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John E. Johnson, PhD - Publications

Affiliations: 
Scripps  Purdue, Scripps 
Area:
Structural Virology
Website:
http://www.scripps.edu/research/faculty/johnson
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308 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Castells-Graells R, Ribeiro JRS, Domitrovic T, Hesketh EL, Scarff CA, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP. Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus. Communications Biology. 4: 619. PMID 34031522 DOI: 10.1038/s42003-021-02134-w  0.335
2021 Johnson JE, Olson AJ. Icosahedral virus structures and the protein data bank. The Journal of Biological Chemistry. 100554. PMID 33744290 DOI: 10.1016/j.jbc.2021.100554  0.398
2021 Johnson JE, Domitrovic T, Matsui T, Castells-Graells R, Lomonossoff G. Dynamics and stability in the maturation of a eukaryotic virus: a paradigm for chemically programmed large-scale macromolecular reorganization. Archives of Virology. PMID 33683475 DOI: 10.1007/s00705-021-05007-z  0.311
2020 Montiel-Garcia D, Santoyo-Rivera N, Ho P, Carrillo-Tripp M, Iii CLB, Johnson JE, Reddy VS. VIPERdb v3.0: a structure-based data analytics platform for viral capsids. Nucleic Acids Research. PMID 33313778 DOI: 10.1093/nar/gkaa1096  0.326
2019 Johnson JE. Raising the Curtain on the Structure of Luteovirids. Structure (London, England : 1993). 27: 1735-1736. PMID 31801094 DOI: 10.1016/J.Str.2019.11.008  0.396
2019 Arnold E, Wu H, Johnson JE. Michael G. Rossmann (1930-2019), pioneer in macromolecular and virus crystallography: scientist, mentor and friend. Acta Crystallographica. Section D, Structural Biology. 75: 523-527. PMID 31205014 DOI: 10.1107/S2059798319008398  0.6
2019 Arnold E, Hasan SS, Johnson JE, Wu H, Zhao R. Michael G. Rossmann (1930–2019): pioneer in crystallography of macromolecules and viruses Acta Crystallographica Section a Foundations and Advances. 75: a450-a451. DOI: 10.1107/S0108767319095618  0.561
2018 Ho PT, Montiel-Garcia DJ, Wong JJ, Carrillo-Tripp M, Brooks CL, Johnson JE, Reddy VS. VIPERdb: A Tool for Virus Research. Annual Review of Virology. 5: 477-488. PMID 30265627 DOI: 10.1146/Annurev-Virology-092917-043405  0.399
2018 McNulty R, Cardone G, Gilcrease EB, Baker TS, Casjens SR, Johnson JE. Cryo-EM Elucidation of the Structure of Bacteriophage P22 Virions after Genome Release. Biophysical Journal. 114: 1295-1301. PMID 29590587 DOI: 10.1016/J.Bpj.2018.01.026  0.41
2018 Xu N, Veesler D, Doerschuk PC, Johnson JE. Allosteric effects in bacteriophage HK97 procapsids revealed directly from covariance analysis of cryo EM data. Journal of Structural Biology. PMID 29331608 DOI: 10.1016/J.Jsb.2017.12.013  0.345
2017 Wagner C, Reddy V, Asturias F, Khoshouei M, Johnson JE, Manrique P, Munson-McGee J, Baumeister W, Lawrence CM, Young MJ. Isolation and Characterization of Metallosphaera turreted icosahedral virus (MTIV), a founding member of a new family of archaeal viruses. Journal of Virology. PMID 28768871 DOI: 10.1128/Jvi.00925-17  0.562
2017 Azad K, Banerjee M, Johnson JE. Enzymes and Enzyme Activity Encoded by Nonenveloped Viruses. Annual Review of Virology. PMID 28637386 DOI: 10.1146/Annurev-Virology-101416-041944  0.333
2016 Safi M, Domitrovic T, Kapur A, Zhan N, Aldeek F, Johnson JE, Mattoussi H. Intracellular Delivery of Luminescent Quantum Dots Mediated by a Virus-Derived Lytic Peptide. Bioconjugate Chemistry. PMID 28001371 DOI: 10.1021/Acs.Bioconjchem.6B00609  0.314
2016 Penkler DL, Jiwaji M, Domitrovic T, Short JR, Johnson JE, Dorrington RA. Binding and entry of a non-enveloped T=4 insect RNA virus is triggered by alkaline pH. Virology. 498: 277-287. PMID 27614703 DOI: 10.1016/J.Virol.2016.08.028  0.41
2016 Doerschuk PC, Gong Y, Xu N, Domitrovic T, Johnson JE. Virus particle dynamics derived from CryoEM studies. Current Opinion in Virology. 18: 57-63. PMID 27085980 DOI: 10.1016/J.Coviro.2016.02.011  0.451
2016 Huynh NT, Hesketh EL, Saxena P, Meshcheriakova Y, Ku YC, Hoang LT, Johnson JE, Ranson NA, Lomonossoff GP, Reddy VS. Crystal Structure and Proteomics Analysis of Empty Virus-like Particles of Cowpea Mosaic Virus. Structure (London, England : 1993). PMID 27021160 DOI: 10.1016/J.Str.2016.02.011  0.686
2016 Veesler D, Kearney BM, Johnson JE. Integration of X-ray crystallography and electron cryo-microscopy in the analysis of virus structure and function Crystallography Reviews. 22: 102-127. DOI: 10.1080/0889311X.2015.1038530  0.476
2016 Wang K, Fu Cy, Catalano CE, Prevelige PE, Doerschuk PC, Johnson JE. Detecting asymmetry in the presence of symmetry with maximum likelihood threedimensional reconstructions of viruses from electron microscope images Iet Image Processing. 10: 624-629. DOI: 10.1049/Iet-Ipr.2015.0737  0.306
2016 Lebedev N, Griva I, Dressick WJ, Phelps J, Johnson JE, Meshcheriakova Y, Lomonossoff GP, Soto CM. Erratum to “A virus-based nanoplasmonic structure as a surface-enhanced Raman biosensor” [Biosens. Bioelectron. 77 (2016) 306–314] Biosensors and Bioelectronics. 79: 947. DOI: 10.1016/J.Bios.2015.12.048  0.37
2015 Gong Y, Veesler D, Doerschuk PC, Johnson JE. Effect of the viral protease on the dynamics of bacteriophage HK97 maturation intermediates characterized by variance analysis of cryo EM particle ensembles. Journal of Structural Biology. PMID 26724602 DOI: 10.1016/J.Jsb.2015.12.012  0.418
2015 Lebedev N, Griva I, Dressick WJ, Phelps J, Johnson JE, Meshcheriakova Y, Lomonossoff GP, Soto CM. A virus-based nanoplasmonic structure as a surface-enhanced Raman biosensor. Biosensors & Bioelectronics. 77: 306-314. PMID 26432193 DOI: 10.1016/J.Bios.2015.09.032  0.342
2015 Routh A, Chang MW, Okulicz JF, Johnson JE, Torbett BE. CoVaMa: Co-Variation Mapper for disequilibrium analysis of mutant loci in viral populations using next-generation sequence data. Methods (San Diego, Calif.). PMID 26408523 DOI: 10.1016/J.Ymeth.2015.09.021  0.332
2015 McNulty R, Lokareddy RK, Roy A, Yang Y, Lander GC, Heck AJ, Johnson JE, Cingolani G. Architecture of the Complex Formed by Large and Small Terminase Subunits from Bacteriophage P22. Journal of Molecular Biology. 427: 3285-99. PMID 26301600 DOI: 10.1016/J.Jmb.2015.08.013  0.59
2015 Berman HM, Gabanyi MJ, Groom CR, Johnson JE, Murshudov GN, Nicholls RA, Reddy V, Schwede T, Zimmerman MD, Westbrook J, Minor W. Data to knowledge: how to get meaning from your result. Iucrj. 2: 45-58. PMID 25610627 DOI: 10.1107/S2052252514023306  0.331
2014 Niu S, Gil-Salas FM, Tewary SK, Samales AK, Johnson J, Swaminathan K, Wong SM. Hibiscus chlorotic ringspot virus coat protein is essential for cell-to-cell and long-distance movement but not for viral RNA replication. Plos One. 9: e113347. PMID 25402344 DOI: 10.1371/Journal.Pone.0113347  0.401
2014 Campbell MG, Kearney BM, Cheng A, Potter CS, Johnson JE, Carragher B, Veesler D. Near-atomic resolution reconstructions using a mid-range electron microscope operated at 200 kV. Journal of Structural Biology. 188: 183-7. PMID 25278130 DOI: 10.1016/J.Jsb.2014.09.008  0.678
2014 Campbell MG, Kearney BM, Cheng A, Potter CS, Johnson JE, Carragher B, Veesler D. Near-atomic resolution reconstructions using a mid-range electron microscope operated at 200 kV. Journal of Structural Biology. 188: 183-7. PMID 25278130 DOI: 10.1016/J.Jsb.2014.09.008  0.678
2014 Kearney BM, Johnson JE. Assembly and maturation of a T = 4 quasi-equivalent virus is guided by electrostatic and mechanical forces. Viruses. 6: 3348-62. PMID 25153346 DOI: 10.3390/V6083348  0.434
2014 Fontana J, Dressick WJ, Phelps J, Johnson JE, Rendell RW, Sampson T, Ratna BR, Soto CM. Virus-templated plasmonic nanoclusters with icosahedral symmetry via directed self-assembly. Small (Weinheim An Der Bergstrasse, Germany). 10: 3058-63. PMID 24733721 DOI: 10.1002/Smll.201400470  0.354
2014 Johnson J. Virus Maturation and the VIPERdb Virus Structural Database Acta Crystallographica Section A. 70. DOI: 10.1107/S2053273314095096  0.423
2014 Snijder J, Rose RJ, Veesler D, Johnson JE, Heck AJR. Corrigendum: Studying 18 MDa Virus Assemblies with Native Mass Spectrometry Angewandte Chemie International Edition. 53: 3051-3051. DOI: 10.1002/Anie.201400943  0.354
2014 Snijder J, Rose RJ, Veesler D, Johnson JE, Heck AJR. Berichtigung: Studying 18 MDa Virus Assemblies with Native Mass Spectrometry Angewandte Chemie. 126: 3111-3111. DOI: 10.1002/Ange.201400943  0.354
2013 Yamane T, Helliwell JR, Johnson JE, Yasuoka N, Sakabe N. Diffraction structural biology - a new horizon. Journal of Synchrotron Radiation. 20: 819. PMID 24121319 DOI: 10.1107/S0909049513025478  0.318
2013 Veesler D, Campbell MG, Cheng A, Fu CY, Murez Z, Johnson JE, Potter CS, Carragher B. Maximizing the potential of electron cryomicroscopy data collected using direct detectors. Journal of Structural Biology. 184: 193-202. PMID 24036281 DOI: 10.1016/J.Jsb.2013.09.003  0.673
2013 Veesler D, Johnson JE. Cystovirus maturation at atomic resolution. Structure (London, England : 1993). 21: 1266-8. PMID 23931138 DOI: 10.1016/J.Str.2013.07.009  0.416
2013 Veesler D, Ng TS, Sendamarai AK, Eilers BJ, Lawrence CM, Lok SM, Young MJ, Johnson JE, Fu CY. Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography. Proceedings of the National Academy of Sciences of the United States of America. 110: 5504-9. PMID 23520050 DOI: 10.1073/Pnas.1300601110  0.56
2013 Domitrovic T, Movahed N, Bothner B, Matsui T, Wang Q, Doerschuk PC, Johnson JE. Virus assembly and maturation: auto-regulation through allosteric molecular switches. Journal of Molecular Biology. 425: 1488-96. PMID 23485419 DOI: 10.1016/J.Jmb.2013.02.021  0.446
2013 Lander GC, Johnson JE, Rau DC, Potter CS, Carragher B, Evilevitch A. DNA bending-induced phase transition of encapsidated genome in phage λ. Nucleic Acids Research. 41: 4518-24. PMID 23449219 DOI: 10.1093/Nar/Gkt137  0.744
2013 Johnson JE. Confessions of an icosahedral virus crystallographer. Microscopy (Oxford, England). 62: 69-79. PMID 23291268 DOI: 10.1093/Jmicro/Dfs097  0.381
2013 Wang Q, Matsui T, Domitrovic T, Zheng Y, Doerschuk PC, Johnson JE. Dynamics in cryo EM reconstructions visualized with maximum-likelihood derived variance maps. Journal of Structural Biology. 181: 195-206. PMID 23246781 DOI: 10.1016/J.Jsb.2012.11.005  0.333
2013 Veesler D, Ng T, Sendamarai A, Eilers B, Lawrence C, Lok S, Young M, Johnson J, Fu C. The Secrets of Life in Boiling Acids: Atomic Structure of Sulfolobus Turreted Icosahedral Virus Microscopy and Microanalysis. 19: 52-53. DOI: 10.1017/S1431927613002250  0.359
2012 Routh A, Ordoukhanian P, Johnson JE. Nucleotide-resolution profiling of RNA recombination in the encapsidated genome of a eukaryotic RNA virus by next-generation sequencing. Journal of Molecular Biology. 424: 257-69. PMID 23069247 DOI: 10.1016/J.Jmb.2012.10.005  0.347
2012 Routh A, Domitrovic T, Johnson JE. Packaging host RNAs in small RNA viruses: an inevitable consequence of an error-prone polymerase? Cell Cycle (Georgetown, Tex.). 11: 3713-4. PMID 22983002 DOI: 10.4161/Cc.22112  0.368
2012 Domitrovic T, Matsui T, Johnson JE. Dissecting quasi-equivalence in nonenveloped viruses: membrane disruption is promoted by lytic peptides released from subunit pentamers, not hexamers. Journal of Virology. 86: 9976-82. PMID 22761380 DOI: 10.1128/Jvi.01089-12  0.38
2012 Veesler D, Quispe J, Grigorieff N, Potter CS, Carragher B, Johnson JE. Maturation in action: CryoEM study of a viral capsid caught during expansion. Structure (London, England : 1993). 20: 1384-90. PMID 22748764 DOI: 10.1016/J.Str.2012.05.011  0.693
2012 Lander GC, Baudoux AC, Azam F, Potter CS, Carragher B, Johnson JE. Capsomer dynamics and stabilization in the T = 12 marine bacteriophage SIO-2 and its procapsid studied by CryoEM. Structure (London, England : 1993). 20: 498-503. PMID 22405008 DOI: 10.1016/J.Str.2012.01.007  0.768
2012 Routh A, Domitrovic T, Johnson JE. Host RNAs, including transposons, are encapsidated by a eukaryotic single-stranded RNA virus. Proceedings of the National Academy of Sciences of the United States of America. 109: 1907-12. PMID 22308402 DOI: 10.1073/Pnas.1116168109  0.332
2012 Roos WH, Gertsman I, May ER, Brooks CL, Johnson JE, Wuite GJ. Mechanics of bacteriophage maturation. Proceedings of the National Academy of Sciences of the United States of America. 109: 2342-7. PMID 22308333 DOI: 10.1073/Pnas.1109590109  0.352
2012 Hendrix RW, Johnson JE. Bacteriophage HK97 capsid assembly and maturation. Advances in Experimental Medicine and Biology. 726: 351-63. PMID 22297521 DOI: 10.1007/978-1-4614-0980-9_15  0.407
2012 Speir JA, Johnson JE. Nucleic acid packaging in viruses. Current Opinion in Structural Biology. 22: 65-71. PMID 22277169 DOI: 10.1016/J.Sbi.2011.11.002  0.358
2012 Baudoux AC, Hendrix RW, Lander GC, Bailly X, Podell S, Paillard C, Johnson JE, Potter CS, Carragher B, Azam F. Genomic and functional analysis of Vibrio phage SIO-2 reveals novel insights into ecology and evolution of marine siphoviruses. Environmental Microbiology. 14: 2071-86. PMID 22225728 DOI: 10.1111/J.1462-2920.2011.02685.X  0.743
2011 Khayat R, Johnson JE. Pass the jelly rolls. Structure (London, England : 1993). 19: 904-6. PMID 21742257 DOI: 10.1016/J.Str.2011.06.004  0.43
2011 Khayat R, Brunn N, Speir JA, Hardham JM, Ankenbauer RG, Schneemann A, Johnson JE. The 2.3-angstrom structure of porcine circovirus 2. Journal of Virology. 85: 7856-62. PMID 21632760 DOI: 10.1128/Jvi.00737-11  0.485
2011 Olia AS, Prevelige PE, Johnson JE, Cingolani G. Three-dimensional structure of a viral genome-delivery portal vertex. Nature Structural & Molecular Biology. 18: 597-603. PMID 21499245 DOI: 10.1038/Nsmb.2023  0.403
2011 Macheboeuf P, Buffalo C, Fu CY, Zinkernagel AS, Cole JN, Johnson JE, Nizet V, Ghosh P. Streptococcal M1 protein constructs a pathological host fibrinogen network. Nature. 472: 64-8. PMID 21475196 DOI: 10.1038/Nature09967  0.475
2011 Tang J, Lander GC, Olia AS, Olia A, Li R, Casjens S, Prevelige P, Cingolani G, Baker TS, Johnson JE. Peering down the barrel of a bacteriophage portal: the genome packaging and release valve in p22. Structure (London, England : 1993). 19: 496-502. PMID 21439834 DOI: 10.1016/J.Str.2011.02.010  0.63
2011 Wang K, Fu CY, Khayat R, Doerschuk PC, Johnson JE. In vivo virus structures: simultaneous classification, resolution enhancement, and noise reduction in whole-cell electron tomography. Journal of Structural Biology. 174: 425-33. PMID 21396453 DOI: 10.1016/J.Jsb.2011.03.003  0.369
2011 Huang RK, Khayat R, Lee KK, Gertsman I, Duda RL, Hendrix RW, Johnson JE. The Prohead-I structure of bacteriophage HK97: implications for scaffold-mediated control of particle assembly and maturation. Journal of Molecular Biology. 408: 541-54. PMID 21276801 DOI: 10.1016/J.Jmb.2011.01.016  0.442
2011 Fourme R, Helliwell JR, Johnson JE, Sakabe N, Yasuoka N. Diffraction structural biology--introductory overview. Journal of Synchrotron Radiation. 18: 1. PMID 21169679 DOI: 10.1107/S0909049510044912  0.316
2011 Tang J, Lander G, Olia A, Li R, Casjens S, Prevelige P, Cingolani G, Johnson J, Baker T. P22 Bacteriophage Portal: The Conduit for DNA Packaging and Release Microscopy and Microanalysis. 17: 100-101. DOI: 10.1017/S1431927611001371  0.558
2011 Tang J, Lander G, Olia A, Li R, Casjens S, Prevelige P, Cingolani G, Baker T, Johnson J. Peering Down the Barrel of a Bacteriophage Portal: The Genome Packaging and Release Valve in P22 Structure. 19: 748. DOI: 10.1016/J.Str.2011.05.001  0.545
2010 Johnson JE, Vogt PK. Cell entry by non-enveloped viruses. Current Topics in Microbiology and Immunology. 343: v-vii. PMID 21166102 DOI: 10.1007/978-3-642-13332-9  0.364
2010 Fu CY, Wang K, Gan L, Lanman J, Khayat R, Young MJ, Jensen GJ, Doerschuk PC, Johnson JE. In vivo assembly of an archaeal virus studied with whole-cell electron cryotomography. Structure (London, England : 1993). 18: 1579-86. PMID 21134637 DOI: 10.1016/J.Str.2010.10.005  0.393
2010 Miao Y, Johnson JE, Ortoleva PJ. All-atom multiscale simulation of cowpea chlorotic mottle virus capsid swelling. The Journal of Physical Chemistry. B. 114: 11181-95. PMID 20695471 DOI: 10.1021/Jp102314E  0.33
2010 Matsui T, Lander GC, Khayat R, Johnson JE. Subunits fold at position-dependent rates during maturation of a eukaryotic RNA virus. Proceedings of the National Academy of Sciences of the United States of America. 107: 14111-5. PMID 20660783 DOI: 10.1073/Pnas.1004221107  0.671
2010 Khayat R, Fu CY, Ortmann AC, Young MJ, Johnson JE. The architecture and chemical stability of the archaeal Sulfolobus turreted icosahedral virus. Journal of Virology. 84: 9575-83. PMID 20592081 DOI: 10.1128/Jvi.00708-10  0.45
2010 Speir JA, Taylor DJ, Natarajan P, Pringle FM, Ball LA, Johnson JE. Evolution in action: N and C termini of subunits in related T = 4 viruses exchange roles as molecular switches. Structure (London, England : 1993). 18: 700-9. PMID 20541507 DOI: 10.1016/J.Str.2010.03.010  0.575
2010 Odegard A, Banerjee M, Johnson JE. Flock house virus: a model system for understanding non-enveloped virus entry and membrane penetration. Current Topics in Microbiology and Immunology. 343: 1-22. PMID 20407886 DOI: 10.1007/82_2010_35  0.394
2010 Matsui T, Tsuruta H, Johnson JE. Balanced electrostatic and structural forces guide the large conformational change associated with maturation of T = 4 virus. Biophysical Journal. 98: 1337-43. PMID 20371334 DOI: 10.1016/J.Bpj.2009.12.4283  0.372
2010 Gertsman I, Fu CY, Huang R, Komives EA, Johnson JE. Critical salt bridges guide capsid assembly, stability, and maturation behavior in bacteriophage HK97. Molecular & Cellular Proteomics : McP. 9: 1752-63. PMID 20332083 DOI: 10.1074/Mcp.M000039-Mcp201  0.378
2010 Parent KN, Khayat R, Tu LH, Suhanovsky MM, Cortines JR, Teschke CM, Johnson JE, Baker TS. P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks. Structure (London, England : 1993). 18: 390-401. PMID 20223221 DOI: 10.1016/J.Str.2009.12.014  0.407
2010 Banerjee M, Speir JA, Kwan MH, Huang R, Aryanpur PP, Bothner B, Johnson JE. Structure and function of a genetically engineered mimic of a nonenveloped virus entry intermediate. Journal of Virology. 84: 4737-46. PMID 20164221 DOI: 10.1128/Jvi.02670-09  0.391
2010 Johnson JE. Virus particle maturation: insights into elegantly programmed nanomachines. Current Opinion in Structural Biology. 20: 210-6. PMID 20149636 DOI: 10.1016/J.Sbi.2010.01.004  0.467
2010 Zhao H, Finch CJ, Sequeira RD, Johnson BA, Johnson JE, Casjens SR, Tang L. Crystal structure of the DNA-recognition component of the bacterial virus Sf6 genome-packaging machine. Proceedings of the National Academy of Sciences of the United States of America. 107: 1971-6. PMID 20133842 DOI: 10.1073/Pnas.0908569107  0.39
2010 Gertsman I, Komives EA, Johnson JE. HK97 maturation studied by crystallography and H/2H exchange reveals the structural basis for exothermic particle transitions. Journal of Molecular Biology. 397: 560-74. PMID 20093122 DOI: 10.1016/J.Jmb.2010.01.016  0.379
2010 Khayat R, Lander GC, Johnson JE. An automated procedure for detecting protein folds from sub-nanometer resolution electron density. Journal of Structural Biology. 170: 513-21. PMID 20026407 DOI: 10.1016/J.Jsb.2009.12.014  0.607
2010 Steinmetz NF, Mertens ME, Taurog RE, Johnson JE, Commandeur U, Fischer R, Manchester M. Potato virus X as a novel platform for potential biomedical applications. Nano Letters. 10: 305-12. PMID 20017489 DOI: 10.1021/Nl9035753  0.356
2010 Cheung CL, Rubinstein AI, Peterson EJ, Chatterji A, Sabirianov RF, Mei WN, Lin T, Johnson JE, DeYoreo JJ. Steric and electrostatic complementarity in the assembly of two-dimensional virus arrays. Langmuir : the Acs Journal of Surfaces and Colloids. 26: 3498-505. PMID 19754157 DOI: 10.1021/La903114S  0.382
2009 Tang J, Lee KK, Bothner B, Baker TS, Yeager M, Johnson JE. Dynamics and stability in maturation of a T=4 virus. Journal of Molecular Biology. 392: 803-12. PMID 19627990 DOI: 10.1016/J.Jmb.2009.07.038  0.435
2009 Odegard AL, Kwan MH, Walukiewicz HE, Banerjee M, Schneemann A, Johnson JE. Low endocytic pH and capsid protein autocleavage are critical components of Flock House virus cell entry. Journal of Virology. 83: 8628-37. PMID 19553341 DOI: 10.1128/Jvi.00873-09  0.357
2009 Lander GC, Khayat R, Li R, Prevelige PE, Potter CS, Carragher B, Johnson JE. The P22 tail machine at subnanometer resolution reveals the architecture of an infection conduit. Structure (London, England : 1993). 17: 789-99. PMID 19523897 DOI: 10.1016/J.Str.2009.04.006  0.754
2009 Cheng A, Speir JA, Yuan YA, Johnson JE, Wong SM. Preliminary X-ray data analysis of crystalline hibiscus chlorotic ringspot virus. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 65: 589-93. PMID 19478438 DOI: 10.1107/S1744309109015760  0.483
2009 Ambrose RL, Lander GC, Maaty WS, Bothner B, Johnson JE, Johnson KN. Drosophila A virus is an unusual RNA virus with a T=3 icosahedral core and permuted RNA-dependent RNA polymerase. The Journal of General Virology. 90: 2191-200. PMID 19474243 DOI: 10.1099/Vir.0.012104-0  0.659
2009 Prust CJ, Doerschuk PC, Lander GC, Johnson JE. Ab initio maximum likelihood reconstruction from cryo electron microscopy images of an infectious virion of the tailed bacteriophage P22 and maximum likelihood versions of Fourier Shell Correlation appropriate for measuring resolution of spherical or cylindrical objects. Journal of Structural Biology. 167: 185-99. PMID 19457456 DOI: 10.1016/J.Jsb.2009.04.013  0.591
2009 Banerjee M, Khayat R, Walukiewicz HE, Odegard AL, Schneemann A, Johnson JE. Dissecting the functional domains of a nonenveloped virus membrane penetration peptide. Journal of Virology. 83: 6929-33. PMID 19369344 DOI: 10.1128/Jvi.02299-08  0.366
2009 Szymczyna BR, Taurog RE, Young MJ, Snyder JC, Johnson JE, Williamson JR. Synergy of NMR, computation, and X-ray crystallography for structural biology. Structure (London, England : 1993). 17: 499-507. PMID 19368883 DOI: 10.1016/J.Str.2009.03.001  0.37
2009 Devkota B, Petrov AS, Lemieux S, Boz MB, Tang L, Schneemann A, Johnson JE, Harvey SC. Structural and electrostatic characterization of pariacoto virus: implications for viral assembly. Biopolymers. 91: 530-8. PMID 19226622 DOI: 10.1002/Bip.21168  0.459
2009 Gertsman I, Gan L, Guttman M, Lee K, Speir JA, Duda RL, Hendrix RW, Komives EA, Johnson JE. An unexpected twist in viral capsid maturation. Nature. 458: 646-50. PMID 19204733 DOI: 10.1038/Nature07686  0.45
2009 Steinmetz NF, Lin T, Lomonossoff GP, Johnson JE. Structure-based engineering of an icosahedral virus for nanomedicine and nanotechnology. Current Topics in Microbiology and Immunology. 327: 23-58. PMID 19198569 DOI: 10.1007/978-3-540-69379-6_2  0.422
2009 Fulton J, Bothner B, Lawrence M, Johnson JE, Douglas T, Young M. Genetics, biochemistry and structure of the archaeal virus STIV. Biochemical Society Transactions. 37: 114-7. PMID 19143613 DOI: 10.1042/Bst0370114  0.421
2009 Matsui T, Lander G, Johnson JE. Characterization of large conformational changes and autoproteolysis in the maturation of a T=4 virus capsid. Journal of Virology. 83: 1126-34. PMID 18987141 DOI: 10.1128/Jvi.01859-08  0.619
2009 Carrillo-Tripp M, Shepherd CM, Borelli IA, Venkataraman S, Lander G, Natarajan P, Johnson JE, Brooks CL, Reddy VS. VIPERdb2: an enhanced and web API enabled relational database for structural virology. Nucleic Acids Research. 37: D436-42. PMID 18981051 DOI: 10.1093/Nar/Gkn840  0.64
2009 Johnson J. Biophysical Studies of Virus Particles and their Maturation: Insights into Elegantly Programmed Nano-machines Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.978  0.399
2008 Seetharam RN, Szuchmacher Blum A, Soto CM, Whitley JL, Sapsford KE, Chatterji A, Lin T, Johnson JE, Guerra C, Satir P, Ratna BR. Long term storage of virus templated fluorescent materials for sensing applications. Nanotechnology. 19: 105504. PMID 21817702 DOI: 10.1088/0957-4484/19/10/105504  0.336
2008 Lee KK, Gan L, Tsuruta H, Moyer C, Conway JF, Duda RL, Hendrix RW, Steven AC, Johnson JE. Virus capsid expansion driven by the capture of mobile surface loops. Structure (London, England : 1993). 16: 1491-502. PMID 18940605 DOI: 10.1016/J.Str.2008.06.014  0.573
2008 Lander GC, Evilevitch A, Jeembaeva M, Potter CS, Carragher B, Johnson JE. Bacteriophage lambda stabilization by auxiliary protein gpD: timing, location, and mechanism of attachment determined by cryo-EM. Structure (London, England : 1993). 16: 1399-406. PMID 18786402 DOI: 10.1016/J.Str.2008.05.016  0.782
2008 Nemecek D, Lander GC, Johnson JE, Casjens SR, Thomas GJ. Assembly architecture and DNA binding of the bacteriophage P22 terminase small subunit. Journal of Molecular Biology. 383: 494-501. PMID 18775728 DOI: 10.1016/J.Jmb.2008.08.050  0.599
2008 Johnson JE. Multi-disciplinary studies of viruses: the role of structure in shaping the questions and answers. Journal of Structural Biology. 163: 246-53. PMID 18485736 DOI: 10.1016/J.Jsb.2008.03.013  0.446
2008 Gan L, Johnson JE. An optimal exposure strategy for cryoprotected virus crystals with lattice constants greater than 1000 A. Journal of Synchrotron Radiation. 15: 223-6. PMID 18421144 DOI: 10.1107/S0909049507064813  0.394
2008 Kang S, Lander GC, Johnson JE, Prevelige PE. Development of bacteriophage p22 as a platform for molecular display: genetic and chemical modifications of the procapsid exterior surface. Chembiochem : a European Journal of Chemical Biology. 9: 514-8. PMID 18213564 DOI: 10.1002/Cbic.200700555  0.545
2008 Walukiewicz HE, Banerjee M, Schneemann A, Johnson JE. Rescue of maturation-defective flock house virus infectivity with noninfectious, mature, viruslike particles. Journal of Virology. 82: 2025-7. PMID 18077727 DOI: 10.1128/Jvi.02278-07  0.363
2008 Lanman J, Crum J, Deerinck TJ, Gaietta GM, Schneemann A, Sosinsky GE, Ellisman MH, Johnson JE. Visualizing flock house virus infection in Drosophila cells with correlated fluorescence and electron microscopy. Journal of Structural Biology. 161: 439-46. PMID 17998167 DOI: 10.1016/J.Jsb.2007.09.009  0.426
2008 Tsuruta H, Tuma R, French K, Prevelige P, Lee K, Gan L, Moyer C, Conway J, Duda R, Hendrix R, Steven A, Johnson J. Time-resolved X-ray scattering studies on bacteriophage assemblies Acta Crystallographica Section a Foundations of Crystallography. 64: C91-C92. DOI: 10.1107/S0108767308097067  0.469
2008 Johnson JE, Chen Z. Virus crystallography using synchrotron X‐ray radiation X‐Ray and Inner‐Shell Processes. 215: 863-877. DOI: 10.1063/1.39824  0.334
2007 Szymczyna BR, Gan L, Johnson JE, Williamson JR. Solution NMR studies of the maturation intermediates of a 13 MDa viral capsid. Journal of the American Chemical Society. 129: 7867-76. PMID 17536799 DOI: 10.1021/Ja071118J  0.332
2007 Johnson JE, Chiu W. DNA packaging and delivery machines in tailed bacteriophages. Current Opinion in Structural Biology. 17: 237-43. PMID 17395453 DOI: 10.1016/J.Sbi.2007.03.011  0.395
2007 Poliakov A, van Duijn E, Lander G, Fu CY, Johnson JE, Prevelige PE, Heck AJ. Macromolecular mass spectrometry and electron microscopy as complementary tools for investigation of the heterogeneity of bacteriophage portal assemblies. Journal of Structural Biology. 157: 371-83. PMID 17064935 DOI: 10.1016/J.Jsb.2006.09.003  0.605
2006 Gan L, Speir JA, Conway JF, Lander G, Cheng N, Firek BA, Hendrix RW, Duda RL, Liljas L, Johnson JE. Capsid conformational sampling in HK97 maturation visualized by X-ray crystallography and cryo-EM. Structure (London, England : 1993). 14: 1655-65. PMID 17098191 DOI: 10.1016/J.Str.2006.09.006  0.623
2006 Martin BD, Soto CM, Blum AS, Sapsford KE, Whitley JL, Johnson JE, Chatterji A, Ratna BR. An engineered virus as a bright fluorescent tag and scaffold for cargo proteins--capture and transport by gliding microtubules. Journal of Nanoscience and Nanotechnology. 6: 2451-60. PMID 17037855 DOI: 10.1166/Jnn.2006.548  0.345
2006 Cheung CL, Chung SW, Chatterji A, Lin T, Johnson JE, Hok S, Perkins J, De Yoreo JJ. Physical controls on directed virus assembly at nanoscale chemical templates. Journal of the American Chemical Society. 128: 10801-7. PMID 16910675 DOI: 10.1021/Ja0616884  0.37
2006 Ochoa WF, Chatterji A, Lin T, Johnson JE. Generation and structural analysis of reactive empty particles derived from an icosahedral virus. Chemistry & Biology. 13: 771-8. PMID 16873025 DOI: 10.1016/J.Chembiol.2006.05.014  0.456
2006 Maia LF, Soares MR, Valente AP, Almeida FC, Oliveira AC, Gomes AM, Freitas MS, Schneemann A, Johnson JE, Silva JL. Structure of a membrane-binding domain from a non-enveloped animal virus: insights into the mechanism of membrane permeability and cellular entry. The Journal of Biological Chemistry. 281: 29278-86. PMID 16861222 DOI: 10.1074/Jbc.M604689200  0.341
2006 Lander GC, Tang L, Casjens SR, Gilcrease EB, Prevelige P, Poliakov A, Potter CS, Carragher B, Johnson JE. The structure of an infectious P22 virion shows the signal for headful DNA packaging. Science (New York, N.Y.). 312: 1791-5. PMID 16709746 DOI: 10.1126/Science.1127981  0.758
2006 Tang L, Gilcrease EB, Casjens SR, Johnson JE. Highly discriminatory binding of capsid-cementing proteins in bacteriophage L. Structure (London, England : 1993). 14: 837-45. PMID 16698545 DOI: 10.1016/J.Str.2006.03.010  0.341
2006 Speir JA, Bothner B, Qu C, Willits DA, Young MJ, Johnson JE. Enhanced local symmetry interactions globally stabilize a mutant virus capsid that maintains infectivity and capsid dynamics. Journal of Virology. 80: 3582-91. PMID 16537626 DOI: 10.1128/Jvi.80.7.3582-3591.2006  0.425
2006 Tang J, Johnson JM, Dryden KA, Young MJ, Zlotnick A, Johnson JE. The role of subunit hinges and molecular "switches" in the control of viral capsid polymorphism. Journal of Structural Biology. 154: 59-67. PMID 16495083 DOI: 10.1016/J.Jsb.2005.10.013  0.629
2006 Wikoff WR, Conway JF, Tang J, Lee KK, Gan L, Cheng N, Duda RL, Hendrix RW, Steven AC, Johnson JE. Time-resolved molecular dynamics of bacteriophage HK97 capsid maturation interpreted by electron cryo-microscopy and X-ray crystallography. Journal of Structural Biology. 153: 300-6. PMID 16427314 DOI: 10.1016/J.Jsb.2005.11.009  0.556
2006 Shepherd CM, Borelli IA, Lander G, Natarajan P, Siddavanahalli V, Bajaj C, Johnson JE, Brooks CL, Reddy VS. VIPERdb: a relational database for structural virology. Nucleic Acids Research. 34: D386-9. PMID 16381893 DOI: 10.1093/Nar/Gkj032  0.62
2006 Walukiewicz HE, Johnson JE, Schneemann A. Morphological changes in the T=3 capsid of Flock House virus during cell entry. Journal of Virology. 80: 615-22. PMID 16378964 DOI: 10.1128/Jvi.80.2.615-622.2006  0.393
2006 Sapsford KE, Soto CM, Blum AS, Chatterji A, Lin T, Johnson JE, Ligler FS, Ratna BR. A cowpea mosaic virus nanoscaffold for multiplexed antibody conjugation: application as an immunoassay tracer. Biosensors & Bioelectronics. 21: 1668-73. PMID 16216488 DOI: 10.1016/J.Bios.2005.09.003  0.334
2006 Taylor DJ, Speir JA, Reddy V, Cingolani G, Pringle FM, Ball LA, Johnson JE. Preliminary x-ray characterization of authentic providence virus and attempts to express its coat protein gene in recombinant baculovirus. Archives of Virology. 151: 155-65. PMID 16211330 DOI: 10.1007/S00705-005-0637-3  0.482
2006 Prasad T, Turner M, Falkner J, Mittleman D, Johnson J, Lin T, Colvin V. Nanostructured virus crystals for X-ray optics Ieee Transactions On Nanotechnology. 5: 93-96. DOI: 10.1109/Tnano.2006.869692  0.39
2006 Tang L, Lander G, Casjens SR, Marion WR, Cingolani G, Prevelige PE, Johnson JE. The injectosome of bacteriophage P22 Microscopy and Microanalysis. 12: 394-395. DOI: 10.1017/S1431927606064221  0.534
2005 Blum AS, Soto CM, Wilson CD, Brower TL, Pollack SK, Schull TL, Chatterji A, Lin T, Johnson JE, Amsinck C, Franzon P, Shashidhar R, Ratna BR. An engineered virus as a scaffold for three-dimensional self-assembly on the nanoscale. Small (Weinheim An Der Bergstrasse, Germany). 1: 702-6. PMID 17193509 DOI: 10.1002/Smll.200500021  0.344
2005 Khayat R, Tang L, Larson ET, Lawrence CM, Young M, Johnson JE. Structure of an archaeal virus capsid protein reveals a common ancestry to eukaryotic and bacterial viruses. Proceedings of the National Academy of Sciences of the United States of America. 102: 18944-9. PMID 16357204 DOI: 10.1073/Pnas.0506383102  0.59
2005 Natarajan P, Lander GC, Shepherd CM, Reddy VS, Brooks CL, Johnson JE. Exploring icosahedral virus structures with VIPER. Nature Reviews. Microbiology. 3: 809-17. PMID 16205712 DOI: 10.1038/Nrmicro1283  0.692
2005 Reddy VS, Johnson JE. Structure-Derived Insights into Virus Assembly Advances in Virus Research. 64: 45-68. PMID 16139592 DOI: 10.1016/S0065-3527(05)64003-1  0.407
2005 Lee KK, Tsuruta H, Hendrix RW, Duda RL, Johnson JE. Cooperative reorganization of a 420 subunit virus capsid. Journal of Molecular Biology. 352: 723-35. PMID 16095623 DOI: 10.1016/J.Jmb.2005.07.024  0.35
2005 Du Plessis L, Hendry DA, Dorrington RA, Hanzlik TN, Johnson JE, Appel M. Revised RNA2 sequence of the tetravirus, Nudaurelia capensis ω virus (NωV) Archives of Virology. 150: 2397-2402. PMID 16012786 DOI: 10.1007/S00705-005-0575-0  0.343
2005 Tang L, Marion WR, Cingolani G, Prevelige PE, Johnson JE. Three-dimensional structure of the bacteriophage P22 tail machine. The Embo Journal. 24: 2087-95. PMID 15933718 DOI: 10.1038/Sj.Emboj.7600695  0.354
2005 Lin T, Schildkamp W, Brister K, Doerschuk PC, Somayazulu M, Mao HK, Johnson JE. The mechanism of high-pressure-induced ordering in a macromolecular crystal. Acta Crystallographica. Section D, Biological Crystallography. 61: 737-43. PMID 15930631 DOI: 10.1107/S0907444905000053  0.326
2005 Medintz IL, Sapsford KE, Konnert JH, Chatterji A, Lin T, Johnson JE, Mattoussi H. Decoration of discretely immobilized cowpea mosaic virus with luminescent quantum dots. Langmuir : the Acs Journal of Surfaces and Colloids. 21: 5501-10. PMID 15924481 DOI: 10.1021/La0468287  0.373
2005 Falkner JC, Turner ME, Bosworth JK, Trentler TJ, Johnson JE, Lin T, Colvin VL. Virus crystals as nanocomposite scaffolds. Journal of the American Chemical Society. 127: 5274-5. PMID 15826137 DOI: 10.1021/Ja044496M  0.326
2005 Chatterji A, Ochoa WF, Ueno T, Lin T, Johnson JE. A virus-based nanoblock with tunable electrostatic properties. Nano Letters. 5: 597-602. PMID 15826093 DOI: 10.1021/Nl048007S  0.386
2005 Bothner B, Taylor D, Jun B, Lee KK, Siuzdak G, Schultz CP, Schlutz CP, Johnson JE. Maturation of a tetravirus capsid alters the dynamic properties and creates a metastable complex. Virology. 334: 17-27. PMID 15749119 DOI: 10.1016/J.Virol.2005.01.017  0.59
2005 Girard E, Kahn R, Mezouar M, Dhaussy AC, Lin T, Johnson JE, Fourme R. The first crystal structure of a macromolecular assembly under high pressure: CpMV at 330 MPa Biophysical Journal. 88: 3562-3571. PMID 15731378 DOI: 10.1529/Biophysj.104.058636  0.326
2005 Taylor DJ, Johnson JE. Folding and particle assembly are disrupted by single-point mutations near the autocatalytic cleavage site of Nudaurelia capensis omega virus capsid protein. Protein Science : a Publication of the Protein Society. 14: 401-8. PMID 15659373 DOI: 10.1110/Ps.041054605  0.621
2005 Tang J, Naitow H, Gardner NA, Kolesar A, Tang L, Wickner RB, Johnson JE. The structural basis of recognition and removal of cellular mRNA 7-methyl G 'caps' by a viral capsid protein: A unique viral response to host defense Journal of Molecular Recognition. 18: 158-168. PMID 15597333 DOI: 10.1002/Jmr.724  0.418
2005 Chatterji A, Ochoa WF, Paine M, Ratna BR, Johnson JE, Lin T. New addresses on an addressable virus nanoblock; uniquely reactive Lys residues on cowpea mosaic virus. Chemistry & Biology. 11: 855-63. PMID 15217618 DOI: 10.1016/j.chembiol.2004.04.011  0.302
2005 Lee J, Zheng Y, Doerschuk PC, Tang J, Johnson JE. Computing the 3-D structure of viruses from electron microscope images Optics Infobase Conference Papers. DOI: 10.1364/Srs.2005.Sma2  0.326
2005 Bothner B, Taylor D, Jun B, Lee KK, Siuzdak G, Schultz CP, Johnson JE. Corrigendum to “Maturation of a tetravirus capsid alters the dynamic properties and creates a metastable complex” [Virology 334 (2005) 17–27] Virology. 339: 145. DOI: 10.1016/J.Virol.2005.04.016  0.469
2005 Blum AS, Soto CM, Wilson CD, Brower TL, Pollack SK, Schull TL, Chatterji A, Lin T, Johnson JE, Amsinck C, Franzon P, Shashidhar R, Ratna BR. Cover Picture: An Engineered Virus as a Scaffold for Three‐Dimensional Self‐Assembly on the Nanoscale (Small 7/2005) Small. 1: 669-669. DOI: 10.1002/Smll.200590022  0.324
2004 Johnson KN, Tang L, Johnson JE, Ball LA. Heterologous RNA encapsidated in Pariacoto virus-like particles forms a dodecahedral cage similar to genomic RNA in wild-type virions. Journal of Virology. 78: 11371-8. PMID 15452258 DOI: 10.1128/Jvi.78.20.11371-11378.2004  0.417
2004 Chatterji A, Ochoa W, Shamieh L, Salakian SP, Wong SM, Clinton G, Ghosh P, Lin T, Johnson JE. Chemical conjugation of heterologous proteins on the surface of Cowpea mosaic virus. Bioconjugate Chemistry. 15: 807-13. PMID 15264868 DOI: 10.1021/Bc0402888  0.62
2004 Lee KK, Gan L, Tsuruta H, Hendrix RW, Duda RL, Johnson JE. Evidence that a local refolding event triggers maturation of HK97 bacteriophage capsid. Journal of Molecular Biology. 340: 419-33. PMID 15210344 DOI: 10.1016/J.Jmb.2004.05.008  0.333
2004 Lee KK, Tang J, Taylor D, Bothner B, Johnson JE. Small compounds targeted to subunit interfaces arrest maturation in a nonenveloped, icosahedral animal virus. Journal of Virology. 78: 7208-16. PMID 15194797 DOI: 10.1128/Jvi.78.13.7208-7216.2004  0.604
2004 Gan L, Conway JF, Firek BA, Cheng N, Hendrix RW, Steven AC, Johnson JE, Duda RL. Control of crosslinking by quaternary structure changes during bacteriophage HK97 maturation. Molecular Cell. 14: 559-69. PMID 15175152 DOI: 10.1016/J.Molcel.2004.05.015  0.56
2004 Rice G, Tang L, Stedman K, Roberto F, Spuhler J, Gillitzer E, Johnson JE, Douglas T, Young M. The structure of a thermophilic archaeal virus shows a double-stranded DNA viral capsid type that spans all domains of life. Proceedings of the National Academy of Sciences of the United States of America. 101: 7716-20. PMID 15123802 DOI: 10.1073/Pnas.0401773101  0.412
2004 Brumfield S, Willits D, Tang L, Johnson JE, Douglas T, Young M. Heterologous expression of the modified coat protein of Cowpea chlorotic mottle bromovirus results in the assembly of protein cages with altered architectures and function. The Journal of General Virology. 85: 1049-53. PMID 15039547 DOI: 10.1099/Vir.0.19688-0  0.408
2004 Tihova M, Dryden KA, Le TV, Harvey SC, Johnson JE, Yeager M, Schneemann A. Nodavirus coat protein imposes dodecahedral RNA structure independent of nucleotide sequence and length. Journal of Virology. 78: 2897-905. PMID 14990708 DOI: 10.1128/Jvi.78.6.2897-2905.2004  0.396
2004 Helgstrand C, Munshi S, Johnson JE, Liljas L. The refined structure of Nudaurelia capensis omega virus reveals control elements for a T = 4 capsid maturation. Virology. 318: 192-203. PMID 14972547 DOI: 10.1016/J.Virol.2003.08.045  0.48
2004 Johnson JE. Virus structure analysis with synchrotron radiation: methods and results. Journal of Synchrotron Radiation. 11: 89-92. PMID 14646143 DOI: 10.1107/S0909049503023884  0.462
2004 Girard E, Kahn R, Ascone I, Mezouar M, Dhaussy AC, Lin T, Johnson JE, Fourme R. A new dimension in structural biology: Fully fledged high-pressure macromolecular crystallography High Pressure Research. 24: 173-182. DOI: 10.1080/08957950410001661873  0.37
2004 Blum AS, Soto CM, Wilson CD, Cole JD, Kim M, Gnade B, Chatterji A, Ochoa WF, Lin T, Johnson JE, Ratna BR. Cowpea mosaic virus as a scaffold for 3-D patterning of gold nanoparticles Nano Letters. 4: 867-870. DOI: 10.1021/Nl0497474  0.305
2004 Strable E, Johnson JE, Finn MG. Natural nanochemical building blocks: Icosahedral virus particles organized by attached oligonucleotides Nano Letters. 4: 1385-1389. DOI: 10.1021/Nl0493850  0.404
2004 Chatterji A, Ochoa WF, Paine M, Ratna B, Johnson JE, Lin T. New Addresses on an Addressable Virus Nanoblock Chemistry & Biology. 11: 855-863. DOI: 10.1016/J.Chembiol.2004.04.011  0.401
2003 Lin T, Johnson JE. Structures of Picorna-Like Plant Viruses: Implications and Applications Advances in Virus Research. 62: 167-239. PMID 14719366 DOI: 10.1016/S0065-3527(03)62004-X  0.458
2003 Taylor DJ, Wang Q, Bothner B, Natarajan P, Finn MG, Johnson JE. Correlation of chemical reactivity of Nudaurelia capensis omega virus with a pH-induced conformational change. Chemical Communications (Cambridge, England). 2770-1. PMID 14651097 DOI: 10.1039/B310533D  0.573
2003 Wikoff WR, Che Z, Duda RL, Hendrix RW, Johnson JE. Crystallization and preliminary analysis of a dsDNA bacteriophage capsid intermediate: Prohead II of HK97. Acta Crystallographica. Section D, Biological Crystallography. 59: 2060-4. PMID 14646062 DOI: 10.1107/S0907444903022261  0.397
2003 Helgstrand C, Wikoff WR, Duda RL, Hendrix RW, Johnson JE, Liljas L. The refined structure of a protein catenane: the HK97 bacteriophage capsid at 3.44 A resolution. Journal of Molecular Biology. 334: 885-99. PMID 14643655 DOI: 10.1016/J.Jmb.2003.09.035  0.409
2003 Yin Z, Zheng Y, Doerschuk PC, Natarajan P, Johnson JE. A statistical approach to computer processing of cryo-electron microscope images: virion classification and 3-D reconstruction. Journal of Structural Biology. 144: 24-50. PMID 14643207 DOI: 10.1016/J.Jsb.2003.09.023  0.365
2003 Lee KK, Johnson JE. Complementary approaches to structure determination of icosahedral viruses Current Opinion in Structural Biology. 13: 558-569. PMID 14568610 DOI: 10.1016/J.Sbi.2003.09.007  0.382
2003 Johnson JE. An atomic model of a plant reovirus: Rice dwarf virus Structure. 11: 1193-1194. PMID 14527385 DOI: 10.1016/J.Str.2003.09.010  0.396
2003 Lin T, Cavarelli J, Johnson JE. Evidence for assembly-dependent folding of protein and RNA in an icosahedral virus. Virology. 314: 26-33. PMID 14517057 DOI: 10.1016/S0042-6822(03)00457-4  0.429
2003 Fourme R, Girard E, Kahn R, Ascone I, Mezouar M, Dhaussy AC, Lin T, Johnson JE. Using a quasi-parallel X-ray beam of ultrashort wavelength for high-pressure virus crystallography: Implications for standard macromolecular crystallography Acta Crystallographica - Section D Biological Crystallography. 59: 1767-1772. PMID 14501116 DOI: 10.1107/S0907444903016287  0.355
2003 Johnson JE. Virus particle dynamics Advances in Protein Chemistry. 64: 197-218. PMID 13677048 DOI: 10.1016/S0065-3233(03)01005-2  0.376
2003 Chiu W, Johnson JE. Virus structure: Preface Advances in Protein Chemistry. 64: xi-xii. PMID 13677043 DOI: 10.1016/S0065-3233(03)09001-6  0.431
2003 Cheung CL, Camarero JA, Woods BW, Lin T, Johnson JE, De Yoreo JJ. Fabrication of assembled virus nanostructures on templates of chemoselective linkers formed by scanning probe nanolithography. Journal of the American Chemical Society. 125: 6848-9. PMID 12783520 DOI: 10.1021/Ja034479H  0.391
2003 Liu H, Qu C, Johnson JE, Case DA. Pseudo-atomic models of swollen CCMV from cryo-electron microscopy data. Journal of Structural Biology. 142: 356-63. PMID 12781662 DOI: 10.1016/S1047-8477(03)00028-5  0.423
2003 Raja KS, Wang Q, Gonzalez MJ, Manchester M, Johnson JE, Finn MG. Hybrid virus-polymer materials. 1. Synthesis and properties of PEG-decorated cowpea mosaic virus Biomacromolecules. 4: 472-476. PMID 12741758 DOI: 10.1021/Bm025740+  0.333
2003 Willits D, Zhao X, Olson N, Baker TS, Zlotnick A, Johnson JE, Douglas T, Young MJ. Effects of the cowpea chlorotic mottle bromovirus beta-hexamer structure on virion assembly. Virology. 306: 280-8. PMID 12642101 DOI: 10.1016/S0042-6822(02)00054-5  0.605
2003 Wang Q, Lin T, Tang L, Johnson JE, Finn MG. Icosahedral virus particles as addressable nanoscale building blocks. Angewandte Chemie (International Ed. in English). 41: 459-62. PMID 12491378 DOI: 10.1002/1521-3773(20020201)41:3<459::Aid-Anie459>3.0.Co;2-O  0.389
2003 Wang Q, Lin T, Johnson JE, Finn MG. Natural supramolecular building blocks. Cysteine-added mutants of cowpea mosaic virus. Chemistry & Biology. 9: 813-9. PMID 12144925 DOI: 10.1016/S1074-5521(02)00166-7  0.317
2003 Wang Q, Kaltgrad E, Lin T, Johnson JE, Finn MG. Natural supramolecular building blocks. Wild-type cowpea mosaic virus. Chemistry & Biology. 9: 805-11. PMID 12144924 DOI: 10.1016/S1074-5521(02)00165-5  0.439
2003 Yin Z, Zheng Y, Doerschuk PC, Johnson JE. Computational 3-D Reconstructions by Optimization for Cryo-Electron Microscopy Proceedings of Spie - the International Society For Optical Engineering. 5016: 71-79. DOI: 10.1117/12.479705  0.309
2003 Smith JC, Lee KB, Wang Q, Finn MG, Johnson JE, Mrksich M, Mirkin CA. Nanopatterning the chemospecific immobilization of cowpea mosaic virus capsid Nano Letters. 3: 883-886. DOI: 10.1021/Nl025956H  0.368
2002 Chatterji A, Burns LL, Taylor SS, Lomonossoff GP, Johnson JE, Lin T, Porta C. Cowpea mosaic virus: From the presentation of antigenic peptides to the display of active biomaterials Intervirology. 45: 362-370. PMID 12602357 DOI: 10.1159/000067929  0.353
2002 Damodaran KV, Reddy VS, Johnson JE, Brooks CL. A general method to quantify quasi-equivalence in icosahedral viruses Journal of Molecular Biology. 324: 723-737. PMID 12460573 DOI: 10.1016/S0022-2836(02)01138-5  0.412
2002 Fourme R, Ascone I, Kahn R, Mezouar M, Bouvier P, Girard E, Lin T, Johnson JE. Opening the high-pressure domain beyond 2 kbar to protein and virus crystallography: Technical advance Structure. 10: 1409-1414. PMID 12377126 DOI: 10.1016/S0969-2126(02)00850-X  0.356
2002 Cingolani G, Moore SD, Prevelige PE, Johnson JE. Preliminary crystallographic analysis of the bacteriophage P22 portal protein. Journal of Structural Biology. 139: 46-54. PMID 12372319 DOI: 10.1016/S1047-8477(02)00512-9  0.393
2002 Da Poian AT, Johnson JE, Silva JL. Protein-RNA interactions and virus stability as probed by the dynamics of tryptophan side chains Journal of Biological Chemistry. 277: 47596-47602. PMID 12359712 DOI: 10.1074/Jbc.M209174200  0.413
2002 Tang L, Johnson JE. Structural Biology of Viruses by the Combination of Electron Cryomicroscopy and X-ray Crystallography† Biochemistry. 41: 11517-11524. PMID 12269795 DOI: 10.1021/Bi020170J  0.36
2002 Naitow H, Tang J, Canady M, Wickner RB, Johnson JE. L-A virus at 3.4 Å resolution reveals particle architecture and mRNA decapping mechanism Nature Structural Biology. 9: 725-728. PMID 12244300 DOI: 10.1038/Nsb844  0.425
2002 Taylor DJ, Krishna NK, Canady MA, Schneemann A, Johnson JE. Large-scale, pH-dependent, quaternary structure changes in an RNA virus capsid are reversible in the absence of subunit autoproteolysis. Journal of Virology. 76: 9972-80. PMID 12208973 DOI: 10.1128/Jvi.76.19.9972-9980.2002  0.608
2002 Tang L, Lin CS, Krishna NK, Yeager M, Schneemann A, Johnson JE. Virus-like particles of a fish nodavirus display a capsid subunit domain organization different from that of insect nodaviruses Journal of Virology. 76: 6370-6375. PMID 12021370 DOI: 10.1128/Jvi.76.12.6370-6375.2002  0.472
2002 Khor IW, Lin T, Langedijk JP, Johnson JE, Manchester M. Novel strategy for inhibiting viral entry by use of a cellular receptor-plant virus chimera. Journal of Virology. 76: 4412-9. PMID 11932408 DOI: 10.1128/Jvi.76.9.4412-4419.2002  0.308
2002 Liljas L, Tate J, Lin T, Christian P, Johnson JE. Evolutionary and taxonomic implications of conserved structural motifs between picornaviruses and insect picorna-like viruses. Archives of Virology. 147: 59-84. PMID 11855636 DOI: 10.1007/S705-002-8303-1  0.438
2002 Kahn R, Ascone I, Mezouar M, Girard E, Bouvier P, Johnson JE, Fourme R. Protein and virus crystallography at high hydrostatic pressure beyond 2 kbar Acta Crystallographica Section a Foundations of Crystallography. 58: c253-c253. DOI: 10.1107/S0108767302095119  0.346
2002 Liljas L, Helgstrand C, Wykoff WR, Johnson JE. Maturation and quasiequivalence in the covalently linked capsid of phage HK97 Acta Crystallographica Section A. 58: 12-12. DOI: 10.1107/S0108767302085562  0.309
2002 Fang J, Soto CM, Lin T, Johnson JE, Ratna B. Complex Pattern Formation by Cowpea Mosaic Virus Nanoparticles Langmuir. 18: 308-310. DOI: 10.1021/La0112357  0.351
2001 Lin C, Lu M, Tang L, Liu W, Chao C, Lin CJ, Krishna NK, Johnson JE, Schneemann A. Characterization of virus-like particles assembled in a recombinant baculovirus system expressing the capsid protein of a fish nodavirus. Virology. 290: 50-58. PMID 11883005 DOI: 10.1006/Viro.2001.1157  0.46
2001 Reddy VS, Natarajan P, Okerberg B, Li K, Damodaran KV, Morton RT, Brooks CL, Johnson JE. Virus Particle Explorer (VIPER), a website for virus capsid structures and their computational analyses. Journal of Virology. 75: 11943-7. PMID 11711584 DOI: 10.1128/Jvi.75.24.11943-11947.2001  0.464
2001 Naitow H, Canady MA, Lin T, Wickner RB, Johnson JE. Purification, crystallization, and preliminary X-ray analysis of L-A: A dsRNA yeast virus Journal of Structural Biology. 135: 1-7. PMID 11562160 DOI: 10.1006/Jsbi.2001.4371  0.434
2001 Canady MA, Tsuruta H, Johnson JE. Analysis of rapid, large-scale protein quaternary structural changes: time-resolved X-ray solution scattering of Nudaurelia capensis omega virus (NomegaV) maturation. Journal of Molecular Biology. 311: 803-814. PMID 11518532 DOI: 10.1006/Jmbi.2001.4896  0.367
2001 Conway JF, Wikoff WR, Cheng N, Duda RL, Hendrix RW, Johnson JE, Steven AC. Virus maturation involving large subunit rotations and local refolding Science. 292: 744-748. PMID 11326105 DOI: 10.1126/Science.1058069  0.538
2001 Broo K, Wei J, Marshall D, Brown F, Smith TJ, Johnson JE, Schneemann A, Siuzdak G. Viral capsid mobility: a dynamic conduit for inactivation. Proceedings of the National Academy of Sciences of the United States of America. 98: 2274-2277. PMID 11226229 DOI: 10.1073/Pnas.051598298  0.379
2001 Tang L, Johnson KN, Ball LA, Lin T, Yeager M, Johnson JE. The structure of pariacoto virus reveals a dodecahedral cage of duplex RNA. Nature Structural Biology. 8: 77-83. PMID 11135676 DOI: 10.1038/83089  0.414
2000 Qu C, Liljas L, Opalka N, Brugidou C, Yeager M, Beachy RN, Fauquet CM, Johnson JE, Lin T. 3D domain swapping modulates the stability of members of an icosahedral virus group. Structure (London, England : 1993). 8: 1095-103. PMID 11080631 DOI: 10.1016/S0969-2126(00)00508-6  0.377
2000 Wikoff WR, Liljas L, Duda RL, Tsuruta H, Hendrix RW, Johnson JE. Topologically linked protein rings in the bacteriophage HK97 capsid Science. 289: 2129-2133. PMID 11000116 DOI: 10.1126/Science.289.5487.2129  0.397
2000 Wikoff WR, Schildkamp W, Johnson JE. Increased resolution data from a large unit cell crystal collected at a third-generation synchrotron X-ray source. Acta Crystallographica Section D-Biological Crystallography. 56: 890-893. PMID 10930835 DOI: 10.1107/S0907444900005941  0.324
2000 Canady MA, Tihova M, Hanzlik TN, Johnson JE, Yeager M. Large conformational changes in the maturation of a simple RNA virus, nudaurelia capensis omega virus (NomegaV). Journal of Molecular Biology. 299: 573-84. PMID 10835268 DOI: 10.1006/Jmbi.2000.3723  0.495
2000 Taylor KM, Lin T, Porta C, Mosser AG, Giesing HA, Lomonossoff GP, Johnson JE. Influence of three-dimensional structure on the immunogenicity of a peptide expressed on the surface of a plant virus. Journal of Molecular Recognition. 13: 71-82. PMID 10822251 DOI: 10.1002/(Sici)1099-1352(200003/04)13:2<71::Aid-Jmr489>3.0.Co;2-V  0.33
2000 Johnson JE, Chiu W. Structures of virus and virus-like particles. Current Opinion in Structural Biology. 10: 229-35. PMID 10753814 DOI: 10.1016/S0959-440X(00)00073-7  0.479
2000 Oliveira AC, Gomes AM, Almeida FC, Mohana-Borges R, Valente AP, Reddy VS, Johnson JE, Silva JL. Virus maturation targets the protein capsid to concerted disassembly and unfolding. The Journal of Biological Chemistry. 275: 16037-43. PMID 10748191 DOI: 10.1074/Jbc.M910145199  0.417
2000 Lata R, Conway JF, Cheng N, Duda RL, Hendrix RW, Wikoff WR, Johnson JE, Tsuruta H, Steven AC. Maturation dynamics of a viral capsid: Visualization of transitional intermediate states Cell. 100: 253-263. PMID 10660048 DOI: 10.1016/S0092-8674(00)81563-9  0.56
2000 Lin T, Chen Z, Usha R, Stauffacher CV, Dai JB, Schmidt T, Johnson JE. The refined crystal structure of cowpea mosaic virus at 2.8 A resolution. Virology. 265: 20-34. PMID 10603314 DOI: 10.1006/Viro.1999.0038  0.685
2000 Lin T, Clark AJ, Chen Z, Shanks M, Dai JB, Li Y, Schmidt T, Oxelfelt P, Lomonossoff GP, Johnson JE. Structural fingerprinting: subgrouping of comoviruses by structural studies of red clover mottle virus to 2.4-A resolution and comparisons with other comoviruses. Journal of Virology. 74: 493-504. PMID 10590139 DOI: 10.1128/Jvi.74.1.493-504.2000  0.421
2000 Zheng Y, Doerschuk PC, Johnson JE. Symmetry-constrained 3-D interpolation of viral X-ray crystallography data Ieee Transactions On Signal Processing. 48: 214-222. DOI: 10.1109/78.815491  0.303
2000 Doerschuk PC, Johnson JE. Ab initio reconstruction and experimental design for cryo electron microscopy Ieee Transactions On Information Theory. 46: 1714-1729. DOI: 10.1109/18.857786  0.335
1999 Krol MA, Olson NH, Tate J, Johnson JE, Baker TS, Ahlquist P. RNA-controlled polymorphism in the in vivo assembly of 180-subunit and 120-subunit virions from a single capsid protein. Proceedings of the National Academy of Sciences of the United States of America. 96: 13650-5. PMID 10570127 DOI: 10.1073/Pnas.96.24.13650  0.399
1999 Tate J, Liljas L, Scotti P, Christian P, Lin T, Johnson JE. The crystal structure of cricket paralysis virus: the first view of a new virus family. Nature Structural Biology. 6: 765-74. PMID 10426956 DOI: 10.1038/11543  0.454
1999 Bong DT, Steinem C, Janshoff A, Johnson JE, Reza Ghadiri M. A highly membrane-active peptide in Flock House virus: implications for the mechanism of nodavirus infection. Chemistry & Biology. 6: 473-81. PMID 10381406 DOI: 10.1016/S1074-5521(99)80065-9  0.307
1999 Wikoff WR, Johnson JE. Virus assembly: Imaging a molecular machine Current Biology. 9. PMID 10226016 DOI: 10.1016/S0960-9822(99)80183-3  0.42
1999 Taylor KM, Porta C, Lin T, Johnson JE, Barker PJ, Lomonossoff GP. Position-Dependent Processing of Peptides Presented on the Surface of Cowpea Mosaic Virus Biological Chemistry. 380: 387-392. PMID 10223342 DOI: 10.1515/Bc.1999.051  0.336
1999 Janshoff A, Bong DT, Steinem C, Johnson JE, Ghadiri MR. An animal virus-derived peptide switches membrane morphology: possible relevance to nodaviral transfection processes. Biochemistry. 38: 5328-36. PMID 10220319 DOI: 10.1021/Bi982976I  0.322
1999 Wikoff WR, Duda RL, Hendrix RW, Johnson JE. Crystallographic analysis of the dsDNA bacteriophage HK97 mature empty capsid Acta Crystallographica Section D: Biological Crystallography. 55: 763-771. PMID 10089306 DOI: 10.1107/S0907444998017661  0.39
1999 Bothner B, Schneeman A, Marshall D, Reddy V, Johnson JE, Siuzdak G. Crystallographically identical virus capsids display different properties in solution Nature Structural Biology. 6: 114-116. PMID 10048920 DOI: 10.1038/5799  0.343
1999 Rapaport DC, Johnson JE, Skolnick J. Supramolecular self-assembly: Molecular dynamics modeling of polyhedral shell formation Computer Physics Communications. 121: 231-235. DOI: 10.1016/S0010-4655(99)00319-7  0.323
1998 Munshi S, Liljas L, Johnson JE. Structure Determination of Nudaurelia capensis ω Virus Acta Crystallographica Section D-Biological Crystallography. 54: 1295-1305. PMID 10089506 DOI: 10.1107/S0907444998004454  0.379
1998 Johnson JE, Wikoff WR. Macromolecular assembly: Chainmail stabilization of a viral capsid Current Biology. 8. PMID 9889090 DOI: 10.1016/S0960-9822(98)00008-6  0.34
1998 Tsuruta H, Reddy VS, Wikoff WR, Johnson JE. Imaging Rna And Dynamic Protein Segments With Low-Resolution Virus Crystallography : Experimental Design, Data Processing And Implications Of Electron Density Maps Journal of Molecular Biology. 284: 1439-1452. PMID 9878362 DOI: 10.1006/Jmbi.1998.2231  0.392
1998 Johnson JE, Reddy VS. Biggest virus molecular structure yet Nature Structural & Molecular Biology. 5: 849-854. PMID 9783739 DOI: 10.1038/2288  0.46
1998 Natarajan P, Johnson JE. Molecular packing in virus crystals: geometry, chemistry, and biology. Journal of Structural Biology. 121: 295-305. PMID 9704501 DOI: 10.1006/Jsbi.1998.3982  0.442
1998 Dong XF, Natarajan P, Tihova M, Johnson JE, Schneemann A. Particle polymorphism caused by deletion of a peptide molecular switch in a quasiequivalent icosahedral virus. Journal of Virology. 72: 6024-33. PMID 9621065 DOI: 10.1128/Jvi.72.7.6024-6033.1998  0.422
1998 Fox JM, Wang G, Speir JA, Olson NH, Johnson JE, Baker TS, Young MJ. Comparison of the native CCMV virion with in vitro assembled CCMV virions by cryoelectron microscopy and image reconstruction Virology. 244: 212-218. PMID 9581792 DOI: 10.1006/Viro.1998.9107  0.398
1998 Wikoff WR, Duda RL, Hendrix RW, Johnson JE. Crystallization and preliminary x-ray analysis of the dsDNA bacteriophage HK97 mature empty capsid Virology. 243: 113-118. PMID 9527920 DOI: 10.1006/Viro.1998.9040  0.366
1998 Schneemann A, Reddy V, Johnson JE. The Structure and Function of Nodavirus Particles: A Paradigm for Understanding Chemical Biology Advances in Virus Research. 50: 381-446. PMID 9521003 DOI: 10.1016/S0065-3527(08)60812-X  0.446
1998 Chandrasekar V, Johnson JE. The structure of tobacco ringspot virus: A link in the evolution of icosahedral capsids in the picornavirus superfamily Structure. 6: 157-171. PMID 9519407 DOI: 10.1016/S0969-2126(98)00018-5  0.41
1998 Reddy VS, Giesing HA, Morton RT, Kumar A, Post CB, Brooks CL, Johnson JE. Energetics of quasiequivalence: computational analysis of protein-protein interactions in icosahedral viruses. Biophysical Journal. 74: 546-58. PMID 9449355 DOI: 10.1016/S0006-3495(98)77813-0  0.47
1998 Bothner B, Dong XF, Bibbs L, Johnson JE, Siuzdak G. Evidence of viral capsid dynamics using limited proteolysis mass spectrometry Journal of Biological Chemistry. 273: 673-676. PMID 9422714 DOI: 10.1074/Jbc.273.2.673  0.42
1997 Chandrasekar V, Munshi S, Johnson JE. Crystallization and preliminary X-ray analysis of tobacco ringspot virus. Acta Crystallographica Section D-Biological Crystallography. 53: 125-128. PMID 15299983 DOI: 10.1107/S0907444996011547  0.446
1997 Zlotnick A, Natarajan P, Munshi S, Johnson JE. Resolution of space-group ambiguity and structure determination of nodamura virus to 3.3 A resolution from pseudo-R32 (monoclinic) crystals. Acta Crystallographica. Section D, Biological Crystallography. 53: 738-46. PMID 15299863 DOI: 10.1107/S0907444997007427  0.453
1997 Gaspar LP, Johnson JE, Silva JL, Da Poian AT. Partially folded states of the capsid protein of cowpea severe mosaic virus in the disassembly pathway Journal of Molecular Biology. 273: 456-466. PMID 9344752 DOI: 10.1006/Jmbi.1997.1299  0.364
1997 Kumar A, Reddy VS, Yusibov V, Chipman PR, Hata Y, Fita I, Fukuyama K, Rossmann MG, Loesch-Fries LS, Baker TS, Johnson JE. The structure of alfalfa mosaic virus capsid protein assembled as a T=1 icosahedral particle at 4.0-A resolution. Journal of Virology. 71: 7911-6. PMID 9311881 DOI: 10.1128/Jvi.71.10.7911-7916.1997  0.586
1997 Johnson JE, Speir JA. Quasi-equivalent viruses: a paradigm for protein assemblies Journal of Molecular Biology. 269: 665-675. PMID 9223631 DOI: 10.1006/Jmbi.1997.1068  0.44
1997 Wikoff WR, Tsai CJ, Wang G, Baker TS, Johnson JE. The structure of cucumber mosaic virus: Cryoelectron microscopy, X-ray crystallography, and sequence analysis Virology. 232: 91-97. PMID 9185592 DOI: 10.1006/Viro.1997.8543  0.452
1997 Lin T, Porta C, Lomonossoff G, Johnson JE. Structure-based design of peptide presentation on a viral surface: the crystal structure of a plant/animal virus chimera at 2.8 A resolution. Folding & Design. 1: 179-87. PMID 9079380 DOI: 10.1016/S1359-0278(96)00030-2  0.413
1997 Flasinski S, Dzianott A, Speir JA, Johnson JE, Bujarski JJ. Structure-based rationale for the rescue of systemic movement of brome mosaic virus by spontaneous second-site mutations in the coat protein gene Journal of Virology. 71: 2500-2504. PMID 9032390 DOI: 10.1128/Jvi.71.3.2500-2504.1997  0.403
1996 Porta C, Spall VE, Lin T, Johnson JE, Lomonossoff GP. The development of cowpea mosaic virus as a potential source of novel vaccines. Intervirology. 39: 79-84. PMID 8957673 DOI: 10.1159/000150478  0.385
1996 Munshi S, Liljas L, Cavarelli J, Bomu W, McKinney B, Reddy V, Johnson JE. The 2.8 Å Structure of aT=4 Animal Virus and its Implications for Membrane Translocation of RNA Journal of Molecular Biology. 261: 1-10. PMID 8760498 DOI: 10.1006/Jmbi.1996.0437  0.378
1996 Lomonossoff GP, Johnson JE. Use of macromolecular assemblies as expression systems for peptides and synthetic vaccines. Current Opinion in Structural Biology. 6: 176-182. PMID 8728650 DOI: 10.1016/S0959-440X(96)80072-8  0.321
1996 Yusibov V, Kumar A, North A, Johnson JE, Loesch-Fries LS. Purification, characterization, assembly and crystallization of assembled alfalfa mosaic virus coat protein expressed in Escherichia coli. The Journal of General Virology. 77: 567-73. PMID 8627243 DOI: 10.1099/0022-1317-77-4-567  0.428
1996 Johnson JE. Functional implications of protein-protein interactions in icosahedral viruses Proceedings of the National Academy of Sciences of the United States of America. 93: 27-33. PMID 8552620 DOI: 10.1073/Pnas.93.1.27  0.411
1996 Chapman M, Tsao J, Rossmann M, Munshi S, Johnson J. Ab initiophase determination for viruses: the use of non-crystallographic symmetry for phase refinement Acta Crystallographica Section a Foundations of Crystallography. 52: C64-C64. DOI: 10.1107/S010876739609650X  0.479
1996 Lin T, Porta C, Lomonossoff G, Johnson JE. Structure-based design of peptide presentation on a viral surface: the crystal structure of a plant/animal virus chimera at 2.8 Å resolution Acta Crystallographica Section a Foundations of Crystallography. 52: C180-C180. DOI: 10.1107/S0108767396092094  0.406
1995 Muckelbauer JK, Kremer M, Minor I, Tong L, Zlotnick A, Johnson JE, Rossmann MG. Structure determination of coxsackievirus B3 to 3.5 A resolution. Acta Crystallographica. Section D, Biological Crystallography. 51: 871-87. PMID 15299757 DOI: 10.1107/S0907444995002253  0.741
1995 Zheng Y, Doerschuk PC, Johnson JE. Determination of three-dimensional low-resolution viral structure from solution x-ray scattering data Biophysical Journal. 69: 619-639. PMID 8527677 DOI: 10.1016/S0006-3495(95)79939-8  0.345
1995 Agrawal DK, Johnson JE. Assembly of the T = 4 Nudaurelia capensis ω Virus Capsid Protein, Post-Translational Cleavage, and Specific Encapsidation of Its mRNA in a Baculovirus Expression System Virology. 207: 89-97. PMID 7871755 DOI: 10.1006/Viro.1995.1054  0.427
1995 Speir JA, Munshi S, Wang G, Baker TS, Johnson JE. Structures of the native and swollen forms of cowpea chlorotic mottle virus determined by X-ray crystallography and cryo-electron microscopy Structure. 3: 63-78. PMID 7743132 DOI: 10.1016/S0969-2126(01)00135-6  0.488
1995 Kiyatkin AB, Natarajan P, Munshi S, Minor W, Johnson JE, Low PS. Crystallization and preliminary X-ray analysis of the cytoplasmic domain of human erythrocyte band 3. Proteins. 22: 293-7. PMID 7479704 DOI: 10.1002/Prot.340220312  0.342
1995 Lomonossoff G, Johnson*† JE. Eukaryotic viral expression systems for polypeptides Seminars in Virology. 6: 257-267. DOI: 10.1006/Smvy.1995.0031  0.374
1994 McKinney BR, Agrawal D, Fisher AJ, Johnson JE, Schneemann A, Rueckert RR. Production and crystallization of virus-like particles assembled in a heterologous protein expression system. Acta Crystallographica. Section D, Biological Crystallography. 50: 351-4. PMID 15299383 DOI: 10.1107/S090744499400123X  0.558
1994 Wery J, Reddy VS, Hosur MV, Johnson JE. The refined three-dimensional structure of an insect virus at 2.8 A resolution. Journal of Molecular Biology. 235: 565-586. PMID 8289282 DOI: 10.1006/Jmbi.1994.1014  0.434
1994 Cheng RH, Reddy VS, Olson NH, Fisher AJ, Baker TS, Johnson JE. Functional implications of quasi-equivalence in a T = 3 icosahedral animal virus established by cryo-electron microscopy and X-ray crystallography. Structure (London, England : 1993). 2: 271-82. PMID 8087554 DOI: 10.1016/S0969-2126(00)00029-0  0.602
1994 Johnson JE, Munshi S, Liljas L, Agrawal D, Olson NH, Reddy V, Fisher A, McKinney B, Schmidt T, Baker TS. Comparative studies of T = 3 and T = 4 icosahedral RNA insect viruses Archives of Virology. Supplementum. 9: 497-512. PMID 8032278 DOI: 10.1007/978-3-7091-9326-6_48  0.547
1994 Da Poian AT, Johnson JE, Silva JL. Differences in pressure stability of the three components of cowpea mosaic virus: Implications for virus assembly and disassembly Biochemistry. 33: 8339-8346. PMID 8031767 DOI: 10.1021/Bi00193A022  0.369
1994 Porta C, Spall VE, Loveland J, Johnson JE, Barker PJ, Lomonossoff GP. Development of cowpea mosaic virus as a high-yielding system for the presentation of foreign peptides. Virology. 202: 949-955. PMID 8030255 DOI: 10.1006/Viro.1994.1417  0.402
1994 Sehnke PC, Johnson JE. A chromatographic analysis of capsid protein isolated from alfalfa mosaic virus: zinc binding and proteolysis cause distinct charge heterogeneity. Virology. 204: 843-846. PMID 7941357 DOI: 10.1006/Viro.1994.1605  0.385
1994 Fox JM, Johnson JE, Young MJ. RNA/protein interactions in icosahedral virus assembly Seminars in Virology. 5: 51-60. DOI: 10.1006/Smvy.1994.1006  0.445
1993 Zlotnick A, McKinney BR, Munshi S, Bibler J, Rossmann MG, Johnson JE. A monoclinic crystal with R32 pseudo-symmetry: a preliminary report of Nodamura virus structure determination. Acta Crystallographica. Section D, Biological Crystallography. 49: 580-7. PMID 15299495 DOI: 10.1107/S0907444993007498  0.705
1993 Fisher AJ, McKinney BR, Schneemann A, Rueckert RR, Johnson JE. Crystallization of viruslike particles assembled from flock house virus coat protein expressed in a baculovirus system. Journal of Virology. 67: 2950-3. PMID 8474184 DOI: 10.1128/Jvi.67.5.2950-2953.1993  0.612
1993 Schneemann A, Dasgupta R, Johnson JE, Rueckert RR. Use of recombinant baculoviruses in synthesis of morphologically distinct viruslike particles of flock house virus, a nodavirus. Journal of Virology. 67: 2756-63. PMID 8474173 DOI: 10.1128/Jvi.67.5.2756-2763.1993  0.414
1993 Speir JA, Munshi S, Baker TS, Johnson JE. Preliminary X-ray data analysis of crystalline cowpea chlorotic mottle virus Virology. 193: 234-241. PMID 8438568 DOI: 10.1006/Viro.1993.1119  0.391
1993 Fisher AJ, Johnson JE. Ordered duplex RNA controls capsid architecture in an icosahedral animal virus. Nature. 361: 176-9. PMID 8421524 DOI: 10.1038/361176A0  0.614
1993 Sehnke PC, Johnson JE. Crystallization and preliminary X-ray characterization of tobacco streak virus and a proteolytically modified form of the capsid protein. Virology. 196: 328-331. PMID 8356802 DOI: 10.1006/Viro.1993.1483  0.351
1993 Li T, Johnson JE, Thomas GJ. Raman dynamic probe of hydrogen exchange in bean pod mottle virus: base-specific retardation of exchange in packaged ssRNA. Biophysical Journal. 65: 1963-72. PMID 8298026 DOI: 10.1016/S0006-3495(93)81272-4  0.353
1993 Usha R, Rohll JB, Spall VE, Shanks M, Maule AJ, Johnson JE, Lomonossoff GP. Expression of an animal virus antigenic site on the surface of a plant virus particle Virology. 197: 366-374. PMID 7692669 DOI: 10.1006/Viro.1993.1598  0.396
1992 Wang GJ, Porta C, Chen ZG, Baker TS, Johnson JE. Identification of a Fab interaction footprint site on an icosahedral virus by cryoelectron microscopy and X-ray crystallography. Nature. 355: 275-8. PMID 1731227 DOI: 10.1038/355275A0  0.393
1992 Li T, Chen Z, Johnson JE, Thomas GJ. Conformations, interactions, and thermostabilities of RNA and proteins in bean pod mottle virus: investigation of solution and crystal structures by laser Raman spectroscopy. Biochemistry. 31: 6673-6682. PMID 1637806 DOI: 10.1021/Bi00144A006  0.375
1992 Agrawal DK, Johnson JE. Sequence and analysis of the capsid protein of Nudaurelia capensis ω virus, an insect virus with T = 4 icosahedral symmetry Virology. 190: 806-814. PMID 1519360 DOI: 10.1016/0042-6822(92)90918-F  0.412
1992 Fisher AJ, McKinney BR, Wery JP, Johnson JE. Crystallization and preliminary data analysis of Flock House virus. Acta Crystallographica. Section B, Structural Science. 48: 515-20. PMID 1418822 DOI: 10.1107/S0108768192000053  0.558
1991 Lomonossoff GP, Johnson JE. The synthesis and structure of comovirus capsids. Progress in Biophysics & Molecular Biology. 55: 107-137. PMID 1871315 DOI: 10.1016/0079-6107(91)90003-B  0.32
1991 Olson NH, Baker TS, Johnson JE, Hendry DA. The three-dimensional structure of frozen-hydrated Nudaurelia capensis beta virus, a T = 4 insect virus. Journal of Structural Biology. 105: 111-22. PMID 1712620 DOI: 10.1016/1047-8477(90)90105-L  0.367
1991 Cavarelli J, Bomu W, Liljas L, Kim S, Minor W, Munshi S, Muchmore S, Schmidt T, Johnson J, Hendry DA. Crystallization and preliminary structure analysis of an insect virus with T=4 quasi-symmetry: Nudaurelia capensis ω virus Acta Crystallographica Section B Structural Science. 47: 23-29. DOI: 10.1107/S0108768190009326  0.439
1991 Johnson JE. Viruses getting their heads together Current Biology. 1: 287-289. DOI: 10.1016/0960-9822(91)90086-C  0.305
1990 Kaesberg P, Dasgupta R, Sgro JY, Wery JP, Selling BH, Hosur MV, Johnson JE. Structural homology among four nodaviruses as deduced by sequencing and X-ray crystallography. Journal of Molecular Biology. 214: 423-35. PMID 2116525 DOI: 10.1016/0022-2836(90)90191-N  0.425
1989 Chen ZG, Stauffacher C, Li Y, Schmidt T, Bomu W, Kamer G, Shanks M, Lomonossoff G, Johnson JE. Protein-RNA interactions in an icosahedral virus at 3.0 A resolution. Science (New York, N.Y.). 245: 154-9. PMID 2749253 DOI: 10.1126/Science.2749253  0.667
1989 Rossmann MG, Johnson JE. Icosahedral RNA virus structure. Annual Review of Biochemistry. 58: 533-73. PMID 2673017 DOI: 10.1146/Annurev.Bi.58.070189.002533  0.546
1989 Sehnke PC, Mason AM, Hood SJ, Lister RM, Johnson JE. A "zinc-finger"-type binding domain in tobacco streak virus coat protein. Virology. 168: 48-56. PMID 2491924 DOI: 10.1016/0042-6822(89)90402-9  0.387
1989 Dock-Bregeon AC, Chevrier B, Podjarny A, Johnson J, de Bear JS, Gough GR, Gilham PT, Moras D. Crystallographic structure of an RNA helix: [U(UA)6A]2 Journal of Molecular Biology. 209: 459-474. PMID 2479753 DOI: 10.1016/0022-2836(89)90010-7  0.532
1989 Wery JP, Johnson JE. Molecular biology at atomic resolution: the 2.8-.ANG. structure of an insect virus and its functional implications Analytical Chemistry. 61. DOI: 10.1021/Ac00198A001  0.392
1988 Dock-Bregeon AC, Chevrier B, Podjarny A, Moras D, DeBear JS, Gough GR, Gilham PT, Johnson JE. High resolution structure of the RNA duplex [U(U-A)6A]2 Nature. 335: 375-378. PMID 2458530 DOI: 10.1038/335375A0  0.555
1988 Sehnke PC, Harrington M, Hosur M, Li Y, Usha R, Craig Tucker R, Bomu W, Stauffacher CV, Johnson JE. Crystallization of viruses and virus proteins Journal of Crystal Growth. 90: 222-230. DOI: 10.1016/0022-0248(88)90319-3  0.695
1987 Hosur MV, Schmidt T, Tucker RC, Johnson JE, Gallagher TM, Selling BH, Rueckert RR. Structure of an insect virus at 3.0 A resolution Proteins. 2: 167-176. PMID 3447176 DOI: 10.1002/Prot.340020302  0.498
1987 Arnold E, Vriend G, Luo M, Griffith JP, Kamer G, Erickson JW, Johnson JE, Rossmann MG. The structure determination of a common cold virus, human rhinovirus 14 Acta Crystallographica Section a Foundations of Crystallography. 43: 346-361. DOI: 10.1107/S0108767387099306  0.657
1985 Virudachalam R, Harrington M, Johnson JE, Markley JL. 1H, 13C, and 31P nuclear magnetic resonance studies of cowpea mosaic virus: detection and exchange of polyamines and dynamics of the RNA. Virology. 141: 43-50. PMID 3976178 DOI: 10.1016/0042-6822(85)90181-3  0.316
1985 Rossmann MG, Arnold E, Erickson JW, Frankenberger EA, Griffith JP, Hecht HJ, Johnson JE, Kamer G, Luo M, Mosser AG. Structure of a human common cold virus and functional relationship to other picornaviruses. Nature. 317: 145-53. PMID 2993920 DOI: 10.1038/317145A0  0.555
1984 Hosur MV, Schmidt T, Tucker RC, Johnson JE, Selling BH, Rueckert RR. Black beetle virus--crystallization and particle symmetry. Virology. 133: 119-27. PMID 18639806 DOI: 10.1016/0042-6822(84)90430-6  0.438
1984 Usha R, Johnson JE, Moras D, Thierry JC, Fourme R, Kahn R. Macromolecular crystallography with synchrotron radiation: collection and processing of data from crystals with a very large unit cell Journal of Applied Crystallography. 17: 147-153. DOI: 10.1107/S0021889884011213  0.504
1983 Schmidt T, Johnson JE, Phillips WE. The spherically averaged structures of cowpea mosaic virus components by X-ray solution scattering. Virology. 127: 65-73. PMID 18638997 DOI: 10.1016/0042-6822(83)90371-9  0.359
1983 Fukuyama K, Abdel-Meguid SS, Johnson JE, Rossmann MG. Structure of a T = 1 aggregate of alfalfa mosaic virus coat protein seen at 4.5 A resolution. Journal of Molecular Biology. 167: 873-90. PMID 6876169 DOI: 10.1016/S0022-2836(83)80116-8  0.59
1981 Johnson JE, Hollingshead C. Crystallographic studies of cowpea mosaic virus by electron microscopy and x-ray diffraction. Journal of Ultrastructure Research. 74: 223-231. PMID 7241643 DOI: 10.1016/S0022-5320(81)80080-9  0.405
1981 Abad-Zapatero C, Abdel-Meguid SS, Johnson JE, Leslie AGW, Rayment I, Rossmann MG, Suck D, Tsukihara T. A description of techniques used in the structure determination of southern bean mosaic virus at 2.8 Å resolution Acta Crystallographica Section B Structural Crystallography and Crystal Chemistry. 37: 2002-2018. DOI: 10.1107/S0567740881007863  0.669
1980 Abad-Zapatero C, Abdel-Meguid SS, Johnson JE, Leslie AG, Rayment I, Rossmann MG, Suck D, Tsukihara T. Structure of southern bean mosaic virus at 2.8 A resolution. Nature. 286: 33-9. PMID 19711553 DOI: 10.1038/286033A0  0.71
1980 Murthy MR, Garavito RM, Johnson JE, Rossmann MG. Structure of lobster apo-D-glyceraldehyde-3-phosphate dehydrogenase at 3.0 A resolution. Journal of Molecular Biology. 138: 859-72. PMID 7411626 DOI: 10.1016/0022-2836(80)90069-8  0.736
1980 White JM, Johnson JE. Crystalline cowpea mosaic virus Virology. 101: 319-324. DOI: 10.1016/0042-6822(80)90513-9  0.399
1979 Rayment I, Johnson JE, Rossmann MG. Metal-free southern bean mosaic virus crystals. The Journal of Biological Chemistry. 254: 5243-5. PMID 36382  0.644
1978 Suck D, Rayment I, Johnson JE, Rossmann MG. The structure of southern bean mosaic virus at 5 A resolution. Virology. 85: 187-97. PMID 644881 DOI: 10.1016/0042-6822(78)90423-3  0.703
1978 Rayment I, Johnson JE, Suck D, Akimoto T, Rossmann MG, Lonberg-Holm K, Korant BD. An 11 Å-resolution electron density map of southern bean mosaic virus Acta Crystallographica Section B Structural Crystallography and Crystal Chemistry. 34: 567-578. DOI: 10.1107/S0567740878003556  0.65
1977 Argos P, Rossmann MG, Johnson JE. A four-helical super-secondary structure. Biochemical and Biophysical Research Communications. 75: 83-6. PMID 849312 DOI: 10.1016/0006-291X(77)91292-X  0.561
1977 Rayment I, Argos P, Johnson JE. Crystalline cowpea chlorotic mottle virus Journal of Ultrasructure Research. 61: 240-242. PMID 21302 DOI: 10.1016/S0022-5320(77)80091-9  0.626
1977 Rayment I, Johnson JE, Suck D. A method for preventing crystal slippage in macromolecular crystallography Journal of Applied Crystallography. 10: 365-365. DOI: 10.1107/S0021889877013703  0.528
1976 Johnson JE, Akimoto T, Suck D, Rayment I, Rossmann MG. The structure of southern bean mosaic virus at 22.5 a resolution. Virology. 75: 394-400. PMID 1006988 DOI: 10.1016/0042-6822(76)90037-4  0.672
1975 Akimoto T, Wagner MA, Johnson JE, Rossmann MG. The packing of southern bean mosaic virus in various crystal cells. Journal of Ultrastructure Research. 53: 306-18. PMID 1206779 DOI: 10.1016/S0022-5320(75)80032-3  0.57
1975 Johnson JE, Argos P, Rossmann MG. Rotation function studies of southern bean mosaic virus at 22 Å resolution Acta Crystallographica Section B Structural Crystallography and Crystal Chemistry. 31: 2577-2583. DOI: 10.1107/S0567740875008242  0.542
1974 Johnson JE, Rossmann MG, Smiley IE, Wagner MA. Single crystal x-ray diffraction studies of Southern bean mosaic virus. Journal of Ultrastructure Research. 46: 441-51. PMID 4827202 DOI: 10.1016/S0022-5320(74)90066-5  0.566
1973 Johnson JE, Jacobson RA. The crystal and molecular structure of di(2-pyridyl)amine Acta Crystallographica Section B Structural Crystallography and Crystal Chemistry. 29: 1669-1674. DOI: 10.1107/S0567740873005236  0.526
1973 Johnson JE, Jacobson RA. Crystal and molecular structure of di[iodobis-(2,2′-bipyridylamine)copper(II)] iodide perchlorate Journal of the Chemical Society-Dalton Transactions. 580-584. DOI: 10.1039/Dt9730000580  0.523
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