| Year |
Citation |
Score |
| 2024 |
Katsuda T, Sussman JH, Ito K, Katznelson A, Yuan S, Takenaka N, Li J, Merrell AJ, Cure H, Li Q, Rasool RU, Asangani IA, Zaret KS, Stanger BZ. Cellular reprogramming in vivo initiated by SOX4 pioneer factor activity. Nature Communications. 15: 1761. PMID 38409161 DOI: 10.1038/s41467-024-45939-z |
0.435 |
|
| 2023 |
Barral A, Zaret KS. Pioneer factors: roles and their regulation in development. Trends in Genetics : Tig. PMID 37940484 DOI: 10.1016/j.tig.2023.10.007 |
0.431 |
|
| 2023 |
Pownall ME, Miao L, Vejnar CE, M'Saad O, Sherrard A, Frederick MA, Benitez MDJ, Boswell CW, Zaret KS, Bewersdorf J, Giraldez AJ. Chromatin expansion microscopy reveals nanoscale organization of transcription and chromatin. Science (New York, N.Y.). 381: 92-100. PMID 37410825 DOI: 10.1126/science.ade5308 |
0.326 |
|
| 2023 |
Lerner J, Katznelson A, Zhang J, Zaret KS. Different chromatin-scanning modes lead to targeting of compacted chromatin by pioneer factors FOXA1 and SOX2. Cell Reports. 42: 112748. PMID 37405916 DOI: 10.1016/j.celrep.2023.112748 |
0.356 |
|
| 2023 |
McCarthy RL, Zhang J, Zaret KS. Diverse heterochromatin states restricting cell identity and reprogramming. Trends in Biochemical Sciences. PMID 36990958 DOI: 10.1016/j.tibs.2023.02.007 |
0.397 |
|
| 2023 |
Katsuda T, Sussman J, Ito K, Katznelson A, Yuan S, Li J, Merrell AJ, Takenaka N, Cure H, Li Q, Rasool RU, Asangani IA, Zaret KS, Stanger BZ. Physiological reprogramming mediated by Sox4 pioneer factor activity. Biorxiv : the Preprint Server For Biology. PMID 36824858 DOI: 10.1101/2023.02.14.528556 |
0.423 |
|
| 2022 |
Frederick MA, Williamson KE, Fernandez Garcia M, Ferretti MB, McCarthy RL, Donahue G, Luzete Monteiro E, Takenaka N, Reynaga J, Kadoch C, Zaret KS. A pioneer factor locally opens compacted chromatin to enable targeted ATP-dependent nucleosome remodeling. Nature Structural & Molecular Biology. PMID 36536103 DOI: 10.1038/s41594-022-00886-5 |
0.753 |
|
| 2022 |
Luzete-Monteiro E, Zaret KS. Structures and consequences of pioneer factor binding to nucleosomes. Current Opinion in Structural Biology. 75: 102425. PMID 35863165 DOI: 10.1016/j.sbi.2022.102425 |
0.425 |
|
| 2022 |
Gong W, Das S, Sierra-Pagan JE, Skie E, Dsouza N, Larson TA, Garry MG, Luzete-Monteiro E, Zaret KS, Garry DJ. ETV2 functions as a pioneer factor to regulate and reprogram the endothelial lineage. Nature Cell Biology. 24: 672-684. PMID 35550615 DOI: 10.1038/s41556-022-00901-3 |
0.332 |
|
| 2022 |
Ito K, Zaret KS. Maintaining Transcriptional Specificity Through Mitosis. Annual Review of Genomics and Human Genetics. PMID 35440147 DOI: 10.1146/annurev-genom-121321-094603 |
0.392 |
|
| 2021 |
Reizel Y, Morgan A, Gao L, Schug J, Mukherjee S, García MF, Donahue G, Baur JA, Zaret KS, Kaestner KH. FoxA-dependent demethylation of DNA initiates epigenetic memory of cellular identity. Developmental Cell. PMID 33636105 DOI: 10.1016/j.devcel.2021.02.005 |
0.372 |
|
| 2020 |
Zaret KS. Pioneer Transcription Factors Initiating Gene Network Changes. Annual Review of Genetics. PMID 32886547 DOI: 10.1146/Annurev-Genet-030220-015007 |
0.493 |
|
| 2020 |
Donovan PJ, Zaret KS. John D. Gearhart (1943-2020). Science (New York, N.Y.). 369: 628. PMID 32764057 DOI: 10.1126/Science.Abd6915 |
0.318 |
|
| 2020 |
Lerner J, Gomez-Garcia PA, McCarthy RL, Liu Z, Lakadamyali M, Zaret KS. Two-Parameter Mobility Assessments Discriminate Diverse Regulatory Factor Behaviors in Chromatin. Molecular Cell. PMID 32574554 DOI: 10.1016/J.Molcel.2020.05.036 |
0.431 |
|
| 2020 |
Iwafuchi M, Cuesta I, Donahue G, Takenaka N, Osipovich AB, Magnuson MA, Roder H, Seeholzer SH, Santisteban P, Zaret KS. Gene network transitions in embryos depend upon interactions between a pioneer transcription factor and core histones. Nature Genetics. PMID 32203463 DOI: 10.1038/S41588-020-0591-8 |
0.473 |
|
| 2019 |
Fernandez Garcia M, Moore CD, Schulz KN, Alberto O, Donague G, Harrison MM, Zhu H, Zaret KS. Structural Features of Transcription Factors Associating with Nucleosome Binding. Molecular Cell. PMID 31303471 DOI: 10.1016/J.Molcel.2019.06.009 |
0.756 |
|
| 2019 |
Nicetto D, Zaret KS. Role of H3K9me3 heterochromatin in cell identity establishment and maintenance. Current Opinion in Genetics & Development. 55: 1-10. PMID 31103921 DOI: 10.1016/J.Gde.2019.04.013 |
0.422 |
|
| 2019 |
McDaniel SL, Gibson TJ, Schulz KN, Fernandez Garcia M, Nevil M, Jain SU, Lewis PW, Zaret KS, Harrison MM. Continued Activity of the Pioneer Factor Zelda Is Required to Drive Zygotic Genome Activation. Molecular Cell. PMID 30797686 DOI: 10.1016/J.Molcel.2019.01.014 |
0.733 |
|
| 2019 |
Grindheim JM, Nicetto D, Donahue G, Zaret KS. PRC2 proteins EZH1 and EZH2 Regulate Timing of Postnatal Hepatocyte Maturation and Fibrosis by Repressing Gene Expression at Promoter Regions in Euchromatin in Mice. Gastroenterology. PMID 30689973 DOI: 10.1053/J.Gastro.2019.01.041 |
0.423 |
|
| 2019 |
Nicetto D, Donahue G, Jain T, Peng T, Sidoli S, Sheng L, Montavon T, Becker JS, Grindheim JM, Blahnik K, Garcia BA, Tan K, Bonasio R, Jenuwein T, Zaret KS. H3K9me3-heterochromatin loss at protein-coding genes enables developmental lineage specification. Science (New York, N.Y.). PMID 30606806 DOI: 10.1126/Science.Aau0583 |
0.409 |
|
| 2019 |
Kim J, Zaret KS. Generation of Induced Pluripotent Stem Cell-Like Lines from Human Pancreatic Ductal Adenocarcinoma. Methods in Molecular Biology (Clifton, N.J.). 1882: 33-53. PMID 30378042 DOI: 10.1007/978-1-4939-8879-2_4 |
0.323 |
|
| 2019 |
King H, Zaret K. Decision letter: Dynamic regulation of chromatin accessibility by pluripotency transcription factors across the cell cycle Elife. DOI: 10.7554/Elife.50087.Sa1 |
0.409 |
|
| 2018 |
Fu K, Chronis C, Soufi A, Bonora G, Edwards M, Smale ST, Zaret KS, Plath K, Pellegrini M. Comparison of reprogramming factor targets reveals both species-specific and conserved mechanisms in early iPSC reprogramming. Bmc Genomics. 19: 956. PMID 30577748 DOI: 10.1186/S12864-018-5326-1 |
0.388 |
|
| 2018 |
Palozola KC, Lerner J, Zaret KS. A changing paradigm of transcriptional memory propagation through mitosis. Nature Reviews. Molecular Cell Biology. PMID 30420736 DOI: 10.1038/S41580-018-0077-Z |
0.487 |
|
| 2018 |
Kaeding KE, Zaret KS. Microsatellite enhancers can be targeted to impair tumorigenesis. Genes & Development. 32: 991-992. PMID 30068701 DOI: 10.1101/Gad.318105.118 |
0.316 |
|
| 2018 |
Zaret KS. The telomerase enzyme and liver renewal. Nature. 556: 181-182. PMID 29636575 DOI: 10.1038/D41586-018-02684-W |
0.356 |
|
| 2018 |
Zaret KS. Pioneering the chromatin landscape. Nature Genetics. PMID 29374252 DOI: 10.1038/S41588-017-0038-Z |
0.476 |
|
| 2018 |
Palozola KC, Liu H, Nicetto D, Zaret KS. Low-Level, Global Transcription during Mitosis and Dynamic Gene Reactivation during Mitotic Exit. Cold Spring Harbor Symposia On Quantitative Biology. PMID 29348325 DOI: 10.1101/Sqb.2017.82.034280 |
0.426 |
|
| 2017 |
Becker JS, McCarthy RL, Sidoli S, Donahue G, Kaeding KE, He Z, Lin S, Garcia BA, Zaret KS. Genomic and Proteomic Resolution of Heterochromatin and Its Restriction of Alternate Fate Genes. Molecular Cell. 68: 1023-1037.e15. PMID 29272703 DOI: 10.1016/J.Molcel.2017.11.030 |
0.448 |
|
| 2017 |
Palozola KC, Donahue G, Liu H, Grant GR, Becker JS, Cote A, Yu H, Raj A, Zaret KS. Mitotic transcription and waves of gene reactivation during mitotic exit. Science (New York, N.Y.). PMID 28912132 DOI: 10.1126/Science.Aal4671 |
0.437 |
|
| 2017 |
Zaret KS. Cell fate conversion: a chromatin remodeling checkpoint revealed. Cell Research. PMID 28361895 DOI: 10.1038/Cr.2017.44 |
0.416 |
|
| 2016 |
Bhat N, Park J, Zoghbi HY, Arthur JS, Zaret KS. The Chromatin Modifier MSK1/2 Suppresses Endocrine Cell Fates during Mouse Pancreatic Development. Plos One. 11: e0166703. PMID 27973548 DOI: 10.1371/Journal.Pone.0166703 |
0.381 |
|
| 2016 |
Yokoyama Y, Zhu H, Lee JH, Kossenkov AV, Wu SY, Wickramasinghe JM, Yin X, Palozola KC, Gardini A, Showe LC, Zaret KS, Liu Q, Speicher D, Conejo-Garcia JR, Bradner JE, et al. BET Inhibitors Suppress ALDH Activity by Targeting ALDH1A1 Super-Enhancer in Ovarian Cancer. Cancer Research. 76: 6320-6330. PMID 27803105 DOI: 10.1158/0008-5472.Can-16-0854 |
0.328 |
|
| 2016 |
Zaret KS, Lerner J, Iwafuchi-Doi M. Chromatin Scanning by Dynamic Binding of Pioneer Factors. Molecular Cell. 62: 665-7. PMID 27259199 DOI: 10.1016/J.Molcel.2016.05.024 |
0.466 |
|
| 2016 |
Iwafuchi-Doi M, Zaret KS. Cell fate control by pioneer transcription factors. Development (Cambridge, England). 143: 1833-7. PMID 27246709 DOI: 10.1242/Dev.133900 |
0.493 |
|
| 2016 |
Iwafuchi-Doi M, Donahue G, Kakumanu A, Watts JA, Mahony S, Pugh BF, Lee D, Kaestner KH, Zaret KS. The Pioneer Transcription Factor FoxA Maintains an Accessible Nucleosome Configuration at Enhancers for Tissue-Specific Gene Activation. Molecular Cell. 62: 79-91. PMID 27058788 DOI: 10.1016/J.Molcel.2016.03.001 |
0.527 |
|
| 2016 |
Zaret KS. From Endoderm to Liver Bud: Paradigms of Cell Type Specification and Tissue Morphogenesis. Current Topics in Developmental Biology. 117: 647-69. PMID 26970006 DOI: 10.1016/Bs.Ctdb.2015.12.015 |
0.443 |
|
| 2016 |
Braga Malta DF, Reticker-Flynn NE, da Silva CL, Cabral JM, Fleming HE, Zaret KS, Bhatia SN, Underhill GH. Extracellular matrix microarrays to study inductive signaling for endoderm specification. Acta Biomaterialia. 34: 30-40. PMID 26883775 DOI: 10.1016/J.Actbio.2016.02.014 |
0.394 |
|
| 2016 |
Zaret KS, Mango SE. Pioneer transcription factors, chromatin dynamics, and cell fate control. Current Opinion in Genetics & Development. 37: 76-81. PMID 26826681 DOI: 10.1016/J.Gde.2015.12.003 |
0.52 |
|
| 2016 |
Becker JS, Nicetto D, Zaret KS. H3K9me3-Dependent Heterochromatin: Barrier to Cell Fate Changes. Trends in Genetics : Tig. 32: 29-41. PMID 26675384 DOI: 10.1016/J.Tig.2015.11.001 |
0.485 |
|
| 2015 |
Hsu HT, Chen HM, Yang Z, Wang J, Lee NK, Burger A, Zaret K, Liu T, Levine E, Mango SE. Erratum for the Report “Recruitment of RNA polymerase II by the pioneer transcription factor PHA-4” Science. 350: 5928. PMID 26472915 DOI: 10.1126/Science.Aad5928 |
0.303 |
|
| 2015 |
Zaret KS. Regenerative biology: Maintaining liver mass. Nature. 524: 165-6. PMID 26245376 DOI: 10.1038/Nature15201 |
0.377 |
|
| 2015 |
Hsu HT, Chen HM, Yang Z, Wang J, Lee NK, Burger A, Zaret K, Liu T, Levine E, Mango SE. TRANSCRIPTION. Recruitment of RNA polymerase II by the pioneer transcription factor PHA-4. Science (New York, N.Y.). 348: 1372-6. PMID 26089518 DOI: 10.1126/Science.Aab1223 |
0.438 |
|
| 2015 |
Soufi A, Garcia MF, Jaroszewicz A, Osman N, Pellegrini M, Zaret KS. Pioneer transcription factors target partial DNA motifs on nucleosomes to initiate reprogramming. Cell. 161: 555-68. PMID 25892221 DOI: 10.1016/J.Cell.2015.03.017 |
0.494 |
|
| 2015 |
Shimbo T, Lavender C, Grimm SA, Doi MI, Henriques T, Cannady KR, Murphy KJ, Gilchrist DA, Burkholder A, Hayes JJ, Adelman K, Archer TK, Zaret KS, Wade PA. Abstract 2862: MBD3 regulates chromatin accessibility at active promoters Cancer Research. 75: 2862-2862. DOI: 10.1158/1538-7445.Am2015-2862 |
0.469 |
|
| 2014 |
Iwafuchi-Doi M, Zaret KS. Pioneer transcription factors in cell reprogramming. Genes & Development. 28: 2679-92. PMID 25512556 DOI: 10.1101/Gad.253443.114 |
0.535 |
|
| 2014 |
Xu CR, Li LC, Donahue G, Ying L, Zhang YW, Gadue P, Zaret KS. Dynamics of genomic H3K27me3 domains and role of EZH2 during pancreatic endocrine specification. The Embo Journal. 33: 2157-70. PMID 25107471 DOI: 10.15252/Embj.201488671 |
0.415 |
|
| 2014 |
Bhatia SN, Underhill GH, Zaret KS, Fox IJ. Cell and tissue engineering for liver disease. Science Translational Medicine. 6: 245sr2. PMID 25031271 DOI: 10.1126/Scitranslmed.3005975 |
0.344 |
|
| 2014 |
Zaret KS. Genome reactivation after the silence in mitosis: recapitulating mechanisms of development? Developmental Cell. 29: 132-4. PMID 24780732 DOI: 10.1016/J.Devcel.2014.04.019 |
0.463 |
|
| 2014 |
Kim J, Zaret KS. Abstract B116: Modeling of early to invasive stages of pancreatic cancer progression with an iPSC-like line from human pancreatic ductal adenocarcinoma Cancer Research. 75. DOI: 10.1158/1538-7445.Panca2014-B116 |
0.311 |
|
| 2013 |
Kim J, Hoffman JP, Alpaugh RK, Rhim AD, Rhimm AD, Reichert M, Stanger BZ, Furth EE, Sepulveda AR, Yuan CX, Won KJ, Donahue G, Sands J, Gumbs AA, Zaret KS. An iPSC line from human pancreatic ductal adenocarcinoma undergoes early to invasive stages of pancreatic cancer progression. Cell Reports. 3: 2088-99. PMID 23791528 DOI: 10.1016/J.Celrep.2013.05.036 |
0.309 |
|
| 2013 |
Lagha M, Mayeuf-Louchart A, Chang T, Montarras D, Rocancourt D, Zalc A, Kormish J, Zaret KS, Buckingham ME, Relaix F. Itm2a is a Pax3 target gene, expressed at sites of skeletal muscle formation in vivo. Plos One. 8: e63143. PMID 23650549 DOI: 10.1371/Journal.Pone.0063143 |
0.378 |
|
| 2013 |
Soufi A, Zaret KS. Understanding impediments to cellular conversion to pluripotency by assessing the earliest events in ectopic transcription factor binding to the genome. Cell Cycle (Georgetown, Tex.). 12: 1487-91. PMID 23603987 DOI: 10.4161/Cc.24663 |
0.482 |
|
| 2013 |
Caravaca JM, Donahue G, Becker JS, He X, Vinson C, Zaret KS. Bookmarking by specific and nonspecific binding of FoxA1 pioneer factor to mitotic chromosomes. Genes & Development. 27: 251-60. PMID 23355396 DOI: 10.1186/1756-8935-6-S1-P94 |
0.486 |
|
| 2013 |
Iwafuchi-Doi M, Donahue G, Watts J, Cuesta I, Zaret KS. Pioneer transcription factor FoxA is positioned on hypersensitive nucleosomes at active enhancers Epigenetics & Chromatin. 6. DOI: 10.1186/1756-8935-6-S1-P30 |
0.504 |
|
| 2013 |
Zaret K, Palozola K, Caravaca JM. Activating the genome during development and exit from mitosis Epigenetics & Chromatin. 6: 1-1. DOI: 10.1186/1756-8935-6-S1-O35 |
0.532 |
|
| 2012 |
Soufi A, Donahue G, Zaret KS. Facilitators and impediments of the pluripotency reprogramming factors' initial engagement with the genome. Cell. 151: 994-1004. PMID 23159369 DOI: 10.1016/J.Cell.2012.09.045 |
0.48 |
|
| 2012 |
Serup P, Gustavsen C, Klein T, Potter LA, Lin R, Mullapudi N, Wandzioch E, Hines A, Davis A, Bruun C, Engberg N, Petersen DR, Peterslund JM, Macdonald RJ, Grapin-Botton A, ... ... Zaret KS, et al. Partial promoter substitutions generating transcriptional sentinels of diverse signaling pathways in embryonic stem cells and mice. Disease Models & Mechanisms. 5: 956-66. PMID 22888097 DOI: 10.1242/Dmm.009696 |
0.39 |
|
| 2012 |
Xu CR, Zaret KS. Chromatin "pre-pattern" and epigenetic modulation in the cell fate choice of liver over pancreas in the endoderm. Nucleus (Austin, Tex.). 3: 150-4. PMID 22555599 DOI: 10.4161/Nucl.19321 |
0.462 |
|
| 2012 |
Metzger DE, Gasperowicz M, Otto F, Cross JC, Gradwohl G, Zaret KS. The transcriptional co-repressor Grg3/Tle3 promotes pancreatic endocrine progenitor delamination and β-cell differentiation. Development (Cambridge, England). 139: 1447-56. PMID 22434868 DOI: 10.1242/Dev.072892 |
0.418 |
|
| 2012 |
Petersen DR, Gustavsen C, Lindskog SR, Magnuson MA, Zaret KS, Serup P. Engineering artificial signaling centers to polarize embryoid body differentiation. Stem Cells and Development. 21: 647-53. PMID 21958075 DOI: 10.1089/Scd.2011.0344 |
0.321 |
|
| 2012 |
Kim J, Zaret KS, Hoffman JP, Reichert M, Rhim AD, Stanger BZ, Gumbs A. Abstract B98: Induced pluripotent stem cells from pancreatic ductal adenocarcinoma can recapitulate early developmental stages of cancer. Cancer Research. 72. DOI: 10.1158/1538-7445.Panca2012-B98 |
0.316 |
|
| 2011 |
Zaret KS, Carroll JS. Pioneer transcription factors: establishing competence for gene expression. Genes & Development. 25: 2227-41. PMID 22056668 DOI: 10.1101/Gad.176826.111 |
0.523 |
|
| 2011 |
Watts JA, Zhang C, Klein-Szanto AJ, Kormish JD, Fu J, Zhang MQ, Zaret KS. Study of FoxA pioneer factor at silent genes reveals Rfx-repressed enhancer at Cdx2 and a potential indicator of esophageal adenocarcinoma development. Plos Genetics. 7: e1002277. PMID 21935353 DOI: 10.1371/Journal.Pgen.1002277 |
0.462 |
|
| 2011 |
Xu CR, Cole PA, Meyers DJ, Kormish J, Dent S, Zaret KS. Chromatin "prepattern" and histone modifiers in a fate choice for liver and pancreas. Science (New York, N.Y.). 332: 963-6. PMID 21596989 DOI: 10.1126/Science.1202845 |
0.471 |
|
| 2011 |
Metzger D, Gasperowicz M, Otto F, Cross J, Zaret K. Grg3 corepressor is required for the differentiation of secondary transition endocrine cells in the embryonic pancreas Developmental Biology. 356: 189-190. DOI: 10.1016/J.Ydbio.2011.05.240 |
0.328 |
|
| 2010 |
Zaret KS, Caravaca JM, Tulin A, Sekiya T. Nuclear mobility and mitotic chromosome binding similarities between pioneer transcription factor FoxA and linker histone H1 Cold Spring Harbor Symposia On Quantitative Biology. 75: 219-226. PMID 21502411 DOI: 10.1101/Sqb.2010.75.061 |
0.5 |
|
| 2010 |
Santisteban P, Recacha P, Metzger DE, Zaret KS. Dynamic expression of Groucho-related genes Grg1 and Grg3 in foregut endoderm and antagonism of differentiation. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 239: 980-6. PMID 20108349 DOI: 10.1002/Dvdy.22217 |
0.443 |
|
| 2009 |
Xu J, Watts JA, Pope SD, Gadue P, Kamps M, Plath K, Zaret KS, Smale ST. Transcriptional competence and the active marking of tissue-specific enhancers by defined transcription factors in embryonic and induced pluripotent stem cells. Genes & Development. 23: 2824-38. PMID 20008934 DOI: 10.1101/Gad.1861209 |
0.482 |
|
| 2009 |
Wandzioch E, Zaret KS. Dynamic signaling network for the specification of embryonic pancreas and liver progenitors. Science (New York, N.Y.). 324: 1707-10. PMID 19556507 DOI: 10.1126/Science.1174497 |
0.419 |
|
| 2009 |
Gadue P, Gouon-Evans V, Cheng X, Wandzioch E, Zaret KS, Grompe M, Streeter PR, Keller GM. Generation of monoclonal antibodies specific for cell surface molecules expressed on early mouse endoderm. Stem Cells (Dayton, Ohio). 27: 2103-13. PMID 19522011 DOI: 10.1002/Stem.147 |
0.315 |
|
| 2009 |
Zaret KS. Using small molecules to great effect in stem cell differentiation. Cell Stem Cell. 4: 373-4. PMID 19427285 DOI: 10.1016/J.Stem.2009.04.012 |
0.328 |
|
| 2009 |
Sekiya T, Muthurajan UM, Luger K, Tulin AV, Zaret KS. Nucleosome-binding affinity as a primary determinant of the nuclear mobility of the pioneer transcription factor FoxA. Genes & Development. 23: 804-9. PMID 19339686 DOI: 10.1101/Gad.1775509 |
0.466 |
|
| 2009 |
Cortellino S, Wang C, Wang B, Bassi MR, Caretti E, Champeval D, Calmont A, Jarnik M, Burch J, Zaret KS, Larue L, Bellacosa A. Defective ciliogenesis, embryonic lethality and severe impairment of the Sonic Hedgehog pathway caused by inactivation of the mouse complex A intraflagellar transport gene Ift122/Wdr10, partially overlapping with the DNA repair gene Med1/Mbd4. Developmental Biology. 325: 225-37. PMID 19000668 DOI: 10.1016/J.Ydbio.2008.10.020 |
0.308 |
|
| 2009 |
Bort R, Zaret KS. Embryonic Development of the Liver The Liver: Biology and Pathobiology: Fifth Edition. 17-25. DOI: 10.1002/9780470747919.Ch2 |
0.335 |
|
| 2008 |
Zaret KS, Grompe M. Generation and regeneration of cells of the liver and pancreas. Science (New York, N.Y.). 322: 1490-4. PMID 19056973 DOI: 10.1126/Science.1161431 |
0.435 |
|
| 2008 |
Zaret KS, Watts J, Xu J, Wandzioch E, Smale ST, Sekiya T. Pioneer factors, genetic competence, and inductive signaling: programming liver and pancreas progenitors from the endoderm. Cold Spring Harbor Symposia On Quantitative Biology. 73: 119-26. PMID 19028990 DOI: 10.1101/Sqb.2008.73.040 |
0.522 |
|
| 2008 |
Lagha M, Kormish JD, Rocancourt D, Manceau M, Epstein JA, Zaret KS, Relaix F, Buckingham ME. Pax3 regulation of FGF signaling affects the progression of embryonic progenitor cells into the myogenic program. Genes & Development. 22: 1828-37. PMID 18593883 DOI: 10.1101/Gad.477908 |
0.457 |
|
| 2008 |
Zaret KS. Genetic programming of liver and pancreas progenitors: lessons for stem-cell differentiation. Nature Reviews. Genetics. 9: 329-40. PMID 18398419 DOI: 10.1038/Nrg2318 |
0.389 |
|
| 2008 |
Wandzioch E, Zaret KS. Endoderm cell signaling networks during liver and pancreas specification Developmental Biology. 319: 585. DOI: 10.1016/J.Ydbio.2008.05.420 |
0.331 |
|
| 2008 |
Freedman-Cass DA, Zaret KS. Endothelial responsiveness of Ptf1a and other genes in liver and dorsal pancreas progenitors Developmental Biology. 319: 573. DOI: 10.1016/J.Ydbio.2008.05.375 |
0.325 |
|
| 2007 |
Freedman DA, Kashima Y, Zaret KS. Endothelial cell promotion of early liver and pancreas development. Novartis Foundation Symposium. 283: 207-16; discussion 2. PMID 18300424 DOI: 10.1002/9780470319413.Ch16 |
0.387 |
|
| 2007 |
Sekiya T, Zaret KS. Repression by Groucho/TLE/Grg proteins: genomic site recruitment generates compacted chromatin in vitro and impairs activator binding in vivo. Molecular Cell. 28: 291-303. PMID 17964267 DOI: 10.1016/J.Molcel.2007.10.002 |
0.469 |
|
| 2007 |
Cuesta I, Zaret KS, Santisteban P. The forkhead factor FoxE1 binds to the thyroperoxidase promoter during thyroid cell differentiation and modifies compacted chromatin structure. Molecular and Cellular Biology. 27: 7302-14. PMID 17709379 DOI: 10.1128/Mcb.00758-07 |
0.478 |
|
| 2007 |
Xu J, Pope SD, Jazirehi AR, Attema JL, Papathanasiou P, Watts JA, Zaret KS, Weissman IL, Smale ST. Pioneer factor interactions and unmethylated CpG dinucleotides mark silent tissue-specific enhancers in embryonic stem cells. Proceedings of the National Academy of Sciences of the United States of America. 104: 12377-82. PMID 17640912 DOI: 10.1073/Pnas.0704579104 |
0.506 |
|
| 2007 |
Wiebe PO, Kormish JD, Roper VT, Fujitani Y, Alston NI, Zaret KS, Wright CV, Stein RW, Gannon M. Ptf1a binds to and activates area III, a highly conserved region of the Pdx1 promoter that mediates early pancreas-wide Pdx1 expression. Molecular and Cellular Biology. 27: 4093-104. PMID 17403901 DOI: 10.1128/Mcb.01978-06 |
0.402 |
|
| 2007 |
Cirillo LA, Zaret KS. Specific interactions of the wing domains of FOXA1 transcription factor with DNA. Journal of Molecular Biology. 366: 720-4. PMID 17189638 DOI: 10.1016/J.Jmb.2006.11.087 |
0.399 |
|
| 2007 |
Wiebe PO, Kormish JD, Fujitani Y, Zaret KS, Wright CV, Stein RW, Gannon. Ptf1a binds to Area III, a highly conserved region of the Pdx1 promoter that mediates early pancreas-wide Pdx1 expression Developmental Biology. 306: 353-354. DOI: 10.1016/J.Ydbio.2007.03.225 |
0.362 |
|
| 2006 |
Calmont A, Wandzioch E, Tremblay KD, Minowada G, Kaestner KH, Martin GR, Zaret KS. An FGF response pathway that mediates hepatic gene induction in embryonic endoderm cells. Developmental Cell. 11: 339-48. PMID 16950125 DOI: 10.1016/J.Devcel.2006.06.015 |
0.389 |
|
| 2006 |
Zaret KS. Stability and evolution of transcriptional regulatory networks. Molecular Systems Biology. 2: 2006.0021. PMID 16738566 DOI: 10.1038/Msb4100066 |
0.492 |
|
| 2006 |
West S, Zaret K, Proudfoot NJ. Transcriptional termination sequences in the mouse serum albumin gene Rna. 12: 655-665. PMID 16581808 DOI: 10.1261/Rna.2232406 |
0.385 |
|
| 2006 |
Jacquemin P, Yoshitomi H, Kashima Y, Rousseau GG, Lemaigre FP, Zaret KS. An endothelial-mesenchymal relay pathway regulates early phases of pancreas development. Developmental Biology. 290: 189-99. PMID 16386727 DOI: 10.1016/J.Ydbio.2005.11.023 |
0.405 |
|
| 2006 |
Bort R, Signore M, Tremblay K, Martinez Barbera JP, Zaret KS. Hex homeobox gene controls the transition of the endoderm to a pseudostratified, cell emergent epithelium for liver bud development. Developmental Biology. 290: 44-56. PMID 16364283 DOI: 10.1016/J.Ydbio.2005.11.006 |
0.416 |
|
| 2005 |
Zaret K. Micrococcal Nuclease Analysis of Chromatin Structure Current Protocols in Molecular Biology. 69. PMID 18265356 DOI: 10.1002/0471142727.Mb2101S69 |
0.381 |
|
| 2005 |
Tremblay KD, Zaret KS. Distinct populations of endoderm cells converge to generate the embryonic liver bud and ventral foregut tissues. Developmental Biology. 280: 87-99. PMID 15766750 DOI: 10.1016/J.Ydbio.2005.01.003 |
0.365 |
|
| 2005 |
Holmqvist PH, Belikov S, Zaret KS, Wrange O. FoxA1 binding to the MMTV LTR modulates chromatin structure and transcription. Experimental Cell Research. 304: 593-603. PMID 15748903 DOI: 10.1016/J.Yexcr.2004.12.002 |
0.46 |
|
| 2004 |
Lemaigre F, Zaret KS. Liver development update: new embryo models, cell lineage control, and morphogenesis. Current Opinion in Genetics & Development. 14: 582-90. PMID 15380251 DOI: 10.1016/J.Gde.2004.08.004 |
0.425 |
|
| 2004 |
Cirillo L, Zaret K. Developmental biology. A linker histone restricts muscle development. Science (New York, N.Y.). 304: 1607-9. PMID 15192207 DOI: 10.1126/Science.1099577 |
0.373 |
|
| 2004 |
Taganov KD, Cuesta I, Daniel R, Cirillo LA, Katz RA, Zaret KS, Skalka AM. Integrase-specific enhancement and suppression of retroviral DNA integration by compacted chromatin structure in vitro. Journal of Virology. 78: 5848-55. PMID 15140982 DOI: 10.1128/Jvi.78.11.5848-5855.2004 |
0.397 |
|
| 2004 |
Chaya D, Zaret KS. Sequential chromatin immunoprecipitation from animal tissues. Methods in Enzymology. 376: 361-72. PMID 14975318 DOI: 10.1016/S0076-6879(03)76024-8 |
0.435 |
|
| 2004 |
Cirillo LA, Zaret KS. Preparation of defined mononucleosomes, dinucleosomes, and nucleosome arrays in vitro and analysis of transcription factor binding. Methods in Enzymology. 375: 131-58. PMID 14870664 DOI: 10.1016/S0076-6879(03)75009-5 |
0.472 |
|
| 2004 |
Bort R, Martinez-Barbera JP, Beddington RS, Zaret KS. Hex homeobox gene-dependent tissue positioning is required for organogenesis of the ventral pancreas. Development (Cambridge, England). 131: 797-806. PMID 14736744 DOI: 10.1242/Dev.00965 |
0.427 |
|
| 2004 |
Yoshitomi H, Zaret KS. Endothelial cell interactions initiate dorsal pancreas development by selectively inducing the transcription factor Ptf1a. Development (Cambridge, England). 131: 807-17. PMID 14736742 DOI: 10.1242/Dev.00960 |
0.411 |
|
| 2003 |
Istomina NE, Shushanov SS, Springhetti EM, Karpov VL, Krasheninnikov IA, Stevens K, Zaret KS, Singh PB, Grigoryev SA. Insulation of the chicken beta-globin chromosomal domain from a chromatin-condensing protein, MENT. Molecular and Cellular Biology. 23: 6455-68. PMID 12944473 DOI: 10.1128/Mcb.23.18.6455-6468.2003 |
0.404 |
|
| 2003 |
Parviz F, Matullo C, Garrison WD, Savatski L, Adamson JW, Ning G, Kaestner KH, Rossi JM, Zaret KS, Duncan SA. Hepatocyte nuclear factor 4alpha controls the development of a hepatic epithelium and liver morphogenesis. Nature Genetics. 34: 292-6. PMID 12808453 DOI: 10.1038/Ng1175 |
0.7 |
|
| 2003 |
Guo Y, Chan R, Ramsey H, Li W, Xie X, Shelley WC, Martinez-Barbera JP, Bort B, Zaret K, Yoder M, Hromas R. The homeoprotein Hex is required for hemangioblast differentiation. Blood. 102: 2428-35. PMID 12791650 DOI: 10.1182/Blood-2003-02-0634 |
0.398 |
|
| 2003 |
Deng Z, Chen CJ, Chamberlin M, Lu F, Blobel GA, Speicher D, Cirillo LA, Zaret KS, Lieberman PM. The CBP bromodomain and nucleosome targeting are required for Zta-directed nucleosome acetylation and transcription activation. Molecular and Cellular Biology. 23: 2633-44. PMID 12665567 DOI: 10.1128/Mcb.23.8.2633-2644.2003 |
0.445 |
|
| 2003 |
Mohn D, Chen SW, Dias DC, Weinstein DC, Dyer MA, Sahr K, Ducker CE, Zahradka E, Keller G, Zaret KS, Gudas LJ, Baron MH. Mouse Mix gene is activated early during differentiation of ES and F9 stem cells and induces endoderm in frog embryos. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 226: 446-59. PMID 12619131 DOI: 10.1002/Dvdy.10263 |
0.407 |
|
| 2003 |
Zaret KS. MOD special issue on the molecular mechanisms of liver and pancreas development Mechanisms of Development. 120: 3. DOI: 10.1016/S0925-4773(02)00326-X |
0.306 |
|
| 2002 |
Bort R, Zaret K. Paths to the pancreas Nature Genetics. 32: 85-86. PMID 12205472 DOI: 10.1038/Ng0902-85 |
0.452 |
|
| 2002 |
Lin X, Jung J, Kang D, Xu B, Zaret KS, Zoghbi H. Prenylcysteine carboxylmethyltransferase is essential for the earliest stages of liver development in mice. Gastroenterology. 123: 345-51. PMID 12105862 DOI: 10.1053/Gast.2002.34279 |
0.584 |
|
| 2002 |
Zaret KS. Regulatory phases of early liver development: paradigms of organogenesis. Nature Reviews. Genetics. 3: 499-512. PMID 12094228 DOI: 10.1038/Nrg837 |
0.416 |
|
| 2002 |
Cirillo LA, Lin FR, Cuesta I, Friedman D, Jarnik M, Zaret KS. Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4. Molecular Cell. 9: 279-89. PMID 11864602 DOI: 10.1016/S1097-2765(02)00459-8 |
0.516 |
|
| 2001 |
Matsumoto K, Yoshitomi H, Rossant J, Zaret KS. Liver organogenesis promoted by endothelial cells prior to vascular function Science. 294: 559-563. PMID 11577199 DOI: 10.1126/Science.1063889 |
0.363 |
|
| 2001 |
Chaya D, Hayamizu T, Bustin M, Zaret KS. Transcription Factor FoxA (HNF3) on a Nucleosome at an Enhancer Complex in Liver Chromatin Journal of Biological Chemistry. 276: 44385-44389. PMID 11571307 DOI: 10.1074/Jbc.M108214200 |
0.491 |
|
| 2001 |
Zaret KS. Hepatocyte differentiation: From the endoderm and beyond Current Opinion in Genetics and Development. 11: 568-574. PMID 11532400 DOI: 10.1016/S0959-437X(00)00234-3 |
0.389 |
|
| 2001 |
Rossi JM, Dunn NR, Hogan BL, Zaret KS. Distinct mesodermal signals, including BMPs from the septum transversum mesenchyme, are required in combination for hepatogenesis from the endoderm. Genes & Development. 15: 1998-2009. PMID 11485993 DOI: 10.1101/Gad.904601 |
0.715 |
|
| 2001 |
Deutsch G, Jung J, Zheng M, Lóra J, Zaret KS. A bipotential precursor population for pancreas and liver within the embryonic endoderm. Development (Cambridge, England). 128: 871-81. PMID 11222142 |
0.605 |
|
| 2000 |
Bossard P, Zaret KS. Repressive and restrictive mesodermal interactions with gut endoderm: Possible relation to Meckel's Diverticulum Development. 127: 4915-4923. PMID 11044405 |
0.362 |
|
| 2000 |
Stevens K, Cirillo L, Zaret KS. Creating temperature-sensitive winged helix transcription factors. Amino acids that stabilize the DNA binding domain of HNF3 Journal of Biological Chemistry. 275: 30471-30477. PMID 10896667 DOI: 10.1074/Jbc.M004891200 |
0.405 |
|
| 2000 |
Zaret KS. Liver specification and early morphogenesis Mechanisms of Development. 92: 83-88. PMID 10704889 DOI: 10.1016/S0925-4773(99)00326-3 |
0.407 |
|
| 1999 |
Cirillo LA, Zaret KS. An early developmental transcription factor complex that is more stable on nucleosome core particles than on free DNA Molecular Cell. 4: 961-969. PMID 10635321 DOI: 10.1016/S1097-2765(00)80225-7 |
0.506 |
|
| 1999 |
Jung J, Zheng M, Goldfarb M, Zaret KS. Initiation of mammalian liver development from endoderm by fibroblast growth factors. Science (New York, N.Y.). 284: 1998-2003. PMID 10373120 DOI: 10.1126/Science.284.5422.1998 |
0.612 |
|
| 1999 |
Zaret KS. In vivo analysis of chromatin structure Methods in Enzymology. 304: 612-626. PMID 10372385 DOI: 10.1016/S0076-6879(99)04036-7 |
0.366 |
|
| 1999 |
Zaret K. Developmental competence of the gut endoderm: genetic potentiation by GATA and HNF3/fork head proteins. Developmental Biology. 209: 1-10. PMID 10208738 DOI: 10.1006/Dbio.1999.9228 |
0.42 |
|
| 1998 |
Bossard P, Zaret KS. GATA transcription factors as potentiators of gut endoderm differentiation Development. 125: 4909-4917. PMID 9811575 |
0.437 |
|
| 1998 |
Zaret K. Early liver differentiation: genetic potentiation and multilevel growth control. Current Opinion in Genetics & Development. 8: 526-31. PMID 9794819 DOI: 10.1016/S0959-437X(98)80006-3 |
0.479 |
|
| 1998 |
Lora JM, Rowader KE, Soares L, Giancotti F, Zaret KS. Alpha3beta1-integrin as a critical mediator of the hepatic differentiation response to the extracellular matrix. Hepatology (Baltimore, Md.). 28: 1095-104. PMID 9755248 DOI: 10.1002/Hep.510280426 |
0.378 |
|
| 1998 |
Lodmell AG, Jung J, Zaret KS. Chromatin structure and functional analysis of the mouse HNF3alpha gene. Gene. 214: 167-76. PMID 9651517 DOI: 10.1016/S0378-1119(98)00198-X |
0.665 |
|
| 1998 |
Cirillo LA, McPherson CE, Bossard P, Stevens K, Cherian S, Shim EY, Clark KL, Burley SK, Zaret KS. Binding of the winged-helix transcription factor HNF3 to a linker histone site on the nucleosome. The Embo Journal. 17: 244-54. PMID 9427758 DOI: 10.1093/Emboj/17.1.244 |
0.478 |
|
| 1998 |
Shim EY, Woodcock C, Zaret KS. Nucleosome positioning by the winged helix transcription factor HNF3. Genes & Development. 12: 5-10. PMID 9420326 DOI: 10.1101/Gad.12.1.5 |
0.461 |
|
| 1997 |
Bossard P, McPherson CE, Zaret KS. In vivo footprinting with limiting amounts of embryo tissues: A role for C/EBPβ in early hepatic development Methods: a Companion to Methods in Enzymology. 11: 180-188. PMID 8993030 DOI: 10.1006/Meth.1996.0404 |
0.463 |
|
| 1996 |
Zaret KS. Molecular genetics of early liver development Annual Review of Physiology. 58: 231-251. PMID 8815794 DOI: 10.1146/Annurev.Ph.58.030196.001311 |
0.412 |
|
| 1996 |
Gualdi R, Bossard P, Zheng M, Hamada Y, Coleman JR, Zaret KS. Hepatic specification of the gut endoderm in vitro: cell signaling and transcriptional control. Genes & Development. 10: 1670-82. PMID 8682297 DOI: 10.1101/Gad.10.13.1670 |
0.516 |
|
| 1996 |
McPherson CE, Horowitz R, Woodcock CL, Jiang C, Zaret KS. Nucleosome positioning properties of the albumin transcriptional enhancer. Nucleic Acids Research. 24: 397-404. PMID 8602349 DOI: 10.1093/Nar/24.3.397 |
0.469 |
|
| 1995 |
Zaret KS, Stevens K. Expression of a Highly Unstable and Insoluble Transcription Factor inEscherichia coli:Purification and Characterization of thefork headHomolog Hnf3α Protein Expression and Purification. 6: 821-825. PMID 8746635 DOI: 10.1006/Prep.1995.0014 |
0.398 |
|
| 1995 |
Zaret KS. Nucleoprotein architecture of the albumin transcriptional enhancer Seminars in Cell and Developmental Biology. 6: 209-218. PMID 8562913 DOI: 10.1006/Scel.1995.0029 |
0.46 |
|
| 1995 |
Connelly S, Smith TA, Dhir G, Gardner JM, Mehaffey MG, Zaret KS, McClelland A, Kaleko M. In vivo gene delivery and expression of physiological levels of functional human factor VIII in mice. Human Gene Therapy. 6: 185-93. PMID 7537539 DOI: 10.1089/Hum.1995.6.2-185 |
0.315 |
|
| 1994 |
Zaret K. Genes that control the formation of the liver. Hepatology (Baltimore, Md.). 19: 794-6. PMID 8119710 DOI: 10.1002/Hep.1840190339 |
0.399 |
|
| 1993 |
Jackson DA, Rowader KE, Stevens K, Jiang C, Milos P, Zaret KS. Modulation of liver-specific transcription by interactions between hepatocyte nuclear factor 3 and nuclear factor 1 binding DNA in close apposition Molecular and Cellular Biology. 13: 2401-2410. PMID 8455618 DOI: 10.1128/Mcb.13.4.2401 |
0.49 |
|
| 1993 |
Rollier A, DiPersio CM, Cereghini S, Stevens K, Tronche F, Zaret K, Weiss MC. Regulation of albumin gene expression in hepatoma cells of fetal phenotype: dominant inhibition of HNF1 function and role of ubiquitous transcription factors. Molecular Biology of the Cell. 4: 59-69. PMID 8443410 DOI: 10.1091/Mbc.4.1.59 |
0.499 |
|
| 1993 |
McPherson CE, Shim EY, Friedman DS, Zaret KS. An active tissue-specific enhancer and bound transcription factors existing in a precisely positioned nucleosomal array Cell. 75: 387-398. PMID 8402920 DOI: 10.1016/0092-8674(93)80079-T |
0.507 |
|
| 1993 |
Ang SL, Wierda A, Wong D, Stevens KA, Cascio S, Rossant J, Zaret KS. The formation and maintenance of the definitive endoderm lineage in the mouse: involvement of HNF3/forkhead proteins. Development (Cambridge, England). 119: 1301-15. PMID 8306889 |
0.322 |
|
| 1992 |
Zaret KS. The touch that hepatocytes seem to like Hepatology. 15: 1204-1205. PMID 1592357 DOI: 10.1002/Hep.1840150636 |
0.359 |
|
| 1992 |
Milos PM, Zaret KS. A ubiquitous factor is required for C/EBP-related proteins to form stable transcription complexes on an albumin promoter segment in vitro Genes and Development. 6: 991-1004. PMID 1592265 DOI: 10.1101/Gad.6.6.991 |
0.44 |
|
| 1992 |
Zaret KS, Milos P, Lia M, Bali D, Gluecksohn-Waelsch S. Selective loss of a DNase I hypersensitive site upstream of the tyrosine aminotransferase gene in mice homozygous for lethal albino deletions Proceedings of the National Academy of Sciences of the United States of America. 89: 6540-6544. PMID 1378630 DOI: 10.1073/Pnas.89.14.6540 |
0.416 |
|
| 1991 |
Liu JK, DiPersio CM, Zaret KS. Extracellular signals that regulate liver transcription factors during hepatic differentiation in vitro. Molecular and Cellular Biology. 11: 773-84. PMID 1990282 DOI: 10.1128/Mcb.11.2.773 |
0.503 |
|
| 1991 |
DiPersio CM, Jackson DA, Zaret KS. The extracellular matrix coordinately modulates liver transcription factors and hepatocyte morphology. Molecular and Cellular Biology. 11: 4405-14. PMID 1875930 DOI: 10.1128/Mcb.11.9.4405 |
0.485 |
|
| 1990 |
Zaret KS, Liu JK, DiPersio CM. Site-directed mutagenesis reveals a liver transcription factor essential for the albumin transcriptional enhancer. Proceedings of the National Academy of Sciences of the United States of America. 87: 5469-73. PMID 2371282 DOI: 10.1073/Pnas.87.14.5469 |
0.466 |
|
| 1990 |
Zaret KS, Stevens KA. Selection and analysis of galactose metabolic pathway variants of a mouse liver cell line. Molecular and Cellular Biology. 10: 4582-9. PMID 2167434 DOI: 10.1128/Mcb.10.9.4582 |
0.344 |
|
| 1988 |
Liu JK, Bergman Y, Zaret KS. The mouse albumin promoter and a distal upstream site are simultaneously DNase I hypersensitive in liver chromatin and bind similar liver-abundant factors in vitro Genes &Amp; Development. 2: 528-541. PMID 3384331 DOI: 10.1101/Gad.2.5.528 |
0.49 |
|
| 1988 |
Zaret KS, DiPersio CM, Jackson DA, Montigny WJ, Weinstat DL. Conditional enhancement of liver-specific gene transcription. Proceedings of the National Academy of Sciences of the United States of America. 85: 9076-80. PMID 3194409 DOI: 10.1073/Pnas.85.23.9076 |
0.449 |
|
| 1984 |
Zaret KS, Yamamoto KR. Reversible and persistent changes in chromatin structure accompany activation of a glucocorticoid-dependent enhancer element Cell. 38: 29-38. PMID 6088072 DOI: 10.1016/0092-8674(84)90523-3 |
0.435 |
|
| 1984 |
Zaret KS, Sherman F. Mutationally altered 3′ ends of yeast CYC1 mRNA affect transcript stability and translational efficiency Journal of Molecular Biology. 177: 107-135. PMID 6086937 DOI: 10.1016/0022-2836(84)90060-3 |
0.322 |
|
| 1982 |
Zaret KS, Sherman F. DNA sequence required for efficient transcription termination in yeast Cell. 28: 563-573. PMID 6280875 DOI: 10.1016/0092-8674(82)90211-2 |
0.37 |
|
| Show low-probability matches. |