Christian L. Barrett, Ph.D.
Affiliations: | 2001 | University of California, Santa Cruz, Santa Cruz, CA, United States |
Area:
Computer Science, Molecular BiologyGoogle:
"Christian Barrett"Mean distance: (not calculated yet)
Parents
Sign in to add mentor| Kevin Karplus | grad student | 2001 | UC Santa Cruz | |
| (Investigation of non-pairwise protein structure score functions using sets of decoy structures.) | ||||
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Publications
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| Holm F, Hellqvist E, Mason CN, et al. (2015) Reversion to an embryonic alternative splicing program enhances leukemia stem cell self-renewal. Proceedings of the National Academy of Sciences of the United States of America |
| Barrett CL, Cho BK, Palsson BO. (2011) Sensitive and accurate identification of protein-DNA binding events in ChIP-chip assays using higher order derivative analysis. Nucleic Acids Research. 39: 1656-65 |
| Nagarajan H, Butler JE, Klimes A, et al. (2010) De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads. Plos One. 5: e10922 |
| Cho BK, Zengler K, Qiu Y, et al. (2009) The transcription unit architecture of the Escherichia coli genome. Nature Biotechnology. 27: 1043-9 |
| Cho BK, Barrett CL, Knight EM, et al. (2008) Genome-scale reconstruction of the Lrp regulatory network in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 105: 19462-7 |
| Katzman S, Barrett C, Thiltgen G, et al. (2008) PREDICT-2ND: a tool for generalized protein local structure prediction. Bioinformatics (Oxford, England). 24: 2453-9 |
| Barrett CL, Palsson BO. (2006) Iterative reconstruction of transcriptional regulatory networks: an algorithmic approach. Plos Computational Biology. 2: e52 |
| Barrett CL, Herring CD, Reed JL, et al. (2005) The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states. Proceedings of the National Academy of Sciences of the United States of America. 102: 19103-8 |
| Karplus K, Karchin R, Barrett C, et al. (2001) What is the value added by human intervention in protein structure prediction? Proteins. 86-91 |
| Karplus K, Barrett C, Cline M, et al. (1999) Predicting protein structure using only sequence information Proteins. 37: 121-125 |