1242/dev.135400  0.8
2016 Gurdziel K, Vogt KR, Walton KD, Schneider GK, Gumucio DL. Transcriptome of the inner circular smooth muscle of the developing mouse intestine: evidence for regulation of visceral smooth muscle genes by the Hedgehog target gene, cJun. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 26930384 DOI: 10.1002/dvdy.24399  0.8
2016 Gurdziel K, Vogt KR, Schneider G, Richards N, Gumucio DL. Computational prediction and experimental validation of novel Hedgehog-responsive enhancers linked to genes of the Hedgehog pathway. Bmc Developmental Biology. 16: 4. PMID 26912062 DOI: 10.1186/s12861-016-0106-0  0.8
2016 Syu LJ, Zhao X, Zhang Y, Grachtchouk M, Demitrack E, Ermilov A, Wilbert DM, Zheng X, Kaatz A, Greenson JK, Gumucio DL, Merchant JL, di Magliano MP, Samuelson LC, Dlugosz AA. Invasive mouse gastric adenocarcinomas arising from Lgr5+ stem cells are dependent on crosstalk between the Hedgehog/GLI2 and mTOR pathways. Oncotarget. PMID 26859571 DOI: 10.18632/oncotarget.7182  0.8
2016 Kumar N, Srivillibhuthur M, Joshi S, Walton KD, Zhou A, Faller WJ, Perekatt AO, Sansom OJ, Gumucio DL, Xing J, Bonder EM, Gao N, White E, Verzi MP. AYY1-dependent increase in aerobic metabolism is indispensable for intestinal organogenesis Development (Cambridge). 143: 3711-3722. DOI: 10.1242/dev.137992  0.8
2015 Walton KD, Whidden M, Kolterud Å, Shoffner S, Czerwinski MJ, Kushwaha J, Parmar N, Chandhrasekhar D, Freddo AM, Schnell S, Gumucio DL. Villification in the mouse: Bmp signals control intestinal villus patterning. Development (Cambridge, England). PMID 26721501 DOI: 10.1242/dev.130112  0.8
2015 Gurdziel K, Lorberbaum DS, Udager AM, Song JY, Richards N, Parker DS, Johnson LA, Allen BL, Barolo S, Gumucio DL. Identification and Validation of Novel Hedgehog-Responsive Enhancers Predicted by Computational Analysis of Ci/Gli Binding Site Density. Plos One. 10: e0145225. PMID 26710299 DOI: 10.1371/journal.pone.0145225  0.8
2015 Taniguchi K, Shao Y, Townshend RF, Tsai YH, DeLong CJ, Lopez SA, Gayen S, Freddo AM, Chue DJ, Thomas DJ, Spence JR, Margolis B, Kalantry S, Fu J, O'Shea KS, ... Gumucio DL, et al. Lumen Formation Is an Intrinsic Property of Isolated Human Pluripotent Stem Cells. Stem Cell Reports. PMID 26626176 DOI: 10.1016/j.stemcr.2015.10.015  0.8
2015 Worthley DL, Churchill M, Compton JT, Tailor Y, Rao M, Si Y, Levin D, Schwartz MG, Uygur A, Hayakawa Y, Gross S, Renz BW, Setlik W, Martinez AN, Chen X, ... ... Gumucio D, et al. Gremlin 1 identifies a skeletal stem cell with bone, cartilage, and reticular stromal potential. Cell. 160: 269-84. PMID 25594183 DOI: 10.1016/j.cell.2014.11.042  0.8
2014 Prakash A, Udager AM, Saenz DA, Gumucio DL. Roles for Nkx2-5 and Gata3 in the ontogeny of the murine smooth muscle gastric ligaments American Journal of Physiology - Gastrointestinal and Liver Physiology. 307: G430-G436. PMID 24970776 DOI: 10.1152/ajpgi.00360.2013  0.8
2014 Whiteman EL, Fan S, Harder JL, Walton KD, Liu CJ, Soofi A, Fogg VC, Hershenson MB, Dressler GR, Deutsch GH, Gumucio DL, Margolis B. Crumbs3 is essential for proper epithelial development and viability. Molecular and Cellular Biology. 34: 43-56. PMID 24164893 DOI: 10.1128/MCB.00999-13  0.8
2014 Udager AM, Prakash A, Saenz DA, Schinke M, Moriguchi T, Jay PY, Lim KC, Engel JD, Gumucio DL. Proper development of the outer longitudinal smooth muscle of the mouse pylorus requires Nkx2-5 and Gata3. Gastroenterology. 146: 157-65.e10. PMID 24120474 DOI: 10.1053/j.gastro.2013.10.008  0.8
2014 Udager AM, Prakash A, Saenz DA, Schinke M, Moriguchi T, Jay PY, Lim KC, Engel JD, Gumucio DL. Proper development of the outer longitudinal smooth muscle of the mouse pylorus requires Nkx2-5 and Gata3 Gastroenterology. 146: 157-165.e10. DOI: 10.1053/j.gastro.2013.10.008  0.8
2013 Liu HX, Ermilov A, Grachtchouk M, Li L, Gumucio DL, Dlugosz AA, Mistretta CM. Multiple Shh signaling centers participate in fungiform papilla and taste bud formation and maintenance. Developmental Biology. 382: 82-97. PMID 23916850 DOI: 10.1016/j.ydbio.2013.07.022  0.8
2013 Sun Y, Zhang M, Chen CC, Gillilland M, Sun X, El-Zaatari M, Huffnagle GB, Young VB, Zhang J, Hong SC, Chang YM, Gumucio DL, Owyang C, Kao JY. Stress-induced corticotropin-releasing hormone-mediated NLRP6 inflammasome inhibition and transmissible enteritis in mice. Gastroenterology. 144: 1478-87, 1487.e1-8. PMID 23470617 DOI: 10.1053/j.gastro.2013.02.038  0.8
2012 Syu LJ, El-Zaatari M, Eaton KA, Liu Z, Tetarbe M, Keeley TM, Pero J, Ferris J, Wilbert D, Kaatz A, Zheng X, Qiao X, Grachtchouk M, Gumucio DL, Merchant JL, et al. Transgenic expression of interferon-γ in mouse stomach leads to inflammation, metaplasia, and dysplasia. The American Journal of Pathology. 181: 2114-25. PMID 23036899 DOI: 10.1016/j.ajpath.2012.08.017  0.8
2012 Walton KD, Kolterud A, Czerwinski MJ, Bell MJ, Prakash A, Kushwaha J, Grosse AS, Schnell S, Gumucio DL. Hedgehog-responsive mesenchymal clusters direct patterning and emergence of intestinal villi. Proceedings of the National Academy of Sciences of the United States of America. 109: 15817-22. PMID 23019366 DOI: 10.1073/pnas.1205669109  0.8
2012 Gumucio DL, Katz JP. Villin-marked gastric progenitor cells: Conveyors or purveyors of precancerous change? Gastroenterology. 142: 424-428. PMID 22285359 DOI: 10.1053/j.gastro.2012.01.012  0.8
2012 VanDussen KL, Carulli AJ, Keeley TM, Patel SR, Puthoff BJ, Magness ST, Tran IT, Maillard I, Siebel C, Kolterud A, Grosse AS, Gumucio DL, Ernst SA, Tsai YH, Dempsey PJ, et al. Notch signaling modulates proliferation and differentiation of intestinal crypt base columnar stem cells Development. 139: 488-497. PMID 22190634 DOI: 10.1242/dev.070763  0.8
2012 Liu HX, Grosse AS, Iwatsuki K, Mishina Y, Gumucio DL, Mistretta CM. Separate and distinctive roles for Wnt5a in tongue, lingual tissue and taste papilla development. Developmental Biology. 361: 39-56. PMID 22024319 DOI: 10.1016/j.ydbio.2011.10.009  0.8
2011 Grosse AS, Pressprich MF, Curley LB, Hamilton KL, Margolis B, Hildebrand JD, Gumucio DL. Cell dynamics in fetal intestinal epithelium: Implications for intestinal growth and morphogenesis Development. 138: 4423-4432. PMID 21880782 DOI: 10.1242/dev.065789  0.8
2011 Saqui-Salces M, Keeley TM, Grosse AS, Qiao XT, El-Zaatari M, Gumucio DL, Samuelson LC, Merchant JL. Gastric tuft cells express DCLK1 and are expanded in hyperplasia. Histochemistry and Cell Biology. 136: 191-204. PMID 21688022 DOI: 10.1007/s00418-011-0831-1  0.8
2011 Qiao XT, Gumucio DL. Current molecular markers for gastric progenitor cells and gastric cancer stem cells Journal of Gastroenterology. 46: 855-865. PMID 21626457 DOI: 10.1007/s00535-011-0413-y  0.8
2011 Zacharias WJ, Madison BB, Kretovich KE, Walton KD, Richards N, Udager AM, Li X, Gumucio DL. Hedgehog signaling controls homeostasis of adult intestinal smooth muscle. Developmental Biology. 355: 152-62. PMID 21545794 DOI: 10.1016/j.ydbio.2011.04.025  0.8
2010 Udager A, Prakash A, Gumucio DL. Dividing the tubular gut: Generation of organ boundaries at the pylorus Progress in Molecular Biology and Translational Science. 96: 35-62. PMID 21075339 DOI: 10.1016/B978-0-12-381280-3.00002-6  0.8
2010 El-Zaatari M, Zavros Y, Tessier A, Waghray M, Lentz S, Gumucio D, Todisco A, Merchant JL. Intracellular calcium release and protein kinase C activation stimulate sonic hedgehog gene expression during gastric acid secretion. Gastroenterology. 139: 2061-2071.e2. PMID 20816837 DOI: 10.1053/j.gastro.2010.08.047  0.8
2010 Smalley-Freed WG, Efimov A, Burnett PE, Short SP, Davis MA, Gumucio DL, Washington MK, Coffey RJ, Reynolds AB. p120-catenin is essential for maintenance of barrier function and intestinal homeostasis in mice. The Journal of Clinical Investigation. 120: 1824-35. PMID 20484816 DOI: 10.1172/JCI41414  0.8
2010 Zacharias WJ, Li X, Madison BB, Kretovich K, Kao JY, Merchant JL, Gumucio DL. Hedgehog is an anti-inflammatory epithelial signal for the intestinal lamina propria. Gastroenterology. 138: 2368-77, 2377.e1-4. PMID 20206176 DOI: 10.1053/j.gastro.2010.02.057  0.8
2010 Cheng J, Waite AL, Tkaczyk ER, Ke K, Richards N, Hunt AJ, Gumucio DL. Kinetic properties of ASC protein aggregation in epithelial cells. Journal of Cellular Physiology. 222: 738-47. PMID 20020448 DOI: 10.1002/jcp.22005  0.8
2009 Li X, Udager AM, Hu C, Qiao XT, Richards N, Gumucio DL. Dynamic patterning at the pylorus: Formation of an epithelial intestine-stomach boundary in late fetal life Developmental Dynamics. 238: 3205-3217. PMID 19877272 DOI: 10.1002/dvdy.22134  0.8
2009 Liu HX, Grosse AM, Walton KD, Saims DA, Gumucio DL, Mistretta CM. WNT5a in tongue and fungiform Papilla development. Annals of the New York Academy of Sciences. 1170: 11-7. PMID 19686099 DOI: 10.1111/j.1749-6632.2009.04369.x  0.8
2009 Waite AL, Schaner P, Richards N, Balci-Peynircioglu B, Masters SL, Brydges SD, Fox M, Hong A, Yilmaz E, Kastner DL, Reinherz EL, Gumucio DL. Pyrin Modulates the Intracellular Distribution of PSTPIP1. Plos One. 4: e6147. PMID 19584923 DOI: 10.1371/journal.pone.0006147  0.8
2009 Gudjonsson JE, Ding J, Li X, Nair RP, Tejasvi T, Qin ZS, Ghosh D, Aphale A, Gumucio DL, Voorhees JJ, Abecasis GR, Elder JT. Global gene expression analysis reveals evidence for decreased lipid biosynthesis and increased innate immunity in uninvolved psoriatic skin. The Journal of Investigative Dermatology. 129: 2795-804. PMID 19571819 DOI: 10.1038/jid.2009.173  0.8
2009 Kolterud A, Grosse AS, Zacharias WJ, Walton KD, Kretovich KE, Madison BB, Waghray M, Ferris JE, Hu C, Merchant JL, Dlugosz AA, Kottmann AH, Gumucio DL. Paracrine Hedgehog signaling in stomach and intestine: new roles for hedgehog in gastrointestinal patterning. Gastroenterology. 137: 618-28. PMID 19445942 DOI: 10.1053/j.gastro.2009.05.002  0.8
2009 Waite AL, Schaner P, Hu C, Richards N, Balci-Peynircioglu B, Hong A, Fox M, Gumucio DL. Pyrin and ASC Co-localize to cellular sites that are rich in polymerizing actin Experimental Biology and Medicine. 234: 40-52. PMID 19109554 DOI: 10.3181/0806-RM-184  0.8
2008 Lees CW, Zacharias WJ, Tremelling M, Noble CL, Nimmo ER, Tenesa A, Cornelius J, Torkvist L, Kao J, Farrington S, Drummond HE, Ho GT, Arnott ID, Appelman HD, Diehl L, ... ... Gumucio DL, et al. Analysis of germline GLI1 variation implicates hedgehog signalling in the regulation of intestinal inflammatory pathways. Plos Medicine. 5: e239. PMID 19071955 DOI: 10.1371/journal.pmed.0050239  0.8
2008 Yang H, Gumucio DL, Teitelbaum DH. Intestinal specific overexpression of interleukin-7 attenuates the alternation of intestinal intraepithelial lymphocytes after total parenteral nutrition administration. Annals of Surgery. 248: 849-56. PMID 18948814 DOI: 10.1097/SLA.0b013e31818a1522  0.8
2008 Balci-Peynircioglu B, Waite AL, Schaner P, Taskiran ZE, Richards N, Orhan D, Gucer S, Ozen S, Gumucio D, Yilmaz E. Expression of ASC in renal tissues of familial mediterranean fever patients with amyloidosis: postulating a role for ASC in AA type amyloid deposition. Experimental Biology and Medicine (Maywood, N.J.). 233: 1324-33. PMID 18791131 DOI: 10.3181/0803-RM-106  0.8
2008 Chae JJ, Wood G, Richard K, Jaffe H, Colburn NT, Masters SL, Gumucio DL, Shoham NG, Kastner DL. The Familial Mediterranean fever protein, pyrin, is cleaved by caspase-1 and activates NF-{kappa}B through its N-terminal fragment Blood. 112: 1794-1803. PMID 18577712 DOI: 10.1182/blood-2008-01-134932  0.8
2008 Gumucio DL, Fagoonee S, Qiao XT, Liebert M, Merchant JL, Altruda F, Rizzetto M, Pellicano R. Tissue stem cells and cancer stem cells: potential implications for gastric cancer. Panminerva Medica. 50: 65-71. PMID 18427389  0.8
2008 Yang H, Madison B, Gumucio DL, Teitelbaum DH. Specific overexpression of IL-7 in the intestinal mucosa: The role in intestinal intraepithelial lymphocyte development American Journal of Physiology - Gastrointestinal and Liver Physiology. 294: G1421-G1430. PMID 18403617 DOI: 10.1152/ajpgi.00060.2008  0.8
2008 Balci-Peynircioglu B, Waite AL, Hu C, Richards N, Staubach-Grosse A, Yilmaz E, Gumucio DL. Pyrin, product of the MEFV locus, interacts with the proapoptotic protein, Siva Journal of Cellular Physiology. 216: 595-602. PMID 18330885 DOI: 10.1002/jcp.21435  0.8
2007 Qiao XT, Ziel JW, McKimpson W, Madison BB, Todisco A, Merchant JL, Samuelson LC, Gumucio DL. Prospective identification of a multilineage progenitor in murine stomach epithelium. Gastroenterology. 133: 1989-98. PMID 18054570 DOI: 10.1053/j.gastro.2007.09.031  0.8
2007 Zavros Y, Waghray M, Tessier A, Bai L, Todisco A, L Gumucio D, Samuelson LC, Dlugosz A, Merchant JL. Reduced pepsin A processing of sonic hedgehog in parietal cells precedes gastric atrophy and transformation. The Journal of Biological Chemistry. 282: 33265-74. PMID 17872943 DOI: 10.1074/jbc.M707090200  0.8
2007 López-Díaz L, Jain RN, Keeley TM, VanDussen KL, Brunkan CS, Gumucio DL, Samuelson LC. Intestinal Neurogenin 3 directs differentiation of a bipotential secretory progenitor to endocrine cell rather than goblet cell fate Developmental Biology. 309: 298-305. PMID 17706959 DOI: 10.1016/j.ydbio.2007.07.015  0.8
2007 Nenci A, Becker C, Wullaert A, Gareus R, van Loo G, Danese S, Huth M, Nikolaev A, Neufert C, Madison B, Gumucio D, Neurath MF, Pasparakis M. Epithelial NEMO links innate immunity to chronic intestinal inflammation. Nature. 446: 557-61. PMID 17361131 DOI: 10.1038/nature05698  0.8
2007 Li X, Madison BB, Zacharias W, Kolterud A, States D, Gumucio DL. Deconvoluting the intestine: Molecular evidence for a major role of the mesenchyme in the modulation of signaling cross talk Physiological Genomics. 29: 290-301. PMID 17299133 DOI: 10.1152/physiolgenomics.00269.2006  0.8
2006 Jones RG, Li X, Gray PD, Kuang J, Clayton F, Samowitz WS, Madison BB, Gumucio DL, Kuwada SK. Conditional deletion of beta1 integrins in the intestinal epithelium causes a loss of Hedgehog expression, intestinal hyperplasia, and early postnatal lethality. The Journal of Cell Biology. 175: 505-14. PMID 17088430 DOI: 10.1083/jcb.200602160  0.8
2006 Adachi M, Kurotani R, Morimura K, Shah Y, Sanford M, Madison BB, Gumucio DL, Marin HE, Peters JM, Young HA, Gonzalez FJ. Peroxisome proliferator activated receptor γ in colonic epithelial cells protects against experimental inflammatory bowel disease Gut. 55: 1104-1113. PMID 16547072 DOI: 10.1136/gut.2005.081745  0.8
2006 Johnson RM, Prychitko T, Gumucio D, Wildman DE, Uddin M, Goodman M. Phylogenetic comparisons suggest that distance from the locus control region guides developmental expression of primate beta-type globin genes. Proceedings of the National Academy of Sciences of the United States of America. 103: 3186-91. PMID 16488971 DOI: 10.1073/pnas.0511347103  0.8
2005 Prychitko T, Johnson RM, Wildman DE, Gumucio D, Goodman M. The phylogenetic history of New World monkey beta globin reveals a platyrrhine beta to delta gene conversion in the atelid ancestry. Molecular Phylogenetics and Evolution. 35: 225-34. PMID 15737593 DOI: 10.1016/j.ympev.2004.11.002  0.8
2005 Schaner PE, Gumucio DL. Familial Mediterranean fever in the post-genomic era: How an ancient disease is providing new insights into inflammatory pathways Current Drug Targets: Inflammation and Allergy. 4: 67-76. PMID 15720238 DOI: 10.2174/1568010053622803  0.8
2005 Madison BB, Braunstein K, Kuizon E, Portman K, Qiao XT, Gumucio DL. Epithelial hedgehog signals pattern the intestinal crypt-villus axis Development. 132: 279-289. PMID 15590741 DOI: 10.1242/dev.01576  0.8
2005 Rieder G, Tessier AJ, Qiao XT, Madison B, Gumucio DL, Merchant JL. Helicobacter-induced intestinal metaplasia in the stomach correlates with Elk-1 and serum response factor induction of villin Journal of Biological Chemistry. 280: 4906-4912. PMID 15576363 DOI: 10.1074/jbc.M413399200  0.8
2004 Diaz A, Hu C, Kastner DL, Schaner P, Reginato AM, Richards N, Gumucio DL. Lipopolysaccharide-induced expression of multiple alternatively spliced MEFV transcripts in human synovial fibroblasts: A prominent splice isoform lacks the C-terminal domain that is highly mutated in familial Mediterranean fever Arthritis and Rheumatism. 50: 3679-3689. PMID 15529356 DOI: 10.1002/art.20600  0.8
2003 Masumoto J, Dowds TA, Schaner P, Chen FF, Ogura Y, Li M, Zhu L, Katsuyama T, Sagara J, Taniguchi S, Gumucio DL, Núñez G, Inohara N. ASC is an activating adaptor for NF-κB and caspase-8-dependent apoptosis Biochemical and Biophysical Research Communications. 303: 69-73. PMID 12646168 DOI: 10.1016/S0006-291X(03)00309-7  0.8
2002 Johnson RM, Gumucio D, Goodman M. Globin gene switching in primates Comparative Biochemistry and Physiology - a Molecular and Integrative Physiology. 133: 877-883. PMID 12443943 DOI: 10.1016/S1095-6433(02)00205-2  0.8
2002 Gumucio DL, Diaz A, Schaner P, Richards N, Babcock C, Schaller M, Cesena T. Fire and ICE: The role of pyrin domain-containing proteins in inflammation and apoptosis Clinical and Experimental Rheumatology. 20: S45-S53. PMID 12371636  0.8
2002 Madison BB, Dunbar L, Qiao XT, Braunstein K, Braunstein E, Gumucio DL. cis elements of the villin gene control expression in restricted domains of the vertical (crypt) and horizontal (duodenum, cecum) axes of the intestine Journal of Biological Chemistry. 277: 33275-33283. PMID 12065599 DOI: 10.1074/jbc.M204935200  0.8
2002 Braunstein EM, Qiao XT, Madison B, Pinson K, Dunbar L, Gumucio DL. Villin: A marker for development of the epithelial pyloric border Developmental Dynamics. 224: 90-102. PMID 11984877 DOI: 10.1002/dvdy.10091  0.8
2002 Yu T, Thomas DM, Zhu W, Goodman M, Gumucio DL. Regulation of fetal versus embryonic gamma globin genes: Appropriate developmental stage expression patterns in the presence of HS2 of the locus control region Blood. 99: 1082-1084. PMID 11807017 DOI: 10.1182/blood.V99.3.1082  0.8
2001 Richards N, Schaner P, Diaz A, Stuckey J, Shelden E, Wadhwa A, Gumucio DL. Interaction between Pyrin and the Apoptotic Speck Protein (ASC) Modulates ASC-induced Apoptosis Journal of Biological Chemistry. 276: 39320-39329. PMID 11498534 DOI: 10.1074/jbc.M104730200  0.8
2001 Kennell JA, Richards NW, Schaner PE, Gumucio DL. cDNA cloning, chromosomal localization and evolutionary analysis of mouse vacuolar ATPase subunit D, Atp6m Cytogenetics and Cell Genetics. 92: 337-341. PMID 11435709  0.8
2001 Schaner P, Richards N, Wadhwa A, Aksentijevich I, Kastner D, Tucker P, Gumucio D. Episodic evolution of pyrin in primates: human mutations recapitulate ancestral amino acid states. Nature Genetics. 27: 318-21. PMID 11242116 DOI: 10.1038/85893  0.8
2000 Johnson RM, Buck S, Chiu CH, Gage DA, Shen TL, Hendrickx AG, Gumucio DL, Goodman M. Humans and Old World monkeys have similar patterns of fetal globin expression Journal of Experimental Zoology. 288: 318-326. PMID 11144280 DOI: 10.1002/1097-010X(20001215)288:4<318::AID-JEZ4>3.0.CO;2-0  0.8
1999 Stojanovic N, Florea L, Riemer C, Gumucio D, Slightom J, Goodman M, Miller W, Hardison R. Comparison of five methods for finding conserved sequences in multiple alignments of gene regulatory regions Nucleic Acids Research. 27: 3899-3910. PMID 10481030 DOI: 10.1093/nar/27.19.3899  0.8
1999 Chiu CH, Gregoire L, Gumucio DL, Muniz JA, Lancaster WD, Goodman M. Model for the fetal recruitment of simian gamma-globin genes based on findings from two New World monkeys Cebus apella and Callithrix jacchus (Platyrrhini, Primates). The Journal of Experimental Zoology. 285: 27-40. PMID 10327648 DOI: 10.1002/(SICI)1097-010X(19990415)285:1<27::AID-JEZ4>3.0.CO;2-0  0.8
1999 Zhu W, TomHon C, Mason M, Campbell T, Shelden E, Richards N, Goodman M, Gumucio DL. Analysis of linked human ε and γ transgenes: Effect of locus control region hypersensitive sites 2 and 3 or a distal YY1 mutation on stage- specific expression patterns Blood. 93: 3540-3549. PMID 10233907  0.8
1998 Centola M, Chen X, Sood R, Deng Z, Aksentijevich I, Blake T, Ricke DO, Chen X, Wood G, Zaks N, Richards N, Krizman D, Mansfield E, Apostolou S, Liu J, ... ... Gumucio D, et al. Construction of an approximately 700-kb transcript map around the familial Mediterranean fever locus on human chromosome 16p13.3. Genome Research. 8: 1172-91. PMID 9847080 DOI: 10.1101/gr.8.11.1172  0.8
1998 Pinson KI, Dunbar L, Samuelson L, Gumucio DL. Targeted disruption of the mouse villin gene does not impair the morphogenesis of microvilli Developmental Dynamics. 211: 109-121. PMID 9438428 DOI: 10.1002/(SICI)1097-0177(199801)211:1<109::AID-AJA10>3.0.CO;2-7  0.8
1997 Hardison R, Slightom JL, Gumucio DL, Goodman M, Stojanovic N, Miller W. Locus control regions of mammalian β-globin gene clusters: Combining phylogenetic analyses and experimental results to gain functional insights Gene. 205: 73-94. PMID 9461381 DOI: 10.1016/S0378-1119(97)00474-5  0.8
1997 Chiu CH, Schneider H, Slightom JL, Gumucio DL, Goodman M. Dynamics of regulatory evolution in primate β-globin gene clusters: cis-mediated aquisition of simian γ fetal expression patterns Gene. 205: 47-57. PMID 9461379 DOI: 10.1016/S0378-1119(97)00476-9  0.8
1997 Balow JE, Shelton DA, Orsborn A, Mangelsdorf M, Aksentijevich I, Blake T, Sood R, Gardner D, Liu R, Pras E, Levy EN, Centola M, Deng Z, Zaks N, Wood G, et al. A high-resolution genetic map of the familial Mediterranean fever candidate region allows identification of haplotype-sharing among ethnic groups. Genomics. 44: 280-91. PMID 9325049 DOI: 10.1006/geno.1997.4860  0.8
1997 Aksentijevich I, Centola M, Deng Z, Sood R, Balow J.E. J, Wood G, Zaks N, Mansfield E, Chen X, Eisenberg S, Vedula A, Shafran N, Raben N, Pras E, Pras M, ... ... Gumucio D, et al. Ancient missense mutations in a new member of the RoRet gene family are likely to cause familial Mediterranean fever Cell. 90: 797-807. PMID 9288758 DOI: 10.1016/S0092-8674(00)80539-5  0.8
1997 Livneh A, Drenth JPH, Klasen IS, Langevitz P, George J, Shelton DA, Gumucio DL, Pras E, Kastner DL, Pras M, Van Der Meer JWM. Familial Mediterranean fever and hyperimmunoglobulinemia D syndrome: Two diseases with distinct clinical, serologic, and genetic features Journal of Rheumatology. 24: 1558-1563. PMID 9263151  0.8
1997 Sood R, Blake T, Aksentijevich I, Wood G, Chen X, Gardner D, Shelton DA, Mangelsdorf M, Orsborn A, Pras E, Balow JE, Centola M, Deng Z, Zaks N, Chen X, ... ... Gumucio DL, et al. Construction of a 1-Mb restriction-mapped cosmid contig containing the candidate region for the familial Mediterranean fever locus (MEFV) on chromosome 16p 13.3. Genomics. 42: 83-95. PMID 9177779 DOI: 10.1006/geno.1997.4629  0.8
1997 TomHon C, Zhu W, Millinoff D, Hayasaka K, Slightom JL, Goodman M, Gumucio DL. Evolution of a fetal expression pattern via cis changes near the γ globin gene Journal of Biological Chemistry. 272: 14062-14066. PMID 9162029 DOI: 10.1074/jbc.272.22.14062  0.8
1997 Shelton DA, Stegman L, Hardison R, Miller W, Bock JH, Slightom JL, Goodman M, Gumucio DL. Phylogenetic footprinting of hypersensitive site 3 of the beta-globin locus control region. Blood. 89: 3457-69. PMID 9129054  0.8
1997 Slightom JL, Bock JH, Tagle DA, Gumucio DL, Goodman M, Stojanovic N, Jackson J, Miller W, Hardison R. The complete sequences of the galago and rabbit beta-globin locus control regions: extended sequence and functional conservation outside the cores of DNase hypersensitive sites. Genomics. 39: 90-4. PMID 9027490 DOI: 10.1006/geno.1996.4458  0.8
1997 Stojanovic N, Berman P, Gumucio D, Hardison R, Miller W. A linear-time algorithm for the 1-mismatch problem Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 1272: 126-135.  0.8
1996 Johnson RM, Buck S, Chiu C, Schneider H, Sampaio I, Gage DA, Shen TL, Schneider MP, Muniz JA, Gumucio DL, Goodman M. Fetal globin expression in New World monkeys. The Journal of Biological Chemistry. 271: 30298. PMID 8991898  0.8
1996 Chiu CH, Schneider H, Schneider MP, Sampaio I, Meireles C, Slightom JL, Gumucio DL, Goodman M. Reduction of two functional gamma-globin genes to one: an evolutionary trend in New World monkeys (infraorder Platyrrhini). Proceedings of the National Academy of Sciences of the United States of America. 93: 6510-5. PMID 8692846 DOI: 10.1073/pnas.93.13.6510  0.8
1996 Gumucio DL, Shelton DA, Zhu W, Millinoff D, Gray T, Bock JH, Slightom JL, Goodman M. Evolutionary strategies for the elucidation of cis and trans factors that regulate the developmental switching programs of the beta-like globin genes. Molecular Phylogenetics and Evolution. 5: 18-32. PMID 8673285 DOI: 10.1006/mpev.1996.0004  0.8
1996 Johnson RM, Buck S, Chiu C, Schneider H, Sampaio I, Gage DA, Shen TL, Schneider MP, Muniz JA, Gumucio DL, Goodman M. Fetal globin expression in New World monkeys. The Journal of Biological Chemistry. 271: 14684-91. PMID 8663037 DOI: 10.1074/jbc.271.25.14684  0.8
1996 Levy EN, Shen Y, Kupelian A, Kruglyak L, Aksentijevich I, Pras E, Balow JE, Linzer B, Chen X, Shelton DA, Gumucio D, Pras M, Shohat M, Rotter JI, Fischel-Ghodsian N, et al. Linkage disequilibrium mapping places the gene causing familial Mediterranean fever close to D16S246. American Journal of Human Genetics. 58: 523-34. PMID 8644712  0.8
1995 Jankowski SA, Gumucio DL. Genes for tesin, villin and desmin are linked on mouse Chromosome 1 Mammalian Genome. 6: 744-745. PMID 8563175 DOI: 10.1007/BF00354299  0.8
1995 Meireles CMM, Schneider MPC, Sampaio MIC, Schneider H, Slightom JL, Chiu CH, Neiswanger K, Gumucio DL, Czelusniak J, Goodman M. Fate of a redundant γ-globin gene in the atelid clade of new world monkeys: Implications concerning fetal globin gene expression Proceedings of the National Academy of Sciences of the United States of America. 92: 2607-2611. PMID 7535927 DOI: 10.1073/pnas.92.7.2607  0.8
1995 Yant SR, Zhu W, Millinoff D, Slightom JL, Goodman M, Gumucio DL. High affinity YY1 binding motifs: Identification of two core types (ACAT and CCAT) and distribution of potential binding sites within the human β globin cluster Nucleic Acids Research. 23: 4353-4362. PMID 7501456 DOI: 10.1093/nar/23.21.4353  0.8
1994 Zhu W, Lossie AC, Camper SA, Gumucio DL. Chromosomal localization of the transcription factor YY1 in the mouse and human Mammalian Genome. 5: 234-236. PMID 7912122 DOI: 10.1007/BF00360552  0.8
1994 Gumucio DL, Shelton DA, Blanchard-McQuate K, Gray T, Tarle S, Heilstedt-Williamson H, Slightom JL, Collins F, Goodman M. Differential phylogenetic footprinting as a means to identify base changes responsible for recruitment of the anthropoid γ gene to a fetal expression pattern Journal of Biological Chemistry. 269: 15371-15380. PMID 7515056  0.8
1993 Gumucio DL, Shelton DA, Bailey WJ, Slightom JL, Goodman M. Phylogenetic footprinting reveals unexpected complexity in trans factor binding upstream from the epsilon-globin gene. Proceedings of the National Academy of Sciences of the United States of America. 90: 6018-22. PMID 8327477  0.8
1993 Jane SM, Gumucio DL, Ney PA, Cunningham JM, Nienhuis AW. Methylation-enhanced binding of Sp1 to the stage selector element of the human gamma-globin gene promoter may regulate development specificity of expression. Molecular and Cellular Biology. 13: 3272-81. PMID 7684493  0.8
1992 Jane SM, Ney PA, Vanin EF, Gumucio DL, Nienhuis AW. Identification of a stage selector element in the human γ-globin gene promoter that fosters preferential interaction with the 5′ HS2 enhancer when in competition with the β-promoter Embo Journal. 11: 2961-2969. PMID 1639067  0.8
1992 Gumucio DL, Heilstedt-Williamson H, Gray TA, Tarlé SA, Shelton DA, Tagle DA, Slightom JL, Goodman M, Collins FS. Phylogenetic footprinting reveals a nuclear protein which binds to silencer sequences in the human γ and ε globin genes Molecular and Cellular Biology. 12: 4919-4929. PMID 1406669 DOI: 10.1128/MCB.12.11.4919  0.8
1991 Traber PG, Gumucio DL, Wang W. Isolation of intestinal epithelial cells for the study of differential gene expression along the crypt-villus axis American Journal of Physiology - Gastrointestinal and Liver Physiology. 260: G895-G903. PMID 2058677  0.8
1991 Morgan DA, Gumucio DL, Brodsky I. Granulocyte-macrophage colony-stimulating factor-dependent growth and erythropoietin-induced differentiation of a human cell line MB-02 Blood. 78: 2860-2871. PMID 1954374  0.8
1991 Gumucio DL, Rood KL, Blanchard-McQuate KL, Gray TA, Saulino A, Collins FS. Interaction of Sp1 with the human gamma globin promoter: binding and transactivation of normal and mutant promoters. Blood. 78: 1853-63. PMID 1912570  0.8
1990 Gumucio DL, Lockwood WK, Weber JL, Saulino AM, Delgrosso K, Surrey S, Schwartz E, Goodman M, Collins FS. The -175T → C mutation increases promoter strength in erythroid cells: Correlation with evolutionary conservation of binding sites for two trans-acting factors Blood. 75: 756-761. PMID 1688723  0.8
1989 Gumucio DL, Gray TA, Rood KL, Blanchard KL, Collins FS. Nuclear proteins which bind the human gamma-globin gene. Progress in Clinical and Biological Research. 316: 129-38. PMID 2480606  0.8
1988 Gumucio DL, Rood KL, Gray TA, Riordan MF, Sartor CI, Collins FS. Nuclear proteins that bind the human gamma-globin gene promoter: alterations in binding produced by point mutations associated with hereditary persistence of fetal hemoglobin. Molecular and Cellular Biology. 8: 5310-22. PMID 2468996  0.8
1988 Samuelson LC, Wiebauer K, Gumucio DL, Meisler MH. Expression of the human amylase genes: Recent origin of a salivary amylase promoter from an actin pseudogene Nucleic Acids Research. 16: 8261-8276. PMID 2458567 DOI: 10.1093/nar/16.17.8261  0.8
1988 Gumucio DL, Wiebauer K, Caldwell RM, Samuelson LC, Meisler MH. Concerted evolution of human amylase genes Molecular and Cellular Biology. 8: 1197-1205. PMID 2452973  0.8
1986 Takeuchi T, Gumucio DL, Yamada T, Meisler MH, Minth CD, Dixon JE, Eddy RE, Shows TB. Genes encoding pancreatic polypeptide and neuropeptide Y are on human chromosomes 17 and 7 Journal of Clinical Investigation. 77: 1038-1041. PMID 3753985  0.8
1986 Meisler MH, Antonucci TK, Treisman LO, Gumucio DL, Samuelson LC. Interstrain variation in amylase gene copy number and mRNA abundance in three mouse tissues Genetics. 113: 713-722. PMID 3488242  0.8
1986 Darlington GJ, Tsai CC, Samuelson LC, Gumucio DL, Meisler MH. Simultaneous expression of salivary and pancreatic amylase genes in cultured mouse hepatoma cells Molecular and Cellular Biology. 6: 969-975. PMID 2431276  0.8
1985 Gumucio DL, Wiebauer K, Dranginis A, Samuelson LC, Treisman LO, Caldwell RM, Antonucci TK, Meisler MH. Evolution of the amylase multigene family. YBR/Ki mice express a pancreatic amylase gene which is silent in other strains Journal of Biological Chemistry. 260: 13483-13489. PMID 2414282  0.8
1985 Wiebauer K, Gumucio DL, Jones JM, Caldwell RM, Hartle HT, Meisler MH. A 78-kilobase region of mouse chromosome 3 contains salivary and pancreatic amylase genes and a pseudogene Proceedings of the National Academy of Sciences of the United States of America. 82: 5446-5449. PMID 2410924 DOI: 10.1073/pnas.82.16.5446  0.8
1984 Chen EH, Gumucio JJ, Ho NH, Gumucio DL. Hepatocytes of zones 1 and 3 conjugate sulfobromophthalein with glutathione Hepatology. 4: 467-476. PMID 6724515  0.8
1984 Gumucio DL, Gumucio JJ, Wilson JA, Cutter C, Krauss M, Caldwell R, Chen E. Albumin influences sulfobromophthalein transport by hepatocytes of each acinar zone. The American Journal of Physiology. 246: G86-95. PMID 6696072  0.8
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