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Nihar Ranjan - Publications

Affiliations: 
Bioorganic and Medicinal Chemistry Clemson University, Clemson, SC, United States 
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37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 M M, Patidar RK, Tiwari R, Srivastava N, Ranjan N. Nile Blue: A Red-Emissive Fluorescent Dye That Displays Differential Self-Assembly and Binding to G-Quadruplexes. The Journal of Physical Chemistry. B. PMID 37956021 DOI: 10.1021/acs.jpcb.3c05084  0.776
2023 Metangle S, Ranjan N. Preferential Binding of a Red Emissive Julolidine Derivative to a Promoter G-quadruplex. Chembiochem : a European Journal of Chemical Biology. e202300527. PMID 37926689 DOI: 10.1002/cbic.202300527  0.535
2023 Ranjan N, Arya DP. Parallel G-quadruplex recognition by neomycin. Frontiers in Chemistry. 11: 1232514. PMID 37671393 DOI: 10.3389/fchem.2023.1232514  0.712
2023 Patidar RK, Tiwari K, Tiwari R, Ranjan N. Promoter G-Quadruplex Binding Styryl Benzothiazolium Derivative for Applications in Ligand Affinity Ranking and as Ethidium Bromide Substitute in Gel Staining. Acs Applied Bio Materials. PMID 37229607 DOI: 10.1021/acsabm.3c00060  0.805
2023 Singh L, Ranjan N. Highly Selective and Sensitive Detection of Nitrite Ion by an Unusual Nitration of a Fluorescent Benzimidazole. Journal of the American Chemical Society. 145: 2745-2749. PMID 36716209 DOI: 10.1021/jacs.2c10850  0.368
2022 Verma S, Patidar RK, Tiwari R, Velayutham R, Ranjan N. Fragment-Based Design of Small Molecules to Study DNA Minor Groove Recognition. The Journal of Physical Chemistry. B. PMID 36112099 DOI: 10.1021/acs.jpcb.2c04825  0.739
2022 Verma S, Patidar RK, Tiwari K, Tiwari R, Baranwal J, Velayutham R, Ranjan N. Preferential Recognition of Human Telomeric G-Quadruplex DNA by a Red-Emissive Molecular Rotor. The Journal of Physical Chemistry. B. PMID 36103341 DOI: 10.1021/acs.jpcb.2c04418  0.751
2022 Ekal NS, Patil R, Ranjan N, Bahadur P, Tiwari S. Oxidation state of graphene oxide nanosheets drives their interaction with proteins: A case of bovine serum albumin. Colloids and Surfaces. B, Biointerfaces. 212: 112367. PMID 35114436 DOI: 10.1016/j.colsurfb.2022.112367  0.294
2022 Ghosh A, Ranjan N, Jiang L, Ansari AH, Degyatoreva N, Ahluwalia S, Arya DP, Maiti S. Fine-tuning miR-21 expression and inhibition of EMT in breast cancer cells using aromatic-neomycin derivatives. Molecular Therapy. Nucleic Acids. 27: 685-698. PMID 35070496 DOI: 10.1016/j.omtn.2021.12.027  0.566
2021 Deshmukh SK, Agrawal S, Gupta MK, Patidar RK, Ranjan N. Recent Advances in the Discovery of Antiviral Metabolites from Fungi. Current Pharmaceutical Biotechnology. PMID 34132180 DOI: 10.2174/1389201022666210615120720  0.787
2021 Verma S, Ravichandiran V, Ranjan N. Beyond amyloid proteins: Thioflavin T in nucleic acid recognition. Biochimie. PMID 34118329 DOI: 10.1016/j.biochi.2021.06.003  0.793
2021 Parameswaran P, Arora Y, Patidar R, Ranjan N. Bacterial rRNA A-site recognition by DAPI: Signatures of intercalative binding. Biophysical Chemistry. 274: 106589. PMID 33901777 DOI: 10.1016/j.bpc.2021.106589  0.802
2021 Verma S, Ravichandiran V, Ranjan N. Selective, pH sensitive, "turn on" fluorescence sensing of carbonate ions by a benzimidazole. Spectrochimica Acta. Part a, Molecular and Biomolecular Spectroscopy. 255: 119624. PMID 33789191 DOI: 10.1016/j.saa.2021.119624  0.742
2020 Ranjan N, Andreasen KF, Arora Y, Xue L, Arya DP. Surface Dependent Dual Recognition of a G-quadruplex DNA With Neomycin-Intercalator Conjugates. Frontiers in Chemistry. 8: 60. PMID 32117884 DOI: 10.3389/Fchem.2020.00060  0.756
2019 Parameswaran P, Ranjan N, Flora SJS. New Approaches in Sensing and Targeting Bacterial rRNA A-site. Medicinal Chemistry (Shariqah (United Arab Emirates)). PMID 31660840 DOI: 10.2174/1573406415666191011160035  0.397
2019 Chamberlin J, Story S, Ranjan N, Chesser G, Arya DP. Gram-negative synergy and mechanism of action of alkynyl bisbenzimidazoles. Scientific Reports. 9: 14171. PMID 31578425 DOI: 10.1038/S41598-019-48898-4  0.62
2019 Ranjan N, Arya DP. A fluorescent aminosugar to rapidly screen and study RNA binders. Methods in Enzymology. 623: 291-314. PMID 31239051 DOI: 10.1016/Bs.Mie.2019.05.027  0.706
2019 Verma S, Ravichandiran V, Ranjan N, Flora SJS. Recent Advances in Therapeutic Applications of Bisbenzimidazoles. Medicinal Chemistry (Shariqah (United Arab Emirates)). PMID 31038072 DOI: 10.2174/1573406415666190416120801  0.779
2018 Verma S, Ghuge SA, Ravichandiran V, Ranjan N. Spectroscopic studies of Thioflavin-T binding to c-Myc G-quadruplex DNA. Spectrochimica Acta. Part a, Molecular and Biomolecular Spectroscopy. 212: 388-395. PMID 30703662 DOI: 10.1016/j.saa.2018.12.044  0.829
2018 Bhaduri S, Ranjan N, Arya DP. An overview of recent advances in duplex DNA recognition by small molecules. Beilstein Journal of Organic Chemistry. 14: 1051-1086. PMID 29977379 DOI: 10.3762/Bjoc.14.93  0.733
2017 Deshmukh SK, Prakash V, Ranjan N. Marine Fungi: A Source of Potential Anticancer Compounds. Frontiers in Microbiology. 8: 2536. PMID 29354097 DOI: 10.3389/fmicb.2017.02536  0.341
2017 Thamban Chandrika N, Shrestha SK, Ranjan N, Sharma A, Arya DP, Garneau-Tsodikova S. New Application of Neomycin B-Bisbenzimidazole Hybrids as Antifungal Agents. Acs Infectious Diseases. PMID 29227087 DOI: 10.1021/Acsinfecdis.7B00254  0.608
2017 Ranjan N, Kellish P, King A, Arya DP. Impact of Linker Length and Composition on Fragment Binding and Cell Permeation: Story of a Bisbenzimidazole Dye Fragment. Biochemistry. PMID 29131946 DOI: 10.1021/Acs.Biochem.7B00929  0.714
2017 Ranjan N, Story S, Fulcrand G, Leng F, Ahmad M, King A, Sur S, Wang W, Tse-Dinh YC, Arya DP. Selective Inhibition of E. coli RNA and DNA Topoisomerase I by Hoechst 33258 Derived Mono and Bisbenzimidazoles. Journal of Medicinal Chemistry. PMID 28513176 DOI: 10.1021/Acs.Jmedchem.7B00191  0.706
2016 Ranjan N, Arya DP. Linker dependent intercalation of bisbenzimidazole-aminosugars in an RNA duplex; selectivity in RNA vs. DNA binding. Bioorganic & Medicinal Chemistry Letters. PMID 27884695 DOI: 10.1016/J.Bmcl.2016.10.076  0.71
2016 Kumar S, Ranjan N, Kellish P, Gong C, Watkins D, Arya DP. Multivalency in the recognition and antagonism of a HIV TAR RNA-TAT assembly using an aminoglycoside benzimidazole scaffold. Organic & Biomolecular Chemistry. 14: 2052-6. PMID 26765486 DOI: 10.1039/C5Ob02016F  0.645
2015 Nahar S, Ranjan N, Ray A, Arya DP, Maiti S. Potent inhibition of miR-27a by neomycin-bisbenzimidazole conjugates. Chemical Science. 6: 5837-5846. PMID 29861909 DOI: 10.1039/C5Sc01969A  0.632
2014 Ranjan N, Fulcrand G, King A, Brown J, Jiang X, Leng F, Arya DP. Selective Inhibition of Bacterial Topoisomerase I by alkynyl-bisbenzimidazoles. Medchemcomm. 5: 816-825. PMID 25083189 DOI: 10.1039/C4Md00140K  0.647
2014 Woo CM, Ranjan N, Arya DP, Herzon SB. Analysis of diazofluorene DNA binding and damaging activity: DNA cleavage by a synthetic monomeric diazofluorene. Angewandte Chemie (International Ed. in English). 53: 9325-8. PMID 25044348 DOI: 10.1002/Anie.201404137  0.704
2013 Ranjan N, Arya DP. Targeting C-myc G-quadruplex: dual recognition by aminosugar-bisbenzimidazoles with varying linker lengths. Molecules (Basel, Switzerland). 18: 14228-40. PMID 24252993 DOI: 10.3390/Molecules181114228  0.71
2013 Watkins D, Ranjan N, Kumar S, Gong C, Arya DP. An assay for human telomeric G-quadruplex DNA binding drugs. Bioorganic & Medicinal Chemistry Letters. 23: 6695-9. PMID 24246738 DOI: 10.1016/J.Bmcl.2013.10.030  0.754
2013 Ranjan N, Kumar S, Watkins D, Wang D, Appella DH, Arya DP. Recognition of HIV-TAR RNA using neomycin-benzimidazole conjugates. Bioorganic & Medicinal Chemistry Letters. 23: 5689-93. PMID 24012122 DOI: 10.1016/J.Bmcl.2013.08.014  0.681
2013 King A, Watkins D, Kumar S, Ranjan N, Gong C, Whitlock J, Arya DP. Characterization of ribosomal binding and antibacterial activities using two orthogonal high-throughput screens. Antimicrobial Agents and Chemotherapy. 57: 4717-26. PMID 23856777 DOI: 10.1128/Aac.00671-13  0.662
2013 Ranjan N, Davis E, Xue L, Arya DP. Dual recognition of the human telomeric G-quadruplex by a neomycin-anthraquinone conjugate. Chemical Communications (Cambridge, England). 49: 5796-8. PMID 23698792 DOI: 10.1039/C3Cc42721H  0.741
2011 Xi H, Davis E, Ranjan N, Xue L, Hyde-Volpe D, Arya DP. Thermodynamics of nucleic acid "shape readout" by an aminosugar. Biochemistry. 50: 9088-113. PMID 21863895 DOI: 10.1021/Bi201077H  0.763
2011 Xue L, Ranjan N, Arya DP. Synthesis and spectroscopic studies of the aminoglycoside (neomycin)--perylene conjugate binding to human telomeric DNA. Biochemistry. 50: 2838-49. PMID 21329360 DOI: 10.1021/Bi1017304  0.777
2010 Ranjan N, Andreasen KF, Kumar S, Hyde-Volpe D, Arya DP. Aminoglycoside binding to Oxytricha nova telomeric DNA. Biochemistry. 49: 9891-903. PMID 20886815 DOI: 10.1021/Bi101517E  0.775
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