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Esther Singer, Ph.D. - Publications

Affiliations: 
2013 Geological Sciences University of Southern California, Los Angeles, CA, United States 
Area:
Microbiology Biology, Geobiology
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12 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Sevim V, Lee J, Egan R, Clum A, Hundley H, Lee J, Everroad RC, Detweiler AM, Bebout BM, Pett-Ridge J, Göker M, Murray AE, Lindemann SR, Klenk HP, O'Malley R, ... ... Singer E, et al. Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies. Scientific Data. 6: 285. PMID 31772173 DOI: 10.1038/S41597-019-0287-Z  0.413
2019 Singer E, Bonnette J, Woyke T, Juenger TE. Conservation of Endophyte Bacterial Community Structure Across Two Grass Species. Frontiers in Microbiology. 10: 2181. PMID 31611851 DOI: 10.3389/Fmicb.2019.02181  0.394
2018 Singer E, Bonnette J, Kenaley S, Woyke T, Juenger TE. Plant compartment and genetic variation drive microbiome composition in switchgrass roots. Environmental Microbiology Reports. PMID 30537406 DOI: 10.1111/1758-2229.12727  0.316
2017 Bushnell B, Rood J, Singer E. BBMerge - Accurate paired shotgun read merging via overlap. Plos One. 12: e0185056. PMID 29073143 DOI: 10.1371/Journal.Pone.0185056  0.328
2017 Singer E, Wagner M, Woyke T. Capturing the genetic makeup of the active microbiome in situ. The Isme Journal. PMID 28574490 DOI: 10.1038/Ismej.2017.59  0.361
2016 Singer E, Andreopoulos B, Bowers RM, Lee J, Deshpande S, Chiniquy J, Ciobanu D, Klenk HP, Zane M, Daum C, Clum A, Cheng JF, Copeland A, Woyke T. Next generation sequencing data of a defined microbial mock community. Scientific Data. 3: 160081. PMID 27673566 DOI: 10.1038/Sdata.2016.81  0.437
2016 Bremges A, Singer E, Woyke T, Sczyrba A. MeCorS: Metagenome-enabled error correction of single cell sequencing reads. Bioinformatics (Oxford, England). PMID 27153586 DOI: 10.1093/Bioinformatics/Btw144  0.331
2016 Singer E, Bushnell B, Coleman-Derr D, Bowman B, Bowers RM, Levy A, Gies EA, Cheng JF, Copeland A, Klenk HP, Hallam SJ, Hugenholtz P, Tringe SG, Woyke T. High-resolution phylogenetic microbial community profiling. The Isme Journal. PMID 26859772 DOI: 10.1038/Ismej.2015.249  0.447
2015 Singer E, Chong LS, Heidelberg JF, Edwards KJ. Similar Microbial Communities Found on Two Distant Seafloor Basalts. Frontiers in Microbiology. 6: 1409. PMID 26733957 DOI: 10.3389/Fmicb.2015.01409  0.572
2013 Singer E, Heidelberg JF, Dhillon A, Edwards KJ. Metagenomic insights into the dominant Fe(II) oxidizing Zetaproteobacteria from an iron mat at Lō´ihi, Hawai´l. Frontiers in Microbiology. 4: 52. PMID 23518919 DOI: 10.3389/Fmicb.2013.00052  0.564
2011 Singer E, Emerson D, Webb EA, Barco RA, Kuenen JG, Nelson WC, Chan CS, Comolli LR, Ferriera S, Johnson J, Heidelberg JF, Edwards KJ. Mariprofundus ferrooxydans PV-1 the first genome of a marine Fe(II) oxidizing Zetaproteobacterium. Plos One. 6: e25386. PMID 21966516 DOI: 10.1371/Journal.Pone.0025386  0.599
2011 Singer E, Webb EA, Nelson WC, Heidelberg JF, Ivanova N, Pati A, Edwards KJ. Genomic potential of Marinobacter aquaeolei, a biogeochemical "opportunitroph". Applied and Environmental Microbiology. 77: 2763-71. PMID 21335390 DOI: 10.1128/Aem.01866-10  0.561
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