Olaf R.P. Bininda-Emonds - Publications

Affiliations: 
Carl von Ossietzky Universität Oldenburg, Oldenburg, Niedersachsen, Germany 
Area:
phylogenetic methodology, systematics, evolutionary biology

53 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Wilke T, Ahlrichs WH, Bininda-Emonds OR. Is the valid species Synchaeta monopus Plate, 1889 (Rotifera: Monogononta) a product of preparation artefacts? Journal of Natural History. 53: 413-423. DOI: 10.1080/00222933.2019.1593536  0.364
2018 Wilke T, Ahlrichs WH, Bininda-Emonds OR. On the importance of robust species descriptions for Rotifera: re-descriptions of Synchaeta stylata and Synchaeta longipes and a comparison to Synchaeta jollyae Zoologischer Anzeiger. 277: 42-54. DOI: 10.1016/J.Jcz.2018.07.002  0.484
2017 WILKE T, AHLRICHS WH, BININDA-EMONDS OR. A comprehensive and integrative re-description of Synchaeta tremula (Müller, 1786) and the newly rediscovered Synchaeta tremuloida Pourriot, 1965 (Rotifera: Synchaetidae) Zootaxa. 4276: 503. DOI: 10.11646/Zootaxa.4276.4.3  0.464
2014 Huang S, Bininda-Emonds OR, Stephens PR, Gittleman JL, Altizer S. Phylogenetically related and ecologically similar carnivores harbour similar parasite assemblages. The Journal of Animal Ecology. 83: 671-80. PMID 24289314 DOI: 10.1111/1365-2656.12160  0.602
2014 Hartmann AM, Tesch D, Nothwang HG, Bininda-Emonds OR. Evolution of the cation chloride cotransporter family: ancient origins, gene losses, and subfunctionalization through duplication. Molecular Biology and Evolution. 31: 434-47. PMID 24273324 DOI: 10.1093/Molbev/Mst225  0.339
2014 Bininda-Emonds O. An introduction to supertree construction (and partitioned phylogenetic analyses) with a view toward the distinction between gene trees and species trees Modern Phylogenetic Comparative Methods and Their Application in Evolutionary Biology. 19-48. DOI: 10.1007/978-3-662-43550-2_3  0.342
2013 Berry V, Bininda-Emonds OR, Semple C. Amalgamating source trees with different taxonomic levels. Systematic Biology. 62: 231-49. PMID 23179602 DOI: 10.1093/Sysbio/Sys090  0.384
2012 König E, Zhou M, Wang L, Chen T, Bininda-Emonds OR, Shaw C. Antimicrobial peptides and alytesin are co-secreted from the venom of the Midwife toad, Alytes maurus (Alytidae, Anura): implications for the evolution of frog skin defensive secretions. Toxicon : Official Journal of the International Society On Toxinology. 60: 967-81. PMID 22800568 DOI: 10.1016/J.Toxicon.2012.06.015  0.319
2012 Bininda-Emonds OR, Purvis A. Comment on "Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification". Science (New York, N.Y.). 337: 34; author reply 34. PMID 22767912 DOI: 10.1126/Science.1220012  0.567
2012 Nyakatura K, Bininda-Emonds OR. Updating the evolutionary history of Carnivora (Mammalia): a new species-level supertree complete with divergence time estimates. Bmc Biology. 10: 12. PMID 22369503 DOI: 10.1186/1741-7007-10-12  0.518
2011 Bininda-Emonds OR. Inferring the Tree of Life: chopping a phylogenomic problem down to size? Bmc Biology. 9: 59. PMID 21933452 DOI: 10.1186/1741-7007-9-59  0.405
2011 Rodrigues AS, Grenyer R, Baillie JE, Bininda-Emonds OR, Gittlemann JL, Hoffmann M, Safi K, Schipper J, Stuart SN, Brooks T. Complete, accurate, mammalian phylogenies aid conservation planning, but not much. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 366: 2652-60. PMID 21844044 DOI: 10.1098/Rstb.2011.0104  0.437
2011 Gottschling M, Göker M, Stamatakis A, Bininda-Emonds OR, Nindl I, Bravo IG. Quantifying the phylodynamic forces driving papillomavirus evolution. Molecular Biology and Evolution. 28: 2101-13. PMID 21285031 DOI: 10.1093/Molbev/Msr030  0.311
2011 König E, Bininda-Emonds OR. Evidence for convergent evolution in the antimicrobial peptide system in anuran amphibians. Peptides. 32: 20-5. PMID 20955747 DOI: 10.1016/J.Peptides.2010.10.009  0.337
2010 Goremykin VV, Nikiforova SV, Bininda-Emonds OR. Automated removal of noisy data in phylogenomic analyses. Journal of Molecular Evolution. 71: 319-31. PMID 20976444 DOI: 10.1007/S00239-010-9398-Z  0.309
2010 Pattengale ND, Alipour M, Bininda-Emonds OR, Moret BM, Stamatakis A. How many bootstrap replicates are necessary? Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 17: 337-54. PMID 20377449 DOI: 10.1089/Cmb.2009.0179  0.356
2009 Fritz SA, Bininda-Emonds OR, Purvis A. Geographical variation in predictors of mammalian extinction risk: big is bad, but only in the tropics. Ecology Letters. 12: 538-49. PMID 19392714 DOI: 10.1111/J.1461-0248.2009.01307.X  0.592
2009 Krumbholz A, Bininda-Emonds OR, Wutzler P, Zell R. Phylogenetics, evolution, and medical importance of polyomaviruses. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 9: 784-99. PMID 19379840 DOI: 10.1016/J.Meegid.2009.04.008  0.394
2008 Davies TJ, Fritz SA, Grenyer R, Orme CD, Bielby J, Bininda-Emonds OR, Cardillo M, Jones KE, Gittleman JL, Mace GM, Purvis A. Colloquium paper: phylogenetic trees and the future of mammalian biodiversity. Proceedings of the National Academy of Sciences of the United States of America. 105: 11556-63. PMID 18695230 DOI: 10.1073/Pnas.0801917105  0.756
2008 Krumbholz A, Bininda-Emonds OR, Wutzler P, Zell R. Evolution of four BK virus subtypes. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 8: 632-43. PMID 18582602 DOI: 10.1016/J.Meegid.2008.05.006  0.345
2008 Welch JJ, Bininda-Emonds OR, Bromham L. Correlates of substitution rate variation in mammalian protein-coding sequences. Bmc Evolutionary Biology. 8: 53. PMID 18284663 DOI: 10.1186/1471-2148-8-53  0.388
2007 Bininda-Emonds OR. Fast genes and slow clades: comparative rates of molecular evolution in mammals. Evolutionary Bioinformatics Online. 3: 59-85. PMID 19461986 DOI: 10.4137/Ebo.S0  0.374
2007 Higdon JW, Bininda-Emonds OR, Beck RM, Ferguson SH. Phylogeny and divergence of the pinnipeds (Carnivora: Mammalia) assessed using a multigene dataset. Bmc Evolutionary Biology. 7: 216. PMID 17996107 DOI: 10.1186/1471-2148-7-216  0.5
2007 Bininda-Emonds OR, Jeffery JE, Sánchez-Villagra MR, Hanken J, Colbert M, Pieau C, Selwood L, Ten Cate C, Raynaud A, Osabutey CK, Richardson MK. Forelimb-hindlimb developmental timing changes across tetrapod phylogeny. Bmc Evolutionary Biology. 7: 182. PMID 17908305 DOI: 10.1186/1471-2148-7-182  0.456
2007 Fritz U, Bininda-Emonds OR. When genes meet nomenclature: tortoise phylogeny and the shifting generic concepts of Testudo and Geochelone. Zoology (Jena, Germany). 110: 298-307. PMID 17611092 DOI: 10.1016/J.Zool.2007.02.003  0.45
2007 Bielby J, Mace GM, Bininda-Emonds OR, Cardillo M, Gittleman JL, Jones KE, Orme CD, Purvis A. The fast-slow continuum in mammalian life history: an empirical reevaluation. The American Naturalist. 169: 748-57. PMID 17479461 DOI: 10.1086/516847  0.707
2007 Bininda-Emonds OR, Cardillo M, Jones KE, MacPhee RD, Beck RM, Grenyer R, Price SA, Vos RA, Gittleman JL, Purvis A. The delayed rise of present-day mammals. Nature. 446: 507-12. PMID 17392779 DOI: 10.1038/Nature05634  0.699
2007 Smirthwaite JJ, Rundle SD, Bininda-Emonds OR, Spicer JI. An integrative approach identifies developmental sequence heterochronies in freshwater basommatophoran snails. Evolution & Development. 9: 122-30. PMID 17371395 DOI: 10.1111/J.1525-142X.2007.00143.X  0.398
2006 Beck RM, Bininda-Emonds OR, Cardillo M, Liu FG, Purvis A. A higher-level MRP supertree of placental mammals. Bmc Evolutionary Biology. 6: 93. PMID 17101039 DOI: 10.1186/1471-2148-6-93  0.59
2005 Jones KE, Bininda-Emonds OR, Gittleman JL. Bats, clocks, and rocks: diversification patterns in Chiroptera. Evolution; International Journal of Organic Evolution. 59: 2243-55. PMID 16405167 DOI: 10.1111/J.0014-3820.2005.Tb00932.X  0.645
2005 Bininda-Emonds OR, Beck RM, Purvis A. Getting to the roots of matrix representation. Systematic Biology. 54: 668-72. PMID 16126661 DOI: 10.1080/10635150590947113  0.477
2005 Price SA, Bininda-Emonds OR, Gittleman JL. A complete phylogeny of the whales, dolphins and even-toed hoofed mammals (Cetartiodactyla). Biological Reviews of the Cambridge Philosophical Society. 80: 445-73. PMID 16094808 DOI: 10.1017/S1464793105006743  0.694
2005 Cardillo M, Mace GM, Jones KE, Bielby J, Bininda-Emonds OR, Sechrest W, Orme CD, Purvis A. Multiple causes of high extinction risk in large mammal species. Science (New York, N.Y.). 309: 1239-41. PMID 16037416 DOI: 10.1126/Science.1116030  0.679
2005 Jeffery JE, Bininda-Emonds OR, Coates MI, Richardson MK. A new technique for identifying sequence heterochrony. Systematic Biology. 54: 230-40. PMID 16012094 DOI: 10.1080/10635150590923227  0.364
2005 Bininda-Emonds OR. Supertree construction in the genomic age. Methods in Enzymology. 395: 745-57. PMID 15865993 DOI: 10.1016/S0076-6879(05)95038-6  0.452
2004 Bininda-Emonds OR. The evolution of supertrees. Trends in Ecology & Evolution. 19: 315-22. PMID 16701277 DOI: 10.1016/J.Tree.2004.03.015  0.378
2004 Agapow PM, Bininda-Emonds OR, Crandall KA, Gittleman JL, Mace GM, Marshall JC, Purvis A. The impact of species concept on biodiversity studies. The Quarterly Review of Biology. 79: 161-79. PMID 15232950 DOI: 10.1086/383542  0.744
2004 Bininda-Emonds OR. Trees versus characters and the supertree/supermatrix "paradox". Systematic Biology. 53: 356-9. PMID 15205059 DOI: 10.1080/10635150490440396  0.353
2003 Bininda-Emonds OR. Novel versus unsupported clades: assessing the qualitative support for clades in MRP supertrees. Systematic Biology. 52: 839-48. PMID 14668120 DOI: 10.1093/Sysbio/52.6.839  0.38
2003 Bininda-Emonds OR, Jones KE, Price SA, Grenyer R, Cardillo M, Habib M, Purvis A, Gittleman JL. Supertrees are a necessary not-so-evil: a comment on Gatesy et al. Systematic Biology. 52: 724-9. PMID 14530139 DOI: 10.1080/10635150390235647  0.6
2003 Bininda-Emonds OR, Jeffery JE, Richardson MK. Inverting the hourglass: quantitative evidence against the phylotypic stage in vertebrate development. Proceedings. Biological Sciences / the Royal Society. 270: 341-6. PMID 12639312 DOI: 10.1098/Rspb.2002.2242  0.343
2002 Jeffery JE, Bininda-Emonds OR, Coates MI, Richardson MK. Analyzing evolutionary patterns in amniote embryonic development. Evolution & Development. 4: 292-302. PMID 12168621 DOI: 10.1046/J.1525-142X.2002.02018.X  0.43
2002 Jeffery JE, Richardson MK, Coates MI, Bininda-Emonds OR. Analyzing developmental sequences within a phylogenetic framework. Systematic Biology. 51: 478-91. PMID 12079645 DOI: 10.1080/10635150290069904  0.342
2002 Jones KE, Purvis A, MacLarnon A, Bininda-Emonds OR, Simmons NB. A phylogenetic supertree of the bats (Mammalia: Chiroptera). Biological Reviews of the Cambridge Philosophical Society. 77: 223-59. PMID 12056748 DOI: 10.1017/S1464793101005899  0.633
2002 Shapiro B, Sibthorpe D, Rambaut A, Austin J, Wragg GM, Bininda-Emonds OR, Lee PL, Cooper A. Flight of the dodo. Science (New York, N.Y.). 295: 1683. PMID 11872833 DOI: 10.1126/Science.295.5560.1683  0.581
2001 Richardson MK, Jeffery JE, Coates MI, Bininda-Emonds OR. Comparative methods in developmental biology. Zoology (Jena, Germany). 104: 278-83. PMID 16351842 DOI: 10.1078/0944-2006-00033  0.459
2001 Bininda-Emonds OR, Sanderson MJ. Assessment of the accuracy of matrix representation with parsimony analysis supertree construction. Systematic Biology. 50: 565-79. PMID 12116654 DOI: 10.1080/10635150120358  0.561
2001 Bininda-Emonds OR, Brady SG, Kim J, Sanderson MJ. Scaling of accuracy in extremely large phylogenetic trees. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 547-58. PMID 11262972 DOI: 10.1142/9789814447362_0053  0.507
2001 Bininda-Emonds O. Making sense of mammals Trends in Ecology and Evolution. 16: 427. DOI: 10.1016/S0169-5347(01)02202-9  0.398
2000 Bininda-Emonds OR, Gittleman JL. Are pinnipeds functionally different from fissiped carnivores? The importance of phylogenetic comparative analyses. Evolution; International Journal of Organic Evolution. 54: 1011-23. PMID 10937273 DOI: 10.1111/J.0014-3820.2000.Tb00100.X  0.666
2000 Bininda-Emonds OR. Factors influencing phylogenetic inference: a case study using the mammalian carnivores. Molecular Phylogenetics and Evolution. 16: 113-26. PMID 10877944 DOI: 10.1006/Mpev.2000.0772  0.399
2000 Crandall KA, Bininda-Emonds OR, Mace GM, Wayne RK. Considering evolutionary processes in conservation biology. Trends in Ecology & Evolution. 15: 290-295. PMID 10856956 DOI: 10.1016/S0169-5347(00)01876-0  0.526
1999 Bininda-Emonds OR, Gittleman JL, Purvis A. Building large trees by combining phylogenetic information: a complete phylogeny of the extant Carnivora (Mammalia). Biological Reviews of the Cambridge Philosophical Society. 74: 143-75. PMID 10396181 DOI: 10.1111/J.1469-185X.1999.Tb00184.X  0.713
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