| Year |
Citation |
Score |
| 2020 |
Lomas WE, Gao G, Li N, Saksena S, Chattopadhyay PK. Abstract 3301: Immune monitoring for immuno-oncology applications Immunology. 80: 3301-3301. DOI: 10.1158/1538-7445.Am2020-3301 |
0.38 |
|
| 2019 |
Cossarizza A, Chang HD, Radbruch A, Acs A, Adam D, Adam-Klages S, Agace WW, Aghaeepour N, Akdis M, Allez M, Almeida LN, Alvisi G, Anderson G, Andrä I, Annunziato F, ... ... Chattopadhyay PK, et al. Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition). European Journal of Immunology. 49: 1457-1973. PMID 31633216 DOI: 10.1002/Eji.201970107 |
0.341 |
|
| 2019 |
Chattopadhyay PK, Winters AF, Lomas Iii WE, Laino AS, Woods DM. High-Parameter Single-Cell Analysis. Annual Review of Analytical Chemistry (Palo Alto, Calif.). PMID 30699035 DOI: 10.1146/Annurev-Anchem-061417-125927 |
0.371 |
|
| 2019 |
Lomas WE, Winters AF, Alexandre J, Martin J, Bansal N, Nakamoto M, Gaylord B, Saksena S, Chattopadhyay PK. Abstract 4118: Molecular cytometry for immunotherapy trials Cancer Research. 79: 4118-4118. DOI: 10.1158/1538-7445.Sabcs18-4118 |
0.368 |
|
| 2019 |
Weber JS, Hodi S, Wind-Rotolo M, Woods D, Winter A, Chattopadhyay P, Laino A. Cell phenotypes associated with response and toxicity defined by high resolution flow cytometry in melanoma patients receiving checkpoint inhibition Annals of Oncology. 30. DOI: 10.1093/Annonc/Mdz255.004 |
0.357 |
|
| 2018 |
Nettey L, Giles AJ, Chattopadhyay PK. OMIP-050: A 28-color/30-parameter Fluorescence Flow Cytometry Panel to Enumerate and Characterize Cells Expressing a Wide Array of Immune Checkpoint Molecules. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 30347136 DOI: 10.1002/Cyto.A.23608 |
0.337 |
|
| 2018 |
Upadhaya S, Sawai CM, Papalexi E, Rashidfarrokhi A, Jang G, Chattopadhyay P, Satija R, Reizis B. Kinetics of adult hematopoietic stem cell differentiation in vivo. The Journal of Experimental Medicine. PMID 30291161 DOI: 10.1084/Jem.20180136 |
0.314 |
|
| 2017 |
Cossarizza A, Chang HD, Radbruch A, Andrä I, Annunziato F, Bacher P, Barnaba V, Battistini L, Bauer WM, Baumgart S, Becher B, Beisker W, Berek C, Blanco A, Borsellino G, ... ... Chattopadhyay PK, et al. Guidelines for the use of flow cytometry and cell sorting in immunological studies. European Journal of Immunology. 47: 1584-1797. PMID 29023707 DOI: 10.1002/Eji.201646632 |
0.42 |
|
| 2017 |
Stoeckius M, Hafemeister C, Stephenson W, Houck-Loomis B, Chattopadhyay PK, Swerdlow H, Satija R, Smibert P. Simultaneous epitope and transcriptome measurement in single cells. Nature Methods. PMID 28759029 DOI: 10.1038/Nmeth.4380 |
0.338 |
|
| 2017 |
Bolton DL, McGinnis K, Finak G, Chattopadhyay P, Gottardo R, Roederer M. Combined single-cell quantitation of host and SIV genes and proteins ex vivo reveals host-pathogen interactions in individual cells. Plos Pathogens. 13: e1006445. PMID 28654687 DOI: 10.1371/Journal.Ppat.1006445 |
0.39 |
|
| 2017 |
Maciorowski Z, Chattopadhyay PK, Jain P. Basic Multicolor Flow Cytometry. Current Protocols in Immunology. 117: 5.4.1-5.4.38. PMID 28369683 DOI: 10.1002/Cpim.26 |
0.375 |
|
| 2017 |
Dominguez M, Roederer M, Chattopadhyay PK. Highly Multiplexed, Single Cell Transcriptomic Analysis of T-Cells by Microfluidic PCR. Methods in Molecular Biology (Clifton, N.J.). 1514: 187-202. PMID 27787802 DOI: 10.1007/978-1-4939-6548-9_15 |
0.385 |
|
| 2016 |
Beddall M, Chattopadhyay PK, Kao SF, Foulds K, Roederer M. A simple tube adapter to expedite and automate thawing of viably frozen cells. Journal of Immunological Methods. PMID 27594593 DOI: 10.1016/J.Jim.2016.08.009 |
0.335 |
|
| 2016 |
Fletez-Brant K, Špidlen J, Brinkman RR, Roederer M, Chattopadhyay PK. flowClean: Automated identification and removal of fluorescence anomalies in flow cytometry data. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 26990501 DOI: 10.1002/Cyto.A.22837 |
0.317 |
|
| 2015 |
Aghaeepour N, Chattopadhyay P, Chikina M, Dhaene T, Van Gassen S, Kursa M, Lambrecht BN, Malek M, Qian Y, Qiu P, Saeys Y, Stanton R, Tong D, Vens C, Walkowiak S, et al. A benchmark for evaluation of algorithms for identification of cellular correlates of clinical outcomes. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 26447924 DOI: 10.1002/Cyto.A.22732 |
0.361 |
|
| 2015 |
Jones K, Wockner L, Brennan RM, Keane C, Chattopadhyay PK, Roederer M, Price DA, Cole DK, Hassan B, Beck K, Gottlieb D, Ritchie DS, Seymour JF, Vari F, Crooks P, et al. The impact of HLA-class I and EBV-latency-II antigen-specific CD8(+) T-cells on the pathogenesis of EBV(+) Hodgkin Lymphoma. Clinical and Experimental Immunology. PMID 26422112 DOI: 10.1111/Cei.12716 |
0.355 |
|
| 2015 |
Kvistborg P, Gouttefangeas C, Aghaeepour N, Cazaly A, Chattopadhyay PK, Chan C, Eckl J, Finak G, Hadrup SR, Maecker HT, Maurer D, Mosmann T, Qiu P, Scheuermann RH, Welters MJ, et al. Thinking outside the gate: single-cell assessments in multiple dimensions. Immunity. 42: 591-2. PMID 25902473 DOI: 10.1016/J.Immuni.2015.04.006 |
0.302 |
|
| 2015 |
Chattopadhyay PK, Roederer M. A mine is a terrible thing to waste: high content, single cell technologies for comprehensive immune analysis. American Journal of Transplantation : Official Journal of the American Society of Transplantation and the American Society of Transplant Surgeons. 15: 1155-61. PMID 25708158 DOI: 10.1111/Ajt.13193 |
0.342 |
|
| 2014 |
Chattopadhyay PK, Gierahn TM, Roederer M, Love JC. Single-cell technologies for monitoring immune systems. Nature Immunology. 15: 128-35. PMID 24448570 DOI: 10.1038/Ni.2796 |
0.364 |
|
| 2014 |
Finak G, McDavid A, Chattopadhyay P, Dominguez M, De Rosa S, Roederer M, Gottardo R. Mixture models for single-cell assays with applications to vaccine studies. Biostatistics (Oxford, England). 15: 87-101. PMID 23887981 DOI: 10.1093/Biostatistics/Kxt024 |
0.345 |
|
| 2013 |
Dominguez MH, Chattopadhyay PK, Ma S, Lamoreaux L, McDavid A, Finak G, Gottardo R, Koup RA, Roederer M. Highly multiplexed quantitation of gene expression on single cells. Journal of Immunological Methods. 391: 133-45. PMID 23500781 DOI: 10.1016/J.Jim.2013.03.002 |
0.357 |
|
| 2013 |
Lugli E, Dominguez MH, Gattinoni L, Chattopadhyay PK, Bolton DL, Song K, Klatt NR, Brenchley JM, Vaccari M, Gostick E, Price DA, Waldmann TA, Restifo NP, Franchini G, Roederer M. Superior T memory stem cell persistence supports long-lived T cell memory. The Journal of Clinical Investigation. 123: 594-9. PMID 23281401 DOI: 10.1172/Jci66327 |
0.337 |
|
| 2013 |
Chattopadhyay PK, Chelimo K, Embury PB, Mulama DH, Sumba PO, Gostick E, Ladell K, Brodie TM, Vulule J, Roederer M, Moormann AM, Price DA. Holoendemic malaria exposure is associated with altered Epstein-Barr virus-specific CD8(+) T-cell differentiation. Journal of Virology. 87: 1779-88. PMID 23175378 DOI: 10.1128/Jvi.02158-12 |
0.374 |
|
| 2013 |
Gandhi MK, Brennan RM, Wockner L, Chattopadhyay PK, Roederer M, Price DA, Cole DK, Hassan B, Beck K, Thornton A, Gottlieb D, Ritchie D, Seymour JF, Kumarasinghe G, Burrows SR, et al. HLA-Class I Alleles Impact Susceptibility To EBV+ Classical Hodgkin Lymphoma By Altering EBV Latent Antigen-Specific CD8+ T-Cell Immune Hierarchies Blood. 122: 630-630. DOI: 10.1182/Blood.V122.21.630.630 |
0.354 |
|
| 2012 |
Aghaeepour N, Jalali A, O'Neill K, Chattopadhyay PK, Roederer M, Hoos HH, Brinkman RR. RchyOptimyx: cellular hierarchy optimization for flow cytometry. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 81: 1022-30. PMID 23044634 DOI: 10.1002/Cyto.A.22209 |
0.327 |
|
| 2012 |
Bendall SC, Nolan GP, Roederer M, Chattopadhyay PK. A deep profiler's guide to cytometry. Trends in Immunology. 33: 323-32. PMID 22476049 DOI: 10.1016/J.It.2012.02.010 |
0.38 |
|
| 2012 |
Chattopadhyay PK, Roederer M. Cytometry: today's technology and tomorrow's horizons. Methods (San Diego, Calif.). 57: 251-8. PMID 22391486 DOI: 10.1016/J.Ymeth.2012.02.009 |
0.35 |
|
| 2012 |
Aghaeepour N, Chattopadhyay PK, Ganesan A, O'Neill K, Zare H, Jalali A, Hoos HH, Roederer M, Brinkman RR. Early immunologic correlates of HIV protection can be identified from computational analysis of complex multivariate T-cell flow cytometry assays. Bioinformatics (Oxford, England). 28: 1009-16. PMID 22383736 DOI: 10.1093/Bioinformatics/Bts082 |
0.368 |
|
| 2011 |
Yamamoto T, Price DA, Casazza JP, Ferrari G, Nason M, Chattopadhyay PK, Roederer M, Gostick E, Katsikis PD, Douek DC, Haubrich R, Petrovas C, Koup RA. Surface expression patterns of negative regulatory molecules identify determinants of virus-specific CD8+ T-cell exhaustion in HIV infection. Blood. 117: 4805-15. PMID 21398582 DOI: 10.1182/Blood-2010-11-317297 |
0.361 |
|
| 2010 |
Chattopadhyay PK, Roederer M, Price DA. OMIP-002: Phenotypic analysis of specific human CD8+ T-cells using peptide-MHC class I multimers for any of four epitopes. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 77: 821-2. PMID 20722006 DOI: 10.1002/Cyto.A.20945 |
0.362 |
|
| 2010 |
Chattopadhyay PK, Roederer M. Good cell, bad cell: flow cytometry reveals T-cell subsets important in HIV disease. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 77: 614-22. PMID 20583275 DOI: 10.1002/Cyto.A.20905 |
0.356 |
|
| 2010 |
Perfetto SP, Chattopadhyay PK, Lamoreaux L, Nguyen R, Ambrozak D, Koup RA, Roederer M. Amine-reactive dyes for dead cell discrimination in fixed samples. Current Protocols in Cytometry / Editorial Board, J. Paul Robinson, Managing Editor ... [Et Al.]. Unit 9.34. PMID 20578108 DOI: 10.1002/0471142956.Cy0934S53 |
0.339 |
|
| 2010 |
Freel SA, Lamoreaux L, Chattopadhyay PK, Saunders K, Zarkowsky D, Overman RG, Ochsenbauer C, Edmonds TG, Kappes JC, Cunningham CK, Denny TN, Weinhold KJ, Ferrari G, Haynes BF, Koup RA, et al. Phenotypic and functional profile of HIV-inhibitory CD8 T cells elicited by natural infection and heterologous prime/boost vaccination. Journal of Virology. 84: 4998-5006. PMID 20200250 DOI: 10.1128/Jvi.00138-10 |
0.359 |
|
| 2010 |
Ganesan A, Chattopadhyay PK, Brodie TM, Qin J, Gu W, Mascola JR, Michael NL, Follmann DA, Roederer M. Immunologic and virologic events in early HIV infection predict subsequent rate of progression. The Journal of Infectious Diseases. 201: 272-84. PMID 20001854 DOI: 10.1086/649430 |
0.319 |
|
| 2010 |
Dunleavy K, Chattopadhyay P, Kawada J, Calattini S, Gostick E, Price D, Roderer M, Cohen J, Grant N, Pittaluga S, Janik JE, Jaffe ES, Wilson WH. Immune Characteristics Associated with Lymphomatoid Granulomatosis and Outcome Following Treatment with Interferon-Alpha Blood. 116: 963-963. DOI: 10.1182/Blood.V116.21.963.963 |
0.373 |
|
| 2009 |
Scheinberg P, Melenhorst JJ, Brenchley JM, Hill BJ, Hensel NF, Chattopadhyay PK, Roederer M, Picker LJ, Price DA, Barrett AJ, Douek DC. The transfer of adaptive immunity to CMV during hematopoietic stem cell transplantation is dependent on the specificity and phenotype of CMV-specific T cells in the donor. Blood. 114: 5071-80. PMID 19776383 DOI: 10.1182/Blood-2009-04-214684 |
0.366 |
|
| 2009 |
Asabe S, Wieland SF, Chattopadhyay PK, Roederer M, Engle RE, Purcell RH, Chisari FV. The size of the viral inoculum contributes to the outcome of hepatitis B virus infection. Journal of Virology. 83: 9652-62. PMID 19625407 DOI: 10.1128/Jvi.00867-09 |
0.306 |
|
| 2009 |
Petrovas C, Chaon B, Ambrozak DR, Price DA, Melenhorst JJ, Hill BJ, Geldmacher C, Casazza JP, Chattopadhyay PK, Roederer M, Douek DC, Mueller YM, Jacobson JM, Kulkarni V, Felber BK, et al. Differential association of programmed death-1 and CD57 with ex vivo survival of CD8+ T cells in HIV infection. Journal of Immunology (Baltimore, Md. : 1950). 183: 1120-32. PMID 19564339 DOI: 10.4049/Jimmunol.0900182 |
0.323 |
|
| 2009 |
Price DA, Asher TE, Wilson NA, Nason MC, Brenchley JM, Metzler IS, Venturi V, Gostick E, Chattopadhyay PK, Roederer M, Davenport MP, Watkins DI, Douek DC. Public clonotype usage identifies protective Gag-specific CD8+ T cell responses in SIV infection. The Journal of Experimental Medicine. 206: 923-36. PMID 19349463 DOI: 10.1084/Jem.20081127 |
0.381 |
|
| 2009 |
Melenhorst JJ, Scheinberg P, Chattopadhyay PK, Gostick E, Ladell K, Roederer M, Hensel NF, Douek DC, Barrett AJ, Price DA. High avidity myeloid leukemia-associated antigen-specific CD8+ T cells preferentially reside in the bone marrow. Blood. 113: 2238-44. PMID 18997173 DOI: 10.1182/Blood-2008-04-151969 |
0.37 |
|
| 2009 |
Chattopadhyay PK, Betts MR, Price DA, Gostick E, Horton H, Roederer M, De Rosa SC. The cytolytic enzymes granyzme A, granzyme B, and perforin: expression patterns, cell distribution, and their relationship to cell maturity and bright CD57 expression. Journal of Leukocyte Biology. 85: 88-97. PMID 18820174 DOI: 10.1189/Jlb.0208107 |
0.376 |
|
| 2009 |
Chattopadhyay PK, Brodie T, Ganesan A, Mascola JR, Michael NL, Roederer M. P16-28. The first year: Early correlates of long-term HIV progression Retrovirology. 6. DOI: 10.1186/1742-4690-6-S3-P257 |
0.319 |
|
| 2008 |
Chattopadhyay PK, Hogerkorp CM, Roederer M. A chromatic explosion: the development and future of multiparameter flow cytometry. Immunology. 125: 441-9. PMID 19137647 DOI: 10.1111/J.1365-2567.2008.02989.X |
0.343 |
|
| 2008 |
Chattopadhyay PK, Melenhorst JJ, Ladell K, Gostick E, Scheinberg P, Barrett AJ, Wooldridge L, Roederer M, Sewell AK, Price DA. Techniques to improve the direct ex vivo detection of low frequency antigen-specific CD8+ T cells with peptide-major histocompatibility complex class I tetramers. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 73: 1001-9. PMID 18836993 DOI: 10.1002/Cyto.A.20642 |
0.398 |
|
| 2008 |
Melenhorst JJ, Scheinberg P, Chattopadhyay PK, Lissina A, Gostick E, Cole DK, Wooldridge L, van den Berg HA, Bornstein E, Hensel NF, Douek DC, Roederer M, Sewell AK, Barrett AJ, Price DA. Detection of low avidity CD8(+) T cell populations with coreceptor-enhanced peptide-major histocompatibility complex class I tetramers. Journal of Immunological Methods. 338: 31-9. PMID 18675271 DOI: 10.1016/J.Jim.2008.07.008 |
0.396 |
|
| 2007 |
Melenhorst JJ, Scheinberg P, Chattopadhyay PK, Gostick E, Roederer M, Hensel NF, Douek DC, Barrett AJ, Price DA. High Avidity Leukemia-Associated Antigen-Specific CD8+ T Cells Preferentially Localize to the Bone Marrow in Patients with Myeloid Malignancies. Blood. 110: 2763-2763. DOI: 10.1182/Blood.V110.11.2763.2763 |
0.382 |
|
| 2007 |
Melenhorst JJ, Scheinberg P, Gostick E, Chattopadhyay PK, Lissina A, Cole DK, Roederer M, Bornstein E, Hensel NF, Douek DC, Sewell AK, Barrett AJ, Price DA. Peptide-Major Histocompatibility Complex Class I Tetramers with Enhanced Coreceptor Binding Properties Enable Visualization of Low Avidity Leukemia-Associated Antigen-Specific CD8 + T Cells. Blood. 110: 1343-1343. DOI: 10.1182/Blood.V110.11.1343.1343 |
0.4 |
|
| 2006 |
Chattopadhyay PK, Yu J, Roederer M. Live-cell assay to detect antigen-specific CD4+ T-cell responses by CD154 expression. Nature Protocols. 1: 1-6. PMID 17406204 DOI: 10.1038/Nprot.2006.1 |
0.4 |
|
| 2006 |
Chattopadhyay PK, Price DA, Harper TF, Betts MR, Yu J, Gostick E, Perfetto SP, Goepfert P, Koup RA, De Rosa SC, Bruchez MP, Roederer M. Quantum dot semiconductor nanocrystals for immunophenotyping by polychromatic flow cytometry. Nature Medicine. 12: 972-7. PMID 16862156 DOI: 10.1038/Nm1371 |
0.382 |
|
| 2006 |
Chattopadhyay PK, Douek DC, Gange SJ, Chadwick KR, Hellerstein M, Margolick JB. Longitudinal assessment of de novo T cell production in relation to HIV-associated T cell homeostasis failure. Aids Research and Human Retroviruses. 22: 501-7. PMID 16796525 DOI: 10.1089/Aid.2006.22.501 |
0.531 |
|
| 2006 |
Perfetto SP, Chattopadhyay PK, Lamoreaux L, Nguyen R, Ambrozak D, Koup RA, Roederer M. Amine reactive dyes: an effective tool to discriminate live and dead cells in polychromatic flow cytometry. Journal of Immunological Methods. 313: 199-208. PMID 16756987 DOI: 10.1016/J.Jim.2006.04.007 |
0.354 |
|
| 2005 |
Chattopadhyay PK, Roederer M. Immunophenotyping of T cell subpopulations in HIV disease. Current Protocols in Immunology / Edited by John E. Coligan ... [Et Al.]. Unit 12.12. PMID 18432939 DOI: 10.1002/0471142735.Im1212S65 |
0.373 |
|
| 2005 |
Chattopadhyay PK, Yu J, Roederer M. A live-cell assay to detect antigen-specific CD4+ T cells with diverse cytokine profiles. Nature Medicine. 11: 1113-7. PMID 16186817 DOI: 10.1038/Nm1293 |
0.368 |
|
| 2004 |
Perfetto SP, Chattopadhyay PK, Roederer M. Seventeen-colour flow cytometry: unravelling the immune system. Nature Reviews. Immunology. 4: 648-55. PMID 15286731 DOI: 10.1038/Nri1416 |
0.323 |
|
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