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Preetam Ghosh, Ph.D. - Publications

Affiliations: 
2007 Computer Science & Engineering University of Texas at Arlington, Arlington, TX, United States 
Area:
Computer Science, Bioinformatics Biology
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33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Roy S, Ghosh P, Barua D, Das SK. Motifs enable communication efficiency and fault-tolerance in transcriptional networks. Scientific Reports. 10: 9628. PMID 32541819 DOI: 10.1038/S41598-020-66573-X  0.485
2020 Ghosh P, Rana P, Rangachari V, Saha J, Steen E, Vaidya A. A game-theoretic approach to deciphering the dynamics of amyloid- aggregation along competing pathways. Royal Society Open Science. 7: 191814. PMID 32431878 DOI: 10.1098/Rsos.191814  0.318
2017 Rowland MA, Abdelzaher A, Ghosh P, Mayo ML. Crosstalk and the Dynamical Modularity of Feed-Forward Loops in Transcriptional Regulatory Networks. Biophysical Journal. 112: 1539-1550. PMID 28445746 DOI: 10.1016/J.Bpj.2017.02.044  0.336
2017 Nguyen HT, Ghosh P, Mayo ML, Dinh TN. Social Influence Spectrum at Scale: Near-Optimal Solutions for Multiple Budgets at Once Acm Transactions On Information Systems. 36: 14. DOI: 10.1145/3086700  0.311
2017 Syed K, Abdelzaher A, Mayo M, Ghosh P. Correction to: Similar Feed-forward Loop Crosstalk Patterns may Impact Robust Information Transport Across E. coli and S. Cerevisiae Transcriptional Networks Mobile Networks and Applications. 1-1. DOI: 10.1007/S11036-017-0978-7  0.33
2016 Nazi A, Raj M, Francesco MD, Ghosh P, Das SK. 2015 IEEE Global Communications Conference, GLOBECOM 2015 The Institute of Electrical and Electronics Engineers. DOI: 10.1109/Glocom.2015.7416957  0.397
2016 Kamapantula BK, Mayo ML, Perkins EJ, Ghosh P. The Structural Role of Feed-Forward Loop Motif in Transcriptional Regulatory Networks Mobile Networks and Applications. 21: 191-205. DOI: 10.1007/S11036-016-0708-6  0.341
2015 Abdelzaher AF, Al-Musawi AF, Ghosh P, Mayo ML, Perkins EJ. Transcriptional Network Growing Models Using Motif-Based Preferential Attachment. Frontiers in Bioengineering and Biotechnology. 3: 157. PMID 26528473 DOI: 10.3389/Fbioe.2015.00157  0.356
2015 Barh D, Kamapantula B, Jain N, Nalluri J, Bhattacharya A, Juneja L, Barve N, Tiwari S, Miyoshi A, Azevedo V, Blum K, Kumar A, Silva A, Ghosh P. miRegulome: a knowledge-base of miRNA regulomics and analysis. Scientific Reports. 5: 12832. PMID 26243198 DOI: 10.1038/Srep12832  0.469
2015 Nalluri JJ, Kamapantula BK, Barh D, Jain N, Bhattacharya A, de Almeida S, Juca Ramos R, Silva A, Azevedo V, Ghosh P. DISMIRA: Prioritization of disease candidates in miRNA-disease associations based on maximum weighted matching inference model and motif-based analysis. Bmc Genomics. 16: S12. PMID 26040329 DOI: 10.1186/1471-2164-16-S5-S12  0.475
2015 Abdelzaher AF, Mayo ML, Perkins EJ, Ghosh P. Contribution of canonical feed-forward loop motifs on the fault-tolerance and information transport efficiency of transcriptional regulatory networks Nano Communication Networks. DOI: 10.1016/J.Nancom.2015.04.002  0.324
2014 Mayo M, Abdelzaher A, Perkins EJ, Ghosh P. Top-level dynamics and the regulated gene response of feed-forward loop transcriptional motifs. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 90: 032706. PMID 25314472 DOI: 10.1103/Physreve.90.032706  0.321
2014 Nazi A, Raj M, Francesco MD, Ghosh P, Das SK. Fast track article: Deployment of robust wireless sensor networks using gene regulatory networks: An isomorphism-based approach Pervasive and Mobile Computing. 13: 246-257. DOI: 10.1016/J.Pmcj.2014.03.005  0.474
2013 Ghag G, Ghosh P, Mauro A, Rangachari V, Vaidya A. Stability analysis of 4-species Aβ aggregation model: A novel approach to obtaining physically meaningful rate constants. Applied Mathematics and Computation. 224: 205-215. PMID 25018569 DOI: 10.1016/J.Amc.2013.08.053  0.304
2012 Mayo M, Abdelzaher AF, Perkins EJ, Ghosh P. Motif Participation by Genes in E. coli Transcriptional Networks. Frontiers in Physiology. 3: 357. PMID 23055976 DOI: 10.3389/Fphys.2012.00357  0.315
2012 Ghosh S, Ghosh P, Basu K, Das SK, Daefler S. A Discrete Event Based Stochastic Simulation Platform for âÂÂIn silicoâ Study of Molecular-level Cellular Dynamics Journal of Biotechnology & Biomaterials. DOI: 10.4172/2155-952X.S6-001  0.706
2011 Chaitankar V, Zhang C, Ghosh P, Gong P, Perkins EJ, Deng Y. Predictive minimum description length principle approach to inferring gene regulatory networks. Advances in Experimental Medicine and Biology. 696: 37-43. PMID 21431544 DOI: 10.1007/978-1-4419-7046-6_4  0.341
2010 Ghosh P, Ghosh S, Basu K, Das SK, Zhang C. Discrete diffusion models to study the effects of Mg2+ concentration on the PhoPQ signal transduction system. Bmc Genomics. 11: S3. PMID 21143785 DOI: 10.1186/1471-2164-11-S3-S3  0.727
2010 Ghosh P, Kumar A, Datta B, Rangachari V. Dynamics of protofibril elongation and association involved in Aβ42 peptide aggregation in Alzheimer's disease. Bmc Bioinformatics. 11: S24. PMID 20946608 DOI: 10.1186/1471-2105-11-S6-S24  0.319
2010 Chaitankar V, Ghosh P, Perkins EJ, Gong P, Zhang C. Time lagged information theoretic approaches to the reverse engineering of gene regulatory networks. Bmc Bioinformatics. 11: S19. PMID 20946602 DOI: 10.1186/1471-2105-11-S6-S19  0.348
2010 Chaitankar V, Ghosh P, Perkins EJ, Gong P, Deng Y, Zhang C. A novel gene network inference algorithm using predictive minimum description length approach. Bmc Systems Biology. 4: S7. PMID 20522257 DOI: 10.1186/1752-0509-4-S1-S7  0.335
2010 Choe HJ, Ghosh P, Das SK. QoS-aware data reporting control in cluster-based wireless sensor networks Computer Communications. 33: 1244-1254. DOI: 10.1016/J.Comcom.2010.02.008  0.657
2009 Ghosh P, Dullea R, Fischer JE, Turi TG, Sarver RW, Zhang C, Basu K, Das SK, Poland BW. Comparing 2-nt 3' overhangs against blunt-ended siRNAs: a systems biology based study. Bmc Genomics. 10: S17. PMID 19594876 DOI: 10.1186/1471-2164-10-S1-S17  0.667
2009 Ghosh P, Ghosh S, Basu K, Das S. Parametric modeling of protein-DNA binding kinetics: A discrete event based simulation approach Discrete Applied Mathematics. 157: 2395-2415. DOI: 10.1016/J.Dam.2008.06.046  0.717
2008 Das SK, Ghosh P, Ghosh I, Guha AK. Adsorption of rhodamine B on Rhizopus oryzae: role of functional groups and cell wall components. Colloids and Surfaces. B, Biointerfaces. 65: 30-4. PMID 18407472 DOI: 10.1016/j.colsurfb.2008.02.020  0.318
2008 Ghosh P, Ghosh S, Basu K, Das SK. Holding time estimation for reactions in stochastic event-based simulation of complex biological systems Simulation Modelling Practice and Theory. 16: 1615-1639. DOI: 10.1016/J.Simpat.2007.09.002  0.723
2008 Mazloom AR, Ghosh P, Basu K, Das SK. CoCONet: A collision-free container-based core optical network Computer Networks. 52: 2013-2032. DOI: 10.1016/J.Comnet.2007.11.024  0.743
2008 Ghosh P, Basu K, Das SK. Improving end-to-end quality-of-service in online multi-player wireless gaming networks Computer Communications. 31: 2685-2698. DOI: 10.1016/J.Comcom.2008.02.025  0.673
2007 Ghosh P, Ghosh S, Basu K, Das SK. A markov model based analysis of stochastic biochemical systems. Computational Systems Bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference. 6: 121-32. PMID 17951818  0.713
2007 Ghosh P, Basu K, Das SK. A Game Theory-Based Pricing Strategy to Support Single/Multiclass Job Allocation Schemes for Bandwidth-Constrained Distributed Computing Systems Ieee Transactions On Parallel and Distributed Systems. 18: 289-306. DOI: 10.1109/Tpds.2007.34  0.67
2007 Ghosh P, Basu K, Das SK. A Novel Photonic Container Switched Architecture and Scheduler to Design the Core Transport Network Ieee Transactions On Computers. 56: 1087-1104. DOI: 10.1109/Tc.2007.1061  0.674
2006 Lin H, Ghosh P, Das P. Wireless Networks Revenue Optimization through Overload Control with Priority Services Journal of Communications. 1: 22-30. DOI: 10.4304/Jcm.1.4.22-30  0.325
2005 Ghosh P, Roy N, Das SK, Basu K. A pricing strategy for job allocation in mobile grids using a non-cooperative bargaining theory framework Journal of Parallel and Distributed Computing. 65: 1366-1383. DOI: 10.1016/J.Jpdc.2005.05.013  0.721
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