Yafang Li, Ph.D. - Publications

Affiliations: 
2011 Statistical Genetics University of Iowa, Iowa City, IA 

46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Li Y, Xiao X, Li J, Han Y, Cheng C, Fernandes GF, Slewitzke SE, Rosenberg SM, Zhu M, Byun J, Bossé Y, McKay JD, Albanes D, Lam S, Tardon A, et al. Lung cancer in ever- and never-smokers: findings from multi-population GWAS studies. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. PMID 38180474 DOI: 10.1158/1055-9965.EPI-23-0613  0.401
2023 Cheng C, Hong W, Li Y, Xiao X, McKay J, Han Y, Byun J, Peng B, Albanes D, Lam S, Tardon A, Chen C, Bojesen SE, Landi MT, Johansson M, ... ... Li Y, et al. Mosaic chromosomal alterations is associated with increased lung cancer risk: insight from the INTEGRAL-ILCCO cohort analysis. Journal of Thoracic Oncology : Official Publication of the International Association For the Study of Lung Cancer. PMID 37150255 DOI: 10.1016/j.jtho.2023.05.001  0.445
2022 Byun J, Han Y, Li Y, Xia J, Long E, Choi J, Xiao X, Zhu M, Zhou W, Sun R, Bossé Y, Song Z, Schwartz A, Lusk C, Rafnar T, et al. Cross-ancestry genome-wide meta-analysis of 61,047 cases and 947,237 controls identifies new susceptibility loci contributing to lung cancer. Nature Genetics. PMID 35915169 DOI: 10.1038/s41588-022-01115-x  0.395
2022 Zhang R, Shen S, Wei Y, Zhu Y, Li Y, Chen J, Guan J, Pan Z, Wang Y, Zhu M, Xie J, Xiao X, Zhu D, Li Y, Albanes D, et al. A large-scale genome-wide gene-gene interaction study of lung cancer susceptibility in Europeans with a trans-ethnic validation in Asians. Journal of Thoracic Oncology : Official Publication of the International Association For the Study of Lung Cancer. PMID 35500836 DOI: 10.1016/j.jtho.2022.04.011  0.41
2022 Li Y, Xiao X, Li J, Byun J, Cheng C, Bossé Y, McKay J, Albanes D, Lam S, Tardon A, Chen C, Bojesen SE, Landi MT, Johansson M, Risch A, et al. Genome-wide interaction analysis identified low-frequency variants with sex disparity in lung cancer risk. Human Molecular Genetics. PMID 35138370 DOI: 10.1093/hmg/ddac030  0.458
2022 Zhang Y, Li Y, Chachad D, Liu B, Godavarthi JD, Williams-Villalobo A, Lasisi L, Xiong S, Matin A. analysis of DND1 and its co-expressed genes in human cancers. Biochemistry and Biophysics Reports. 29: 101206. PMID 35059511 DOI: 10.1016/j.bbrep.2022.101206  0.338
2021 Musolf AM, Simpson CL, Moiz BA, Pikielny CW, Middlebrooks CD, Mandal D, de Andrade M, Cole MD, Gaba C, Yang P, You M, Li Y, Kupert EY, Anderson MW, Schwartz AG, et al. Genetic variation and recurrent haplotypes on chromosome 6q23-25 risk locus in familial lung cancer. Cancer Research. PMID 33853833 DOI: 10.1158/0008-5472.CAN-20-3196  0.426
2021 Liu Y, Xia J, McKay J, Tsavachidis S, Xiao X, Spitz MR, Cheng C, Byun J, Hong W, Li Y, Zhu D, Song Z, Rosenberg SM, Scheurer ME, Kheradmand F, et al. Rare deleterious germline variants and risk of lung cancer. Npj Precision Oncology. 5: 12. PMID 33594163 DOI: 10.1038/s41698-021-00146-7  0.359
2019 Musolf AM, Moiz BA, Sun H, Pikielny CW, Bossé Y, Mandal D, de Andrade M, Gaba C, Yang P, Li Y, You M, Govindan R, Wilson RK, Kupert EY, Anderson MW, et al. Whole Exome Sequencing of Highly Aggregated Lung Cancer Families Reveals Linked Loci for Increased Cancer Risk on Chromosomes 12q, 7p and 4q. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. PMID 31826912 DOI: 10.1158/1055-9965.Epi-19-0887  0.511
2019 Hung RJ, Spitz MR, Houlston RS, Schwartz AG, Field JK, Ying J, Li Y, Han Y, Ji X, Chen W, Wu X, Gorlov IP, Na J, de Andrade M, Liu G, et al. Lung Cancer Risk in Never Smokers of European Descent is Associated with Genetic Variation in the 515.33 TERT-CLPTM1L Region. Journal of Thoracic Oncology : Official Publication of the International Association For the Study of Lung Cancer. PMID 31009812 DOI: 10.1016/J.Jtho.2019.04.008  0.538
2019 Li Y, Xiao X, Bossé Y, Gorlova O, Gorlov I, Han Y, Byun J, Leighl N, Johansen JS, Barnett M, Chen C, Goodman G, Cox A, Taylor F, Woll P, et al. Genetic interaction analysis among oncogenesis-related genes revealed novel genes and networks in lung cancer development. Oncotarget. 10: 1760-1774. PMID 30956756 DOI: 10.18632/Oncotarget.26678  0.513
2019 Musolf A, Sun H, Moiz BA, Pikielny CW, Andrade Md, Mandal D, Gaba C, Yang P, Li Y, You M, Wilson RK, Kupert EY, Anderson MW, Schwartz AG, Pinney SM, et al. Abstract 4176: Familial lung cancer exhibits multiple novel linked haplotypes within pedigrees Cancer Research. 79: 4176-4176. DOI: 10.1158/1538-7445.Sabcs18-4176  0.51
2019 Pikielny CW, Musolf AM, Andrade Md, Mandal D, Gaba C, Yang P, Li y, You M, Wilson R, Kupert EY, Anderson MW, Schwartz AG, Pinney SM, Granizo-Mackenzie AI, Liu Y, et al. Abstract LB-053: Familial studies identify variants in the E2A transcription factor as putative risk factors for lung cancer Cancer Research. 79. DOI: 10.1158/1538-7445.Am2019-Lb-053  0.505
2019 Li Y, Xiao X, Gorlov I, Han Y, Hung R, Amos C. Abstract 1583: Genetic interaction analysis among oncogenesis-related genes revealed novel genes and networks in lung cancer development Cancer Research. 79: 1583-1583. DOI: 10.1158/1538-7445.Am2019-1583  0.526
2019 Li Y, Xiao X, Bossé Y, Han Y, Amos C. MA10.07 Integrative Analysis of Epistasis Involving Oncogenesis-Related Genes in Lung Cancer Risk Development Journal of Thoracic Oncology. 14. DOI: 10.1016/J.Jtho.2019.08.579  0.479
2018 Ferreiro-Iglesias A, Lesseur C, McKay J, Hung RJ, Han Y, Zong X, Christiani D, Johansson M, Xiao X, Li Y, Qian DC, Ji X, Liu G, Caporaso N, Scelo G, et al. Fine mapping of MHC region in lung cancer highlights independent susceptibility loci by ethnicity. Nature Communications. 9: 3927. PMID 30254314 DOI: 10.1038/S41467-018-05890-2  0.473
2018 Ji X, Bossé Y, Landi MT, Gui J, Xiao X, Qian D, Joubert P, Lamontagne M, Li Y, Gorlov I, de Biasi M, Han Y, Gorlova O, Hung RJ, Wu X, et al. Identification of susceptibility pathways for the role of chromosome 15q25.1 in modifying lung cancer risk. Nature Communications. 9: 3221. PMID 30104567 DOI: 10.1038/S41467-018-05074-Y  0.526
2018 Byun J, Schwartz AG, Lusk C, Wenzlaff AS, de Andrade M, Mandal D, Gaba C, Yang P, You M, Kupert EY, Anderson MW, Han Y, Li Y, Qian D, Stilp A, et al. Genome-Wide Association Study of Familial Lung Cancer. Carcinogenesis. PMID 29924316 DOI: 10.1093/Carcin/Bgy080  0.544
2018 Gorlova OY, Li Y, Gorlov I, Ying J, Chen WV, Assassi S, Reveille JD, Arnett FC, Zhou X, Bossini-Castillo L, Lopez-Isac E, Acosta-Herrera M, Gregersen PK, Lee AT, Steen VD, et al. Gene-level association analysis of systemic sclerosis: A comparison of African-Americans and White populations. Plos One. 13: e0189498. PMID 29293537 DOI: 10.1371/Journal.Pone.0189498  0.338
2017 Li Y, Xiao X, Han Y, Gorlova O, Qian D, Leighl N, Johansen JS, Barnett M, Chen C, Goodman G, Cox A, Taylor F, Woll P, Wichmann HE, Manz J, et al. Genome-wide interaction study of smoking behavior and non-small cell lung cancer risk in Caucasian population. Carcinogenesis. PMID 29059373 DOI: 10.1093/Carcin/Bgx113  0.518
2017 Musolf AM, Simpson CL, de Andrade M, Mandal D, Gaba C, Yang P, Li Y, You M, Kupert EY, Anderson MW, Schwartz AG, Pinney SM, Amos CI, Bailey-Wilson JE. Parametric Linkage Analysis Identifies Five Novel Genome-Wide Significant Loci for Familial Lung Cancer. Human Heredity. 82: 64-74. PMID 28817824 DOI: 10.1159/000479028  0.55
2017 McKay JD, Hung RJ, Han Y, Zong X, Carreras-Torres R, Christiani DC, Caporaso NE, Johansson M, Xiao X, Li Y, Byun J, Dunning A, Pooley KA, Qian DC, Ji X, et al. Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes. Nature Genetics. PMID 28604730 DOI: 10.1038/Ng.3892  0.542
2017 Cai G, Xiao F, Cheng C, Li Y, Amos CI, Whitfield ML. Population effect model identifies gene expression predictors of survival outcomes in lung adenocarcinoma for both Caucasian and Asian patients. Plos One. 12: e0175850. PMID 28426704 DOI: 10.1371/Journal.Pone.0175850  0.385
2017 Musolf AM, Simpson CL, de Andrade M, Mandal D, Gaba C, Yang P, Li Y, You M, Kupert EY, Anderson MW, Schwartz AG, Pinney SM, Amos CI, Bailey-Wilson JE. Familial Lung Cancer: A Brief History from the Earliest Work to the Most Recent Studies. Genes. 8. PMID 28106732 DOI: 10.3390/Genes8010036  0.556
2017 Murthy R, Song J, Raghavendra A, Li Y, Hsu L, Barcenas C, Tripathy D, Berry D, Hortobagyi G. Abstract P6-09-35: Proposal for a new breast cancer staging classification: Incorporating clinical and biologic factors Cancer Research. 77. DOI: 10.1158/1538-7445.Sabcs16-P6-09-35  0.34
2017 Musolf AM, Simpson CL, Moiz BA, Middlebrooks C, Andrade Md, Mandal D, Gaba C, Yang P, Li Y, You M, Kupert EY, Anderson MW, Schwartz AG, Pinney SM, Amos CI, et al. Abstract 4290: A study in locus heterogeneity: Targeted sequencing analysis of 6q reveals multiple significant loci as the source of a previous linkage peak in familial lung cancer Epidemiology. 77: 4290-4290. DOI: 10.1158/1538-7445.Am2017-4290  0.459
2016 Amos CI, Dennis J, Wang Z, Byun J, Schumacher FR, Gayther SA, Casey G, Hunter DJ, Sellers TA, Gruber SB, Dunning AM, Michailidou K, Fachal L, Doheny K, Spurdle AB, ... Li Y, et al. The OncoArray Consortium: a Network for Understanding the Genetic Architecture of Common Cancers. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. PMID 27697780 DOI: 10.1158/1055-9965.Epi-16-0106  0.442
2016 Zheng Z, Bu W, Tian L, Fan C, Gao X, Zhang X, Yu C, Wang H, Liao Y, Li Y, Lewis M, Edwards D, Zwaka T, Hilsenbeck S, Medina D, et al. Abstract P2-06-11: Wild type N-Ras, overexpressed in basal-like breast cancer, promotes tumor formation by inducing IL8 secretion via JAK2 activation Cancer Research. 75: 2139-2139. DOI: 10.1158/1538-7445.Sabcs15-P2-06-11  0.307
2016 Xu Y, Feng Z, Mo Q, Qin L, Sun T, Wu H, Li Y, Liao L, Xu J. Abstract P2-05-23: TWIST1 silences FOXA1 transcription to promote breast cancer progression Cancer Research. 76. DOI: 10.1158/1538-7445.Sabcs15-P2-05-23  0.366
2016 Qin L, Xu Y, Wu Y, Yu X, Toneff M, Liao L, Li Y, Xu J. Abstract P2-04-01: The role of Jmjd1a in mammary gland development and breast tumor growth Cancer Research. 76. DOI: 10.1158/1538-7445.Sabcs15-P2-04-01  0.309
2016 Mckay JD, Li Y, Han Y, Xioa X, Field J, Zong X, Bickeböller H, Christiani DC, Brennan P, Landi M, Hung R, Amos CI. Abstract 2569: A genome wide association study of lung cancer identifies 11 novel susceptibility loci Cancer Research. 76: 2569-2569. DOI: 10.1158/1538-7445.Am2016-2569  0.553
2015 Kachuri L, Amos CI, McKay JD, Johansson M, Vineis P, Bueno-de-Mesquita HB, Boutron-Ruault MC, Johansson M, Quirós JR, Sieri S, Travis RC, Weiderpass E, Le Marchand L, Henderson BE, Wilkens L, ... ... Li Y, et al. Fine-mapping of chromosome 5p15.33 based on a targeted deep sequencing and high density genotyping identifies novel lung cancer susceptibility loci. Carcinogenesis. PMID 26590902 DOI: 10.1093/Carcin/Bgv165  0.462
2015 Cordell HJ, Han Y, Mells GF, Li Y, Hirschfield GM, Greene CS, Xie G, Juran BD, Zhu D, Qian DC, Floyd JA, Morley KI, Prati D, Lleo A, Cusi D, et al. International genome-wide meta-analysis identifies new primary biliary cirrhosis risk loci and targetable pathogenic pathways. Nature Communications. 6: 8019. PMID 26394269 DOI: 10.1038/Ncomms9019  0.331
2015 Brenner DR, Amos CI, Brhane Y, Timofeeva MN, Caporaso N, Wang Y, Christiani DC, Bickeböller H, Yang P, Albanes D, Stevens VL, Gapstur S, McKay J, Boffetta P, Zaridze D, ... ... Li Y, et al. Identification of lung cancer histology-specific variants applying Bayesian framework variant prioritization approaches within the TRICL and ILCCO consortia. Carcinogenesis. PMID 26363033 DOI: 10.1093/Carcin/Bgv128  0.465
2015 Ji X, Gui J, Han Y, Brennan P, Li Y, McKay J, Caporaso NE, Bertazzi PA, Landi MT, Amos CI. The role of haplotype in 15q25.1 locus in lung cancer risk: results of scanning chromosome 15. Carcinogenesis. 36: 1275-83. PMID 26282330 DOI: 10.1093/Carcin/Bgv118  0.482
2015 Li Y, Xiao X, Ji X, Liu B, Amos CI. RNA-seq analysis of lung adenocarcinomas reveals different gene expression profiles between smoking and nonsmoking patients. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. PMID 26081616 DOI: 10.1007/S13277-015-3576-Y  0.397
2015 Wang Y, Wei Y, Gaborieau V, Shi J, Han Y, Timofeeva MN, Su L, Li Y, Eisen T, Amos CI, Landi MT, Christiani DC, McKay JD, Houlston RS. Deciphering associations for lung cancer risk through imputation and analysis of 12 316 cases and 16 831 controls. European Journal of Human Genetics : Ejhg. PMID 25804397 DOI: 10.1038/Ejhg.2015.48  0.522
2015 Poirier JG, Brennan P, McKay JD, Spitz MR, Bickeböller H, Risch A, Liu G, Le Marchand L, Tworoger S, McLaughlin J, Rosenberger A, Heinrich J, Brüske I, Muley T, Henderson BE, ... ... Li Y, et al. Informed genome-wide association analysis with family history as a secondary phenotype identifies novel loci of lung cancer. Genetic Epidemiology. 39: 197-206. PMID 25644374 DOI: 10.1002/Gepi.21882  0.55
2015 Xiong D, Wang Y, Kupert E, Simpson C, Pinney SM, Gaba CR, Mandal D, Schwartz AG, Yang P, de Andrade M, Pikielny C, Byun J, Li Y, Stambolian D, Spitz MR, et al. A recurrent mutation in PARK2 is associated with familial lung cancer. American Journal of Human Genetics. 96: 301-8. PMID 25640678 DOI: 10.1016/J.Ajhg.2014.12.016  0.479
2015 Liu Y, Kheradmand F, Scheurer M, Davis C, Wheeler D, Silverman E, Sanjay S, Tsavachidis S, Armstrong G, Kupert E, Anderson M, Li Y, Pikielny C, Bailey-Wilson JE, You M, et al. Abstract 4600: Target exome sequencing for disease-causing rare mutations in familial and sporadic lung cancer Cancer Research. 75: 4600-4600. DOI: 10.1158/1538-7445.Am2015-4600  0.458
2014 Ji X, Zhang W, Gui J, Fan X, Zhang W, Li Y, An G, Zhu D, Hu Q. Role of a genetic variant on the 15q25.1 lung cancer susceptibility locus in smoking-associated nasopharyngeal carcinoma. Plos One. 9: e109036. PMID 25329654 DOI: 10.1371/Journal.Pone.0109036  0.49
2012 Li Y, Huang J, Amos CI. Genetic association analysis of complex diseases incorporating intermediate phenotype information. Plos One. 7: e46612. PMID 23094028 DOI: 10.1371/Journal.Pone.0046612  0.522
2012 Juran BD, Hirschfield GM, Invernizzi P, Atkinson EJ, Li Y, Xie G, Kosoy R, Ransom M, Sun Y, Bianchi I, Schlicht EM, Lleo A, Coltescu C, Bernuzzi F, Podda M, et al. Immunochip analyses identify a novel risk locus for primary biliary cirrhosis at 13q14, multiple independent associations at four established risk loci and epistasis between 1p31 and 7q32 risk variants. Human Molecular Genetics. 21: 5209-21. PMID 22936693 DOI: 10.1093/Hmg/Dds359  0.399
2010 Fang S, Pinney SM, Bailey-Wilson JE, de Andrade MA, Li Y, Kupert E, You M, Schwartz AG, Yang P, Anderson MW, Amos CI. Ordered subset analysis identifies loci influencing lung cancer risk on chromosomes 6q and 12q. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 19: 3157-66. PMID 21030603 DOI: 10.1158/1055-9965.Epi-10-0792  0.487
2010 Amos CI, Pinney SM, Li Y, Kupert E, Lee J, de Andrade MA, Yang P, Schwartz AG, Fain PR, Gazdar A, Minna J, Wiest JS, Zeng D, Rothschild H, Mandal D, et al. A susceptibility locus on chromosome 6q greatly increases lung cancer risk among light and never smokers. Cancer Research. 70: 2359-67. PMID 20215501 DOI: 10.1158/0008-5472.Can-09-3096  0.47
2009 Landua J, Moraes R, Li Y, Lewis M. Constitutive Activation of Smoothened (SMO) Enhances MMTV-c-ErbB2-Induced, but Not MMTV-Wnt1-Induced, Mammary Tumorigenesis. Cancer Research. 69: 3152-3152. DOI: 10.1158/0008-5472.Sabcs-09-3152  0.341
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