Yuanchao Zhang - Publications

Affiliations: 
Genetics / Biomedical and Health Informatics Rutgers University / The Children's Hospital of Philadelphia 

12 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Guarnieri JW, Dybas JM, Fazelinia H, Kim MS, Frere J, Zhang Y, Soto Albrecht Y, Murdock DG, Angelin A, Singh LN, Weiss SL, Best SM, Lott MT, Zhang S, Cope H, et al. Core mitochondrial genes are down-regulated during SARS-CoV-2 infection of rodent and human hosts. Science Translational Medicine. 15: eabq1533. PMID 37556555 DOI: 10.1126/scitranslmed.abq1533  0.681
2023 Ha MH, Kim MS, An HJ, Sung MJ, Lee YH, Yang DH, Jung SH, Baek J, Choi Y, Taylor DM, Zhang Y, Lee SY, Jeong HY. PTEN-induced kinase 1 is associated with renal aging, via the cGAS-STING pathway. Aging Cell. e13865. PMID 37183600 DOI: 10.1111/acel.13865  0.502
2022 Guarnieri JW, Dybas JM, Fazelinia H, Kim MS, Frere J, Zhang Y, Albrecht YS, Murdock DG, Angelin A, Singh LN, Weiss SL, Best SM, Lott MT, Cope H, Zaksas V, et al. Targeted Down Regulation Of Core Mitochondrial Genes During SARS-CoV-2 Infection. Biorxiv : the Preprint Server For Biology. PMID 35233572 DOI: 10.1101/2022.02.19.481089  0.679
2021 Skalenko KS, Li L, Zhang Y, Vvedenskaya IO, Winkelman JT, Cope AL, Taylor DM, Shah P, Ebright RH, Kinney JB, Zhang Y, Nickels BE. Promoter-sequence determinants and structural basis of primer-dependent transcription initiation in . Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34187896 DOI: 10.1073/pnas.2106388118  0.325
2020 da Silveira WA, Fazelinia H, Rosenthal SB, Laiakis EC, Kim MS, Meydan C, Kidane Y, Rathi KS, Smith SM, Stear B, Ying Y, Zhang Y, Foox J, Zanello S, Crucian B, et al. Comprehensive Multi-omics Analysis Reveals Mitochondrial Stress as a Central Biological Hub for Spaceflight Impact. Cell. 183: 1185-1201.e20. PMID 33242417 DOI: 10.1016/j.cell.2020.11.002  0.544
2020 Winkelman JT, Pukhrambam C, Vvedenskaya IO, Zhang Y, Taylor DM, Shah P, Ebright RH, Nickels BE. XACT-Seq Comprehensively Defines the Promoter-Position and Promoter-Sequence Determinants for Initial-Transcription Pausing. Molecular Cell. PMID 32750314 DOI: 10.1016/J.Molcel.2020.07.006  0.613
2020 Zhang Y, Kim MS, Reichenberger ER, Stear B, Taylor DM. Scedar: A scalable Python package for single-cell RNA-seq exploratory data analysis. Plos Computational Biology. 16: e1007794. PMID 32339163 DOI: 10.1371/Journal.Pcbi.1007794  0.635
2019 Taylor DM, Aronow BJ, Tan K, Bernt K, Salomonis N, Greene CS, Frolova A, Henrickson SE, Wells A, Pei L, Jaiswal JK, Whitsett J, Hamilton KE, MacParland SA, Kelsen J, ... ... Zhang Y, et al. The Pediatric Cell Atlas: Defining the Growth Phase of Human Development at Single-Cell Resolution. Developmental Cell. PMID 30930166 DOI: 10.1016/J.Devcel.2019.03.001  0.617
2018 Vvedenskaya IO, Bird JG, Zhang Y, Zhang Y, Jiao X, Barvík I, Krásný L, Kiledjian M, Taylor DM, Ebright RH, Nickels BE. CapZyme-Seq Comprehensively Defines Promoter-Sequence Determinants for RNA 5' Capping with NAD. Molecular Cell. PMID 29681497 DOI: 10.1016/J.Molcel.2018.03.014  0.599
2016 Vvedenskaya IO, Vahedian-Movahed H, Zhang Y, Taylor DM, Ebright RH, Nickels BE. Interactions between RNA polymerase and the core recognition element are a determinant of transcription start site selection. Proceedings of the National Academy of Sciences of the United States of America. PMID 27162333 DOI: 10.1073/Pnas.1603271113  0.61
2016 Winkelman JT, Vvedenskaya IO, Zhang Y, Zhang Y, Bird JG, Taylor DM, Gourse RL, Ebright RH, Nickels BE. Multiplexed protein-DNA cross-linking: Scrunching in transcription start site selection. Science (New York, N.Y.). 351: 1090-3. PMID 26941320 DOI: 10.1126/Science.Aad6881  0.602
2015 Vvedenskaya IO, Zhang Y, Goldman SR, Valenti A, Visone V, Taylor DM, Ebright RH, Nickels BE. Massively Systematic Transcript End Readout, "MASTER": Transcription Start Site Selection, Transcriptional Slippage, and Transcript Yields. Molecular Cell. PMID 26626484 DOI: 10.1016/J.Molcel.2015.10.029  0.621
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