| Year |
Citation |
Score |
| 2023 |
Ren X, Yang H, Nierenberg JL, Sun Y, Chen J, Beaman C, Pham T, Nobuhara M, Takagi MA, Narayan V, Li Y, Ziv E, Shen Y. High-throughput PRIME-editing screens identify functional DNA variants in the human genome. Molecular Cell. 83: 4633-4645.e9. PMID 38134886 DOI: 10.1016/j.molcel.2023.11.021 |
0.34 |
|
| 2023 |
Ren X, Yang H, Nierenberg JL, Sun Y, Chen J, Beaman C, Pham T, Nobuhara M, Takagi MA, Narayan V, Li Y, Ziv E, Shen Y. High throughput PRIME editing screens identify functional DNA variants in the human genome. Biorxiv : the Preprint Server For Biology. PMID 37502948 DOI: 10.1101/2023.07.12.548736 |
0.32 |
|
| 2023 |
Catta-Preta R, Lindtner S, Ypsilanti A, Price J, Abnousi A, Su-Feher L, Wang Y, Juric I, Jones IR, Akiyama JA, Hu M, Shen Y, Visel A, Pennacchio LA, Dickel D, et al. Combinatorial transcription factor binding encodes cis-regulatory wiring of forebrain GABAergic neurogenesis. Biorxiv : the Preprint Server For Biology. PMID 37425940 DOI: 10.1101/2023.06.28.546894 |
0.362 |
|
| 2023 |
Dekker J, Alber F, Aufmkolk S, Beliveau BJ, Bruneau BG, Belmont AS, Bintu L, Boettiger A, Calandrelli R, Disteche CM, Gilbert DM, Gregor T, Hansen AS, Huang B, Huangfu D, ... ... Shen Y, et al. Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project. Molecular Cell. PMID 37419111 DOI: 10.1016/j.molcel.2023.06.018 |
0.558 |
|
| 2023 |
Ren X, Takagi MA, Shen Y. Efficient bi-allelic tagging in human induced pluripotent stem cells using CRISPR. Star Protocols. 4: 102084. PMID 36853689 DOI: 10.1016/j.xpro.2023.102084 |
0.342 |
|
| 2022 |
Wu D, Poddar A, Ninou E, Hwang E, Cole MA, Liu SJ, Horlbeck MA, Chen J, Replogle JM, Carosso GA, Eng NWL, Chang J, Shen Y, Weissman JS, Lim DA. Dual genome-wide coding and lncRNA screens in neural induction of induced pluripotent stem cells. Cell Genomics. 2. PMID 36381608 DOI: 10.1016/j.xgen.2022.100177 |
0.363 |
|
| 2022 |
Jones IR, Ren X, Shen Y. High throughput CRISPRi and CRISPRa technologies in 3D genome regulation for neuropsychiatric diseases. Human Molecular Genetics. PMID 35972825 DOI: 10.1093/hmg/ddac193 |
0.323 |
|
| 2022 |
Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, Shen Y, et al. Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. PMID 35474001 DOI: 10.1038/s41586-021-04226-3 |
0.563 |
|
| 2021 |
Li YE, Preissl S, Hou X, Zhang Z, Zhang K, Qiu Y, Poirion OB, Li B, Chiou J, Liu H, Pinto-Duarte A, Kubo N, Yang X, Fang R, Wang X, ... ... Shen Y, et al. An atlas of gene regulatory elements in adult mouse cerebrum. Nature. 598: 129-136. PMID 34616068 DOI: 10.1038/s41586-021-03604-1 |
0.612 |
|
| 2021 |
Ren X, Wang M, Li B, Jamieson K, Zheng L, Jones IR, Li B, Takagi MA, Lee J, Maliskova L, Tam TW, Yu M, Hu R, Lee L, Abnousi A, ... ... Shen Y, et al. Parallel characterization of cis-regulatory elements for multiple genes using CRISPRpath. Science Advances. 7: eabi4360. PMID 34524848 DOI: 10.1126/sciadv.abi4360 |
0.459 |
|
| 2021 |
Ushiki A, Zhang Y, Xiong C, Zhao J, Georgakopoulos-Soares I, Kane L, Jamieson K, Bamshad MJ, Nickerson DA, Shen Y, Lettice LA, Silveira-Lucas EL, Petit F, Ahituv N. Deletion of CTCF sites in the SHH locus alters enhancer-promoter interactions and leads to acheiropodia. Nature Communications. 12: 2282. PMID 33863876 DOI: 10.1038/s41467-021-22470-z |
0.369 |
|
| 2021 |
Shen Y, Chen LL, Gao J. CharPlant: A De Novo Open Chromatin Region Prediction Tool for Plant Genomes. Genomics, Proteomics & Bioinformatics. PMID 33662624 DOI: 10.1016/j.gpb.2020.06.021 |
0.41 |
|
| 2021 |
Gorkin DU, Barozzi I, Zhao Y, Zhang Y, Huang H, Lee AY, Li B, Chiou J, Wildberg A, Ding B, Zhang B, Wang M, Strattan JS, Davidson JM, Qiu Y, ... Shen Y, et al. Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development. Nature. PMID 33398137 DOI: 10.1038/s41586-020-03089-4 |
0.426 |
|
| 2020 |
Song M, Pebworth MP, Yang X, Abnousi A, Fan C, Wen J, Rosen JD, Choudhary MNK, Cui X, Jones IR, Bergenholtz S, Eze UC, Juric I, Li B, Maliskova L, ... ... Shen Y, et al. Cell-type-specific 3D epigenomes in the developing human cortex. Nature. PMID 33057195 DOI: 10.1038/s41586-020-2825-4 |
0.401 |
|
| 2020 |
Gorkin DU, Barozzi I, Zhao Y, Zhang Y, Huang H, Lee AY, Li B, Chiou J, Wildberg A, Ding B, Zhang B, Wang M, Strattan JS, Davidson JM, Qiu Y, ... Shen Y, et al. Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development. Nature. PMID 33037424 DOI: 10.1038/s41586-020-2841-4 |
0.403 |
|
| 2020 |
Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, ... Shen Y, et al. Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. 583: 699-710. PMID 32728249 DOI: 10.1038/S41586-020-2493-4 |
0.66 |
|
| 2020 |
Gorkin DU, Barozzi I, Zhao Y, Zhang Y, Huang H, Lee AY, Li B, Chiou J, Wildberg A, Ding B, Zhang B, Wang M, Strattan JS, Davidson JM, Qiu Y, ... ... Shen Y, et al. An atlas of dynamic chromatin landscapes in mouse fetal development. Nature. 583: 744-751. PMID 32728240 DOI: 10.1038/S41586-020-2093-3 |
0.638 |
|
| 2020 |
Yang Y, Li G, Qian H, Wilhelmsen KC, Shen Y, Li Y. SMNN: batch effect correction for single-cell RNA-seq data via supervised mutual nearest neighbor detection. Briefings in Bioinformatics. PMID 32591778 DOI: 10.1093/Bib/Bbaa097 |
0.346 |
|
| 2020 |
Yang X, Bergenholtz S, Maliskova L, Pebworth MP, Kriegstein AR, Li Y, Shen Y. SMART-Q: An Integrative Pipeline Quantifying Cell Type-Specific RNA Transcription. Plos One. 15: e0228760. PMID 32348304 DOI: 10.1371/Journal.Pone.0228760 |
0.378 |
|
| 2020 |
Sturtevant D, Lu S, Zhou ZW, Shen Y, Wang S, Song JM, Zhong J, Burks DJ, Yang ZQ, Yang QY, Cannon AE, Herrfurth C, Feussner I, Borisjuk L, Munz E, et al. The genome of jojoba (): A taxonomically isolated species that directs wax ester accumulation in its seeds. Science Advances. 6: eaay3240. PMID 32195345 DOI: 10.1126/Sciadv.Aay3240 |
0.323 |
|
| 2019 |
Song M, Yang X, Ren X, Maliskova L, Li B, Jones IR, Wang C, Jacob F, Wu K, Traglia M, Tam TW, Jamieson K, Lu SY, Ming GL, Li Y, ... Shen Y, et al. Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes. Nature Genetics. 51: 1252-1262. PMID 31367015 DOI: 10.1038/S41588-019-0472-1 |
0.717 |
|
| 2019 |
Alexander JM, Guan J, Li B, Maliskova L, Song M, Shen Y, Huang B, Lomvardas S, Weiner OD. Live-cell imaging reveals enhancer-dependent transcription in the absence of enhancer proximity. Elife. 8. PMID 31124784 DOI: 10.7554/Elife.41769 |
0.436 |
|
| 2019 |
Alexander JM, Guan J, Li B, Maliskova L, Song M, Shen Y, Huang B, Lomvardas S, Weiner OD. Author response: Live-cell imaging reveals enhancer-dependent Sox2 transcription in the absence of enhancer proximity Elife. DOI: 10.7554/Elife.41769.054 |
0.328 |
|
| 2018 |
Li Y, Hu M, Shen Y. Gene Regulation in the 3D Genome. Human Molecular Genetics. PMID 29767704 DOI: 10.1093/Hmg/Ddy164 |
0.518 |
|
| 2017 |
Emmerson E, May A, Nathan S, Cruz Pacheco N, Lizama CO, Maliskova L, Zovein AC, Shen Y, Muench MO, Knox SM. SOX2 regulates acinar cell development in the salivary gland. Elife. 6. PMID 28623666 DOI: 10.7554/Elife.26620 |
0.391 |
|
| 2017 |
Diao Y, Fang R, Li B, Meng Z, Yu J, Qiu Y, Lin KC, Huang H, Liu T, Marina RJ, Jung I, Shen Y, Guan KL, Ren B. A tiling-deletion-based genetic screen for cis-regulatory element identification in mammalian cells. Nature Methods. PMID 28417999 DOI: 10.1038/Nmeth.4264 |
0.772 |
|
| 2017 |
He Y, Gorkin DU, Dickel DE, Nery JR, Castanon RG, Lee AY, Shen Y, Visel A, Pennacchio LA, Ren B, Ecker JR. Improved regulatory element prediction based on tissue-specific local epigenomic signatures. Proceedings of the National Academy of Sciences of the United States of America. PMID 28193886 DOI: 10.1073/Pnas.1618353114 |
0.63 |
|
| 2017 |
Emmerson E, May AJ, Nathan S, Cruz-Pacheco N, Lizama CO, Maliskova L, Zovein AC, Shen Y, Muench MO, Knox SM. Author response: SOX2 regulates acinar cell development in the salivary gland Elife. DOI: 10.7554/Elife.26620.041 |
0.327 |
|
| 2016 |
Diao Y, Li B, Meng Z, Jung I, Lee A, Dixon J, Maliskova L, Guan KL, Shen Y, Ren B. A new class of temporarily phenotypic enhancers identified by CRISPR/Cas9 mediated genetic screening. Genome Research. PMID 26813977 DOI: 10.1101/Gr.197152.115 |
0.789 |
|
| 2015 |
Dixon JR, Jung I, Selvaraj S, Shen Y, Antosiewicz-Bourget JE, Lee AY, Ye Z, Kim A, Rajagopal N, Xie W, Diao Y, Liang J, Zhao H, Lobanenkov VV, Ecker JR, et al. Chromatin architecture reorganization during stem cell differentiation. Nature. 518: 331-6. PMID 25693564 DOI: 10.1038/Nature14222 |
0.774 |
|
| 2015 |
Yue F, Shen Y, Ye Z, Ren B. Abstract 2211: A comparative analysis of the cis-regulatory landscape between human and mouse Cancer Research. 75: 2211-2211. DOI: 10.1158/1538-7445.Am2015-2211 |
0.692 |
|
| 2014 |
Yue F, Cheng Y, Breschi A, Vierstra J, Wu W, Ryba T, Sandstrom R, Ma Z, Davis C, Pope BD, Shen Y, Pervouchine DD, Djebali S, Thurman RE, Kaul R, et al. A comparative encyclopedia of DNA elements in the mouse genome. Nature. 515: 355-64. PMID 25409824 DOI: 10.1038/Nature13992 |
0.757 |
|
| 2014 |
Huang K, Shen Y, Xue Z, Bibikova M, April C, Liu Z, Cheng L, Nagy A, Pellegrini M, Fan JB, Fan G. A panel of CpG methylation sites distinguishes human embryonic stem cells and induced pluripotent stem cells. Stem Cell Reports. 2: 36-43. PMID 24511466 DOI: 10.1016/J.Stemcr.2013.11.003 |
0.417 |
|
| 2013 |
Hon GC, Rajagopal N, Shen Y, McCleary DF, Yue F, Dang MD, Ren B. Epigenetic memory at embryonic enhancers identified in DNA methylation maps from adult mouse tissues. Nature Genetics. 45: 1198-206. PMID 23995138 DOI: 10.1038/Ng.2746 |
0.755 |
|
| 2013 |
Hon GC, Shen Y, McCleary DF, Edsall L, Kuan S, Ren B. Abstract 1111: Whole genome bisulfite sequencing reveals tissue-specific DNA methylation in a normal mouse. Cancer Research. 73: 1111-1111. DOI: 10.1158/1538-7445.Am2013-1111 |
0.756 |
|
| 2012 |
Stamatoyannopoulos JA, Snyder M, Hardison R, Ren B, Gingeras T, Gilbert DM, Groudine M, Bender M, Kaul R, Canfield T, Giste E, Johnson A, Zhang M, Balasundaram G, ... ... Shen Y, et al. An encyclopedia of mouse DNA elements (Mouse ENCODE). Genome Biology. 13: 418. PMID 22889292 DOI: 10.1186/Gb-2012-13-8-418 |
0.706 |
|
| 2012 |
Shen Y, Yue F, McCleary DF, Ye Z, Edsall L, Kuan S, Wagner U, Dixon J, Lee L, Lobanenkov VV, Ren B. A map of the cis-regulatory sequences in the mouse genome. Nature. 488: 116-20. PMID 22763441 DOI: 10.1038/Nature11243 |
0.791 |
|
| 2012 |
Yu M, Hon GC, Szulwach KE, Song CX, Zhang L, Kim A, Li X, Dai Q, Shen Y, Park B, Min JH, Jin P, Ren B, He C. Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome. Cell. 149: 1368-80. PMID 22608086 DOI: 10.1016/J.Cell.2012.04.027 |
0.746 |
|
| 2012 |
Dixon JR, Selvaraj S, Yue F, Kim A, Li Y, Shen Y, Hu M, Liu JS, Ren B. Topological domains in mammalian genomes identified by analysis of chromatin interactions. Nature. 485: 376-80. PMID 22495300 DOI: 10.1038/Nature11082 |
0.764 |
|
| 2012 |
Hunkapiller J, Shen Y, Diaz A, Cagney G, McCleary D, Ramalho-Santos M, Krogan N, Ren B, Song JS, Reiter JF. Polycomb-like 3 promotes polycomb repressive complex 2 binding to CpG islands and embryonic stem cell self-renewal. Plos Genetics. 8: e1002576. PMID 22438827 DOI: 10.1371/Journal.Pgen.1002576 |
0.586 |
|
| 2011 |
Wang A, Huang K, Shen Y, Xue Z, Cai C, Horvath S, Fan G. Functional modules distinguish human induced pluripotent stem cells from embryonic stem cells. Stem Cells and Development. 20: 1937-50. PMID 21542696 DOI: 10.1089/Scd.2010.0574 |
0.445 |
|
| 2009 |
Shen Y, Fouse SD, Fan G. Genome-wide DNA methylation profiling: the mDIP-chip technology. Methods in Molecular Biology (Clifton, N.J.). 568: 203-16. PMID 19582429 DOI: 10.1007/978-1-59745-280-9_13 |
0.48 |
|
| 2008 |
Fouse SD, Shen Y, Pellegrini M, Cole S, Meissner A, Van Neste L, Jaenisch R, Fan G. Promoter CpG methylation contributes to ES cell gene regulation in parallel with Oct4/Nanog, PcG complex, and histone H3 K4/K27 trimethylation. Cell Stem Cell. 2: 160-9. PMID 18371437 DOI: 10.1016/J.Stem.2007.12.011 |
0.51 |
|
| 2008 |
Shen Y, Matsuno Y, Fouse SD, Rao N, Root S, Xu R, Pellegrini M, Riggs AD, Fan G. X-inactivation in female human embryonic stem cells is in a nonrandom pattern and prone to epigenetic alterations. Proceedings of the National Academy of Sciences of the United States of America. 105: 4709-14. PMID 18339804 DOI: 10.1073/Pnas.0712018105 |
0.376 |
|
| 2006 |
Shen Y, Chow J, Wang Z, Fan G. Abnormal CpG island methylation occurs during in vitro differentiation of human embryonic stem cells. Human Molecular Genetics. 15: 2623-35. PMID 16870691 DOI: 10.1093/Hmg/Ddl188 |
0.447 |
|
| 2005 |
Fan G, Martinowich K, Chin MH, He F, Fouse SD, Hutnick L, Hattori D, Ge W, Shen Y, Wu H, ten Hoeve J, Shuai K, Sun YE. DNA methylation controls the timing of astrogliogenesis through regulation of JAK-STAT signaling. Development (Cambridge, England). 132: 3345-56. PMID 16014513 DOI: 10.1242/Dev.01912 |
0.437 |
|
| 1997 |
Huq AH, Sutcliffe JS, Nakao M, Shen Y, Gibbs RA, Beaudet AL. Sequencing and functional analysis of the SNRPN promoter: in vitro methylation abolishes promoter activity. Genome Research. 7: 642-8. PMID 9199937 DOI: 10.1101/Gr.7.6.642 |
0.378 |
|
| 1995 |
Timms KM, Lu F, Shen Y, Pierson CA, Muzny DM, Gu Y, Nelson DL, Gibbs RA. 130 kb of DNA sequence reveals two new genes and a regional duplication distal to the human iduronate-2-sulfate sulfatase locus. Genome Research. 5: 71-8. PMID 8717057 DOI: 10.1101/Gr.5.1.71 |
0.321 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2019 |
Zhan L, Krabbe G, Du F, Jones I, Reichert MC, Telpoukhovskaia M, Kodama L, Wang C, Cho SH, Sayed F, Li Y, Le D, Zhou Y, Shen Y, West B, et al. Proximal recolonization by self-renewing microglia re-establishes microglial homeostasis in the adult mouse brain. Plos Biology. 17: e3000134. PMID 30735499 DOI: 10.1371/Journal.Pbio.3000134 |
0.297 |
|
| 2021 |
Ypsilanti AR, Pattabiraman K, Catta-Preta R, Golonzhka O, Lindtner S, Tang K, Jones IR, Abnousi A, Juric I, Hu M, Shen Y, Dickel DE, Visel A, Pennachio LA, Hawrylycz M, et al. Transcriptional network orchestrating regional patterning of cortical progenitors. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34921112 DOI: 10.1073/pnas.2024795118 |
0.289 |
|
| 2021 |
Rosen JD, Yang Y, Abnousi A, Chen J, Song M, Jones IR, Shen Y, Hu M, Li Y. HPRep: Quantifying Reproducibility in HiChIP and PLAC-Seq Datasets. Current Issues in Molecular Biology. 43: 1156-1170. PMID 34563051 DOI: 10.3390/cimb43020082 |
0.286 |
|
| 2023 |
Zheng Y, Zhao C, Song Q, Xu L, Zhang B, Hu G, Kong X, Li S, Li X, Shen Y, Zhuang L, Wu M, Liu Y, Zhou Y. Histone methylation mediated by NSD1 is required for the establishment and maintenance of neuronal identities. Cell Reports. 42: 113496. PMID 37995181 DOI: 10.1016/j.celrep.2023.113496 |
0.276 |
|
| 2022 |
Shen Y, Zhong Q, Liu T, Wen Z, Shen W, Li L. CharID: a two-step model for universal prediction of interactions between chromatin accessible regions. Briefings in Bioinformatics. PMID 35077535 DOI: 10.1093/bib/bbab602 |
0.272 |
|
| 2020 |
Silvestre-Ryan J, Wang Y, Sharma M, Lin S, Shen Y, Dider S, Holmes I. Machine Boss: Rapid Prototyping of Bioinformatic Automata. Bioinformatics (Oxford, England). PMID 32683444 DOI: 10.1093/Bioinformatics/Btaa633 |
0.268 |
|
| 2023 |
Yang X, Wen J, Yang H, Jones IR, Zhu X, Liu W, Li B, Clelland CD, Luo W, Wong MY, Ren X, Cui X, Song M, Liu H, Chen C, ... ... Shen Y, et al. Functional characterization of Alzheimer's disease genetic variants in microglia. Nature Genetics. PMID 37735198 DOI: 10.1038/s41588-023-01506-8 |
0.243 |
|
| 1996 |
Shen Y, Igo M, Yalamanchili P, Berk AJ, Dasgupta A. DNA binding domain and subunit interactions of transcription factor IIIC revealed by dissection with poliovirus 3C protease Molecular and Cellular Biology. 16: 4163-4171. PMID 8754815 DOI: 10.1128/Mcb.16.8.4163 |
0.237 |
|
| 2020 |
Dan H, Li T, Lei X, Huang X, Xing Y, Shen Y. Whole exome sequencing of a family revealed a novel variant in the CHM gene, c.22delG p.(Glu8Serfs*4), which co-segregated with choroideremia. Bioscience Reports. PMID 32364220 DOI: 10.1042/BSR20200067 |
0.233 |
|
| 2021 |
Li Y, Shen Y, Cai D, Shen Y. Sox2 Knockdown in the Neonatal Retina Causes Cell Fate to Switch from Amacrine to Bipolar. Brain Research. 147265. PMID 33422527 DOI: 10.1016/j.brainres.2020.147265 |
0.224 |
|
| 2019 |
Huh R, Yang Y, Jiang Y, Shen Y, Li Y. SAME-clustering: Single-cell Aggregated Clustering via Mixture Model Ensemble. Nucleic Acids Research. PMID 31777938 DOI: 10.1093/Nar/Gkz959 |
0.223 |
|
| 2021 |
Wang X, Jiang W, Luo S, Yang X, Wang C, Wang B, Dang Y, Shen Y, Ma DK. The C. elegans homolog of human panic-disorder risk gene TMEM132D orchestrates neuronal morphogenesis through the WAVE-regulatory complex. Molecular Brain. 14: 54. PMID 33726789 DOI: 10.1186/s13041-021-00767-w |
0.213 |
|
| 2022 |
Ravichandran M, Hu J, Cai C, Ward NP, Venida A, Foakes C, Kuljanin M, Yang A, Hennessey CJ, Yang Y, Desousa BR, Rademaker G, Staes AAL, Cakir Z, Jain IH, ... ... Shen Y, et al. Coordinated transcriptional and catabolic programs support iron dependent adaptation to RAS-MAPK pathway inhibition in pancreatic cancer. Cancer Discovery. PMID 35771494 DOI: 10.1158/2159-8290.CD-22-0044 |
0.211 |
|
| 1998 |
Shen Y, Kassavetis GA, Bryant GO, Berk AJ. Polymerase (Pol) III TATA box-binding protein (TBP)-associated factor Brf binds to a surface on tbp also required for activated Pol II transcription Molecular and Cellular Biology. 18: 1692-1700. PMID 9488486 DOI: 10.1128/Mcb.18.3.1692 |
0.204 |
|
| 1993 |
Voordouw G, Shen Y, Harrington CS, Telang AJ, Jack TR, Westlake DW. Quantitative reverse sample genome probing of microbial communities and its application to oil field production waters. Applied and Environmental Microbiology. 59: 4101-14. PMID 16349111 DOI: 10.1128/AEM.59.12.4101-4114.1993 |
0.201 |
|
| 2022 |
Yang H, Ting X, Geng YH, Xie Y, Nierenberg JL, Huo YF, Zhou YT, Huang Y, Yu YQ, Yu XY, Li XF, Ziv E, Zhang H, Fang WG, Shen Y, et al. The risk variant rs11836367 contributes to breast cancer onset and metastasis by attenuating Wnt signaling via regulating expression. Science Advances. 8: eabn3509. PMID 35687692 DOI: 10.1126/sciadv.abn3509 |
0.198 |
|
| 2022 |
Rowland B, Huh R, Hou Z, Crowley C, Wen J, Shen Y, Hu M, Giusti-Rodríguez P, Sullivan PF, Li Y. THUNDER: A reference-free deconvolution method to infer cell type proportions from bulk Hi-C data. Plos Genetics. 18: e1010102. PMID 35259165 DOI: 10.1371/journal.pgen.1010102 |
0.194 |
|
| 2020 |
Xiao D, Deng Q, Guo Y, Huang X, Zou M, Zhong J, Rao P, Xu Z, Liu Y, Hu Y, Shen Y, Jin K, Xiang M. Generation of self-organized sensory ganglion organoids and retinal ganglion cells from fibroblasts. Science Advances. 6: eaaz5858. PMID 32523990 DOI: 10.1126/Sciadv.Aaz5858 |
0.187 |
|
| 2021 |
Wu M, Deng Q, Lei X, Du Y, Shen Y. Elavl2 Regulates Retinal Function Via Modulating the Differentiation of Amacrine Cells Subtype. Investigative Ophthalmology & Visual Science. 62: 1. PMID 34061953 DOI: 10.1167/iovs.62.7.1 |
0.186 |
|
| 2019 |
Chang JW, Ding Y, Tahir Ul Qamar M, Shen Y, Gao J, Chen LL. A deep learning model based on sparse auto-encoder for prioritizing cancer-related genes and drug target combinations. Carcinogenesis. PMID 30944926 DOI: 10.1093/carcin/bgz044 |
0.184 |
|
| 2014 |
Li Z, He T, Du K, Xing YQ, Run YM, Yan Y, Shen Y. Inhibition of oxygen-induced ischemic retinal neovascularization with adenoviral 15-lipoxygenase-1 gene transfer via up-regulation of PPAR-γ and down-regulation of VEGFR-2 expression. Plos One. 9: e85824. PMID 24465728 DOI: 10.1371/Journal.Pone.0085824 |
0.166 |
|
| 2019 |
Shen Y, Luo X, Liu S, Shen Y, Nawy S, Shen Y. Rod bipolar cells dysfunction occurs before ganglion cells loss in excitotoxin-damaged mouse retina. Cell Death & Disease. 10: 905. PMID 31787761 DOI: 10.1038/s41419-019-2140-x |
0.165 |
|
| 2012 |
Peachey NS, Pearring JN, Bojang P, Hirschtritt ME, Sturgill-Short G, Ray TA, Furukawa T, Koike C, Goldberg AF, Shen Y, McCall MA, Nawy S, Nishina PM, Gregg RG. Depolarizing bipolar cell dysfunction due to a Trpm1 point mutation. Journal of Neurophysiology. 108: 2442-51. PMID 22896717 DOI: 10.1152/Jn.00137.2012 |
0.164 |
|
| 2003 |
Butler JM, Shen Y, McCord BR. The development of reduced size STR amplicons as tools for analysis of degraded DNA. Journal of Forensic Sciences. 48: 1054-64. PMID 14535668 |
0.156 |
|
| 2007 |
Huang J, Yang X, Wang MM, Tang HJ, Ding LY, Shen Y, Zhang HS. A novel rice C2H2-type zinc finger protein lacking DLN-box/EAR-motif plays a role in salt tolerance. Biochimica Et Biophysica Acta. 1769: 220-7. PMID 17434609 DOI: 10.1016/j.bbaexp.2007.02.006 |
0.154 |
|
| 2021 |
Zhao Q, Kong Y, Kittredge A, Li Y, Shen Y, Zhang Y, Tsang SH, Yang T. Distinct expression requirements and rescue strategies for loss- and gain-of-function mutations. Elife. 10. PMID 34061021 DOI: 10.7554/eLife.67622 |
0.154 |
|
| 2011 |
Nykiforuk CL, Shen Y, Murray EW, Boothe JG, Busseuil D, Rhéaume E, Tardif JC, Reid A, Moloney MM. Expression and recovery of biologically active recombinant Apolipoprotein AI(Milano) from transgenic safflower (Carthamus tinctorius) seeds. Plant Biotechnology Journal. 9: 250-63. PMID 20618764 DOI: 10.1111/J.1467-7652.2010.00546.X |
0.154 |
|
| 2020 |
Dan H, Huang X, Xing Y, Shen Y. Application of targeted panel sequencing and whole exome sequencing for 76 Chinese families with retinitis pigmentosa. Molecular Genetics & Genomic Medicine. e1131. PMID 31960602 DOI: 10.1002/mgg3.1131 |
0.143 |
|
| 1996 |
Shen Y, Rattan V, Sultana C, Kalra VK. Cigarette smoke condensate-induced adhesion molecule expression and transendothelial migration of monocytes American Journal of Physiology - Heart and Circulatory Physiology. 270: H1624-H1633. PMID 8928867 DOI: 10.1152/Ajpheart.1996.270.5.H1624 |
0.141 |
|
| 2019 |
Gao Q, Liu Y, Lei X, Deng Q, Tong Y, Du L, Shen Y. A Novel CNGA1 Gene Mutation (c.G622A) of Autosomal Recessive Retinitis Pigmentosa Leads to the CNGA1 Protein Reduction on Membrane. Biochemical Genetics. PMID 30652268 DOI: 10.1007/S10528-019-09907-3 |
0.138 |
|
| 2003 |
Shen Y, Zhang AJ, Yang XL. Uncoupling of horizontal cells alters the receptive fields of retinal bipolar cells. Neuroreport. 14: 2159-62. PMID 14625439 DOI: 10.1097/00001756-200312020-00005 |
0.137 |
|
| 2023 |
Yan F, Liu Y, Zhang T, Shen Y. Identifying TNF and IL6 as potential hub genes and targeted drugs associated with scleritis: A bio-informative report. Frontiers in Immunology. 14: 1098140. PMID 37063831 DOI: 10.3389/fimmu.2023.1098140 |
0.136 |
|
| 2022 |
Jin J, Liang L, Jin K, Zhang HJ, Liu R, Shen Y. Associations Between Fundus Types and Clinical Manifestations in Patients with RDH12 Gene Mutations. Brain Topography. PMID 35006499 DOI: 10.1007/s10548-021-00885-7 |
0.125 |
|
| 2021 |
Liu D, Deng Q, Lei X, Lu W, Zhao Q, Shen Y. Overexpression of BMP4 protects retinal ganglion cells in a mouse model of experimental glaucoma. Experimental Eye Research. 108728. PMID 34390734 DOI: 10.1016/j.exer.2021.108728 |
0.12 |
|
| 2015 |
Gao J, Yin F, Liu M, Luo M, Qin C, Yang A, Yang S, Zhang Z, Shen Y, Lin H, Pan G. Identification and characterisation of tobacco microRNA transcriptome using high-throughput sequencing. Plant Biology (Stuttgart, Germany). 17: 591-8. PMID 25287651 DOI: 10.1111/plb.12275 |
0.119 |
|
| 2012 |
Li Z, He T, Du K, Xing YQ, Yan Y, Chen Z, Zhang H, Shen Y. Overexpression of 15-lipoxygenase-1 in oxygen-induced ischemic retinopathy inhibits retinal neovascularization via downregulation of vascular endothelial growth factor-A expression. Molecular Vision. 18: 2847-59. PMID 23233787 |
0.117 |
|
| 2013 |
Fan W, Xing Y, Zhong Y, Chen C, Shen Y. Expression of NMDA receptor subunit 1 in the rat retina. Acta Histochemica. 115: 42-7. PMID 22512920 DOI: 10.1016/J.Acthis.2012.03.005 |
0.114 |
|
| 2011 |
Pearring JN, Bojang P, Shen Y, Koike C, Furukawa T, Nawy S, Gregg RG. A role for nyctalopin, a small leucine-rich repeat protein, in localizing the TRP melastatin 1 channel to retinal depolarizing bipolar cell dendrites. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 10060-6. PMID 21734298 DOI: 10.1523/Jneurosci.1014-11.2011 |
0.113 |
|
| 2013 |
Shen Y, Hu G, Zhang H, Qi L, Luo C. Recent Progress in pH-Sensitive Gene Carriers Acta Chimica Sinica. 71: 323. DOI: 10.6023/A12110974 |
0.113 |
|
| 2010 |
Boothe J, Nykiforuk C, Shen Y, Zaplachinski S, Szarka S, Kuhlman P, Murray E, Morck D, Moloney MM. Seed-based expression systems for plant molecular farming. Plant Biotechnology Journal. 8: 588-606. PMID 20500681 DOI: 10.1111/J.1467-7652.2010.00511.X |
0.112 |
|
| 2008 |
Snellman J, Kaur T, Shen Y, Nawy S. Regulation of ON bipolar cell activity. Progress in Retinal and Eye Research. 27: 450-63. PMID 18524666 DOI: 10.1016/J.Preteyeres.2008.03.003 |
0.109 |
|
| 2006 |
Shen Y, Zhang M, Jin Y, Yang XL. Functional N-methyl-D-aspartate receptors are expressed in cone-driven horizontal cells in carp retina. Neuro-Signals. 15: 174-9. PMID 17047395 DOI: 10.1159/000096350 |
0.108 |
|
| 2023 |
Liu Y, Xia P, Yan F, Yuan M, Yuan H, Du Y, Yan J, Song Q, Zhang T, Hu D, Shen Y. Engineered Extracellular Vesicles for Delivery of an IL-1 Receptor Antagonist Promote Targeted Repair of Retinal Degeneration. Small (Weinheim An Der Bergstrasse, Germany). e2302962. PMID 37518765 DOI: 10.1002/smll.202302962 |
0.108 |
|
| 2016 |
Shen Y, Zhao HY, Wang HJ, Wang WL, Zhang LZ, Fu R. Ischemic preconditioning inhibits over-expression of arginyl-tRNA synthetase gene Rars in ischemia-injured neurons. Journal of Huazhong University of Science and Technology. Medical Sciences = Hua Zhong Ke Ji Da Xue Xue Bao. Yi Xue Ying De Wen Ban = Huazhong Keji Daxue Xuebao. Yixue Yingdewen Ban. 36: 554-7. PMID 27465332 DOI: 10.1007/s11596-016-1624-5 |
0.106 |
|
| 2018 |
Sun Y, Man J, Wan Y, Pan G, Du L, Li L, Yang Y, Qiu L, Gao Q, Dan H, Mao L, Cheng Z, Fan C, Yu J, Lin M, ... ... Shen Y, et al. Targeted next-generation sequencing as a comprehensive test for Mendelian diseases: a cohort diagnostic study. Scientific Reports. 8: 11646. PMID 30076350 DOI: 10.1038/s41598-018-30151-z |
0.106 |
|
| 2021 |
Huang X, Tong Y, Qi CX, Xu YT, Dan HD, Deng QQ, Shen Y. Mapping Regional Homogeneity and Functional Connectivity of the Visual Cortex in Resting-State fMRI. Journal of Visualized Experiments : Jove. PMID 34487114 DOI: 10.3791/60305 |
0.102 |
|
| 2020 |
Li B, Zhang D, Shen Y. Study on terahertz spectrum analysis and recognition modeling of common agricultural diseases. Spectrochimica Acta. Part a, Molecular and Biomolecular Spectroscopy. 243: 118820. PMID 32829161 DOI: 10.1016/j.saa.2020.118820 |
0.1 |
|
| 2015 |
Chen XL, Xu YY, Chen L, Wang GL, Shen Y. TLR3 Plays Significant Roles against HBV-Associated HCC. Gastroenterology Research and Practice. 2015: 572171. PMID 25983748 DOI: 10.1155/2015/572171 |
0.098 |
|
| 1996 |
Voordouw G, Armstrong SM, Reimer MF, Fouts B, Telang AJ, Shen Y, Gevertz D. Characterization of 16S rRNA genes from oil field microbial communities indicates the presence of a variety of sulfate-reducing, fermentative, and sulfide-oxidizing bacteria. Applied and Environmental Microbiology. 62: 1623-9. PMID 8633860 DOI: 10.1128/Aem.62.5.1623-1629.1996 |
0.095 |
|
| 2022 |
Sun W, Wang N, Liu H, Yu B, Jin L, Ren X, Shen Y, Wang L. Genetically encoded chemical crosslinking of RNA in vivo. Nature Chemistry. PMID 36202986 DOI: 10.1038/s41557-022-01038-4 |
0.095 |
|
| 2018 |
Liu S, Chen Y, Chen Z, Xing Y, Shen Y. Immunohistochemical profile of long-standing traumatic retinal detachment in atrophic globe in a young patient. Experimental and Therapeutic Medicine. 16: 2387-2391. PMID 30186481 DOI: 10.3892/Etm.2018.6497 |
0.094 |
|
| 2024 |
Gao Y, Qi Y, Shen Y, Zhang Y, Wang D, Su M, Liu X, Wang A, Zhang W, He C, Yang J, Dai M, Wang H, Cai H. Signatures of tumor-associated macrophages correlate with treatment response in ovarian cancer patients. Aging. 15. PMID 38175687 DOI: 10.18632/aging.205362 |
0.092 |
|
| 2022 |
Zhou L, Chen L, Chen S, Pu Z, Gu M, Shen Y. Highly Efficient Photodynamic Therapy with Mitochondria-Targeting Aggregation-Induced Emission Photosensitizer for Retinoblastoma. Advanced Healthcare Materials. e2202219. PMID 36271734 DOI: 10.1002/adhm.202202219 |
0.092 |
|
| 2013 |
Yan Y, He T, Shen Y, Chen X, Diao B, Li Z, Zhou F, Xing YQ. Modeling of diseases of retinal ischemia in vitro: possible participation of autocrine vascular endothelial growth factor signaling. Ophthalmic Research. 49: 90-9. PMID 23257772 DOI: 10.1159/000343254 |
0.092 |
|
| 2006 |
Shen Y, Liu XL, Yang XL. N-methyl-D-aspartate receptors in the retina. Molecular Neurobiology. 34: 163-79. PMID 17308350 DOI: 10.1385/Mn:34:3:163 |
0.092 |
|
| 2019 |
Dan H, Huang X, Xing Y, Shen Y. Application of targeted exome and whole-exome sequencing for Chinese families with Stargardt disease. Annals of Human Genetics. PMID 31674661 DOI: 10.1111/Ahg.12361 |
0.091 |
|
| 2023 |
Yuan M, Jin S, Tan G, Song S, Liu Y, Wang H, Shen Y. A Non-canonical Excitatory PV RGC-PV SC Visual Pathway for Mediating the Looming-evoked Innate Defensive Response. Neuroscience Bulletin. PMID 37302108 DOI: 10.1007/s12264-023-01076-z |
0.091 |
|
| 2020 |
Anand A, Wei P, Gali NK, Sun L, Yang F, Westerdahl D, Zhang Q, Deng Z, Wang Y, Liu D, Shen Y, Fu Q, Liu J, Zhang C, Ho AMH, et al. Protocol development for real-time ship fuel sulfur content determination using drone based plume sniffing microsensor system. The Science of the Total Environment. 744: 140885. PMID 32755779 DOI: 10.1016/J.Scitotenv.2020.140885 |
0.091 |
|
| 2022 |
Xiong F, Yang H, Song YG, Qin HB, Zhang QY, Huang X, Jing W, Deng M, Liu Y, Liu Z, Shen Y, Han Y, Lu Y, Xu X, Holmes TC, et al. An HSV-1-H129 amplicon tracer system for rapid and efficient monosynaptic anterograde neural circuit tracing. Nature Communications. 13: 7645. PMID 36496505 DOI: 10.1038/s41467-022-35355-6 |
0.09 |
|
| 2017 |
Chen Y, Luo X, Liu S, Shen Y. Neuroprotective effect of cannabinoid receptor 1 antagonist in the MNU-induced retinal degeneration model. Experimental Eye Research. PMID 29126840 DOI: 10.1016/J.Exer.2017.11.001 |
0.089 |
|
| 2012 |
Shen Y, Rampino MA, Carroll RC, Nawy S. G-protein-mediated inhibition of the Trp channel TRPM1 requires the Gβγ dimer. Proceedings of the National Academy of Sciences of the United States of America. 109: 8752-7. PMID 22586107 DOI: 10.1073/Pnas.1117433109 |
0.087 |
|
| 2020 |
Tong Y, Lu W, Yu Y, Shen Y. Application of machine learning in ophthalmic imaging modalities. Eye and Vision (London, England). 7: 22. PMID 32322599 DOI: 10.1186/s40662-020-00183-6 |
0.087 |
|
| 2014 |
Chen YY, Liu SL, Hu DP, Xing YQ, Shen Y. N -methyl- N -nitrosourea-induced retinal degeneration in mice. Experimental Eye Research. 121: 102-13. PMID 24509257 DOI: 10.1016/j.exer.2013.12.019 |
0.086 |
|
| 2017 |
Chooback N, Shen Y, Jones M, Kasaian K, Martin M, Ng T, Thomson T, Marra M, Laskin J, Ho C. Carcinoma ex pleomorphic adenoma: case report and options for systemic therapy. Current Oncology (Toronto, Ont.). 24: e251-e254. PMID 28680294 DOI: 10.3747/Co.24.3588 |
0.085 |
|
| 2022 |
Hui L, Ning W, Rongjing Y, Shen Y, Bao Y, Jian C, Wenzhi R, Shuang L, Minghui Z. First deliveries of felines by transcervical transfer of in vitro-cultured embryos. Theriogenology. 193: 30-36. PMID 36126363 DOI: 10.1016/j.theriogenology.2022.09.008 |
0.085 |
|
| 2009 |
Shen Y, Heimel JA, Kamermans M, Peachey NS, Gregg RG, Nawy S. A transient receptor potential-like channel mediates synaptic transmission in rod bipolar cells. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 6088-93. PMID 19439586 DOI: 10.1523/Jneurosci.0132-09.2009 |
0.084 |
|
| 2017 |
Wang X, Yu S, Jia Q, Chen L, Zhong J, Pan Y, Shen P, Shen Y, Wang S, Wei Z, Cao Y, Lu Y. NiaoDuQing granules relieve chronic kidney disease symptoms by decreasing renal fibrosis and anemia. Oncotarget. 8: 55920-55937. PMID 28915563 DOI: 10.18632/oncotarget.18473 |
0.081 |
|
| 2021 |
Shen Y, Li B, Li G, Lang C, Wang H, Zhu J, Jia N, Liu L. Rapid identification of producing area of wheat using terahertz spectroscopy combined with chemometrics. Spectrochimica Acta. Part a, Molecular and Biomolecular Spectroscopy. 269: 120694. PMID 34922288 DOI: 10.1016/j.saa.2021.120694 |
0.08 |
|
| 2021 |
Cai D, Luo X, Shen K, Shen Y. GABAergic retinal ganglion cells regulate innate defensive responses. Neuroreport. 32: 643-649. PMID 33850087 DOI: 10.1097/WNR.0000000000001652 |
0.08 |
|
| 2005 |
Shen Y, Chen L, Ping Y, Yang XL. Glycine modulates the center response of ON type rod-dominant bipolar cells in carp retina. Brain Research Bulletin. 67: 492-7. PMID 16216698 DOI: 10.1016/J.Brainresbull.2005.07.013 |
0.078 |
|
| 2022 |
Yan J, Li Y, Zhang T, Shen Y. Numb deficiency impairs retinal structure and visual function in mice. Experimental Eye Research. 219: 109066. PMID 35430256 DOI: 10.1016/j.exer.2022.109066 |
0.076 |
|
| 2021 |
Tong Y, Huang X, Qi CX, Shen Y. Disrupted Neural Activity in Individuals With Iridocyclitis Using Regional Homogeneity: A Resting-State Functional Magnetic Resonance Imaging Study. Frontiers in Neurology. 12: 609929. PMID 33643195 DOI: 10.3389/fneur.2021.609929 |
0.075 |
|
| 2019 |
Jiang MN, Ma XY, Zhao QQ, Li Y, Xing YQ, Deng QQ, Shen Y. The neuroprotective effects of novel estrogen receptor GPER1 in mouse retinal ganglion cell degeneration. Experimental Eye Research. 107826. PMID 31586450 DOI: 10.1016/J.Exer.2019.107826 |
0.074 |
|
| 2020 |
Huang X, Wen Z, Qi CX, Tong Y, Dan HD, Xie BJ, Shen Y. Altered Temporal Dynamic Intrinsic Brain Activity in Late Blindness. Biomed Research International. 2020: 1913805. PMID 32685447 DOI: 10.1155/2020/1913805 |
0.071 |
|
| 2021 |
Tong Y, Huang X, Qi CX, Shen Y. Assessment of spontaneous brain activity patterns in patients with iridocyclitis: a resting-state study. Neuroreport. PMID 33789337 DOI: 10.1097/WNR.0000000000001631 |
0.069 |
|
| 2022 |
Shen Y, Mao S, Chen F, Zhao S, Su W, Fu L, Zare N, Karimi F. Electrochemical detection of Sudan red series azo dyes: Bibliometrics based analysis. Food and Chemical Toxicology : An International Journal Published For the British Industrial Biological Research Association. 163: 112960. PMID 35346746 DOI: 10.1016/j.fct.2022.112960 |
0.068 |
|
| 2004 |
Huang H, Luo DG, Shen Y, Zhang AJ, Yang R, Yang XL. AMPA receptor is involved in transmission of cone signal to ON bipolar cells in carp retina. Brain Research. 1002: 86-93. PMID 14988037 DOI: 10.1016/J.Brainres.2003.12.019 |
0.067 |
|
| 2021 |
Huang X, Wen Z, Qi CX, Tong Y, Shen Y. Dynamic Changes of Amplitude of Low-Frequency Fluctuations in Patients With Diabetic Retinopathy. Frontiers in Neurology. 12: 611702. PMID 33643197 DOI: 10.3389/fneur.2021.611702 |
0.067 |
|
| 2018 |
Lu W, Tong Y, Yu Y, Xing Y, Chen C, Shen Y. Applications of Artificial Intelligence in Ophthalmology: General Overview. Journal of Ophthalmology. 2018: 5278196. PMID 30581604 DOI: 10.1155/2018/5278196 |
0.066 |
|
| 2022 |
Chen F, Duan X, Yu Y, Yang S, Chen Y, Gee CE, Nagel G, Zhang K, Gao S, Shen Y. Visual function restoration with a highly sensitive and fast Channelrhodopsin in blind mice. Signal Transduction and Targeted Therapy. 7: 104. PMID 35430811 DOI: 10.1038/s41392-022-00935-x |
0.066 |
|
| 2014 |
Xu L, Wang F, Shen Y, Hou H, Liu W, Liu C, Jian C, Wang Y, Sun M, Sun Z. Pseudomonas aeruginosa inhibits the growth of pathogenic fungi: In vitro and in vivo studies. Experimental and Therapeutic Medicine. 7: 1516-1520. PMID 24926335 DOI: 10.3892/etm.2014.1631 |
0.066 |
|
| 2015 |
Cohen OS, Weickert TW, Hess JL, Paish LM, McCoy SY, Rothmond DA, Galletly C, Liu D, Weinberg DD, Huang XF, Xu Q, Shen Y, Zhang D, Yue W, Yan J, et al. A splicing-regulatory polymorphism in DRD2 disrupts ZRANB2 binding, impairs cognitive functioning and increases risk for schizophrenia in six Han Chinese samples. Molecular Psychiatry. PMID 26347318 DOI: 10.1038/Mp.2015.137 |
0.065 |
|
| 2020 |
Huang X, Tong Y, Qi CX, Dan HD, Deng QQ, Shen Y. Large-Scale Neuronal Network Dysfunction in Diabetic Retinopathy. Neural Plasticity. 2020: 6872508. PMID 32399026 DOI: 10.1155/2020/6872508 |
0.064 |
|
| 2021 |
Zhang K, Liu X, Xu J, Yuan J, Cai W, Chen T, Wang K, Gao Y, Nie S, Xu X, Qin X, Su Y, Xu W, Olvera A, Xue K, ... ... Shen Y, et al. Deep-learning models for the detection and incidence prediction of chronic kidney disease and type 2 diabetes from retinal fundus images. Nature Biomedical Engineering. 5: 533-545. PMID 34131321 DOI: 10.1038/s41551-021-00745-6 |
0.061 |
|
| 2022 |
Hu J, Shen Y, Zheng Y, Zhou W, Karimi-Maleh H, Liu Q, Fu L. Electrochemical fingerprinting sensor for plant phylogenetic investigation: A case of sclerophyllous oak. Frontiers in Plant Science. 13: 962301. PMID 36438123 DOI: 10.3389/fpls.2022.962301 |
0.06 |
|
| 2019 |
Huang X, Dan HD, Zhou FQ, Deng QQ, Shen Y. Abnormal intrinsic functional network hubs and connectivity following peripheral visual loss because of inherited retinal degeneration. Neuroreport. 30: 295-304. PMID 30763285 DOI: 10.1097/Wnr.0000000000001200 |
0.06 |
|
| 2018 |
Wen Z, Zhou FQ, Huang X, Dan HD, Xie BJ, Shen Y. Altered functional connectivity of primary visual cortex in late blindness. Neuropsychiatric Disease and Treatment. 14: 3317-3327. PMID 30584305 DOI: 10.2147/NDT.S183751 |
0.059 |
|
| 2019 |
Dan HD, Zhou FQ, Huang X, Xing YQ, Shen Y. Altered intra- and inter-regional functional connectivity of the visual cortex in individuals with peripheral vision loss due to retinitis pigmentosa. Vision Research. PMID 30904614 DOI: 10.1016/J.Visres.2019.02.013 |
0.059 |
|
| 2019 |
Dan H, Shen Y, Huang X, Zhou F, Xing Y. Arterial spin labeling perfusion magnetic resonance imaging reveals resting cerebral blood flow alterations specific to retinitis pigmentosa patients. Current Eye Research. PMID 31352839 DOI: 10.1080/02713683.2019.1649702 |
0.058 |
|
| 2020 |
Owji AP, Zhao Q, Ji C, Kittredge A, Hopiavuori A, Fu Z, Ward N, Clarke OB, Shen Y, Zhang Y, Hendrickson WA, Yang T. Structural and functional characterization of the bestrophin-2 anion channel. Nature Structural & Molecular Biology. PMID 32251414 DOI: 10.1038/S41594-020-0402-Z |
0.057 |
|
| 2019 |
Huang X, Tong Y, Qi CX, Xu YT, Dan HD, Shen Y. Disrupted topological organization of human brain connectome in diabetic retinopathy patients. Neuropsychiatric Disease and Treatment. 15: 2487-2502. PMID 31695385 DOI: 10.2147/Ndt.S214325 |
0.057 |
|
| 2021 |
Dan H, Lei X, Huang X, Ma N, Xing Y, Shen Y. CM082, a novel VEGF receptor tyrosine kinase inhibitor, can inhibit angiogenesis in vitro and in vivo. Microvascular Research. 104146. PMID 33610563 DOI: 10.1016/j.mvr.2021.104146 |
0.056 |
|
| 2021 |
Tong Y, Huang X, Qi CX, Shen Y. Altered Functional Connectivity of the Primary Visual Cortex in Patients With Iridocyclitis and Assessment of Its Predictive Value Using Machine Learning. Frontiers in Immunology. 12: 660554. PMID 34025659 DOI: 10.3389/fimmu.2021.660554 |
0.056 |
|
| 2022 |
Hui L, Ning W, Rongjing Y, Shen Y, Bao Y, Jian C, Wenzhi R, Shuang L, Minghui Z. Corrigendum to "First deliveries of felines by transcervical transfer of in vitro-cultured embryos" [Theriogenology 193 (2022) 30-36]. Theriogenology. 198: 210. PMID 36592520 DOI: 10.1016/j.theriogenology.2022.12.029 |
0.054 |
|
| 2010 |
Wang H, Zhao H, Ye Y, Xiong N, Huang J, Yao D, Shen Y, Zhao X. Focal cerebral ischemia induces Alzheimer's disease-like pathological change in rats. Journal of Huazhong University of Science and Technology. Medical Sciences = Hua Zhong Ke Ji Da Xue Xue Bao. Yi Xue Ying De Wen Ban = Huazhong Keji Daxue Xuebao. Yixue Yingdewen Ban. 30: 29-36. PMID 20155452 DOI: 10.1007/s11596-010-0106-4 |
0.054 |
|
| 2017 |
Lu JW, Lin L, Xiao LP, Li P, Shen Y, Zhang XL, Zhang M, Yu MX, Zhang YZ. Prognosis of 591 fetuses with ultrasonic soft markers during mid-term pregnancy. Journal of Huazhong University of Science and Technology. Medical Sciences = Hua Zhong Ke Ji Da Xue Xue Bao. Yi Xue Ying De Wen Ban = Huazhong Keji Daxue Xuebao. Yixue Yingdewen Ban. 37: 948-955. PMID 29270759 DOI: 10.1007/s11596-017-1833-6 |
0.053 |
|
| 2020 |
Zhu M, Yang H, Chen Z, Xia X, Deng Q, Shen Y. A cell-permeable peptide inhibitor of p55PIK signaling alleviates ocular inflammation in mouse models of uveitis. Experimental Eye Research. 108180. PMID 32777209 DOI: 10.1016/J.Exer.2020.108180 |
0.053 |
|
| 2020 |
Zhang Z, Shen Y, Wang H, Zhao L, Hu D. High-resolution computed tomographic imaging disclosing COVID-19 pneumonia: a powerful tool in diagnosis. The Journal of Infection. PMID 32283148 DOI: 10.1016/j.jinf.2020.03.047 |
0.053 |
|
| 2021 |
Shen Y, Zhao C, Li B, Li G, Yin Y, Pang B. Determination of wheat moisture using terahertz spectroscopy combined with the tabu search algorithm. Analytical Methods : Advancing Methods and Applications. 13: 4120-4130. PMID 34554150 DOI: 10.1039/d1ay00812a |
0.051 |
|
| 2020 |
Huang X, Wen Z, Tong Y, Qi CX, Shen Y. Altered resting cerebral blood flow specific to patients with diabetic retinopathy revealed by arterial spin labeling perfusion magnetic resonance imaging. Acta Radiologica (Stockholm, Sweden : 1987). 284185120932391. PMID 32551803 DOI: 10.1177/0284185120932391 |
0.049 |
|
| 2015 |
Luo X, Shen YM, Jiang MN, Lou XF, Shen Y. Ocular Blood Flow Autoregulation Mechanisms and Methods. Journal of Ophthalmology. 2015: 864871. PMID 26576295 DOI: 10.1155/2015/864871 |
0.046 |
|
| 2022 |
Zhang Y, Zeng R, Yang Y, Shen Y. Application of SYNTAX and its Derivative Scores in the Selection of Revascularization Strategies for Complex Coronary Heart Disease. Chinese Medical Sciences Journal = Chung-Kuo I Hsueh K'O Hsueh Tsa Chih. PMID 36137947 DOI: 10.24920/004085 |
0.045 |
|
| 2018 |
Huang X, Zhou FQ, Dan HD, Shen Y. Abnormal intrinsic brain activity in individuals with peripheral vision loss because of retinitis pigmentosa using amplitude of low-frequency fluctuations. Neuroreport. PMID 30113921 DOI: 10.1097/Wnr.0000000000001116 |
0.044 |
|
| 2005 |
Hubert C, Shen Y, Voordouw G. Changes in soil microbial community composition induced by cometabolism of toluene and trichloroethylene. Biodegradation. 16: 11-22. PMID 15727151 DOI: 10.1007/S10531-003-0471-4 |
0.043 |
|
| 2021 |
Coriddi M, Kim L, McGrath L, Encarnacion E, Brereton N, Shen Y, Barrio AV, Mehrara B, Dayan JH. ASO Visual Abstract: Accuracy, Sensitivity, and Specificity of the LLIS and ULL27 in Detecting Breast Cancer-Related Lymphedema. Annals of Surgical Oncology. PMID 34387768 DOI: 10.1245/s10434-021-10538-5 |
0.043 |
|
| 2021 |
Huang C, An J, Wang H, Liu Q, Tian J, Wang Q, Hu Q, Yan R, Shen Y, Duan Y, Fu Q, Shen J, Ye H, Wang M, Wei C, et al. Highly Resolved Dynamic Emissions of Air Pollutants and Greenhouse Gas CO during COVID-19 Pandemic in East China. Environmental Science & Technology Letters. 8: 853-860. PMID 37566377 DOI: 10.1021/acs.estlett.1c00600 |
0.042 |
|
| 2021 |
Fida TT, Sharma M, Shen Y, Voordouw G. Microbial sulfite oxidation coupled to nitrate reduction in makeup water for oil production. Chemosphere. 284: 131298. PMID 34175514 DOI: 10.1016/j.chemosphere.2021.131298 |
0.041 |
|
| 2020 |
Wang L, Shen Y, Li M, Chuang H, Ye Y, Zhao H, Wang H. Clinical manifestations and evidence of neurological involvement in 2019 novel coronavirus SARS-CoV-2: a systematic review and meta-analysis. Journal of Neurology. PMID 32529575 DOI: 10.1007/s00415-020-09974-2 |
0.041 |
|
| 2018 |
Sharma M, Menon P, Voordouw J, Shen Y, Voordouw G. Effect of long term application of tetrakis(hydroxymethyl)phosphonium sulfate (THPS) in a light oil-producing oilfield. Biofouling. 1-13. PMID 30149740 DOI: 10.1080/08927014.2018.1476500 |
0.039 |
|
| 2017 |
Chen C, Shen Y, An D, Voordouw G. Use of acetate, propionate and butyrate for reduction of nitrate and sulfate and methanogenesis in microcosms and bioreactors simulating an oil reservoir. Applied and Environmental Microbiology. PMID 28130297 DOI: 10.1128/Aem.02983-16 |
0.039 |
|
| 2021 |
Coriddi M, Kim L, McGrath L, Encarnacion E, Brereton N, Shen Y, Barrio AV, Mehrara B, Dayan JH. Accuracy, Sensitivity, and Specificity of the LLIS and ULL27 in Detecting Breast Cancer-Related Lymphedema. Annals of Surgical Oncology. PMID 34264409 DOI: 10.1245/s10434-021-10469-1 |
0.039 |
|
| 2021 |
Huang X, Xie BJ, Qi CX, Tong Y, Shen Y. Abnormal intrinsic functional network hubs in diabetic retinopathy patients. Neuroreport. PMID 33657077 DOI: 10.1097/WNR.0000000000001620 |
0.039 |
|
| 2020 |
Tong Y, Lu W, Deng QQ, Chen C, Shen Y. Automated identification of retinopathy of prematurity by image-based deep learning. Eye and Vision (London, England). 7: 40. PMID 32766357 DOI: 10.1186/s40662-020-00206-2 |
0.037 |
|
| 2016 |
Li N, Tu Y, Shen Y, Qin Y, Lei C, Liu X. Calycosin attenuates osteoporosis and regulates the expression of OPG/RANKL in ovariectomized ratsMAPK signaling. Die Pharmazie. 71: 607-612. PMID 29441931 DOI: 10.1691/ph.2016.6627 |
0.036 |
|
| 2021 |
Qi CX, Huang X, Tong Y, Shen Y. Altered Functional Connectivity Strength of Primary Visual Cortex in Subjects with Diabetic Retinopathy. Diabetes, Metabolic Syndrome and Obesity : Targets and Therapy. 14: 3209-3219. PMID 34285528 DOI: 10.2147/DMSO.S311009 |
0.036 |
|
| 2020 |
Wang H, Shen Y, Zhao L, Ye Y. 1-Deoxynojirimycin and Its Derivatives: A Mini Review of the Literature. Current Medicinal Chemistry. PMID 31942844 DOI: 10.2174/0929867327666200114112728 |
0.036 |
|
| 2019 |
Wang H, Shen Y, Chuang H, Chiu C, Ye Y, Zhao L. Neuroinflammation in Alzheimer's Disease: Microglia, Molecular Participants and Therapeutic Choices. Current Alzheimer Research. 16: 659-674. PMID 31580243 DOI: 10.2174/1567205016666190503151648 |
0.036 |
|
| 2019 |
Gao Q, Peng B, Huang X, Qi CX, Tong Y, Deng QQ, Shen Y. Assessment of cerebral low-frequency oscillations in patients with retinal vein occlusion: a preliminary functional MRI study. Acta Radiologica (Stockholm, Sweden : 1987). 284185119879683. PMID 31604375 DOI: 10.1177/0284185119879683 |
0.035 |
|
| 2021 |
Liu L, Huang X, Shen Y. COVID-2019 Associated with Acquired Monocular Blindness: Could Be Central Artery Occlusion or Viral Uveitis ? Current Eye Research. PMID 34264156 DOI: 10.1080/02713683.2021.1929327 |
0.035 |
|
| 2023 |
Chen G, Ma N, Zhu D, Zhou H, Liang Q, Meng J, Shen Y, Liu H, Liu L, He Z, Qin Z. Accurate diagnosis of bronchopulmonary infection in an anti-IFN-γ autoantibodies positive patient assisted by endobronchial ultrasound-guided TBNA and mNGS: a case report. Frontiers in Cellular and Infection Microbiology. 13: 1186335. PMID 37860065 DOI: 10.3389/fcimb.2023.1186335 |
0.035 |
|
| 2021 |
Hu X, Liu Q, Fu Q, Xu H, Shen Y, Liu D, Wang Y, Jia H, Cheng J. A high-resolution typical pollution source emission inventory and pollution source changes during the COVID-19 lockdown in a megacity, China. Environmental Science and Pollution Research International. PMID 33864221 DOI: 10.1007/s11356-020-11858-x |
0.034 |
|
| 2014 |
Ye Z, Shen Y, Ye X, Zhang Z, Chen S, Shi J. Phosphorus recovery from wastewater by struvite crystallization: property of aggregates. Journal of Environmental Sciences (China). 26: 991-1000. PMID 25079629 DOI: 10.1016/S1001-0742(13)60536-7 |
0.034 |
|
| 2014 |
Zhang Q, Shen YH, Wang YL, Li HL. Optimal Distribution of Gases in Integrated Iron and Steel Works Applied Mechanics and Materials. 492: 586-589. DOI: 10.4028/www.scientific.net/AMM.492.586 |
0.034 |
|
| 2007 |
Wnag P, Shen Y. [The methods of establishing rhinogenic model of acute sinusitis in the rabbit]. Lin Chuang Er Bi Yan Hou Tou Jing Wai Ke Za Zhi = Journal of Clinical Otorhinolaryngology, Head, and Neck Surgery. 21: 366-7. PMID 17608159 |
0.034 |
|
| 2020 |
Li J, Chen Y, Chen S, Wang S, Zhang D, Wang J, Postmus D, Zeng H, Qin G, Shen Y, Jiang J, Yu Y. Derivation and validation of a prognostic model for predicting in-hospital mortality in patients admitted with COVID-19 in Wuhan, China: the PLANS (platelet lymphocyte age neutrophil sex) model. Bmc Infectious Diseases. 20: 959. PMID 33334318 DOI: 10.1186/s12879-020-05688-y |
0.034 |
|
| 2020 |
He X, Wang L, Wang H, Xie Y, Yu Y, Sun J, Yan J, Du Y, Shen Y, Zeng H. Factors associated with acute cardiac injury and their effects on mortality in patients with COVID-19. Scientific Reports. 10: 20452. PMID 33235220 DOI: 10.1038/s41598-020-77172-1 |
0.033 |
|
| 2020 |
Guo W, Li M, Dong Y, Zhou H, Zhang Z, Tian C, Qin R, Wang H, Shen Y, Du K, Zhao L, Fan H, Luo S, Hu D. Diabetes is a risk factor for the progression and prognosis of COVID-19. Diabetes/Metabolism Research and Reviews. e3319. PMID 32233013 DOI: 10.1002/dmrr.3319 |
0.033 |
|
| 2020 |
Qi CX, Huang X, Shen Y. Altered Intrinsic Brain Activities in Patients with Diabetic Retinopathy Using Amplitude of Low-frequency Fluctuation: A Resting-state fMRI Study. Diabetes, Metabolic Syndrome and Obesity : Targets and Therapy. 13: 2833-2842. PMID 32884311 DOI: 10.2147/DMSO.S259476 |
0.031 |
|
| 2017 |
An BA, Shen Y, Voordouw G. Control of Sulfide Production in High Salinity Bakken Shale Oil Reservoirs by Halophilic Bacteria Reducing Nitrate to Nitrite. Frontiers in Microbiology. 8: 1164. PMID 28680423 DOI: 10.3389/Fmicb.2017.01164 |
0.031 |
|
| 2019 |
Fu R, Shen Y, Zheng J. Association between Common Genetic Variants in ESR1 and Stroke Risk: A Systematic Review and Meta-Analysis. Journal of Stroke and Cerebrovascular Diseases : the Official Journal of National Stroke Association. 104355. PMID 31533892 DOI: 10.1016/j.jstrokecerebrovasdis.2019.104355 |
0.03 |
|
| 2022 |
Liu Y, Shen Y, Pan Q, He H, Zou H, Huang Z, Liu Z, Wang X. Application of interdisciplinary collaborative hospice care for terminal geriatric cancer patients: a prospective randomized controlled study. Supportive Care in Cancer : Official Journal of the Multinational Association of Supportive Care in Cancer. PMID 35022886 DOI: 10.1007/s00520-022-06816-x |
0.03 |
|
| 2016 |
Voordouw G, Menon P, Pinnock T, Sharma M, Shen Y, Venturelli A, Voordouw J, Sexton A. Use of Homogeneously-Sized Carbon Steel Ball Bearings to Study Microbially-Influenced Corrosion in Oil Field Samples. Frontiers in Microbiology. 7: 351. PMID 27047467 DOI: 10.3389/Fmicb.2016.00351 |
0.029 |
|
| 2021 |
Liu L, Cai D, Huang X, Shen Y. COVID-2019 Associated with Acquired Monocular Blindness. Current Eye Research. 1-4. PMID 33530768 DOI: 10.1080/02713683.2021.1874027 |
0.027 |
|
| 2014 |
Wang HJ, Ye YF, Shen Y, Zhu R, Yao DX, Zhao HY. Surgical treatment of poor grade middle cerebral artery aneurysms associated with large sylvian hematomas following prophylactic hinged craniectomy. Journal of Huazhong University of Science and Technology. Medical Sciences = Hua Zhong Ke Ji Da Xue Xue Bao. Yi Xue Ying De Wen Ban = Huazhong Keji Daxue Xuebao. Yixue Yingdewen Ban. 34: 716-21. PMID 25318882 DOI: 10.1007/s11596-014-1341-x |
0.027 |
|
| 2018 |
Lu W, Tong Y, Yu Y, Xing Y, Chen C, Shen Y. Deep Learning-Based Automated Classification of Multi-Categorical Abnormalities From Optical Coherence Tomography Images. Translational Vision Science & Technology. 7: 41. PMID 30619661 DOI: 10.1167/Tvst.7.6.41 |
0.027 |
|
| 2023 |
Zhou R, Li J, Chen Z, Wang R, Shen Y, Zhang R, Zhou F, Zhang Y. Pathological hemodynamic changes and leukocyte transmigration disrupt the blood-spinal cord barrier after spinal cord injury. Journal of Neuroinflammation. 20: 118. PMID 37210532 DOI: 10.1186/s12974-023-02787-w |
0.026 |
|
| 2007 |
Shen YZ, Qi TK, Ma JX, Jiang XY, Wang JR, Xu QN, Huang Q, Liu XN, Sun HQ, Lu HZ. Invasive fungal infections among inpatients with acquired immune deficiency syndrome at a Chinese university hospital. Mycoses. 50: 475-80. PMID 17944709 DOI: 10.1111/j.1439-0507.2007.01421.x |
0.024 |
|
| 2021 |
Liu L, Cai D, Huang X, Shen Y. Acquired Monocular Blindness Associated with Retinitis and Optic Neuritis in COVID-19. Current Eye Research. 1-2. PMID 34056996 DOI: 10.1080/02713683.2021.1925699 |
0.023 |
|
| 2018 |
Chen Y, Shi Z, Shen Y. Eye damage due to cosmetic ultrasound treatment: a case report. Bmc Ophthalmology. 18: 214. PMID 30157786 DOI: 10.1186/s12886-018-0891-2 |
0.02 |
|
| 2018 |
Deng D, Liu L, Xu G, Gan J, Shen Y, Shi Y, Zhu R, Lin Y. Epidemiology and Serum Metabolic Characteristics of Acute Myocardial Infarction Patients in Chest Pain Centers. Iranian Journal of Public Health. 47: 1017-1029. PMID 30182001 |
0.019 |
|
| 2017 |
Rao D, Luo X, Tang M, Shen Y, Huang R, Yu J, Ren J, Cheng X, Lin K. Prevalence of mild cognitive impairment and its subtypes in community-dwelling residents aged 65 years or older in Guangzhou, China. Archives of Gerontology and Geriatrics. 75: 70-75. PMID 29197258 DOI: 10.1016/j.archger.2017.11.003 |
0.019 |
|
| 2020 |
Yu Y, Fan C, Bian J, Shen Y. Severe COVID-19 in a pregnant patient admitted to hospital in Wuhan. International Journal of Gynaecology and Obstetrics: the Official Organ of the International Federation of Gynaecology and Obstetrics. PMID 32428290 DOI: 10.1002/ijgo.13232 |
0.012 |
|
| 2022 |
Liu C, Shen Y, Wu X, Qian K, Hu X, Yang H. Artificial intelligence-assisted microcatheter shaping for intracranial aneurysm coiling: A preliminary study. Annals of Vascular Surgery. PMID 35339597 DOI: 10.1016/j.avsg.2022.03.013 |
0.01 |
|
| 2021 |
Liu C, Shen Y, Qian K, Hu Y, Hu X, Wu X. Application of covered stent graft in the treatment of complex carotid artery lesions: A single center experience. Vascular. 17085381211040991. PMID 34459287 DOI: 10.1177/17085381211040991 |
0.01 |
|
| 2019 |
Cai C, Dai H, Shen Y. Clinical characteristics and surgical outcomes of acute acquired Comitant Esotropia. Bmc Ophthalmology. 19: 173. PMID 31391009 DOI: 10.1186/s12886-019-1182-2 |
0.01 |
|
| 2019 |
Huang X, Zhou FQ, Dan HD, Shen Y. Impaired interhemispheric synchrony in late blindness. Acta Radiologica (Stockholm, Sweden : 1987). 284185119864843. PMID 31342759 DOI: 10.1177/0284185119864843 |
0.01 |
|
| 2013 |
Wu LN, He T, Xing YQ, Shen Y. Incidence of Terson's syndrome in patients with SAH in a Chinese hospital. Current Eye Research. 38: 97-101. PMID 22913767 DOI: 10.3109/02713683.2012.715713 |
0.01 |
|
| 2011 |
Wang P, Shen Y. [A clinical study on changes of EGF in serum before and after endoscopic surgery in patients with chronic sinusitis disease]. Lin Chuang Er Bi Yan Hou Tou Jing Wai Ke Za Zhi = Journal of Clinical Otorhinolaryngology, Head, and Neck Surgery. 25: 49-50. PMID 21473132 |
0.01 |
|
| 2010 |
Shen Y, Zhou Q, Cai Y, Hong X. ECP- and CMP-Aware Detailed Routing Algorithm for DFM Ieee Transactions On Very Large Scale Integration (Vlsi) Systems. 18: 153-157. DOI: 10.1109/TVLSI.2008.2008020 |
0.01 |
|
| Hide low-probability matches. |