T Mark Zabriskie - Publications

Affiliations: 
Oregon State University, Corvallis, OR 
Area:
Pharmaceutical Chemistry, Organic Chemistry, Molecular Biology

31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Quecine MC, Kidarsa TA, Goebel NC, Shaffer BT, Henkels MD, Zabriskie TM, Loper JE. An Interspecies Signaling System Mediated by Fusaric Acid Has Parallel Effects on Antifungal Metabolite Production by Pseudomonas protegens Strain Pf-5 and Antibiosis of Fusarium spp. Applied and Environmental Microbiology. 82: 1372-82. PMID 26655755 DOI: 10.1128/Aem.02574-15  0.751
2015 Sheng Y, Lam PW, Shahab S, Santosa DA, Proteau PJ, Zabriskie TM, Mahmud T. Identification of Elaiophylin Skeletal Variants from the Indonesian Streptomyces sp. ICBB 9297. Journal of Natural Products. PMID 26510047 DOI: 10.1021/Acs.Jnatprod.5B00752  0.361
2015 Serrill JD, Tan M, Fotso S, Sikorska J, Kasanah N, Hau AM, McPhail KL, Santosa DA, Zabriskie TM, Mahmud T, Viollet B, Proteau PJ, Ishmael JE. Apoptolidins A and C activate AMPK in metabolically sensitive cell types and are mechanistically distinct from oligomycin A Biochemical Pharmacology. 93: 251-265. PMID 25511868 DOI: 10.1016/J.Bcp.2014.11.015  0.305
2014 Henkels MD, Kidarsa TA, Shaffer BT, Goebel NC, Burlinson P, Mavrodi DV, Bentley MA, Rangel LI, Davis EW, Thomashow LS, Zabriskie TM, Preston GM, Loper JE. Pseudomonas protegens Pf-5 causes discoloration and pitting of mushroom caps due to the production of antifungal metabolites. Molecular Plant-Microbe Interactions : Mpmi. 27: 733-46. PMID 24742073 DOI: 10.1094/Mpmi-10-13-0311-R  0.735
2013 Burroughs AM, Hoppe RW, Goebel NC, Sayyed BH, Voegtline TJ, Schwabacher AW, Zabriskie TM, Silvaggi NR. Structural and functional characterization of MppR, an enduracididine biosynthetic enzyme from streptomyces hygroscopicus: Functional diversity in the acetoacetate decarboxylase-like superfamily Biochemistry. 52: 4492-4506. PMID 23758195 DOI: 10.1021/Bi400397K  0.709
2013 Li L, Wu J, Deng Z, Zabriskie TM, He X. Streptomyces lividans blasticidin S deaminase and its application in engineering a blasticidin S-producing strain for ease of genetic manipulation. Applied and Environmental Microbiology. 79: 2349-57. PMID 23377931 DOI: 10.1128/Aem.03254-12  0.381
2013 Kidarsa TA, Shaffer BT, Goebel NC, Roberts DP, Buyer JS, Johnson A, Kobayashi DY, Zabriskie TM, Paulsen I, Loper JE. Genes expressed by the biological control bacterium Pseudomonas protegens Pf-5 on seed surfaces under the control of the global regulators GacA and RpoS. Environmental Microbiology. 15: 716-35. PMID 23297839 DOI: 10.1111/1462-2920.12066  0.738
2012 Wu J, Li L, Deng Z, Zabriskie TM, He X. Analysis of the mildiomycin biosynthesis gene cluster in Streptoverticillum remofaciens ZJU5119 and characterization of MilC, a hydroxymethyl cytosyl-glucuronic acid synthase. Chembiochem : a European Journal of Chemical Biology. 13: 1613-21. PMID 22753012 DOI: 10.1002/Cbic.201200173  0.451
2011 Kidarsa TA, Goebel NC, Zabriskie TM, Loper JE. Phloroglucinol mediates cross-talk between the pyoluteorin and 2,4-diacetylphloroglucinol biosynthetic pathways in Pseudomonas fluorescens Pf-5. Molecular Microbiology. 81: 395-414. PMID 21564338 DOI: 10.1111/J.1365-2958.2011.07697.X  0.764
2010 Yin X, Chen Y, Zhang L, Wang Y, Zabriskie TM. Enduracidin analogues with altered halogenation patterns produced by genetically engineered strains of Streptomyces fungicidicus. Journal of Natural Products. 73: 583-9. PMID 20353165 DOI: 10.1021/Np900710Q  0.412
2010 Thornburg CC, Zabriskie TM, McPhail KL. Deep-sea hydrothermal vents: potential hot spots for natural products discovery? Journal of Natural Products. 73: 489-99. PMID 20099811 DOI: 10.1021/Np900662K  0.345
2010 Fotso S, Santosa DA, Saraswati R, Yang J, Mahmud T, Zabriskie TM, Proteau PJ. Modified phenazines from an Indonesian Streptomyces sp. Journal of Natural Products. 73: 472-5. PMID 20092333 DOI: 10.1021/Np9005647  0.318
2010 Hassan KA, Johnson A, Shaffer BT, Ren Q, Kidarsa TA, Elbourne LD, Hartney S, Duboy R, Goebel NC, Zabriskie TM, Paulsen IT, Loper JE. Inactivation of the GacA response regulator in Pseudomonas fluorescens Pf-5 has far-reaching transcriptomic consequences. Environmental Microbiology. 12: 899-915. PMID 20089046 DOI: 10.1111/J.1462-2920.2009.02134.X  0.758
2010 Wang T, Shah YM, Matsubara T, Zhen Y, Tanabe T, Nagano T, Fotso S, Krausz KW, Zabriskie TM, Idle JR, Gonzalez FJ. Control of steroid 21-oic acid synthesis by peroxisome proliferator-activated receptor alpha and role of the hypothalamic-pituitary-adrenal axis. The Journal of Biological Chemistry. 285: 7670-85. PMID 20032461 DOI: 10.1074/Jbc.M109.090175  0.39
2009 Fotso S, Zabriskie TM, Proteau PJ, Flatt PM, Santosa DA, Mahmud T. Limazepines A-F, pyrrolo[1,4]benzodiazepine Antibiotics from an Indonesian Micrococcus sp. Journal of Natural Products. 72: 690-5. PMID 19388705 DOI: 10.1021/Np800827W  0.367
2008 Li L, Xu Z, Xu X, Wu J, Zhang Y, He X, Zabriskie TM, Deng Z. The mildiomycin biosynthesis: initial steps for sequential generation of 5-hydroxymethylcytidine 5'-monophosphate and 5-hydroxymethylcytosine in Streptoverticillium rimofaciens ZJU5119. Chembiochem : a European Journal of Chemical Biology. 9: 1286-94. PMID 18412191 DOI: 10.1002/Cbic.200800008  0.5
2008 Fotso S, Mahmud T, Zabriskie TM, Santosa DA, Sulastri, Proteau PJ. Angucyclinones from an Indonesian Streptomyces sp. Journal of Natural Products. 71: 61-5. PMID 18081255 DOI: 10.1021/Np0704102  0.363
2007 Fei X, Yin X, Zhang L, Zabriskie TM. Roles of VioG and VioQ in the incorporation and modification of the Capreomycidine residue in the peptide antibiotic viomycin. Journal of Natural Products. 70: 618-22. PMID 17302456 DOI: 10.1021/Np060605U  0.404
2006 Yin X, Zabriskie TM. The enduracidin biosynthetic gene cluster from Streptomyces fungicidicus. Microbiology (Reading, England). 152: 2969-83. PMID 17005978 DOI: 10.1099/mic.0.29043-0  0.309
2006 Rachid S, Krug D, Kunze B, Kochems I, Scharfe M, Zabriskie TM, Blöcker H, Müller R. Molecular and biochemical studies of chondramide formation-highly cytotoxic natural products from Chondromyces crocatus Cm c5. Chemistry & Biology. 13: 667-81. PMID 16793524 DOI: 10.1016/J.Chembiol.2006.06.002  0.451
2006 Giri S, Idle JR, Chen C, Zabriskie TM, Krausz KW, Gonzalez FJ. A metabolomic approach to the metabolism of the areca nut alkaloids arecoline and arecaidine in the mouse. Chemical Research in Toxicology. 19: 818-27. PMID 16780361 DOI: 10.1021/Tx0600402  0.302
2006 Grochowski LL, Zabriskie TM. Characterization of BlsM, a nucleotide hydrolase involved in cytosine production for the biosynthesis of blasticidin S. Chembiochem : a European Journal of Chemical Biology. 7: 957-64. PMID 16642528 DOI: 10.1002/Cbic.200600026  0.766
2005 Haltli B, Tan Y, Magarvey NA, Wagenaar M, Yin X, Greenstein M, Hucul JA, Zabriskie TM. Investigating β-hydroxyenduracididine formation in the biosynthesis of the mannopeptimycins Chemistry and Biology. 12: 1163-1168. PMID 16298295 DOI: 10.1016/J.Chembiol.2005.09.013  0.394
2005 Ritacco FV, Graziani EI, Summers MY, Zabriskie TM, Yu K, Bernan VS, Carter GT, Greenstein M. Production of novel rapamycin analogs by precursor-directed biosynthesis. Applied and Environmental Microbiology. 71: 1971-6. PMID 15812028 DOI: 10.1128/Aem.71.4.1971-1976.2005  0.361
2004 Yin X, McPhail KL, Kim KJ, Zabriskie TM. Formation of the nonproteinogenic amino acid 2S,3R-capreomycidine by VioD from the viomycin biosynthesis pathway. Chembiochem : a European Journal of Chemical Biology. 5: 1278-81. PMID 15368581 DOI: 10.1002/Cbic.200400187  0.306
2003 Cone MC, Yin X, Grochowski LL, Parker MR, Zabriskie TM. The blasticidin S biosynthesis gene cluster from Streptomyces griseochromogenes: sequence analysis, organization, and initial characterization. Chembiochem : a European Journal of Chemical Biology. 4: 821-8. PMID 12964155 DOI: 10.1002/Cbic.200300583  0.752
2003 Yin X, O'Hare T, Gould SJ, Zabriskie TM. Identification and cloning of genes encoding viomycin biosynthesis from Streptomyces vinaceus and evidence for involvement of a rare oxygenase. Gene. 312: 215-24. PMID 12909358 DOI: 10.1016/S0378-1119(03)00617-6  0.426
2003 Graziani EI, Ritacco FV, Summers MY, Zabriskie TM, Yu K, Bernan VS, Greenstein M, Carter GT. Novel sulfur-containing rapamycin analogs prepared by precursor-directed biosynthesis. Organic Letters. 5: 2385-8. PMID 12841736 DOI: 10.1021/Ol034591K  0.378
2002 Jackson MD, Gould SJ, Zabriskie TM. Studies on the formation and incorporation of streptolidine in the biosynthesis of the peptidyl nucleoside antibiotic streptothricin F. The Journal of Organic Chemistry. 67: 2934-41. PMID 11975549 DOI: 10.1021/Jo016182C  0.337
1998 Cone MC, Petrich AK, Gould SJ, Zabriskie TM. Cloning and heterologous expression of blasticidin S biosynthetic genes from Streptomyces griseochromogenes. The Journal of Antibiotics. 51: 570-8. PMID 9711220 DOI: 10.7164/Antibiotics.51.570  0.337
1997 Zabriskie TM, Liang X. Mechanism-based inactivation of L-pipecolate oxidase by a sulfur-containing substrate analog, 5-THIA-L-pipecolic acid Bioorganic and Medicinal Chemistry Letters. 7: 457-462. DOI: 10.1016/S0960-894X(97)00042-5  0.305
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