| Year |
Citation |
Score |
| 2020 |
Samuels BD, Aho R, Brinkley JF, Bugacov A, Feingold E, Fisher S, Gonzalez-Reiche AS, Hacia JG, Hallgrimsson B, Hansen K, Harris MP, Ho TV, Holmes G, Hooper JE, Jabs EW, et al. FaceBase 3: analytical tools and FAIR resources for craniofacial and dental research. Development (Cambridge, England). 147. PMID 32958507 DOI: 10.1242/Dev.191213 |
0.351 |
|
| 2016 |
Brinkley JF, Fisher S, Harris MP, Holmes G, Hooper JE, Jabs EW, Jones KL, Kesselman C, Klein OD, Maas RL, Marazita ML, Selleri L, Spritz RA, van Bakel H, Visel A, et al. The FaceBase Consortium: A comprehensive resource for craniofacial researchers. Development (Cambridge, England). PMID 27287806 DOI: 10.1242/Dev.135434 |
0.348 |
|
| 2016 |
Detwiler LT, Mejino JL, Brinkley JF. From frames to OWL2: Converting the Foundational Model of Anatomy. Artificial Intelligence in Medicine. 69: 12-21. PMID 27235801 DOI: 10.1016/J.Artmed.2016.04.003 |
0.425 |
|
| 2015 |
Wang KC, Salunkhe AR, Morrison JJ, Lee PP, Mejino JL, Detwiler LT, Brinkley JF, Siegel EL, Rubin DL, Carrino JA. Ontology-based image navigation: exploring 3.0-T MR neurography of the brachial plexus using AIM and RadLex. Radiographics : a Review Publication of the Radiological Society of North America, Inc. 35: 142-51. PMID 25590394 DOI: 10.1148/Rg.351130072 |
0.379 |
|
| 2014 |
Wang KH, Heike CL, Clarkson MD, Mejino JL, Brinkley JF, Tse RW, Birgfeld CB, Fitzsimons DA, Cox TC. Evaluation and integration of disparate classification systems for clefts of the lip. Frontiers in Physiology. 5: 163. PMID 24860508 DOI: 10.3389/Fphys.2014.00163 |
0.594 |
|
| 2014 |
Nichols BN, Mejino JL, Detwiler LT, Nilsen TT, Martone ME, Turner JA, Rubin DL, Brinkley JF. Neuroanatomical domain of the foundational model of anatomy ontology. Journal of Biomedical Semantics. 5: 1. PMID 24398054 DOI: 10.1186/2041-1480-5-1 |
0.783 |
|
| 2013 |
Brinkley JF, Mejino JL, Detwiler LT, Travillian RS, Clarkson M, Cox T, Heike C, Cunningham M, Hochheiser H, Shapiro LG. Towards understanding craniofacial abnormalities: the ontology of craniofacial development and malformation. Amia Joint Summits On Translational Science Proceedings Amia Summit On Translational Science. 2013: 20. PMID 24303230 |
0.618 |
|
| 2013 |
Brinkley JF, Borromeo C, Clarkson M, Cox TC, Cunningham MJ, Detwiler LT, Heike CL, Hochheiser H, Mejino JL, Travillian RS, Shapiro LG. The ontology of craniofacial development and malformation for translational craniofacial research. American Journal of Medical Genetics. Part C, Seminars in Medical Genetics. 163: 232-45. PMID 24124010 DOI: 10.1002/Ajmg.C.31377 |
0.672 |
|
| 2012 |
Puget A, Mejino JLV, Detwiler LT, Franklin JD, Brinkley JF. Spatial-symbolic query engine in anatomy Methods of Information in Medicine. 51: 463-478. PMID 22614739 DOI: 10.3414/Me11-01-0047 |
0.372 |
|
| 2012 |
Brinkley JF, Detwiler LT. A query integrator and manager for the query web. Journal of Biomedical Informatics. 45: 975-91. PMID 22531831 DOI: 10.1016/J.Jbi.2012.03.008 |
0.416 |
|
| 2012 |
Steinert-Threlkeld S, Ardekani S, Mejino JL, Detwiler LT, Brinkley JF, Halle M, Kikinis R, Winslow RL, Miller MI, Ratnanather JT. Ontological labels for automated location of anatomical shape differences. Journal of Biomedical Informatics. 45: 522-7. PMID 22490168 DOI: 10.1016/J.Jbi.2012.02.013 |
0.408 |
|
| 2011 |
Hochheiser H, Aronow BJ, Artinger K, Beaty TH, Brinkley JF, Chai Y, Clouthier D, Cunningham ML, Dixon M, Donahue LR, Fraser SE, Hallgrimsson B, Iwata J, Klein O, Marazita ML, et al. The FaceBase Consortium: a comprehensive program to facilitate craniofacial research. Developmental Biology. 355: 175-82. PMID 21458441 DOI: 10.1016/J.Ydbio.2011.02.033 |
0.347 |
|
| 2011 |
Shaw M, Detwiler LT, Noy N, Brinkley J, Suciu D. vSPARQL: a view definition language for the semantic web. Journal of Biomedical Informatics. 44: 102-17. PMID 20800106 DOI: 10.1016/J.Jbi.2010.08.008 |
0.389 |
|
| 2011 |
Nichols BN, Mejino JLV, Brinkley JF. The foundational model of neuroanatomy ontology: An ontology framework to support neuroanatomical data integration Ceur Workshop Proceedings. 833: 444-445. |
0.751 |
|
| 2010 |
Turner JA, Mejino JL, Brinkley JF, Detwiler LT, Lee HJ, Martone ME, Rubin DL. Application of neuroanatomical ontologies for neuroimaging data annotation. Frontiers in Neuroinformatics. 4. PMID 20725521 DOI: 10.3389/Fninf.2010.00010 |
0.442 |
|
| 2010 |
Corina DP, Loudermilk BC, Detwiler L, Martin RF, Brinkley JF, Ojemann G. Analysis of naming errors during cortical stimulation mapping: implications for models of language representation. Brain and Language. 115: 101-12. PMID 20452661 DOI: 10.1016/J.Bandl.2010.04.001 |
0.366 |
|
| 2009 |
Kalet IJ, Mejino JL, Wang V, Whipple M, Brinkley JF. Content-specific auditing of a large scale anatomy ontology. Journal of Biomedical Informatics. 42: 540-9. PMID 19248842 DOI: 10.1016/J.Jbi.2009.02.006 |
0.372 |
|
| 2009 |
Detwiler LT, Suciu D, Franklin JD, Moore EB, Poliakov AV, Lee ES, Corina DP, Ojemann GA, Brinkley JF. Distributed XQuery-Based Integration and Visualization of Multimodality Brain Mapping Data. Frontiers in Neuroinformatics. 3: 2. PMID 19198662 DOI: 10.3389/Neuro.11.002.2009 |
0.446 |
|
| 2009 |
Rolfe SM, Finney L, Tungaraza RF, Guan J, Shapiro LG, Brinkley JF, Poliakov A, Kleinhans N, Alyward E. An independent component analysis based tool for exploring functional connections in the brain Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7259. DOI: 10.1117/12.811648 |
0.426 |
|
| 2009 |
Tungaraza RF, Guan J, Rolfe S, Atmosukarto I, Poliakov A, Kleinhans NM, Aylward E, Ojemann J, Brinkley JF, Shapiro LG. A similarity retrieval method for functional magnetic resonance imaging (fMRI) statistical maps Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7259. DOI: 10.1117/12.811357 |
0.33 |
|
| 2009 |
Yang S, Atmosukarto I, Franklin J, Brinkley JF, Suciu D, Shapiro LG. A model of multimodal fusion for medical applications Proceedings of Spie - the International Society For Optical Engineering. 7255. DOI: 10.1117/12.805490 |
0.386 |
|
| 2008 |
Shaw M, Detwiler LT, Brinkley JF, Suciu D. Generating application ontologies from reference ontologies. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 672-6. PMID 18999289 |
0.308 |
|
| 2008 |
Yuen J, Li Y, Shapiro LG, Clark JI, Arnett E, Sage EH, Brinkley JF. Automated, computerized, feature-based phenotype analysis of slit lamp images of the mouse lens. Experimental Eye Research. 86: 562-75. PMID 18304532 DOI: 10.1016/J.Exer.2007.11.019 |
0.331 |
|
| 2007 |
Moore EB, Poliakov AV, Lincoln P, Brinkley JF. MindSeer: a portable and extensible tool for visualization of structural and functional neuroimaging data. Bmc Bioinformatics. 8: 389. PMID 17937818 DOI: 10.1186/1471-2105-8-389 |
0.395 |
|
| 2007 |
Poliakov AV, Hertzenberg X, Moore EB, Corina DP, Ojemann GA, Brinkley JF. Unobtrusive integration of data management with fMRI analysis. Neuroinformatics. 5: 3-10. PMID 17426350 DOI: 10.1385/Ni:5:1:3 |
0.378 |
|
| 2006 |
Warren W, Agoncillo A, Franklin J, Brinkley J. Intelligent web-based whole body visualization for anatomy education. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1136. PMID 17238755 |
0.574 |
|
| 2005 |
Warren W, Brinkley JF. Knowledge-based, interactive, custom anatomical scene creation for medical education: the Biolucida system. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 789-93. PMID 16779148 |
0.605 |
|
| 2005 |
Wang K, Tarczy-Hornoch P, Shaker R, Mork P, Brinkley JF. BioMediator data integration: beyond genomics to neuroscience data Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 779-783. PMID 16779146 |
0.306 |
|
| 2005 |
Corina DP, Gibson EK, Martin R, Poliakov A, Brinkley J, Ojemann GA. Dissociation of action and object naming: evidence from cortical stimulation mapping. Human Brain Mapping. 24: 1-10. PMID 15593268 DOI: 10.1002/Hbm.20063 |
0.366 |
|
| 2005 |
Poliakov AV, Albright E, Hinshaw KP, Corina DP, Ojemann G, Martin RF, Brinkley JF. Server-based approach to web visualization of integrated three-dimensional brain imaging data. Journal of the American Medical Informatics Association : Jamia. 12: 140-51. PMID 15561787 DOI: 10.1197/Jamia.M1671 |
0.778 |
|
| 2005 |
Shapiro LG, Chung E, Detwiler LT, Mejino JL, Agoncillo AV, Brinkley JF, Rosse C. Processes and problems in the formative evaluation of an interface to the Foundational Model of Anatomy knowledge base. Journal of the American Medical Informatics Association : Jamia. 12: 35-46. PMID 15492037 DOI: 10.1197/Jamia.M1401 |
0.375 |
|
| 2003 |
Mork P, Brinkley JF, Rosse C. OQAFMA Querying agent for the Foundational Model of Anatomy: a prototype for providing flexible and efficient access to large semantic networks. Journal of Biomedical Informatics. 36: 501-17. PMID 14759821 DOI: 10.1016/J.Jbi.2003.11.004 |
0.381 |
|
| 2003 |
Tang Z, Kadiyska Y, Li H, Suciu D, Brinkley JF. Dynamic XML-based exchange of relational data: application to the Human Brain Project. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 649-53. PMID 14728252 |
0.338 |
|
| 2003 |
Kim S, Brinkley JF, Rosse C. Profile of on-line anatomy information resources: Design and instructional implications Clinical Anatomy. 16: 55-71. PMID 12486740 DOI: 10.1002/Ca.10088 |
0.321 |
|
| 2002 |
Brinkley JF, Rosse C. Imaging and the Human Brain Project: A review Methods of Information in Medicine. 41: 245-260. PMID 12425235 DOI: 10.1055/S-0038-1634485 |
0.398 |
|
| 2002 |
Jakobovits RM, Rosse C, Brinkley JF. WIRM: an open source toolkit for building biomedical web applications. Journal of the American Medical Informatics Association : Jamia. 9: 557-70. PMID 12386108 DOI: 10.1197/Jamia.M1138 |
0.409 |
|
| 2002 |
Hinshaw KP, Poliakov AV, Moore EB, Martin RF, Shapiro LG, Brinkley JF. Shape-based cortical surface segmentation for visualization brain mapping. Neuroimage. 16: 295-316. PMID 12030818 DOI: 10.1006/Nimg.2002.1093 |
0.784 |
|
| 2002 |
Brinkley JF, Rosse C. Imaging Informatics and the Human Brain Project: the Role of Structure. Yearb Med Inform. 11: 131-148. DOI: 10.1055/S-0038-1638122 |
0.339 |
|
| 2001 |
Poliakov AV, Albright E, Corina D, Ojemann G, Martin RF, Brinkley JF. Server-based approach to web visualization of integrated 3-D medical image data. Proceedings / Amia ... Annual Symposium. Amia Symposium. 533-7. PMID 11825248 |
0.321 |
|
| 2000 |
Poliakov AV, Jakobovits RM, Martin RF, Corina DP, Brinkley JF. Software tools for visualization and analysis of human brain data for language mapping Neuroimage. 11: S907. DOI: 10.1016/S1053-8119(00)91835-4 |
0.441 |
|
| 2000 |
Martin RF, Poliakov AV, Mulligan KA, Corina DP, Ojemann GA, Brinkley JF. Multi-patient mapping of language sites on 3-D brain models Neuroimage. 11: S534. DOI: 10.1016/S1053-8119(00)91465-4 |
0.397 |
|
| 2000 |
Corina DP, Poliakov A, Keith S, Martin R, Mulligan K, Maravilla K, Brinkley JF, Ojemann GA. Correspondences between language cortex identified by cortical stimulation mapping and fMRI Neuroimage. 11: S295. DOI: 10.1016/S1053-8119(00)91227-8 |
0.348 |
|
| 1999 |
Poliakov AV, Hinshaw KP, Rosse C, Brinkley JF. Integration and visualization of multimodality brain data for language mapping. Proceedings / Amia ... Annual Symposium. Amia Symposium. 349-53. PMID 10566379 |
0.791 |
|
| 1999 |
Corina DP, McBurney SL, Dodrill C, Hinshaw K, Brinkley J, Ojemann G. Functional roles of Broca's area and SMG: evidence from cortical stimulation mapping in a deaf signer. Neuroimage. 10: 570-81. PMID 10547334 DOI: 10.1006/Nimg.1999.0499 |
0.75 |
|
| 1999 |
Brinkley JF, Wong BA, Hinshaw KP, Rosse C. Design of an anatomy information system Ieee Computer Graphics and Applications. 19: 38-48. DOI: 10.1109/38.761548 |
0.742 |
|
| 1998 |
Hinshaw KP, Brinkley JF. Incorporating constraint-based shape models into an interactive system for functional brain mapping. Proceedings / Amia ... Annual Symposium. Amia Symposium. 921-5. PMID 9929353 |
0.781 |
|
| 1998 |
Rosse C, Mejino JL, Modayur BR, Jakobovits R, Hinshaw KP, Brinkley JF. Motivation and organizational principles for anatomical knowledge representation: the digital anatomist symbolic knowledge base. Journal of the American Medical Informatics Association : Jamia. 5: 17-40. PMID 9452983 DOI: 10.1136/Jamia.1998.0050017 |
0.764 |
|
| 1997 |
Brinkley JF, Bradley SW, Sundsten JW, Rosse C. The digital anatomist information system and its use in the generation and delivery of web-based anatomy atlases Computers and Biomedical Research. 30: 472-503. PMID 9466836 DOI: 10.1006/Cbmr.1997.1461 |
0.417 |
|
| 1997 |
Modayur B, Prothero J, Ojemann G, Maravilla K, Brinkley J. Visualization-based mapping of language function in the brain Neuroimage. 6: 245-258. PMID 9417968 DOI: 10.1006/Nimg.1997.0301 |
0.486 |
|
| 1997 |
Hinshaw KP, Brinkley JF. Using 3-D shape models to guide segmentation of MR brain images. Proceedings : a Conference of the American Medical Informatics Association / ... Amia Annual Fall Symposium. Amia Fall Symposium. 469-73. PMID 9357670 |
0.77 |
|
| 1997 |
Brinkley JF, Rosse C. The Digital Anatomist Distributed Framework and Its Applications to Knowledge-based Medical Imaging Journal of the American Medical Informatics Association. 4: 165-183. PMID 9147337 DOI: 10.1136/Jamia.1997.0040165 |
0.471 |
|
| 1997 |
Hinshaw KP, Brinkley JF. Shape-based interactive three-dimensional medical image segmentation Proceedings of Spie - the International Society For Optical Engineering. 3034: 236-242. DOI: 10.1117/12.274113 |
0.771 |
|
| 1996 |
Jakobovits RM, Modayur B, Brinkley JF. A Web-based repository manager for brain mapping data Proceedings : a Conference of the American Medical Informatics Association / ... Amia Annual Fall Symposium. Amia Fall Symposium. 309-313. PMID 8947678 |
0.32 |
|
| 1996 |
Modayur BR, Prothero J, Rosse C, Jakobovits R, Brinkley JF. Visualization and mapping of neurosurgical functional brain data onto a 3-D MR-based model of the brain surface Proceedings : a Conference of the American Medical Informatics Association / ... Amia Annual Fall Symposium. Amia Fall Symposium. 304-308. PMID 8947677 |
0.416 |
|
| 1996 |
Jakobovits RM, Lewis LM, Ahrens JP, Shapiro LG, Tanimoto SL, Brinkley JF. A visual database environment for scientific research Journal of Visual Languages and Computing. 7: 361-375. DOI: 10.1006/Jvlc.1996.0019 |
0.398 |
|
| 1993 |
Brinkley JF. A Flexible, Generic Model for Anatomic Shape: Application to Interactive Two-Dimensional Medical image Segmentation and Matching Computers and Biomedical Research. 26: 121-142. PMID 8477585 DOI: 10.1006/Cbmr.1993.1008 |
0.389 |
|
| 1993 |
Brinkley JF, Eno K, Sundsten JW. Knowledge-based client-server approach to structural information retrieval: the digital anatomist browser Computer Methods and Programs in Biomedicine. 40: 131-145. PMID 8370279 DOI: 10.1016/0169-2607(93)90007-8 |
0.403 |
|
| 1985 |
Brinkley JF. Knowledge-Driven Ultrasonic Three-Dimensional Organ Modeling Ieee Transactions On Pattern Analysis and Machine Intelligence. 7: 431-441. PMID 21869281 DOI: 10.1109/Tpami.1985.4767682 |
0.41 |
|
| 1984 |
Brinkley JF. Learned shape knowledge in ultrasonic three-dimensional organ modeling Journal of Medical Systems. 8: 214-215. DOI: 10.1007/Bf02224508 |
0.303 |
|
| 1978 |
Brinkley JF, Moritz WE, Baker DW. Ultrasonic three-dimensional imaging and volume from a series of arbitrary sector scans Ultrasound in Medicine and Biology. 4: 317-321. PMID 753006 DOI: 10.1016/0301-5629(78)90020-0 |
0.327 |
|
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