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Shih-Long Tu - Publications

Affiliations: 
2002-2005 Molecular and Cellular Biology University of California, Davis, Davis, CA 
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19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Chong GL, Tu SL. RNA-seq analysis of alternative pre-mRNA splicing regulation mediated by photoreceptors in Physcomitrium patens. Methods in Enzymology. 683: 227-241. PMID 37087189 DOI: 10.1016/bs.mie.2022.08.022  0.326
2022 Liu WY, Yu CP, Chang CK, Chen HJ, Li MY, Chen YH, Shiu SH, Ku MSB, Tu SL, Lu MJ, Li WH. Regulators of early maize leaf development inferred from transcriptomes of laser capture microdissection (LCM)-isolated embryonic leaf cells. Proceedings of the National Academy of Sciences of the United States of America. 119: e2208795119. PMID 36001691 DOI: 10.1073/pnas.2208795119  0.31
2022 Pan ZJ, Nien YC, Shih YA, Chen TY, Lin WD, Kuo WH, Hsu HC, Tu SL, Chen JC, Wang CN. Transcriptomic Analysis Suggests Auxin Regulation in Dorsal-Ventral Petal Asymmetry of Wild Progenitor . International Journal of Molecular Sciences. 23. PMID 35216188 DOI: 10.3390/ijms23042073  0.321
2021 Chang P, Hsieh HY, Tu SL. The U1 snRNP component RBP45d regulates temperature-responsive flowering in Arabidopsis. The Plant Cell. PMID 34791475 DOI: 10.1093/plcell/koab273  0.331
2021 Wang CC, Hsieh HY, Hsieh HL, Tu SL. The Physcomitrella patens chromatin adaptor PpMRG1 interacts with H3K36me3 and regulates light-responsive alternative splicing. Plant Physiology. PMID 33793927 DOI: 10.1093/plphys/kiaa103  0.346
2020 Liu WY, Lin HH, Yu CP, Chang CK, Chen HJ, Lin JJ, Lu MJ, Tu SL, Shiu SH, Wu SH, Ku MSB, Li WH. Maize ANT1 modulates vascular development, chloroplast development, photosynthesis, and plant growth. Proceedings of the National Academy of Sciences of the United States of America. PMID 32817425 DOI: 10.1073/Pnas.2012245117  0.67
2019 Lin BY, Shih CJ, Tu SL. Phytochrome coordinates with a hnRNP to regulate alternative splicing via an exonic splicing silencer. Plant Physiology. PMID 31501299 DOI: 10.1104/pp.19.00289  0.3
2019 Shih CJ, Chen HW, Hsieh HY, Lai YH, Chiu FY, Chen YR, Tu SL. Heterogeneous Nuclear Ribonucleoprotein H1 Coordinates with Phytochrome and the U1 snRNP Complex to Regulate Alternative Splicing in Physcomitrella patens. The Plant Cell. PMID 31409629 DOI: 10.1105/tpc.19.00314  0.322
2019 Chang YM, Lin HH, Liu WY, Yu CP, Chen HJ, Wartini PP, Kao YY, Wu YH, Lin JJ, Lu MJ, Tu SL, Wu SH, Shiu SH, Ku MSB, Li WH. Comparative transcriptomics method to infer gene coexpression networks and its applications to maize and rice leaf transcriptomes. Proceedings of the National Academy of Sciences of the United States of America. PMID 30718437 DOI: 10.1073/Pnas.1817621116  0.663
2018 Cheng YL, Tu SL. Alternative Splicing and Crosstalk with Light Signaling. Plant & Cell Physiology. PMID 29727006 DOI: 10.1093/pcp/pcy089  0.372
2017 Huang CF, Yu CP, Wu YH, Lu MJ, Tu SL, Wu SH, Shiu SH, Ku MSB, Li WH. Elevated auxin biosynthesis and transport underlie high vein density in C4 leaves. Proceedings of the National Academy of Sciences of the United States of America. PMID 28761000 DOI: 10.1073/pnas.1709171114  0.637
2016 Huang CF, Chang YM, Lin JJ, Yu CP, Lin HH, Liu WY, Yeh S, Tu SL, Wu SH, Ku MS, Li WH. Insights into the regulation of C4 leaf development from comparative transcriptomic analysis. Current Opinion in Plant Biology. 30: 1-10. PMID 26828378 DOI: 10.1016/J.Pbi.2015.12.011  0.649
2014 Wu HP, Su YS, Chen HC, Chen YR, Wu CC, Lin WD, Tu SL. Genome-wide analysis of light-regulated alternative splicing mediated by photoreceptors in Physcomitrella patens. Genome Biology. 15: R10. PMID 24398233 DOI: 10.1186/gb-2014-15-1-r10  0.684
2012 Chen YR, Su YS, Tu SL. Distinct phytochrome actions in nonvascular plants revealed by targeted inactivation of phytobilin biosynthesis. Proceedings of the National Academy of Sciences of the United States of America. 109: 8310-5. PMID 22566621 DOI: 10.1073/pnas.1201744109  0.701
2007 Tu SL, Rockwell NC, Lagarias JC, Fisher AJ. Insight into the radical mechanism of phycocyanobilin-ferredoxin oxidoreductase (PcyA) revealed by X-ray crystallography and biochemical measurements Biochemistry. 46: 1484-1494. PMID 17279614 DOI: 10.1021/Bi062038F  0.598
2006 Tu SL, Sughrue W, Britt RD, Lagarias JC. A conserved histidine-aspartate pair is required for exovinyl reduction of biliverdin by a cyanobacterial phycocyanobilin:ferredoxin oxidoreductase Journal of Biological Chemistry. 281: 3127-3136. PMID 16327013 DOI: 10.1074/Jbc.M510126200  0.475
2005 Tu S, Gunn A, Toney MD, Britt RD, Lagarias JC. Biliverdin Reduction by Cyanobacterial Phycocyanobilin:Ferredoxin Oxidoreductase (PcyA) Proceeds via Linear Tetrapyrrole Radical Intermediates [J. Am. Chem. Soc.2004,126, 8682−8693]. Journal of the American Chemical Society. 127: 3230-3231. DOI: 10.1021/Ja059902W  0.398
2004 Tu SL, Chen LJ, Smith MD, Su YS, Schnell DJ, Li HM. Import pathways of chloroplast interior proteins and the outer-membrane protein OEP14 converge at Toc75. The Plant Cell. 16: 2078-88. PMID 15258267 DOI: 10.1105/Tpc.104.023952  0.633
2004 Tu SL, Gunn A, Toney MD, Britt RD, Lagarias JC. Biliverdin reduction by cyanobacterial phycocyanobilin:ferredoxin oxidoreductase (PcyA) proceeds via linear tetrapyrrole radical intermediates. Journal of the American Chemical Society. 126: 8682-93. PMID 15250720 DOI: 10.1021/Ja049280Z  0.475
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