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Alan M. Watson, Ph.D. - Publications

Affiliations: 
University of Pittsburgh, Pittsburgh, PA, United States 
 2011 Pennsylvania State University, State College, PA, United States 
Area:
Virology, Neurobiology, Microscopy, big-data, machine learning
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30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Vasylieva I, Smith M, Jacoby M, Scarlet J, Aravind E, Zilberberg A, Ling T, Ropelewski A, Klimstra W, Logan R, Freyberg Z, Watson A. Scalable Analysis Pipeline for Mapping Brain Cells in Big Microscopy Data. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 29: 993. PMID 37613788 DOI: 10.1093/micmic/ozad067.497  0.524
2023 Maggiore JC, LeGraw R, Przepiorski A, Velazquez J, Chaney C, Streeter E, Silva-Barbosa A, Franks J, Hislop J, Hill A, Wu H, Pfister K, Howden SE, Watkins SC, Little M, ... ... Watson A, et al. Genetically engineering endothelial niche in human kidney organoids enables multilineage maturation, vascularization and de novo cell types. Biorxiv : the Preprint Server For Biology. PMID 37333155 DOI: 10.1101/2023.05.30.542848  0.352
2022 Molina LM, Krutsenko Y, Jenkins NEC, Smith MC, Tao J, Wheeler TB, Watkins SC, Watson AM, Monga SP. LiverClear: A versatile protocol for mouse liver tissue clearing. Star Protocols. 3: 101178. PMID 35243370 DOI: 10.1016/j.xpro.2022.101178  0.301
2021 Molina LM, Zhu J, Li Q, Pradhan-Sundd T, Krutsenko Y, Sayed K, Jenkins N, Vats R, Bhushan B, Ko S, Hu S, Poddar M, Singh S, Tao J, Sundd P, ... ... Watson A, et al. Compensatory hepatic adaptation accompanies permanent absence of intrahepatic biliary network due to YAP1 loss in liver progenitors. Cell Reports. 36: 109310. PMID 34233187 DOI: 10.1016/j.celrep.2021.109310  0.344
2020 Bain WG, Peñaloza HF, Ladinsky MS, van der Geest R, Sullivan M, Ross M, Kitsios GD, Methe B, McVerry BJ, Morris A, Watson AM, Watkins SC, St Croix CM, Stolz DB, Bjorkman PJ, et al. Lower respiratory tract myeloid cells harbor SARS-CoV-2 and display an inflammatory phenotype. Chest. PMID 33217417 DOI: 10.1016/j.chest.2020.10.083  0.363
2020 Birder LA, Wolf-Johnston A, Wein AJ, Cheng F, Grove-Sullivan M, Kanai AJ, Watson AM, Stolz D, Watkins SC, Robertson AM, Newman D, Dmochowski RR, Jackson EK. Purine nucleoside phosphorylase Inhibition ameliorates age-associated lower urinary tract dysfunctions. Jci Insight. PMID 32910805 DOI: 10.1172/Jci.Insight.140109  0.407
2020 Bain W, Penaloza HF, Ladinsky MS, van der Geest R, Sullivan M, Ross M, Kitsios GD, Methe B, McVerry BJ, Morris A, Watson AM, Watkins SC, St Croix CM, Stolz DB, Bjorkman PJ, et al. Lower respiratory tract myeloid cells harbor SARS-CoV-2 and display an inflammatory phenotype. Medrxiv : the Preprint Server For Health Sciences. PMID 32817968 DOI: 10.1101/2020.08.11.20171967  0.43
2020 Bain W, Lee JS, Watson AM, Stitt-Fischer MS. Practical Guidelines for Collection, Manipulation and Inactivation of SARS-CoV-2 and COVID-19 Clinical Specimens. Current Protocols in Cytometry. 93: e77. PMID 32502333 DOI: 10.1002/Cpcy.77  0.309
2020 Loewen RT, Waxman S, Wang C, Atta S, Chen S, Watkins SC, Watson AM, Loewen NA. 3D-Reconstruction of the human conventional outflow system by ribbon scanning confocal microscopy. Plos One. 15: e0232833. PMID 32421732 DOI: 10.1371/Journal.Pone.0232833  0.404
2020 Ghosh S, Stepicheva N, Yazdankhah M, Shang P, Watson AM, Hose S, Liu H, Weiss J, Zigler JS, Valapala M, Watkins SC, Sinha D. The role of lipocalin-2 in age-related macular degeneration (AMD). Cellular and Molecular Life Sciences : Cmls. PMID 31901947 DOI: 10.1007/S00018-019-03423-8  0.433
2020 Molina LM, Watson A, Li Q, Pradhan-Sundd T, Poddar M, Singh S, Feranchak D, Watkins S, Nejak-Bowen K, Monga S. Novel Model of Bile Duct Paucity Demonstrates the Critical Role of Yap1 in Biliary Morphogenesis in Development and Regeneration The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.04668  0.398
2019 Ghosh S, Padmanabhan A, Vaidya T, Watson AM, Bhutto IA, Hose S, Shang P, Stepicheva N, Yazdankhah M, Weiss J, Das M, Gopikrishna S, Aishwarya, Yadav N, Berger T, et al. Neutrophils homing into the retina trigger pathology in early age-related macular degeneration. Communications Biology. 2: 348. PMID 31552301 DOI: 10.1038/s42003-019-0588-y  0.347
2019 Watson AM, Watkins SC. Massive Volumetric Imaging of Cleared Tissue: The Necessary Tools to be Successful. The International Journal of Biochemistry & Cell Biology. PMID 31085331 DOI: 10.1016/J.Biocel.2019.05.007  0.399
2019 Tyurina YY, St Croix CM, Watkins SC, Watson AM, Epperly MW, Anthonymuthu TS, Kisin ER, Vlasova II, Krysko O, Krysko DV, Kapralov AA, Dar HH, Tyurin VA, Amoscato AA, Popova EN, et al. Redox (phospho)lipidomics of signaling in inflammation and programmed cell death. Journal of Leukocyte Biology. PMID 31071242 DOI: 10.1002/Jlb.3Mir0119-004Rr  0.428
2019 Singh M, Tian XJ, Donnenberg VS, Watson AM, Zhang J, Stabile LP, Watkins SC, Xing J, Sant S. Targeting the temporal dynamics of hypoxia-induced tumor-secreted factors halts tumor migration. Cancer Research. PMID 30952634 DOI: 10.1158/0008-5472.Can-18-3151  0.405
2018 Waxman S, Loewen RT, Dang Y, Watkins SC, Watson AM, Loewen NA. High-Resolution, Three-Dimensional Reconstruction of the Outflow Tract Demonstrates Segmental Differences in Cleared Eyes. Investigative Ophthalmology & Visual Science. 59: 2371-2380. PMID 29847643 DOI: 10.1167/Iovs.17-23075  0.397
2018 Lane WC, Dunn MD, Gardner CL, Lam LKM, Watson AM, Hartman AL, Ryman KD, Klimstra WB. The Efficacy of the Interferon Alpha/Beta Response versus Arboviruses Is Temperature Dependent. Mbio. 9. PMID 29691338 DOI: 10.1128/Mbio.00535-18  0.71
2018 Lam LKM, Watson AM, Ryman KD, Klimstra WB. Gamma-interferon exerts a critical early restriction on replication and dissemination of yellow fever virus vaccine strain 17D-204. Npj Vaccines. 3: 5. PMID 29387474 DOI: 10.1038/s41541-017-0039-z  0.733
2017 Fantus D, Dai H, Ono Y, Watson A, Yokota S, Mohib K, Yoshida O, Ross MA, Watkins SC, Ramaswami B, Valusjkikh A, Rothstein DM, Thomson AW. Influence of the Novel ATP-Competitive Dual mTORC1/2 Inhibitor AZD2014 on Immune Cell Populations and Heart Allograft Rejection. Transplantation. PMID 28885497 DOI: 10.1097/Tp.0000000000001933  0.345
2017 Watson AM, Rose AH, Gibson GA, Gardner CL, Sun C, Reed DS, Lam LKM, St Croix CM, Strick PL, Klimstra WB, Watkins SC. Ribbon scanning confocal for high-speed high-resolution volume imaging of brain. Plos One. 12: e0180486. PMID 28686653 DOI: 10.1371/Journal.Pone.0180486  0.628
2017 Watson AM, Klimstra WB. T Cell-Mediated Immunity towards Yellow Fever Virus and Useful Animal Models. Viruses. 9. PMID 28398253 DOI: 10.3390/V9040077  0.655
2016 Troupin A, Shirley D, Londono-Renteria B, Watson AM, McHale C, Hall A, Hartstone-Rose A, Klimstra WB, Gomez G, Colpitts TM. A Role for Human Skin Mast Cells in Dengue Virus Infection and Systemic Spread. Journal of Immunology (Baltimore, Md. : 1950). PMID 27799312 DOI: 10.4049/Jimmunol.1600846  0.632
2016 Conway MJ, Londono-Renteria B, Troupin A, Watson AM, Klimstra WB, Fikrig E, Colpitts TM. Aedes aegypti D7 Saliva Protein Inhibits Dengue Virus Infection. Plos Neglected Tropical Diseases. 10: e0004941. PMID 27632170 DOI: 10.1371/Journal.Pntd.0004941  0.623
2016 Watson AM, Lam LK, Klimstra WB, Ryman KD. The 17D-204 Vaccine Strain-Induced Protection against Virulent Yellow Fever Virus Is Mediated by Humoral Immunity and CD4+ but not CD8+ T Cells. Plos Pathogens. 12: e1005786. PMID 27463517 DOI: 10.1371/Journal.Ppat.1005786  0.741
2016 Tree MO, McKellar DR, Kieft KJ, Watson AM, Ryman KD, Conway MJ. Insect-specific flavivirus infection is restricted by innate immunity in the vertebrate host. Virology. 497: 81-91. PMID 27433779 DOI: 10.1016/J.Virol.2016.07.005  0.678
2014 Sun C, Gardner CL, Watson AM, Ryman KD, Klimstra WB. Stable, high-level expression of reporter proteins from improved alphavirus expression vectors to track replication and dissemination during encephalitic and arthritogenic disease. Journal of Virology. 88: 2035-46. PMID 24307590 DOI: 10.1128/Jvi.02990-13  0.727
2014 Conway MJ, Watson AM, Colpitts TM, Dragovic SM, Li Z, Wang P, Feitosa F, Shepherd DT, Ryman KD, Klimstra WB, Anderson JF, Fikrig E. Mosquito saliva serine protease enhances dissemination of dengue virus into the mammalian host. Journal of Virology. 88: 164-75. PMID 24131723 DOI: 10.1128/Jvi.02235-13  0.735
2012 Watson AM, Mylin LM, Thompson MM, Schell TD. Modification of a tumor antigen determinant to improve peptide/MHC stability is associated with increased immunogenicity and cross-priming a larger fraction of CD8+ T cells. Journal of Immunology (Baltimore, Md. : 1950). 189: 5549-60. PMID 23175697 DOI: 10.4049/Jimmunol.1102221  0.631
2010 Tatum AM, Watson AM, Schell TD. Direct presentation regulates the magnitude of the CD8+ T cell response to cell-associated antigen through prolonged T cell proliferation. Journal of Immunology (Baltimore, Md. : 1950). 185: 2763-72. PMID 20660711 DOI: 10.4049/Jimmunol.0903920  0.688
2008 Tagaram HR, Watson AM, Lemonnier FA, Staveley-O'Carroll K, Tevethia SS, Schell TD. An SV40 VP1-derived epitope recognized by CD8+ T cells is naturally processed and presented by HLA-A*0201 and cross-reactive with human polyomavirus determinants. Virology. 376: 183-90. PMID 18402997 DOI: 10.1016/J.Virol.2008.02.033  0.637
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