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Michael Hagan - Publications

Affiliations: 
2011-2012 Brandeis University, Waltham, MA, United States 
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53 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Wei WS, Trubiano A, Sigl C, Paquay S, Dietz H, Hagan MF, Fraden S. Hierarchical assembly is more robust than egalitarian assembly in synthetic capsids. Proceedings of the National Academy of Sciences of the United States of America. 121: e2312775121. PMID 38324570 DOI: 10.1073/pnas.2312775121  0.376
2023 Asor R, Singaram SW, Levi-Kalisman Y, Hagan MF, Raviv U. Effect of ionic strength on the assembly of simian vacuolating virus capsid protein around poly(styrene sulfonate). The European Physical Journal. E, Soft Matter. 46: 107. PMID 37917241 DOI: 10.1140/epje/s10189-023-00363-x  0.358
2023 Hagan MF, Mohajerani F. Self-assembly coupled to liquid-liquid phase separation. Plos Computational Biology. 19: e1010652. PMID 37186597 DOI: 10.1371/journal.pcbi.1010652  0.357
2023 Trubiano A, Hagan MF. Optimization of non-equilibrium self-assembly protocols using Markov state models. The Journal of Chemical Physics. 157: 244901. PMID 36586982 DOI: 10.1063/5.0130407  0.358
2022 Hayakawa D, Videbaek TE, Hall DM, Fang H, Sigl C, Feigl E, Dietz H, Fraden S, Hagan MF, Grason GM, Rogers WB. Geometrically programmed self-limited assembly of tubules using DNA origami colloids. Proceedings of the National Academy of Sciences of the United States of America. 119: e2207902119. PMID 36252043 DOI: 10.1073/pnas.2207902119  0.367
2022 Mohajerani F, Tyukodi B, Schlicksup CJ, Hadden-Perilla JA, Zlotnick A, Hagan MF. Multiscale Modeling of Hepatitis B Virus Capsid Assembly and Its Dimorphism. Acs Nano. PMID 36054910 DOI: 10.1021/acsnano.2c02119  0.306
2022 Fang H, Tyukodi B, Rogers WB, Hagan MF. Polymorphic self-assembly of helical tubules is kinetically controlled. Soft Matter. PMID 36039801 DOI: 10.1039/d2sm00679k  0.407
2022 Tsidilkovski L, Mohajerani F, Hagan MF. Microcompartment assembly around multicomponent fluid cargoes. The Journal of Chemical Physics. 156: 245104. PMID 35778087 DOI: 10.1063/5.0089556  0.365
2022 Tyukodi B, Mohajerani F, Hall DM, Grason GM, Hagan MF. Thermodynamic Size Control in Curvature-Frustrated Tubules: Self-Limitation with Open Boundaries. Acs Nano. PMID 35638478 DOI: 10.1021/acsnano.2c00865  0.394
2022 Videbaek TE, Fang H, Hayakawa D, Tyukodi B, Hagan MF, Rogers WB. Tiling a tubule: How increasing complexity improves the yield of self-limited assembly. Journal of Physics. Condensed Matter : An Institute of Physics Journal. PMID 34983038 DOI: 10.1088/1361-648X/ac47dd  0.356
2021 Hagan MF, Grason GM. Equilibrium mechanisms of self-limiting assembly. Reviews of Modern Physics. 93. PMID 35221384 DOI: 10.1103/revmodphys.93.025008  0.377
2021 Mohajerani F, Sayer E, Neil C, Inlow K, Hagan MF. Mechanisms of Scaffold-Mediated Microcompartment Assembly and Size Control. Acs Nano. 15: 4197-4212. PMID 33683101 DOI: 10.1021/acsnano.0c05715  0.388
2020 Chelakkot R, Hagan MF, Gopinath A. Synchronized oscillations, traveling waves, and jammed clusters induced by steric interactions in active filament arrays. Soft Matter. PMID 33289748 DOI: 10.1039/d0sm01162b  0.739
2018 Mohajerani F, Hagan MF. The role of the encapsulated cargo in microcompartment assembly. Plos Computational Biology. 14: e1006351. PMID 30063715 DOI: 10.1371/journal.pcbi.1006351  0.356
2018 Mohajerani F, Hagan MF. The role of the encapsulated cargo in microcompartment assembly. Plos Computational Biology. 14: e1006351. PMID 30063715 DOI: 10.1371/journal.pcbi.1006351  0.356
2018 Lázaro GR, Dragnea B, Hagan MF. Self-assembly of convex particles on spherocylindrical surfaces. Soft Matter. PMID 29796568 DOI: 10.1039/C8Sm00129D  0.402
2018 Zeng C, Rodriguez Lázaro G, Tsvetkova IB, Hagan MF, Dragnea B. Defects and Chirality in the Nanoparticle-Directed Assembly of Spherocylindrical Shells of Virus Coat Proteins. Acs Nano. PMID 29694012 DOI: 10.1021/Acsnano.8B00069  0.319
2017 Michaels TCT, Bellaiche MMJ, Hagan MF, Knowles TPJ. Kinetic constraints on self-assembly into closed supramolecular structures. Scientific Reports. 7: 12295. PMID 28947758 DOI: 10.1038/s41598-017-12528-8  0.379
2016 Perkett MR, Mirijanian DT, Hagan MF. The allosteric switching mechanism in bacteriophage MS2. The Journal of Chemical Physics. 145: 035101. PMID 27448905 DOI: 10.1063/1.4955187  0.76
2016 Xie S, Pelcovits RA, Hagan MF. Probing a self-assembled fd virus membrane with a microtubule. Physical Review. E. 93: 062608. PMID 27415321 DOI: 10.1103/Physreve.93.062608  0.336
2016 Perlmutter JD, Mohajerani F, Hagan MF. Many-molecule encapsulation by an icosahedral shell. Elife. 5. PMID 27166515 DOI: 10.7554/Elife.14078  0.401
2016 Lázaro GR, Hagan MF. Allosteric Control of Icosahedral Capsid Assembly. The Journal of Physical Chemistry. B. PMID 27117092 DOI: 10.1021/acs.jpcb.6b02768  0.396
2016 Hagan MF, Zandi R. Recent advances in coarse-grained modeling of virus assembly. Current Opinion in Virology. 18: 36-43. PMID 27016708 DOI: 10.1016/J.Coviro.2016.02.012  0.31
2015 Ruiz-Herrero T, Hagan MF. Simulations show that virus assembly and budding are facilitated by membrane microdomains. Biophysical Journal. 108: 585-95. PMID 25650926 DOI: 10.1016/j.bpj.2014.12.017  0.334
2015 Perlmutter JD, Hagan MF. Mechanisms of virus assembly. Annual Review of Physical Chemistry. 66: 217-39. PMID 25532951 DOI: 10.1146/Annurev-Physchem-040214-121637  0.342
2014 Hagan MF. Modeling Viral Capsid Assembly. Advances in Chemical Physics. 155: 1-68. PMID 25663722 DOI: 10.1002/9781118755815.ch01  0.401
2014 Perlmutter JD, Perkett MR, Hagan MF. Pathways for virus assembly around nucleic acids. Journal of Molecular Biology. 426: 3148-65. PMID 25036288 DOI: 10.1016/J.Jmb.2014.07.004  0.787
2014 Perkett MR, Hagan MF. Using Markov state models to study self-assembly. The Journal of Chemical Physics. 140: 214101. PMID 24907984 DOI: 10.1063/1.4878494  0.799
2014 Chelakkot R, Gopinath A, Mahadevan L, Hagan MF. Flagellar dynamics of a connected chain of active, polar, Brownian particles. Journal of the Royal Society, Interface / the Royal Society. 11: 20130884. PMID 24352670 DOI: 10.1098/Rsif.2013.0884  0.761
2013 Perlmutter JD, Hagan MF. Brownian Dynamics Simulations of Polymer Mediated Capsid Assembly Biophysical Journal. 104: 413a-414a. DOI: 10.1016/J.Bpj.2012.11.2305  0.448
2012 Yang Y, Barry E, Dogic Z, Hagan MF. Self-assembly of 2D membranes from mixtures of hard rods and depleting polymers(). Soft Matter. 8: 707-714. PMID 23139699 DOI: 10.1039/C1Sm06201H  0.807
2012 Patel AJ, Varilly P, Jamadagni SN, Hagan MF, Chandler D, Garde S. Sitting at the edge: how biomolecules use hydrophobicity to tune their interactions and function. The Journal of Physical Chemistry. B. 116: 2498-503. PMID 22235927 DOI: 10.1021/Jp2107523  0.729
2012 Gibaud T, Barry E, Zakhary MJ, Henglin M, Ward A, Yang Y, Berciu C, Oldenbourg R, Hagan MF, Nicastro D, Meyer RB, Dogic Z. Reconfigurable self-assembly through chiral control of interfacial tension. Nature. 481: 348-51. PMID 22217941 DOI: 10.1038/Nature10769  0.783
2012 Giomi L, Mahadevan L, Chakraborty B, Hagan MF. Banding, excitability and chaos in active nematic suspensions Nonlinearity. 25: 2245-2269. DOI: 10.1088/0951-7715/25/8/2245  0.688
2012 McCandlish SR, Baskaran A, Hagan MF. Spontaneous segregation of self-propelled particles with different motilities Soft Matter. 8: 2527-2534. DOI: 10.1039/C2Sm06960A  0.314
2011 Yang Y, Hagan MF. Theoretical calculation of the phase behavior of colloidal membranes. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 84: 051402. PMID 22181412 DOI: 10.1103/Physreve.84.051402  0.767
2011 Hagan MF, Elrad OM, Jack RL. Mechanisms of kinetic trapping in self-assembly and phase transformation. The Journal of Chemical Physics. 135: 104115. PMID 21932884 DOI: 10.1063/1.3635775  0.774
2011 Sumedha, Hagan MF, Chakraborty B. Prolonging assembly through dissociation: a self-assembly paradigm in microtubules. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 83: 051904. PMID 21732705 DOI: 10.1103/Physreve.83.051904  0.34
2011 Giomi L, Mahadevan L, Chakraborty B, Hagan MF. Excitable patterns in active nematics. Physical Review Letters. 106: 218101. PMID 21699344 DOI: 10.1103/Physrevlett.106.218101  0.716
2011 Sumedha, Hagan MF, Chakraborty B. Prolonging assembly through dissociation: A self-assembly paradigm in microtubules Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 83. DOI: 10.1103/PhysRevE.83.051904  0.332
2011 Elrad OM, Hagan MF. Dynamic Encapsidation of a Flexible Polymer by an Icosahedral Virus Biophysical Journal. 100: 402a. DOI: 10.1016/J.Bpj.2010.12.2390  0.802
2010 Elrad OM, Hagan MF. Encapsulation of a polymer by an icosahedral virus. Physical Biology. 7: 045003. PMID 21149971 DOI: 10.1088/1478-3975/7/4/045003  0.803
2010 Yang Y, Meyer RB, Hagan MF. Self-limited self-assembly of chiral filaments. Physical Review Letters. 104: 258102. PMID 20867417 DOI: 10.1103/Physrevlett.104.258102  0.796
2010 Kivenson A, Hagan MF. Mechanisms of capsid assembly around a polymer. Biophysical Journal. 99: 619-28. PMID 20643082 DOI: 10.1016/J.Bpj.2010.04.035  0.795
2010 Hagan MF, Elrad OM. Understanding the concentration dependence of viral capsid assembly kinetics--the origin of the lag time and identifying the critical nucleus size. Biophysical Journal. 98: 1065-74. PMID 20303864 DOI: 10.1016/J.Bpj.2009.11.023  0.781
2009 Whitelam S, Feng EH, Hagan MF, Geissler PL. The role of collective motion in examples of coarsening and self-assembly. Soft Matter. 5: 1251-1262. PMID 23227104 DOI: 10.1039/B810031D  0.588
2009 Whitelam S, Feng EH, Hagan MF, Geissler PL. The role of collective motion in examples of coarsening and self-assembly Soft Matter. 5: 1251-1262. DOI: 10.1039/b810031d  0.575
2009 Kivenson A, Hagan MF. Mechanisms Of Viral Capsid Assembly Around A Polymer Biophysical Journal. 96: 420a. DOI: 10.1016/J.Bpj.2008.12.2146  0.796
2008 Elrad OM, Hagan MF. Mechanisms of size control and polymorphism in viral capsid assembly. Nano Letters. 8: 3850-7. PMID 18950240 DOI: 10.1021/Nl802269A  0.794
2008 Hagan MF. Controlling viral capsid assembly with templating Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 77. DOI: 10.1103/PhysRevE.77.051904  0.345
2007 Jack RL, Hagan MF, Chandler D. Fluctuation-dissipation ratios in the dynamics of self-assembly. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 76: 021119. PMID 17930018 DOI: 10.1103/Physreve.76.021119  0.725
2006 Hagan MF, Chandler D. Dynamic pathways for viral capsid assembly. Biophysical Journal. 91: 42-54. PMID 16565055 DOI: 10.1529/Biophysj.105.076851  0.576
2003 Hagan MF, Dinner AR, Chandler D, Chakraborty AK. Atomistic understanding of kinetic pathways for single base-pair binding and unbinding in DNA. Proceedings of the National Academy of Sciences of the United States of America. 100: 13922-7. PMID 14617777 DOI: 10.1073/Pnas.2036378100  0.595
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