| Year |
Citation |
Score |
| 2021 |
Juarez-Quintero V, Peralta-Castro A, Benítez Cardoza CG, Ellenberger T, Brieba LG. Structure of an open conformation of T7 DNA polymerase reveals novel structural features regulating primer-template stabilization at the polymerization active site. The Biochemical Journal. 478: 2665-2679. PMID 34160020 DOI: 10.1042/BCJ20200922 |
0.528 |
|
| 2020 |
Hammel M, Rashid I, Sverzhinsky A, Pourfarjam Y, Tsai MS, Ellenberger T, Pascal JM, Kim IK, Tainer JA, Tomkinson AE. An atypical BRCT-BRCT interaction with the XRCC1 scaffold protein compacts human DNA Ligase IIIα within a flexible DNA repair complex. Nucleic Acids Research. PMID 33330937 DOI: 10.1093/nar/gkaa1188 |
0.484 |
|
| 2019 |
Houl JH, Ye Z, Brosey CA, Balapiti-Modarage LPF, Namjoshi S, Bacolla A, Laverty D, Walker BL, Pourfarjam Y, Warden LS, Babu Chinnam N, Moiani D, Stegeman RA, Chen MK, Hung MC, ... ... Ellenberger T, et al. Selective small molecule PARG inhibitor causes replication fork stalling and cancer cell death. Nature Communications. 10: 5654. PMID 31827085 DOI: 10.1038/S41467-019-13508-4 |
0.353 |
|
| 2019 |
Foster BM, Rosenberg D, Salvo H, Stephens KL, Bintz BJ, Hammel M, Ellenberger T, Gainey MD, Wallen JR. Combined Solution and Crystal Methods Reveal the Electrostatic Tethers That Provide a Flexible Platform for Replication Activities in the Bacteriophage T7 Replisome. Biochemistry. PMID 31659895 DOI: 10.1021/Acs.Biochem.9B00525 |
0.604 |
|
| 2017 |
Wallen JR, Zhang H, Weis C, Cui W, Foster BM, Ho CM, Hammel M, Tainer JA, Gross ML, Ellenberger T. Hybrid Methods Reveal Multiple Flexibly Linked DNA Polymerases within the Bacteriophage T7 Replisome. Structure (London, England : 1993). 25: 157-166. PMID 28052235 DOI: 10.1016/J.Str.2016.11.019 |
0.584 |
|
| 2017 |
Kukshal V, Ellenberger T. How does a zinc finger promote DNA end joining?”: Human DNA Ligase III F1000research. 6. DOI: 10.7490/F1000Research.1115174.1 |
0.536 |
|
| 2017 |
Kukshal V, Ellenberger T. Insight into intermolecular DNA ligation mechanism of DNA Ligase III F1000research. 6. DOI: 10.7490/F1000Research.1114259.1 |
0.543 |
|
| 2016 |
Brosey CA, Ho C, Long WZ, Singh S, Burnett K, Hura GL, Nix JC, Bowman GR, Ellenberger T, Tainer JA. Defining NADH-Driven Allostery Regulating Apoptosis-Inducing Factor. Structure (London, England : 1993). PMID 27818101 DOI: 10.1016/J.Str.2016.09.012 |
0.35 |
|
| 2015 |
Cheruiyot A, Paudyal SC, Kim IK, Sparks M, Ellenberger T, Piwnica-Worms H, You Z. Poly(ADP-ribose)-binding promotes Exo1 damage recruitment and suppresses its nuclease activities. Dna Repair. 35: 106-115. PMID 26519824 DOI: 10.1016/J.Dnarep.2015.09.021 |
0.596 |
|
| 2015 |
Kukshal V, Kim IK, Hura GL, Tomkinson AE, Tainer JA, Ellenberger T. Human DNA ligase III bridges two DNA ends to promote specific intermolecular DNA end joining. Nucleic Acids Research. 43: 7021-31. PMID 26130724 DOI: 10.1093/Nar/Gkv652 |
0.594 |
|
| 2015 |
Pascal JM, Ellenberger T. The rise and fall of poly(ADP-ribose): An enzymatic perspective. Dna Repair. 32: 10-6. PMID 25963443 DOI: 10.1016/J.Dnarep.2015.04.008 |
0.39 |
|
| 2015 |
Chen X, Kim IK, Honaker Y, Paudyal SC, Koh WK, Sparks M, Li S, Piwnica-Worms H, Ellenberger T, You Z. 14-3-3 proteins restrain the Exo1 nuclease to prevent overresection. The Journal of Biological Chemistry. 290: 12300-12. PMID 25833945 DOI: 10.1074/Jbc.M115.644005 |
0.566 |
|
| 2015 |
Ghisays F, Brace CS, Yackly SM, Kwon HJ, Mills KF, Kashentseva E, Dmitriev IP, Curiel DT, Imai SI, Ellenberger T. The N-Terminal Domain of SIRT1 Is a Positive Regulator of Endogenous SIRT1-Dependent Deacetylation and Transcriptional Outputs. Cell Reports. PMID 25772354 DOI: 10.1016/J.Celrep.2015.02.036 |
0.649 |
|
| 2015 |
Kim IK, Stegeman RA, Brosey CA, Ellenberger T. A quantitative assay reveals ligand specificity of the DNA scaffold repair protein XRCC1 and efficient disassembly of complexes of XRCC1 and the poly(ADP-ribose) polymerase 1 by poly(ADP-ribose) glycohydrolase. The Journal of Biological Chemistry. 290: 3775-83. PMID 25477519 DOI: 10.1074/Jbc.M114.624718 |
0.557 |
|
| 2013 |
Wallen JR, Majka J, Ellenberger T. Discrete interactions between bacteriophage T7 primase-helicase and DNA polymerase drive the formation of a priming complex containing two copies of DNA polymerase. Biochemistry. 52: 4026-36. PMID 23675753 DOI: 10.1021/Bi400284J |
0.546 |
|
| 2012 |
Della-Maria J, Hegde ML, McNeill DR, Matsumoto Y, Tsai MS, Ellenberger T, Wilson DM, Mitra S, Tomkinson AE. The interaction between polynucleotide kinase phosphatase and the DNA repair protein XRCC1 is critical for repair of DNA alkylation damage and stable association at DNA damage sites. The Journal of Biological Chemistry. 287: 39233-44. PMID 22992732 DOI: 10.1074/Jbc.M112.369975 |
0.575 |
|
| 2012 |
Kim IK, Kiefer JR, Ho CM, Stegeman RA, Classen S, Tainer JA, Ellenberger T. Structure of mammalian poly(ADP-ribose) glycohydrolase reveals a flexible tyrosine clasp as a substrate-binding element. Nature Structural & Molecular Biology. 19: 653-6. PMID 22609859 DOI: 10.1038/Nsmb.2305 |
0.471 |
|
| 2012 |
Ellenberger T. An Arresting Development in Transcription Molecular Cell. 46: 3-4. PMID 22500734 DOI: 10.1016/J.Molcel.2012.03.025 |
0.389 |
|
| 2011 |
Sperry JB, Smith CL, Caparon MG, Ellenberger T, Gross ML. Mapping the protein-protein interface between a toxin and its cognate antitoxin from the bacterial pathogen Streptococcus pyogenes. Biochemistry. 50: 4038-45. PMID 21466233 DOI: 10.1021/Bi200244K |
0.328 |
|
| 2011 |
Smith CL, Ghosh J, Elam JS, Pinkner JS, Hultgren SJ, Caparon MG, Ellenberger T. Structural basis of Streptococcus pyogenes immunity to its NAD+ glycohydrolase toxin. Structure (London, England : 1993). 19: 192-202. PMID 21300288 DOI: 10.1016/J.Str.2010.12.013 |
0.382 |
|
| 2010 |
Cotner-Gohara E, Kim IK, Hammel M, Tainer JA, Tomkinson AE, Ellenberger T. Human DNA ligase III recognizes DNA ends by dynamic switching between two DNA-bound states Biochemistry. 49: 6165-6176. PMID 20518483 DOI: 10.1021/Bi100503W |
0.597 |
|
| 2010 |
Perry JJP, Cotner-Gohara E, Ellenberger T, Tainer JA. Structural dynamics in DNA damage signaling and repair Current Opinion in Structural Biology. 20: 283-294. PMID 20439160 DOI: 10.1016/J.Sbi.2010.03.012 |
0.474 |
|
| 2010 |
Orelli B, McClendon TB, Tsodikov OV, Ellenberger T, Niedernhofer LJ, Schärer OD. The XPA-binding domain of ERCC1 is required for nucleotide excision repair but not other DNA repair pathways. The Journal of Biological Chemistry. 285: 3705-12. PMID 19940136 DOI: 10.1074/Jbc.M109.067538 |
0.518 |
|
| 2010 |
Ghodke H, Wang H, Cotner-Gohara E, Kim I, Ellenberger T, Houten BV. Direct Visualization Of Joining of DNA Fragments By LigIIIβ Using Atomic Force Microscopy Biophysical Journal. 98: 67. DOI: 10.1016/J.Bpj.2009.12.383 |
0.573 |
|
| 2009 |
Antony E, Tomko EJ, Xiao Q, Krejci L, Lohman TM, Ellenberger T. Srs2 disassembles Rad51 filaments by a protein-protein interaction triggering ATP turnover and dissociation of Rad51 from DNA. Molecular Cell. 35: 105-15. PMID 19595720 DOI: 10.1016/J.Molcel.2009.05.026 |
0.564 |
|
| 2009 |
Song W, Pascal JM, Ellenberger T, Tomkinson AE. The DNA binding domain of human DNA ligase I interacts with both nicked DNA and the DNA sliding clamps, PCNA and hRad9-hRad1-hHus1. Dna Repair. 8: 912-9. PMID 19523882 DOI: 10.1016/J.Dnarep.2009.05.002 |
0.6 |
|
| 2009 |
Räschle M, Knipscheer P, Enoiu M, Angelov T, Sun J, Griffith JD, Ellenberger TE, Schärer OD, Walter JC. Mechanism of Replication-Coupled DNA Interstrand Crosslink Repair (DOI:10.1016/j.cell.2008.08.030) Cell. 137: 972. DOI: 10.1016/J.Cell.2009.05.009 |
0.464 |
|
| 2008 |
Räschle M, Knipscheer P, Knipsheer P, Enoiu M, Angelov T, Sun J, Griffith JD, Ellenberger TE, Schärer OD, Walter JC. Mechanism of replication-coupled DNA interstrand crosslink repair. Cell. 134: 969-80. PMID 18805090 DOI: 10.1016/J.Cell.2008.08.030 |
0.534 |
|
| 2008 |
Zhong S, Chen X, Zhu X, Dziegielewska B, Bachman KE, Ellenberger T, Ballin JD, Wilson GM, Tomkinson AE, MacKerell AD. Identification and Validation of Human DNA Ligase Inhibitors Using Computer-Aided Drug Design Journal of Medicinal Chemistry. 51: 4553-4562. PMID 18630893 DOI: 10.1021/Jm8001668 |
0.545 |
|
| 2008 |
Ellenberger T, Tomkinson AE. Eukaryotic DNA ligases: structural and functional insights. Annual Review of Biochemistry. 77: 313-38. PMID 18518823 DOI: 10.1146/Annurev.Biochem.77.061306.123941 |
0.599 |
|
| 2008 |
Chen X, Zhong S, Zhu X, Dziegielewska B, Ellenberger T, Wilson GM, MacKerell AD, Tomkinson AE. Rational design of human DNA ligase inhibitors that target cellular DNA replication and repair Cancer Research. 68: 3169-3177. PMID 18451142 DOI: 10.1158/0008-5472.Can-07-6636 |
0.539 |
|
| 2008 |
Cotner-Gohara E, Kim IK, Tomkinson AE, Ellenberger T. Two DNA-binding and nick recognition modules in human DNA ligase III Journal of Biological Chemistry. 283: 10764-10772. PMID 18238776 DOI: 10.1074/Jbc.M708175200 |
0.584 |
|
| 2007 |
Tsodikov OV, Ivanov D, Orelli B, Staresincic L, Shoshani I, Oberman R, Schärer OD, Wagner G, Ellenberger T. Structural basis for the recruitment of ERCC1-XPF to nucleotide excision repair complexes by XPA. The Embo Journal. 26: 4768-76. PMID 17948053 DOI: 10.1038/Sj.Emboj.7601894 |
0.564 |
|
| 2007 |
Aihara H, Huang WM, Ellenberger T. An Interlocked Dimer of the Protelomerase TelK Distorts DNA Structure for the Formation of Hairpin Telomeres Molecular Cell. 27: 901-913. PMID 17889664 DOI: 10.1016/J.Molcel.2007.07.026 |
0.562 |
|
| 2007 |
Ivanov D, Tsodikov OV, Kasanov J, Ellenberger T, Wagner G, Collins T. Domain-swapped dimerization of the HIV-1 capsid C-terminal domain. Proceedings of the National Academy of Sciences of the United States of America. 104: 4353-8. PMID 17360528 DOI: 10.1073/Pnas.0609477104 |
0.333 |
|
| 2007 |
Wang X, Kennedy RD, Ray K, Stuckert P, Ellenberger T, D'Andrea AD. Chk1-mediated phosphorylation of FANCE is required for the Fanconi anemia/BRCA pathway Molecular and Cellular Biology. 27: 3098-3108. PMID 17296736 DOI: 10.1128/Mcb.02357-06 |
0.474 |
|
| 2007 |
Kowal P, Gurtan AM, Stuckert P, D'Andrea AD, Ellenberger T. Structural determinants of human FANCF protein that function in the assembly of a DNA damage signaling complex Journal of Biological Chemistry. 282: 2047-2055. PMID 17082180 DOI: 10.1074/Jbc.M608356200 |
0.417 |
|
| 2006 |
Pascal JM, Tsodikov OV, Hura GL, Song W, Cotner EA, Classen S, Tomkinson AE, Tainer JA, Ellenberger T. A flexible interface between DNA ligase and PCNA supports conformational switching and efficient ligation of DNA. Molecular Cell. 24: 279-91. PMID 17052461 DOI: 10.1016/J.Molcel.2006.08.015 |
0.586 |
|
| 2006 |
Chen X, Pascal J, Vijayakumar S, Wilson GM, Ellenberger T, Tomkinson AE. Human DNA Ligases I, III, and IV-Purification and New Specific Assays for These Enzymes Methods in Enzymology. 409: 39-52. PMID 16793394 DOI: 10.1016/S0076-6879(05)09003-8 |
0.548 |
|
| 2006 |
King DA, Hall BE, Iwamoto MA, Win KZ, Chang JF, Ellenberger T. Domain structure and protein interactions of the silent information regulator Sir3 revealed by screening a nested deletion library of protein fragments. The Journal of Biological Chemistry. 281: 20107-19. PMID 16717101 DOI: 10.1074/Jbc.M512588200 |
0.406 |
|
| 2006 |
Tomkinson AE, Vijayakumar S, Pascal JM, Ellenberger T. DNA ligases: structure, reaction mechanism, and function. Chemical Reviews. 106: 687-99. PMID 16464020 DOI: 10.1021/Cr040498D |
0.471 |
|
| 2006 |
Radman-Livaja M, Biswas T, Ellenberger T, Landy A, Aihara H. DNA arms do the legwork to ensure the directionality of λ site-specific recombination Current Opinion in Structural Biology. 16: 42-50. PMID 16368232 DOI: 10.1016/J.Sbi.2005.12.003 |
0.559 |
|
| 2006 |
Kim TW, Brieba LG, Ellenberger T, Kool ET. Functional evidence for a small and rigid active site in a high fidelity DNA polymerase: probing T7 DNA polymerase with variably sized base pairs. The Journal of Biological Chemistry. 281: 2289-95. PMID 16311403 DOI: 10.1074/Jbc.M510744200 |
0.472 |
|
| 2005 |
Brieba LG, Kokoska RJ, Bebenek K, Kunkel TA, Ellenberger T. A lysine residue in the fingers subdomain of T7 DNA polymerase modulates the miscoding potential of 8-Oxo-7,8-dihydroguanosine Structure. 13: 1653-1659. PMID 16271888 DOI: 10.1016/J.Str.2005.07.020 |
0.568 |
|
| 2005 |
Cherepanov P, Ambrosio AL, Rahman S, Ellenberger T, Engelman A. Structural basis for the recognition between HIV-1 integrase and transcriptional coactivator p75. Proceedings of the National Academy of Sciences of the United States of America. 102: 17308-13. PMID 16260736 DOI: 10.1073/Pnas.0506924102 |
0.376 |
|
| 2005 |
Chan B, Greenan G, McKeon F, Ellenberger T. Identification of a peptide fragment of DSCR1 that competitively inhibits calcineurin activity in vitro and in vivo. Proceedings of the National Academy of Sciences of the United States of America. 102: 13075-80. PMID 16131541 DOI: 10.1073/Pnas.0503846102 |
0.375 |
|
| 2005 |
Tsodikov OV, Enzlin JH, Schärer OD, Ellenberger T. Crystal structure and DNA binding functions of ERCC1, a subunit of the DNA structure-specific endonuclease XPF-ERCC1. Proceedings of the National Academy of Sciences of the United States of America. 102: 11236-41. PMID 16076955 DOI: 10.1073/Pnas.0504341102 |
0.556 |
|
| 2005 |
Biswas T, Aihara H, Radman-Livaja M, Filman D, Landy A, Ellenberger T. A structural basis for allosteric control of DNA recombination by λ integrase Nature. 435: 1059-1066. PMID 15973401 DOI: 10.1038/Nature03657 |
0.59 |
|
| 2005 |
Iffland A, Kohls D, Low S, Luan J, Zhang Y, Kothe M, Cao Q, Kamath AV, Ding YH, Ellenberger T. Structural determinants for inhibitor specificity and selectivity in PDE2A using the wheat germ in vitro translation system Biochemistry. 44: 8312-8325. PMID 15938621 DOI: 10.1021/Bi047313H |
0.347 |
|
| 2005 |
Rudner AD, Hall BE, Ellenberger T, Moazed D. A nonhistone protein-protein interaction required for assembly of the SIR complex and silent chromatin. Molecular and Cellular Biology. 25: 4514-28. PMID 15899856 DOI: 10.1128/Mcb.25.11.4514-4528.2005 |
0.363 |
|
| 2005 |
Lee SY, Radman-Livaja M, Warren D, Aihara H, Ellenberger T, Landy A. Non-equivalent interactions between amino-terminal domains of neighboring λ integrase protomers direct holliday junction resolution Journal of Molecular Biology. 345: 475-485. PMID 15581892 DOI: 10.1016/J.Jmb.2004.10.068 |
0.459 |
|
| 2004 |
Pascal JM, O'Brien PJ, Tomkinson AE, Ellenberger T. Human DNA ligase I completely encircles and partially unwinds nicked DNA. Nature. 432: 473-8. PMID 15565146 DOI: 10.1038/Nature03082 |
0.597 |
|
| 2004 |
Dutta S, Li Y, Johnson D, Dzantiev L, Richardson CC, Romano LJ, Ellenberger T. Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis. Proceedings of the National Academy of Sciences of the United States of America. 101: 16186-91. PMID 15528277 DOI: 10.1073/Pnas.0406516101 |
0.539 |
|
| 2004 |
Raschle M, Van Komen S, Chi P, Ellenberger T, Sung P. Multiple interactions with the Rad51 recombinase govern the homologous recombination function of Rad54. The Journal of Biological Chemistry. 279: 51973-80. PMID 15465810 DOI: 10.1074/Jbc.M410101200 |
0.54 |
|
| 2004 |
Brieba LG, Eichman BF, Kokoska RJ, Doublié S, Kunkel TA, Ellenberger T. Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase. The Embo Journal. 23: 3452-61. PMID 15297882 DOI: 10.1038/Sj.Emboj.7600354 |
0.545 |
|
| 2004 |
Li Y, Dutta S, Doublié S, Bdour HM, Taylor JS, Ellenberger T. Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7 Nature Structural and Molecular Biology. 11: 784-790. PMID 15235589 DOI: 10.1038/Nsmb792 |
0.581 |
|
| 2004 |
Kato M, Ito T, Wagner G, Ellenberger T. A molecular handoff between bacteriophage T7 DNA primase and T7 DNA polymerase initiates DNA synthesis Journal of Biological Chemistry. 279: 30554-30562. PMID 15133047 DOI: 10.1074/Jbc.M403485200 |
0.56 |
|
| 2004 |
O'Brien PJ, Ellenberger T. The Escherichia coli 3-methyladenine DNA glycosylase AlkA has a remarkably versatile active site. The Journal of Biological Chemistry. 279: 26876-84. PMID 15126496 DOI: 10.1074/Jbc.M403860200 |
0.553 |
|
| 2004 |
Krejci L, Macris M, Li Y, Van Komen S, Villemain J, Ellenberger T, Klein H, Sung P. Role of ATP hydrolysis in the antirecombinase function of Saccharomyces cerevisiae Srs2 protein. The Journal of Biological Chemistry. 279: 23193-9. PMID 15047689 DOI: 10.1074/Jbc.M402586200 |
0.415 |
|
| 2004 |
Lee SY, Aihara H, Ellenberger T, Landy A. Two structural features of λ integrase that are critical DNA cleavege by multimers but not by monomers Proceedings of the National Academy of Sciences of the United States of America. 101: 2770-2775. PMID 14976241 DOI: 10.1073/Pnas.0400135101 |
0.528 |
|
| 2004 |
O'Brien PJ, Ellenberger T. Dissecting the broad substrate specificity of human 3-methyladenine-DNA glycosylase. The Journal of Biological Chemistry. 279: 9750-7. PMID 14688248 DOI: 10.1074/Jbc.M312232200 |
0.379 |
|
| 2004 |
Chang JF, Hall BE, Tanny JC, Moazed D, Filman D, Ellenberger T. Erratum: Structure of the coiled-coil dimerization motif of Sir4 and its interaction with Sir3 (Structure 11 (637-649)) Structure. 12. DOI: 10.1016/J.Str.2004.07.005 |
0.324 |
|
| 2003 |
Toth EA, Li Y, Sawaya MR, Cheng Y, Ellenberger T. The crystal structure of the bifunctional primase-helicase of bacteriophage T7 Molecular Cell. 12: 1113-1123. PMID 14636571 DOI: 10.1016/S1097-2765(03)00442-8 |
0.55 |
|
| 2003 |
O'Brien PJ, Ellenberger T. Human alkyladenine DNA glycosylase uses acid-base catalysis for selective excision of damaged purines. Biochemistry. 42: 12418-29. PMID 14567703 DOI: 10.1021/Bi035177V |
0.398 |
|
| 2003 |
Eichman BF, O'Rourke EJ, Radicella JP, Ellenberger T. Crystal structures of 3-methyladenine DNA glycosylase MagIII and the recognition of alkylated bases. The Embo Journal. 22: 4898-909. PMID 14517230 DOI: 10.1093/Emboj/Cdg505 |
0.584 |
|
| 2003 |
van Oijen AM, Blainey PC, Crampton DJ, Richardson CC, Ellenberger T, Xie XS. Single-molecule kinetics of lambda exonuclease reveal base dependence and dynamic disorder. Science (New York, N.Y.). 301: 1235-8. PMID 12947199 DOI: 10.1126/Science.1084387 |
0.494 |
|
| 2003 |
Aihara H, Kwon HJ, Nunes-Düby SE, Landy A, Ellenberger T. A conformational switch controls the DNA cleavage activity of λ integrase Molecular Cell. 12: 187-198. PMID 12887904 DOI: 10.1016/S1097-2765(03)00268-5 |
0.626 |
|
| 2003 |
Chang JF, Hall BE, Tanny JC, Moazed D, Filman D, Ellenberger T. Structure of the coiled-coil dimerization motif of Sir4 and its interaction with Sir3. Structure (London, England : 1993). 11: 637-49. PMID 12791253 DOI: 10.1016/S0969-2126(03)00093-5 |
0.416 |
|
| 2003 |
Kato M, Ito T, Wagner G, Richardson CC, Ellenberger T. Modular architecture of the bacteriophage T7 primase couples RNA primer synthesis to DNA synthesis. Molecular Cell. 11: 1349-60. PMID 12769857 DOI: 10.1016/S1097-2765(03)00195-3 |
0.575 |
|
| 2003 |
Krejci L, Van Komen S, Li Y, Villemain J, Reddy MS, Klein H, Ellenberger T, Sung P. DNA helicase Srs2 disrupts the Rad51 presynaptic filament Nature. 423: 305-309. PMID 12748644 DOI: 10.1038/Nature01577 |
0.404 |
|
| 2003 |
Radman-Livaja M, Shaw C, Azaro M, Biswas T, Ellenberger T, Landy A. Arm sequences contribute to the architecture and catalytic function of a λ integrase-Holliday junction complex Molecular Cell. 11: 783-794. PMID 12667459 DOI: 10.1016/S1097-2765(03)00111-4 |
0.531 |
|
| 2003 |
Brieba LG, Ellenberger T. Hold tight (but not too tight) to get it right: Accurate bypass of an 8-oxoguanine lesion by DNA polymerase β Structure. 11: 1-2. PMID 12517331 DOI: 10.1016/S0969-2126(02)00917-6 |
0.445 |
|
| 2003 |
Aihara H, Kwon HJ, Nunes-Düby SE, Landy A, Ellenberger T. A conformational switch controls the DNA cleavage activity of lambda integrase. Molecular Cell. 12: 187-198. DOI: 10.2210/Pdb1P7D/Pdb |
0.626 |
|
| 2003 |
Aihara H, Kwon HJ, Nunes-Düby SE, Landy A, Ellenberger T. Erratum: A conformational switch controls the DNA cleavage activity of λ integrase (Molecular Cell (July 2003) 12 (187-198)) Molecular Cell. 12. DOI: 10.1016/S1097-2765(03)00364-2 |
0.478 |
|
| 2002 |
Sarkar D, Azaro MA, Aihara H, Papagiannis CV, Tirumalai R, Nunes-Düby SE, Johnson RC, Ellenberger T, Landy A. Differential affinity and cooperativity functions of the amino-terminal 70 residues of λ integrase Journal of Molecular Biology. 324: 775-789. PMID 12460577 DOI: 10.1016/S0022-2836(02)01199-3 |
0.506 |
|
| 2002 |
Tekle M, Warren DJ, Biswas T, Ellenberger T, Landy A, Nunes-Düby SE. Attenuating functions of the C terminus of λ integrase Journal of Molecular Biology. 324: 649-665. PMID 12460568 DOI: 10.1016/S0022-2836(02)01108-7 |
0.487 |
|
| 2002 |
Rezende LF, Hollis T, Ellenberger T, Richardson CC. Essential amino acid residues in the single-stranded DNA-binding protein of bacteriophage T7. Identification of the dimer interface. The Journal of Biological Chemistry. 277: 50643-53. PMID 12379653 DOI: 10.1074/Jbc.M207359200 |
0.44 |
|
| 2002 |
Goel A, Ellenberger T, Frank-Kamenetskii MD, Herschbach D. Unifying themes in DNA replication: Reconciling single molecule kinetic studies with structural data on DNA polymerases Journal of Biomolecular Structure and Dynamics. 19: 571-584. PMID 11843619 DOI: 10.1080/07391102.2002.10506764 |
0.568 |
|
| 2001 |
Silvian LF, Toth EA, Pham P, Goodman MF, Ellenberger T. Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus Nature Structural Biology. 8: 984-989. PMID 11685247 DOI: 10.1038/Nsb1101-984 |
0.55 |
|
| 2001 |
Ellenberger T, Silvian LF. The anatomy of infidelity Nature Structural Biology. 8: 827-828. PMID 11573081 DOI: 10.1038/Nsb1001-827 |
0.525 |
|
| 2001 |
Hollis T, Lau A, Ellenberger T. Crystallizing thoughts about DNA base excision repair Progress in Nucleic Acid Research and Molecular Biology. 68: 305-314. PMID 11554308 DOI: 10.1016/S0079-6603(01)68109-1 |
0.466 |
|
| 2001 |
Hollis T, Stattel JM, Walther DS, Richardson CC, Ellenberger T. Structure of the gene 2.5 protein, a single-stranded DNA binding protein encoded by bacteriophage T7. Proceedings of the National Academy of Sciences of the United States of America. 98: 9557-62. PMID 11481454 DOI: 10.1073/Pnas.171317698 |
0.541 |
|
| 2001 |
Goel A, Frank-Kamenetskii MD, Ellenberger T, Herschbach D. Tuning DNA "strings": Modulating the rate of DNA replication with mechanical tension Proceedings of the National Academy of Sciences of the United States of America. 98: 8485-8489. PMID 11447284 DOI: 10.1073/Pnas.151261198 |
0.54 |
|
| 2001 |
Kato M, Frick DN, Lee J, Tabor S, Richardson CC, Ellenberger T. A complex of the bacteriophage T7 primase-helicase and DNA polymerase directs primer utilization. The Journal of Biological Chemistry. 276: 21809-20. PMID 11279245 DOI: 10.1074/Jbc.M101470200 |
0.545 |
|
| 2001 |
Abner CW, Lau AY, Ellenberger T, Bloom LB. Base excision and DNA binding activities of human alkyladenine DNA glycosylase are sensitive to the base paired with a lesion. The Journal of Biological Chemistry. 276: 13379-87. PMID 11278716 DOI: 10.1074/Jbc.M010641200 |
0.484 |
|
| 2000 |
Lau AY, Wyatt MD, Glassner BJ, Samson LD, Ellenberger T. Molecular basis for discriminating between normal and damaged bases by the human alkyladenine glycosylase, AAG. Proceedings of the National Academy of Sciences of the United States of America. 97: 13573-8. PMID 11106395 DOI: 10.1073/pnas.97.25.13573 |
0.458 |
|
| 2000 |
Hollis T, Lau A, Ellenberger T. Structural studies of human alkyladenine glycosylase and E. coli 3-methyladenine glycosylase Mutation Research - Dna Repair. 460: 201-210. PMID 10946229 DOI: 10.1016/S0921-8777(00)00027-6 |
0.512 |
|
| 2000 |
Singleton MR, Sawaya MR, Ellenberger T, Wigley DB. Crystal structure of T7 gene 4 ring indicates a mechanism for sequential hydrolysis of nucleotides Cell. 101: 589-600. PMID 10892646 DOI: 10.1016/S0092-8674(00)80871-5 |
0.432 |
|
| 2000 |
Kwon HJ, Bennik MHJ, Demple B, Ellenberger T. Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA Nature Structural Biology. 7: 424-430. PMID 10802742 DOI: 10.1038/75213 |
0.566 |
|
| 2000 |
Hollis T, Ichikawa Y, Ellenberger T. DNA bending and a flip-out mechanism for base excision by the helix-hairpin-helix DNA glycosylase, Escherichia coli AlkA Embo Journal. 19: 758-766. PMID 10675345 DOI: 10.1093/Emboj/19.4.758 |
0.604 |
|
| 1999 |
Sawaya MR, Guo S, Tabor S, Richardson CC, Ellenberger T. Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7 Cell. 99: 167-177. PMID 10535735 DOI: 10.1016/S0092-8674(00)81648-7 |
0.56 |
|
| 1999 |
Wyatt MD, Allan JM, Lau AY, Ellenberger TE, Samson LD. 3-methyladenine DNA glycosylases: structure, function, and biological importance. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 21: 668-76. PMID 10440863 DOI: 10.1002/(SICI)1521-1878(199908)21:8<668::AID-BIES6>3.0.CO;2-D |
0.415 |
|
| 1999 |
Doublié S, Sawaya MR, Ellenberger T. An open and closed case for all polymerases Structure. 7: R31-R35. PMID 10368292 DOI: 10.1016/S0969-2126(99)80017-3 |
0.517 |
|
| 1999 |
Ellenberger T. Unraveling the mysteries of transcription Nature Structural Biology. 6: 497-499. PMID 10360344 DOI: 10.1038/9260 |
0.469 |
|
| 1998 |
Doublié S, Ellenberger T. The mechanism of action of T7 DNA polymerase Current Opinion in Structural Biology. 8: 704-712. PMID 9914251 DOI: 10.1016/S0959-440X(98)80089-4 |
0.572 |
|
| 1998 |
Lau AY, Schärer OD, Samson L, Verdine GL, Ellenberger T. Crystal structure of a human alkylbase-DNA repair enzyme complexed to DNA: mechanisms for nucleotide flipping and base excision. Cell. 95: 249-58. PMID 9790531 DOI: 10.1016/S0092-8674(00)81755-9 |
0.487 |
|
| 1998 |
Tirumalai RS, Kwon HJ, Cardente EH, Ellenberger T, Landy A. Recognition of core-type DNA sites by λ integrase Journal of Molecular Biology. 279: 513-527. PMID 9641975 DOI: 10.1006/Jmbi.1998.1786 |
0.573 |
|
| 1998 |
Wendt H, Thomas RM, Ellenberger T. DNA-mediated folding and assembly of MyoD-E47 heterodimers. The Journal of Biological Chemistry. 273: 5735-43. PMID 9488706 DOI: 10.1074/Jbc.273.10.5735 |
0.589 |
|
| 1998 |
Doublié S, Tabor S, Long AM, Richardson CC, Ellenberger T. Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 Å resolution Nature. 391: 251-258. PMID 9440688 DOI: 10.1038/34593 |
0.536 |
|
| 1998 |
Nunes-Düby SE, Kwon HJ, Tirumalai RS, Ellenberger T, Landy A. Similarities and differences among 105 members of the Int family of site-specific recombinases Nucleic Acids Research. 26: 391-406. PMID 9421491 DOI: 10.1093/Nar/26.2.391 |
0.357 |
|
| 1997 |
Carroll AS, Gilbert DE, Liu X, Cheung JW, Michnowicz JE, Wagner G, Ellenberger TE, Blackwell TK. SKN-1 domain folding and basic region monomer stabilization upon DNA binding. Genes & Development. 11: 2227-38. PMID 9303538 |
0.439 |
|
| 1997 |
Kwon HJ, Tirumalai R, Landy A, Ellenberger T. Flexibility in DNA recombination: Structure of the lambda integrase catalytic core Science. 276: 126-131. PMID 9082984 DOI: 10.1126/Science.276.5309.126 |
0.608 |
|
| 1997 |
Ellenberger T, Landy A. A good turn for DNA: The structure of integration host factor bound to DNA Structure. 5: 153-157. PMID 9032076 DOI: 10.1016/S0969-2126(97)00174-3 |
0.564 |
|
| 1996 |
Labahn J, Schärer OD, Long A, Ezaz-Nikpay K, Verdine GL, Ellenberger TE. Structural basis for the excision repair of alkylation-damaged DNA. Cell. 86: 321-9. PMID 8706136 DOI: 10.1016/S0092-8674(00)80103-8 |
0.569 |
|
| 1995 |
Ellenberger T. Pocketing the difference: structures of uracil excision repair proteins Chemistry and Biology. 2: 351-354. PMID 9383436 DOI: 10.1016/1074-5521(95)90213-9 |
0.575 |
|
| 1995 |
Kim JB, Spotts GD, Halvorsen YD, Shih HM, Ellenberger T, Towle HC, Spiegelman BM. Dual DNA binding specificity of ADD1/SREBP1 controlled by a single amino acid in the basic helix-loop-helix domain Molecular and Cellular Biology. 15: 2582-2588. PMID 7739539 DOI: 10.1128/Mcb.15.5.2582 |
0.434 |
|
| 1994 |
Ellenberger T, Fass D, Arnaud M, Harrison SC. Crystal structure of transcription factor E47: E-box recognition by a basic region helix-loop-helix dimer Genes and Development. 8: 970-980. PMID 7926781 DOI: 10.1101/Gad.8.8.970 |
0.444 |
|
| 1994 |
Ellenberger T. Getting a grip on DNA recognition: structures of the basic region leucine zipper, and the basic region helix-loop-helix DNA-binding domains Current Opinion in Structural Biology. 4: 12-21. DOI: 10.1016/S0959-440X(94)90054-X |
0.584 |
|
| 1993 |
Kim J, Tzamarias D, Ellenberger T, Harrison SC, Struhl K. Adaptability at the protein-DNA interface is an important aspect of sequence recognition by bZIP proteins Proceedings of the National Academy of Sciences of the United States of America. 90: 4513-4517. PMID 8506292 DOI: 10.1073/Pnas.90.10.4513 |
0.485 |
|
| 1992 |
Ellenberger TE, Brandl CJ, Struhl K, Harrison SC. The GCN4 basic region leucine zipper binds DNA as a dimer of uninterrupted alpha helices: crystal structure of the protein-DNA complex. Cell. 71: 1223-37. PMID 1473154 DOI: 10.1016/S0092-8674(05)80070-4 |
0.538 |
|
| 1990 |
Weiss MA, Ellenberger T, Wobbe CR, Lee JP, Harrison SC, Struhl K. Folding transition in the DNA-binding domain of GCN4 on specific binding to DNA Nature. 347: 575-578. PMID 2145515 DOI: 10.1038/347575A0 |
0.479 |
|
| 1987 |
Kappen LS, Ellenberger TE, Goldberg IH. Mechanism and base specificity of DNA Breakage in intact cells by neocarzinostatin. Biochemistry. 26: 384-90. PMID 2950923 DOI: 10.1021/Bi00376A008 |
0.409 |
|
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