| Year |
Citation |
Score |
| 2024 |
Goldberg CB, Adams L, Blumenthal D, Brennan PF, Brown N, Butte AJ, Cheatham M, deBronkart D, Dixon J, Drazen J, Evans BJ, Hoffman SM, Holmes C, Lee P, Manrai AK, ... ... Kohane IS, et al. To do no harm - and the most good - with AI in health care. Nature Medicine. PMID 38388841 DOI: 10.1038/s41591-024-02853-7 |
0.38 |
|
| 2021 |
Zhang HG, Hejblum BP, Weber GM, Palmer NP, Churchill SE, Szolovits P, Murphy SN, Liao KP, Kohane IS, Cai T. ATLAS: an automated association test using probabilistically linked health records with application to genetic studies. Journal of the American Medical Informatics Association : Jamia. PMID 34608931 DOI: 10.1093/jamia/ocab187 |
0.57 |
|
| 2020 |
Madhavan S, Bastarache L, Brown JS, Butte AJ, Dorr DA, Embi PJ, Friedman CP, Johnson KB, Moore JH, Kohane IS, Payne PRO, Tenenbaum JD, Weiner MG, Wilcox AB, Ohno-Machado L. Use of electronic health records to support a public health response to the COVID-19 pandemic in the United States: a perspective from 15 academic medical centers. Journal of the American Medical Informatics Association : Jamia. PMID 33260207 DOI: 10.1093/jamia/ocaa287 |
0.459 |
|
| 2020 |
Norgeot B, Quer G, Beaulieu-Jones BK, Torkamani A, Dias R, Gianfrancesco M, Arnaout R, Kohane IS, Saria S, Topol E, Obermeyer Z, Yu B, Butte AJ. Minimum information about clinical artificial intelligence modeling: the MI-CLAIM checklist. Nature Medicine. 26: 1320-1324. PMID 32908275 DOI: 10.1038/S41591-020-1041-Y |
0.423 |
|
| 2020 |
Luo Y, Eran A, Palmer N, Avillach P, Levy-Moonshine A, Szolovits P, Kohane IS. A multidimensional precision medicine approach identifies an autism subtype characterized by dyslipidemia. Nature Medicine. PMID 32778826 DOI: 10.1038/S41591-020-1007-0 |
0.573 |
|
| 2020 |
Sáez C, Gutiérrez-Sacristán A, Kohane I, García-Gómez JM, Avillach P. EHRtemporalVariability: delineating temporal data-set shifts in electronic health records. Gigascience. 9. PMID 32729900 DOI: 10.1093/Gigascience/Giaa079 |
0.31 |
|
| 2019 |
Zhang Y, Cai T, Yu S, Cho K, Hong C, Sun J, Huang J, Ho YL, Ananthakrishnan AN, Xia Z, Shaw SY, Gainer V, Castro V, Link N, Honerlaw J, ... ... Kohane I, et al. High-throughput phenotyping with electronic medical record data using a common semi-supervised approach (PheCAP). Nature Protocols. PMID 31748751 DOI: 10.1038/S41596-019-0227-6 |
0.626 |
|
| 2019 |
Liao KP, Sun J, Cai TA, Link N, Hong C, Huang J, Huffman JE, Gronsbell J, Zhang Y, Ho YL, Castro V, Gainer V, Murphy SN, O'Donnell CJ, Gaziano JM, ... ... Kohane IS, et al. High-throughput multimodal automated phenotyping (MAP) with application to PheWAS. Journal of the American Medical Informatics Association : Jamia. 26: 1255-1262. PMID 31613361 DOI: 10.1093/Jamia/Ocz066 |
0.562 |
|
| 2019 |
Kohane I, Berg JM. Donald A. B. Lindberg (1933-2019). Science (New York, N.Y.). 366: 37. PMID 31604294 DOI: 10.1126/Science.Aaz3644 |
0.32 |
|
| 2019 |
Ananthakrishnan AN, Cagan A, Cai T, Gainer VS, Savova G, Shaw SY, Churchill S, Burke KE, Karlson EW, Murphy SN, Kohane I, Liao KP, Xavier RJ. Use of narrative concepts in the EHR to validate genetic determinants of treatment response in a virtual inflammatory bowel disease cohort. Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association. PMID 31404664 DOI: 10.1016/J.Cgh.2019.08.005 |
0.353 |
|
| 2019 |
McDermott M, Wang J, Zhao WN, Sheridan SD, Szolovits P, Kohane I, Haggarty SJ, Perlis RH. Deep Learning Benchmarks on L1000 Gene Expression Data. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 30990190 DOI: 10.1109/Tcbb.2019.2910061 |
0.566 |
|
| 2019 |
Hejblum BP, Weber GM, Liao KP, Palmer NP, Churchill S, Shadick NA, Szolovits P, Murphy SN, Kohane IS, Cai T. Probabilistic record linkage of de-identified research datasets with discrepancies using diagnosis codes. Scientific Data. 6: 180298. PMID 30620344 DOI: 10.1038/Sdata.2018.298 |
0.563 |
|
| 2017 |
Yu S, Ma Y, Gronsbell J, Cai T, Ananthakrishnan AN, Gainer VS, Churchill SE, Szolovits P, Murphy SN, Kohane IS, Liao KP, Cai T. Enabling phenotypic big data with PheNorm. Journal of the American Medical Informatics Association : Jamia. PMID 29126253 DOI: 10.1093/Jamia/Ocx111 |
0.561 |
|
| 2017 |
Kothari C, Wack M, Hassen-Khodja C, Finan S, Savova G, O'Boyle M, Bliss G, Cornell A, Horn EJ, Davis R, Jacobs J, Kohane I, Avillach P. Phelan-McDermid syndrome data network: Integrating patient reported outcomes with clinical notes and curated genetic reports. American Journal of Medical Genetics. Part B, Neuropsychiatric Genetics : the Official Publication of the International Society of Psychiatric Genetics. PMID 28862395 DOI: 10.1002/Ajmg.B.32579 |
0.318 |
|
| 2016 |
Yu S, Chakrabortty A, Liao KP, Cai T, Ananthakrishnan AN, Gainer VS, Churchill SE, Szolovits P, Murphy SN, Kohane IS, Cai T. Surrogate-assisted feature extraction for high-throughput phenotyping. Journal of the American Medical Informatics Association : Jamia. PMID 27632993 DOI: 10.1093/Jamia/Ocw135 |
0.561 |
|
| 2016 |
Manrai AK, Funke BH, Rehm HL, Olesen MS, Maron BA, Szolovits P, Margulies DM, Loscalzo J, Kohane IS. Genetic Misdiagnoses and the Potential for Health Disparities. The New England Journal of Medicine. 375: 655-65. PMID 27532831 DOI: 10.1056/Nejmsa1507092 |
0.545 |
|
| 2016 |
Ananthakrishnan AN, Cagan A, Cai T, Gainer VS, Shaw SY, Savova G, Churchill S, Karlson EW, Kohane I, Liao KP, Murphy SN. Comparative Effectiveness of Infliximab and Adalimumab in Crohn's Disease and Ulcerative Colitis. Inflammatory Bowel Diseases. PMID 26933751 DOI: 10.1097/Mib.0000000000000754 |
0.316 |
|
| 2016 |
Ananthakrishnan AN, Cagan A, Cai T, Gainer VS, Shaw SY, Churchill S, Karlson EW, Murphy SN, Liao KP, Kohane I. Statin use is Associated With Reduced Risk of Colorectal Cancer in Patients with Inflammatory Bowel Diseases. Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association. PMID 26905907 DOI: 10.1016/J.Cgh.2016.02.017 |
0.36 |
|
| 2016 |
Ananthakrishnan AN, Cagan A, Cai T, Gainer VS, Shaw S, Churchill S, Karlson E, Murphy S, Liao K, Kohane I. 1122 Statin Use Is Associated With Reduced Risk of Colorectal Cancer in Inflammatory Bowel Diseases Gastroenterology. 150: S225-S226. DOI: 10.1016/S0016-5085(16)30831-9 |
0.301 |
|
| 2015 |
Ananthakrishnan AN, Cagan A, Cai T, Gainer VS, Shaw SY, Savova G, Churchill S, Karlson EW, Murphy SN, Liao KP, Kohane I. Identification of Nonresponse to Treatment Using Narrative Data in an Electronic Health Record Inflammatory Bowel Disease Cohort. Inflammatory Bowel Diseases. PMID 26332313 DOI: 10.1097/Mib.0000000000000580 |
0.352 |
|
| 2015 |
Liao KP, Ananthakrishnan AN, Kumar V, Xia Z, Cagan A, Gainer VS, Goryachev S, Chen P, Savova GK, Agniel D, Churchill S, Lee J, Murphy SN, Plenge RM, Szolovits P, ... Kohane I, et al. Methods to Develop an Electronic Medical Record Phenotype Algorithm to Compare the Risk of Coronary Artery Disease across 3 Chronic Disease Cohorts. Plos One. 10: e0136651. PMID 26301417 DOI: 10.1371/Journal.Pone.0136651 |
0.61 |
|
| 2015 |
Ananthakrishnan AN, Cagan A, Cai T, Gainer VS, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP, Xavier RJ. Common Genetic Variants Influence Circulating Vitamin D Levels in Inflammatory Bowel Diseases. Inflammatory Bowel Diseases. PMID 26241000 DOI: 10.1097/Mib.0000000000000524 |
0.318 |
|
| 2015 |
Doshi-Velez F, Avillach P, Palmer N, Bousvaros A, Ge Y, Fox K, Steinberg G, Spettell C, Juster I, Kohane I. Prevalence of Inflammatory Bowel Disease Among Patients with Autism Spectrum Disorders. Inflammatory Bowel Diseases. 21: 2281-8. PMID 26218138 DOI: 10.1097/Mib.0000000000000502 |
0.307 |
|
| 2015 |
Yu S, Liao KP, Shaw SY, Gainer VS, Churchill SE, Szolovits P, Murphy SN, Kohane IS, Cai T. Toward high-throughput phenotyping: unbiased automated feature extraction and selection from knowledge sources. Journal of the American Medical Informatics Association : Jamia. PMID 25929596 DOI: 10.1093/Jamia/Ocv034 |
0.488 |
|
| 2015 |
Liao KP, Cai T, Savova GK, Murphy SN, Karlson EW, Ananthakrishnan AN, Gainer VS, Shaw SY, Xia Z, Szolovits P, Churchill S, Kohane I. Development of phenotype algorithms using electronic medical records and incorporating natural language processing. Bmj (Clinical Research Ed.). 350: h1885. PMID 25911572 DOI: 10.1136/Bmj.H1885 |
0.599 |
|
| 2015 |
Diogo D, Bastarache L, Liao KP, Graham RR, Fulton RS, Greenberg JD, Eyre S, Bowes J, Cui J, Lee A, Pappas DA, Kremer JM, Barton A, Coenen MJ, Franke B, ... ... Kohane I, et al. TYK2 protein-coding variants protect against rheumatoid arthritis and autoimmunity, with no evidence of major pleiotropic effects on non-autoimmune complex traits. Plos One. 10: e0122271. PMID 25849893 DOI: 10.1371/Journal.Pone.0122271 |
0.305 |
|
| 2015 |
Ananthakrishnan AN, Cagan A, Cai T, Gainer VS, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Colonoscopy is associated with a reduced risk for colon cancer and mortality in patients with inflammatory bowel diseases. Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association. 13: 322-329.e1. PMID 25041865 DOI: 10.1016/J.Cgh.2014.07.018 |
0.326 |
|
| 2014 |
Sinnott JA, Dai W, Liao KP, Shaw SY, Ananthakrishnan AN, Gainer VS, Karlson EW, Churchill S, Szolovits P, Murphy S, Kohane I, Plenge R, Cai T. Improving the power of genetic association tests with imperfect phenotype derived from electronic medical records. Human Genetics. 133: 1369-82. PMID 25062868 DOI: 10.1007/S00439-014-1466-9 |
0.617 |
|
| 2014 |
Brownstein CA, Beggs AH, Homer N, Merriman B, Yu TW, Flannery KC, DeChene ET, Towne MC, Savage SK, Price EN, Holm IA, Luquette LJ, Lyon E, Majzoub J, Neupert P, ... ... Kohane IS, et al. An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge. Genome Biology. 15: R53. PMID 24667040 DOI: 10.1186/Gb-2014-15-3-R53 |
0.555 |
|
| 2014 |
Ananthakrishnan AN, Cagan A, Gainer VS, Cheng SC, Cai T, Szolovits P, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Higher plasma vitamin D is associated with reduced risk of Clostridium difficile infection in patients with inflammatory bowel diseases. Alimentary Pharmacology & Therapeutics. 39: 1136-42. PMID 24641590 DOI: 10.1111/Apt.12706 |
0.584 |
|
| 2014 |
Ananthakrishnan AN, Cagan A, Gainer VS, Cheng SC, Cai T, Scoville E, Konijeti GG, Szolovits P, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Thromboprophylaxis is associated with reduced post-hospitalization venous thromboembolic events in patients with inflammatory bowel diseases. Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association. 12: 1905-10. PMID 24632349 DOI: 10.1016/J.Cgh.2014.02.034 |
0.576 |
|
| 2014 |
Ananthakrishnan AN, Cagan A, Gainer VS, Cheng SC, Cai T, Szolovits P, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Mortality and extraintestinal cancers in patients with primary sclerosing cholangitis and inflammatory bowel disease. Journal of Crohn's & Colitis. 8: 956-63. PMID 24559536 DOI: 10.1016/J.Crohns.2014.01.019 |
0.587 |
|
| 2014 |
Ananthakrishnan AN, Cheng SC, Cai T, Cagan A, Gainer VS, Szolovits P, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Serum inflammatory markers and risk of colorectal cancer in patients with inflammatory bowel diseases. Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association. 12: 1342-8.e1. PMID 24407106 DOI: 10.1016/J.Cgh.2013.12.030 |
0.602 |
|
| 2014 |
Ananthakrishnan AN, Cheng SC, Cai T, Cagan A, Gainer VS, Szolovits P, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Association between reduced plasma 25-hydroxy vitamin D and increased risk of cancer in patients with inflammatory bowel diseases. Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association. 12: 821-7. PMID 24161349 DOI: 10.1016/J.Cgh.2013.10.011 |
0.586 |
|
| 2014 |
Liao KP, Diogo D, Cui J, Cai T, Okada Y, Gainer VS, Murphy SN, Gupta N, Mirel D, Ananthakrishnan AN, Szolovits P, Shaw SY, Raychaudhuri S, Churchill S, Kohane I, et al. Association between low density lipoprotein and rheumatoid arthritis genetic factors with low density lipoprotein levels in rheumatoid arthritis and non-rheumatoid arthritis controls. Annals of the Rheumatic Diseases. 73: 1170-5. PMID 23716066 DOI: 10.1136/Annrheumdis-2012-203202 |
0.549 |
|
| 2014 |
Ananthakrishnan A, Cagan A, Cai T, Gainer V, Shaw S, Churchill S, Karlsin E, Murphy S, Kohane I, Liao K. Colonoscopy Is Associated With a Reduced Risk of Colon Cancer and Mortality in Patients With Inflammatory Bowel Diseases: ACG Auxiliary Award - Member: 2202 The American Journal of Gastroenterology. 109. DOI: 10.14309/00000434-201410002-02202 |
0.315 |
|
| 2014 |
Kumar V, Liao K, Cheng S, Yu S, Kartoun U, Brettman A, Gainer V, Cagan A, Murphy S, Savova G, Chen P, Szolovits P, Xia Z, Karlson E, Plenge R, ... ... Kohane I, et al. NATURAL LANGUAGE PROCESSING IMPROVES PHENOTYPIC ACCURACY IN AN ELECTRONIC MEDICAL RECORD COHORT OF TYPE 2 DIABETES AND CARDIOVASCULAR DISEASE Journal of the American College of Cardiology. 63: A1359. DOI: 10.1016/S0735-1097(14)61359-0 |
0.603 |
|
| 2014 |
Ananthakrishnan AN, Cagan A, Cheng S, Gainer VS, Cai T, Shaw S, Szolovits P, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. 302 Extraintestinal Cancers and Mortality in Patients With Primary Sclerosing Cholangitis and Inflammatory Bowel Disease Gastroenterology. 146: S-906. DOI: 10.1016/S0016-5085(14)63293-5 |
0.577 |
|
| 2014 |
Ananthakrishnan AN, Cagan A, Gainer VS, Cheng S, Cai T, Shaw S, Szolovits P, Karlson EW, Churchill S, Murphy SN, Kohane I, Liao KP. Mo1263 Higher Plasma Vitamin D is Associated With Reduced Risk of Clostridium difficile Infection in Patients With Inflammatory Bowel Disease Gastroenterology. 146: S-601. DOI: 10.1016/S0016-5085(14)62178-8 |
0.583 |
|
| 2014 |
Ananthakrishnan AN, Cagan A, Gainer VS, Cheng S, Cai T, Shaw S, Scoville E, Konijeti GG, Szolovits P, Karlson EW, Churchill S, Murphy SN, Kohane I, Liao KP. Mo1262 Pharmacologic Thromboprophylaxis Reduces Post-Hospitalization Venous Thromboembolic Events in Patients With Inflammatory Bowel Disease Gastroenterology. 146: S-600-S-601. DOI: 10.1016/S0016-5085(14)62177-6 |
0.583 |
|
| 2014 |
Ananthakrishnan AN, Cheng S, Cai T, Cagan A, Gainer VS, Szolovits P, Shaw S, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Su1324 Serum Inflammatory Markers and Risk of Colorectal Cancer in Patients With Inflammatory Bowel Disease Gastroenterology. 146. DOI: 10.1016/S0016-5085(14)61569-9 |
0.583 |
|
| 2013 |
Xia Z, Secor E, Chibnik LB, Bove RM, Cheng S, Chitnis T, Cagan A, Gainer VS, Chen PJ, Liao KP, Shaw SY, Ananthakrishnan AN, Szolovits P, Weiner HL, Karlson EW, ... ... Kohane IS, et al. Modeling disease severity in multiple sclerosis using electronic health records. Plos One. 8: e78927. PMID 24244385 DOI: 10.1371/Journal.Pone.0078927 |
0.565 |
|
| 2013 |
Manrai AK, Kohane IS, Szolovits P. Urinary-cell mRNA and acute kidney-transplant rejection. The New England Journal of Medicine. 369: 1859. PMID 24195557 DOI: 10.1056/NEJMc1310006#SA3 |
0.461 |
|
| 2013 |
Overby CL, Kohane I, Kannry JL, Williams MS, Starren J, Bottinger E, Gottesman O, Denny JC, Weng C, Tarczy-Hornoch P, Hripcsak G. Opportunities for genomic clinical decision support interventions. Genetics in Medicine : Official Journal of the American College of Medical Genetics. 15: 817-23. PMID 24051479 DOI: 10.1038/Gim.2013.128 |
0.318 |
|
| 2013 |
Ananthakrishnan AN, Cagan A, Gainer VS, Cai T, Cheng SC, Savova G, Chen P, Szolovits P, Xia Z, De Jager PL, Shaw SY, Churchill S, Karlson EW, Kohane I, Plenge RM, et al. Normalization of plasma 25-hydroxy vitamin D is associated with reduced risk of surgery in Crohn's disease. Inflammatory Bowel Diseases. 19: 1921-7. PMID 23751398 DOI: 10.1097/Mib.0B013E3182902Ad9 |
0.579 |
|
| 2013 |
Gottesman O, Kuivaniemi H, Tromp G, Faucett WA, Li R, Manolio TA, Sanderson SC, Kannry J, Zinberg R, Basford MA, Brilliant M, Carey DJ, Chisholm RL, Chute CG, Connolly JJ, ... ... Kohane I, et al. The Electronic Medical Records and Genomics (eMERGE) Network: past, present, and future. Genetics in Medicine : Official Journal of the American College of Medical Genetics. 15: 761-71. PMID 23743551 DOI: 10.1038/Gim.2013.72 |
0.303 |
|
| 2013 |
Ananthakrishnan AN, Cai T, Savova G, Cheng SC, Chen P, Perez RG, Gainer VS, Murphy SN, Szolovits P, Xia Z, Shaw S, Churchill S, Karlson EW, Kohane I, Plenge RM, et al. Improving case definition of Crohn's disease and ulcerative colitis in electronic medical records using natural language processing: a novel informatics approach. Inflammatory Bowel Diseases. 19: 1411-20. PMID 23567779 DOI: 10.1097/Mib.0B013E31828133Fd |
0.616 |
|
| 2013 |
Ananthakrishnan AN, Gainer VS, Cai T, Perez RG, Cheng SC, Savova G, Chen P, Szolovits P, Xia Z, De Jager PL, Shaw S, Churchill S, Karlson EW, Kohane I, Perlis RH, et al. Similar risk of depression and anxiety following surgery or hospitalization for Crohn's disease and ulcerative colitis. The American Journal of Gastroenterology. 108: 594-601. PMID 23337479 DOI: 10.1038/Ajg.2012.471 |
0.573 |
|
| 2013 |
Ananthakrishnan AN, Gainer VS, Perez RG, Cai T, Cheng SC, Savova G, Chen P, Szolovits P, Xia Z, De Jager PL, Shaw SY, Churchill S, Karlson EW, Kohane I, Perlis RH, et al. Psychiatric co-morbidity is associated with increased risk of surgery in Crohn's disease. Alimentary Pharmacology & Therapeutics. 37: 445-54. PMID 23289600 DOI: 10.1111/Apt.12195 |
0.586 |
|
| 2013 |
Liao KP, Kurreeman F, Li G, Duclos G, Murphy S, Guzman R, Cai T, Gupta N, Gainer V, Schur P, Cui J, Denny JC, Szolovits P, Churchill S, Kohane I, et al. Associations of autoantibodies, autoimmune risk alleles, and clinical diagnoses from the electronic medical records in rheumatoid arthritis cases and non-rheumatoid arthritis controls. Arthritis and Rheumatism. 65: 571-81. PMID 23233247 DOI: 10.1002/Art.37801 |
0.573 |
|
| 2013 |
Ananthakrishnan AN, Gainer VS, Cai T, Cheng S, Savova G, Chen P, Szolovits P, Xia Z, De Jager PL, Shaw S, Churchill S, Karlson EW, Kohane I, Perlis R, Plenge RM, et al. 221 Psychiatric Co-Morbidity Is Associated With Increased Risk of Surgery in Crohns Disease Gastroenterology. 144: S-48. DOI: 10.1016/S0016-5085(13)60167-5 |
0.574 |
|
| 2013 |
Ananthakrishnan AN, Cagan A, Gainer VS, Cai T, Churchill S, Karlson EW, Kohane I, Plenge RM, Liao KP, Murphy SN. 1 Normalization of Vitamin D Status is Associated with Reduced Risk of Surgery and Hospitalization in Inflammatory Bowel Disease: A Prospective Study Gastroenterology. 144: S-1. DOI: 10.1016/S0016-5085(13)60001-3 |
0.302 |
|
| 2012 |
Biesecker LG, Burke W, Kohane I, Plon SE, Zimmern R. Next-generation sequencing in the clinic: are we ready? Nature Reviews. Genetics. 13: 818-24. PMID 23076269 DOI: 10.1038/Nrg3357 |
0.308 |
|
| 2012 |
Schmid PR, Palmer NP, Kohane IS, Berger B. Making sense out of massive data by going beyond differential expression. Proceedings of the National Academy of Sciences of the United States of America. 109: 5594-9. PMID 22447773 DOI: 10.1073/Pnas.1118792109 |
0.308 |
|
| 2012 |
Ananthakrishnan AN, Guzman-Perez R, Gainer V, Cai T, Churchill S, Kohane I, Plenge RM, Murphy S. Predictors of severe outcomes associated with Clostridium difficile infection in patients with inflammatory bowel disease Alimentary Pharmacology & Therapeutics. 35: 789-795. PMID 22360370 DOI: 10.1111/J.1365-2036.2012.05022.X |
0.304 |
|
| 2011 |
Kohane IS, Szolovits P. Marco Ramoni: an appreciation of academic achievement. Journal of the American Medical Informatics Association : Jamia. 18: 367-9. PMID 21474623 DOI: 10.1136/Amiajnl-2011-000218 |
0.546 |
|
| 2011 |
Kurreeman F, Liao K, Chibnik L, Hickey B, Stahl E, Gainer V, Li G, Bry L, Mahan S, Ardlie K, Thomson B, Szolovits P, Churchill S, Murphy SN, Cai T, ... ... Kohane I, et al. Genetic basis of autoantibody positive and negative rheumatoid arthritis risk in a multi-ethnic cohort derived from electronic health records. American Journal of Human Genetics. 88: 57-69. PMID 21211616 DOI: 10.1016/J.Ajhg.2010.12.007 |
0.608 |
|
| 2011 |
Glass A, Taube S, McMurry A, Eddy C, Chance PL, McShane L, Polley M, Kohane I. C-C4-02: Using a Natural Language Processor to Remove All Elements of Personal Health Information (PHI) to Deidentify Clinical Annotations for the Specimen Retrieval System (SRS) Clinical Medicine & Research. 9: 170-170. DOI: 10.3121/Cmr.2011.1020.C-C4-02 |
0.343 |
|
| 2010 |
Liao KP, Cai T, Gainer V, Goryachev S, Zeng-treitler Q, Raychaudhuri S, Szolovits P, Churchill S, Murphy S, Kohane I, Karlson EW, Plenge RM. Electronic medical records for discovery research in rheumatoid arthritis. Arthritis Care & Research. 62: 1120-7. PMID 20235204 DOI: 10.1002/Acr.20184 |
0.602 |
|
| 2009 |
Murphy S, Churchill S, Bry L, Chueh H, Weiss S, Lazarus R, Zeng Q, Dubey A, Gainer V, Mendis M, Glaser J, Kohane I. Instrumenting the health care enterprise for discovery research in the genomic era. Genome Research. 19: 1675-81. PMID 19602638 DOI: 10.1101/Gr.094615.109 |
0.316 |
|
| 2009 |
Schraefel M, Jacobs R, André P, Kohane I, White R, La Dantec CA, Tan D, Mamykina L, Berners-Lee T, Marsden G, Consolvo S, Shneiderman B, Szolovits P, Weitzner D. Interacting with eHealth - Towards grand challenges for HCI Conference On Human Factors in Computing Systems - Proceedings. 3309-3312. DOI: 10.1145/1520340.1520476 |
0.525 |
|
| 2007 |
Levine M, Adida B, Mandl K, Kohane I, Halamka J. What are the benefits and risks of fitting patients with radiofrequency identification devices. Plos Medicine. 4: 1709-1711. PMID 18044979 DOI: 10.1371/Journal.Pmed.0040322 |
0.316 |
|
| 2007 |
Loscalzo J, Kohane I, Barabasi AL. Human disease classification in the postgenomic era: a complex systems approach to human pathobiology. Molecular Systems Biology. 3: 124. PMID 17625512 DOI: 10.1038/Msb4100163 |
0.304 |
|
| 2006 |
Sebastiani P, Mandl KD, Szolovits P, Kohane IS, Ramoni MF. A Bayesian dynamic model for influenza surveillance. Statistics in Medicine. 25: 1803-16; discussion . PMID 16645996 DOI: 10.1002/Sim.2566 |
0.501 |
|
| 2006 |
Butte AJ, Kohane IS. Creation and implications of a phenome-genome network. Nature Biotechnology. 24: 55-62. PMID 16404398 DOI: 10.1038/Nbt1150 |
0.442 |
|
| 2005 |
Wolfe CJ, Kohane IS, Butte AJ. Systematic survey reveals general applicability of "guilt-by-association" within gene coexpression networks. Bmc Bioinformatics. 6: 227. PMID 16162296 DOI: 10.1186/1471-2105-6-227 |
0.42 |
|
| 2004 |
Kho AT, Zhao Q, Cai Z, Butte AJ, Kim JY, Pomeroy SL, Rowitch DH, Kohane IS. Conserved mechanisms across development and tumorigenesis revealed by a mouse development perspective of human cancers. Genes & Development. 18: 629-40. PMID 15075291 DOI: 10.1101/Gad.1182504 |
0.394 |
|
| 2004 |
Allocco DJ, Kohane IS, Butte AJ. Quantifying the relationship between co-expression, co-regulation and gene function. Bmc Bioinformatics. 5: 18. PMID 15053845 DOI: 10.1186/1471-2105-5-18 |
0.408 |
|
| 2003 |
Patti ME, Butte AJ, Crunkhorn S, Cusi K, Berria R, Kashyap S, Miyazaki Y, Kohane I, Costello M, Saccone R, Landaker EJ, Goldfine AB, Mun E, DeFronzo R, Finlayson J, et al. Coordinated reduction of genes of oxidative metabolism in humans with insulin resistance and diabetes: Potential role of PGC1 and NRF1. Proceedings of the National Academy of Sciences of the United States of America. 100: 8466-71. PMID 12832613 DOI: 10.1073/Pnas.1032913100 |
0.446 |
|
| 2003 |
Nimgaonkar A, Sanoudou D, Butte AJ, Haslett JN, Kunkel LM, Beggs AH, Kohane IS. Reproducibility of gene expression across generations of Affymetrix microarrays. Bmc Bioinformatics. 4: 27. PMID 12823866 DOI: 10.1186/1471-2105-4-27 |
0.412 |
|
| 2003 |
Lee K, Kohane IS, Butte AJ. PGAGENE: integrating quantitative gene-specific results from the NHLBI programs for genomic applications. Bioinformatics (Oxford, England). 19: 778-9. PMID 12691993 DOI: 10.1093/Bioinformatics/Btg066 |
0.433 |
|
| 2002 |
Park PJ, Butte AJ, Kohane IS. Comparing expression profiles of genes with similar promoter regions. Bioinformatics (Oxford, England). 18: 1576-84. PMID 12490441 DOI: 10.1093/Bioinformatics/18.12.1576 |
0.389 |
|
| 2002 |
Kuo WP, Jenssen TK, Butte AJ, Ohno-Machado L, Kohane IS. Analysis of matched mRNA measurements from two different microarray technologies. Bioinformatics (Oxford, England). 18: 405-12. PMID 11934739 DOI: 10.1093/Bioinformatics/18.3.405 |
0.389 |
|
| 2001 |
Butte AJ, Bao L, Reis BY, Watkins TW, Kohane IS. Comparing the similarity of time-series gene expression using signal processing metrics Journal of Biomedical Informatics. 34: 396-405. PMID 12198759 DOI: 10.1006/Jbin.2002.1037 |
0.407 |
|
| 2001 |
Riva A, Mandl KD, Oh DH, Nigrin DJ, Butte AJ, Szolovits P, Kohane IS. The personal internetworked notary and guardian. International Journal of Medical Informatics. 62: 27-40. PMID 11340004 DOI: 10.1016/S1386-5056(00)00136-2 |
0.651 |
|
| 2001 |
Mandl KD, Markwell D, MacDonald R, Szolovits P, Kohane IS. Public standards and patients' control: how to keep electronic medical records accessible but privateMedical information: access and privacyDoctrines for developing electronic medical recordsDesirable characteristics of electronic medical recordsChallenges and limitations for electronic medical recordsConclusionsCommentary: Open approaches to electronic patient recordsCommentary: A patient's viewpoint Bmj. 322: 283-287. PMID 11157533 DOI: 10.1136/Bmj.322.7281.283 |
0.577 |
|
| 2001 |
Butte AJ, Reis B, Kho A, Sun Y, Kohane IS. Analyzing functional genomic differences yields oncogenes and chromosomal breakpoints in ALL and AML Nature Genetics. 27: 45-45. DOI: 10.1038/87022 |
0.366 |
|
| 2000 |
Greenes DS, Fleisher GR, Kohane I. Potential impact of a computerized system to report late-arriving laboratory results in the emergency department. Pediatric Emergency Care. 16: 313-315. PMID 11063357 DOI: 10.1097/00006565-200010000-00002 |
0.319 |
|
| 2000 |
Butte AJ, Tamayo P, Slonim D, Golub TR, Kohane IS. Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks. Proceedings of the National Academy of Sciences of the United States of America. 97: 12182-6. PMID 11027309 DOI: 10.1073/Pnas.220392197 |
0.415 |
|
| 2000 |
Butte AJ, Kohane IS. Mutual information relevance networks: functional genomic clustering using pairwise entropy measurements. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 418-29. PMID 10902190 DOI: 10.1142/9789814447331_0040 |
0.427 |
|
| 1999 |
Butte AJ, Kohane IS. Using Cross-Validation to Find the Optimal Polynomial Model for Pediatric Anthropometric Time-Series Data Pediatric Research. 45: 86-86. DOI: 10.1203/00006450-199904020-00513 |
0.385 |
|
| 1999 |
Butte AJ, Kohane IS. Increasing Frequency of Diabetes Clinic Visits Is Associated with Improving Hemoglobin A1c Pediatric Research. 45: 86A-86A. DOI: 10.1203/00006450-199904020-00512 |
0.377 |
|
| 1999 |
Butte AJ, Kohane IS. The Relationship of Arm Span Vs. Height in Boys with Constitutional Delay and Boys and Girls with Short Stature Pediatric Research. 45: 86A-86A. DOI: 10.1203/00006450-199904020-00511 |
0.34 |
|
| 1998 |
Rind DM, Szolovits P, Kohane IS. Confidentiality and Electronic Medical Records Annals of Internal Medicine. 128: 510-511. DOI: 10.7326/0003-4819-128-6-199803150-00033 |
0.528 |
|
| 1997 |
Rind DM, Kohane IS, Szolovits P, Safran C, Chueh HC, Barnett GO. Maintaining the confidentiality of medical records shared over the Internet and the World Wide Web. Annals of Internal Medicine. 127: 138-41. PMID 9230004 DOI: 10.7326/0003-4819-127-2-199707150-00008 |
0.575 |
|
| 1996 |
Kohane IS, Greenspun P, Fackler JC, Cimino C, Szolovits P. Building National Electronic Medical Record Systems via the World Wide Web Journal of the American Medical Informatics Association. 3: 191-207. PMID 8723610 DOI: 10.1136/Jamia.1996.96310633 |
0.554 |
|
| 1996 |
Greenspun P, Fackler J, Cimino C, Szolovits P, Kohane I. Building national electronic medical record systems via the World Wide Web American Journal of Ophthalmology. 122: 465. DOI: 10.1016/S0002-9394(14)72101-4 |
0.573 |
|
| 1994 |
Szolovits P, Kohane I. Against Simple Universal Health-care Identifiers Journal of the American Medical Informatics Association. 1: 316-319. PMID 7719815 DOI: 10.1136/Jamia.1994.95236164 |
0.588 |
|
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