| Year |
Citation |
Score |
| 2023 |
Daugird TA, Shi Y, Holland KL, Rostamian H, Liu Z, Lavis LD, Rodriguez J, Strahl BD, Legant WR. Correlative single molecule lattice light sheet imaging reveals the dynamic relationship between nucleosomes and the local chromatin environment. Biorxiv : the Preprint Server For Biology. PMID 38014222 DOI: 10.1101/2023.11.09.566470 |
0.309 |
|
| 2023 |
Zhao S, Lu J, Pan B, Fan H, Byrum SD, Xu C, Kim A, Guo Y, Kanchi KL, Gong W, Sun T, Storey AJ, Burkholder NT, Mackintosh SG, Kuhlers PC, ... ... Strahl BD, et al. TNRC18 engages H3K9me3 to mediate silencing of endogenous retrotransposons. Nature. PMID 37938770 DOI: 10.1038/s41586-023-06688-z |
0.776 |
|
| 2023 |
Muneer A, Wang L, Xie L, Zhang F, Wu B, Mei L, Lenarcic EM, Feng EH, Song J, Xiong Y, Yu X, Wang C, Jain K, Strahl BD, Cook JG, et al. Non-canonical function of histone methyltransferase G9a in the translational regulation of chronic inflammation. Cell Chemical Biology. PMID 37858336 DOI: 10.1016/j.chembiol.2023.09.012 |
0.778 |
|
| 2023 |
Khan A, Metts JM, Collins LC, Mills CA, Li K, Brademeyer AL, Bowman BM, Major MB, Aubé J, Herring LE, Davis IJ, Strahl BD. SETD2 maintains nuclear lamina stability to safeguard the genome. Biorxiv : the Preprint Server For Biology. PMID 37808753 DOI: 10.1101/2023.09.28.560032 |
0.4 |
|
| 2023 |
Petell CJ, Burkholder NT, Ruiz PA, Skela J, Foreman JR, Southwell LE, Temple BR, Krajewski K, Strahl BD. The bromo-adjacent homology (BAH) domains of PBRM1 associate with histone tails and contribute to PBAF-mediated gene regulation. The Journal of Biological Chemistry. 104996. PMID 37394010 DOI: 10.1016/j.jbc.2023.104996 |
0.565 |
|
| 2023 |
Jain K, Marunde MR, Burg JM, Gloor SL, Joseph FM, Poncha KF, Gillespie ZB, Rodriguez KL, Popova IK, Hall NW, Vaidya A, Howard SA, Taylor HF, Mukhsinova L, Onuoha UC, ... ... Strahl BD, et al. An acetylation-mediated chromatin switch governs H3K4 methylation read-write capability. Elife. 12. PMID 37204295 DOI: 10.7554/eLife.82596 |
0.847 |
|
| 2023 |
Jain K, Strahl BD. In Memoriam C. David Allis: Chromatin unlocked. Nature Reviews. Molecular Cell Biology. PMID 36949114 DOI: 10.1038/s41580-023-00601-2 |
0.784 |
|
| 2023 |
Bernstein E, Dent S, Dou Y, Duncan EM, Hake SB, Strahl BD, Wysocka J. C. David Allis (1951-2023). Molecular Cell. 83: 497-499. PMID 36805122 DOI: 10.1016/j.molcel.2023.02.002 |
0.73 |
|
| 2023 |
Bernstein E, Dent S, Dou Y, Duncan EM, Hake SB, Strahl BD, Wysocka J. C. David Allis (1951-2023). Cell. 186: 663-667. PMID 36803594 DOI: 10.1016/j.cell.2023.01.031 |
0.73 |
|
| 2022 |
Nguyen MC, Strahl BD, Kutateladze TG. Engaging with benzoyllysine through a π-π-π mechanism. Current Opinion in Chemical Biology. 72: 102252. PMID 36566617 DOI: 10.1016/j.cbpa.2022.102252 |
0.481 |
|
| 2022 |
Liu X, Wang J, Boyer JA, Gong W, Zhao S, Xie L, Wu Q, Zhang C, Jain K, Guo Y, Rodriguez J, Li M, Uryu H, Liao C, Hu L, ... ... Strahl BD, et al. Histone H3 proline 16 hydroxylation regulates mammalian gene expression. Nature Genetics. PMID 36347944 DOI: 10.1038/s41588-022-01212-x |
0.871 |
|
| 2022 |
Klein BJ, Feigerle JT, Zhang J, Ebmeier CC, Fan L, Singh RK, Wang WW, Schmitt LR, Lee T, Hansen KC, Liu WR, Wang YX, Strahl BD, Anthony Weil P, Kutateladze TG. Taf2 mediates DNA binding of Taf14. Nature Communications. 13: 3177. PMID 35676274 DOI: 10.1038/s41467-022-30937-w |
0.358 |
|
| 2022 |
Niedzialkowska E, Liu L, Kuscu C, Mayo Z, Minor W, Strahl BD, Adli M, Stukenberg PT. Tip60 acetylation of histone H3K4 temporally controls Chromosome Passenger Complex localization. Molecular Biology of the Cell. mbcE21060283. PMID 35653296 DOI: 10.1091/mbc.E21-06-0283 |
0.38 |
|
| 2022 |
Crain AT, Klusza S, Armstrong RL, Santa Rosa P, Temple BRS, Strahl BD, McKay DJ, Matera AG, Duronio RJ. Distinct developmental phenotypes result from mutation of Set8/KMT5A and histone H4 lysine 20 in Drosophila melanogaster. Genetics. PMID 35404465 DOI: 10.1093/genetics/iyac054 |
0.344 |
|
| 2021 |
Zhang J, Gundu A, Strahl BD. Recognition of acetylated histone by Yaf9 regulates metabolic cycling of transcription initiation and chromatin regulatory factors. Genes & Development. 35: 1678-1692. PMID 34819351 DOI: 10.1101/gad.348904.121 |
0.439 |
|
| 2021 |
Enríquez P, Krajewski K, Strahl BD, Rothbart SB, Dowen RH, Rose RB. Binding specificity and function of the SWI/SNF subunit SMARCA4 bromodomain interaction with acetylated histone H3K14. The Journal of Biological Chemistry. 101145. PMID 34473995 DOI: 10.1016/j.jbc.2021.101145 |
0.778 |
|
| 2021 |
Ren W, Fan H, Grimm SA, Kim JJ, Li L, Guo Y, Petell CJ, Tan XF, Zhang ZM, Coan JP, Yin J, Kim DI, Gao L, Cai L, Khudaverdyan N, ... ... Strahl BD, et al. DNMT1 reads heterochromatic H4K20me3 to reinforce LINE-1 DNA methylation. Nature Communications. 12: 2490. PMID 33941775 DOI: 10.1038/s41467-021-22665-4 |
0.783 |
|
| 2021 |
Jain K, Strahl BD. Oncohistones: corruption at the core. Nature Chemical Biology. PMID 33649603 DOI: 10.1038/s41589-021-00764-z |
0.749 |
|
| 2021 |
Slaughter MJ, Shanle EK, Khan A, Chua KF, Hong T, Boxer LD, Allis CD, Josefowicz SZ, Garcia BA, Rothbart SB, Strahl BD, Davis IJ. HDAC inhibition results in widespread alteration of the histone acetylation landscape and BRD4 targeting to gene bodies. Cell Reports. 34: 108638. PMID 33472068 DOI: 10.1016/j.celrep.2020.108638 |
0.867 |
|
| 2020 |
Fan H, Lu J, Guo Y, Li D, Zhang ZM, Tsai YH, Pi WC, Ahn JH, Gong W, Xiang Y, Allison DF, Geng H, He S, Diao Y, Chen WY, ... Strahl BD, et al. BAHCC1 binds H3K27me3 via a conserved BAH module to mediate gene silencing and oncogenesis. Nature Genetics. PMID 33139953 DOI: 10.1038/s41588-020-00729-3 |
0.771 |
|
| 2020 |
Tencer AH, Cox KL, Wright GM, Zhang Y, Petell CJ, Klein BJ, Strahl BD, Black JC, Poirier MG, Kutateladze TG. Molecular mechanism of the MORC4 ATPase activation. Nature Communications. 11: 5466. PMID 33122719 DOI: 10.1038/s41467-020-19278-8 |
0.357 |
|
| 2020 |
Vaughan RM, Kupai A, Foley CA, Sagum CA, Tibben BM, Eden HE, Tiedemann RL, Berryhill CA, Patel V, Shaw KM, Krajewski K, Strahl BD, Bedford MT, Frye SV, Dickson BM, et al. The histone and non-histone methyllysine reader activities of the UHRF1 tandem Tudor domain are dispensable for the propagation of aberrant DNA methylation patterning in cancer cells. Epigenetics & Chromatin. 13: 44. PMID 33097091 DOI: 10.1186/s13072-020-00366-4 |
0.758 |
|
| 2020 |
Lerner AM, Hepperla AJ, Keele GR, Meriesh HA, Yumerefendi H, Restrepo D, Zimmerman S, Bear JE, Kuhlman B, Davis IJ, Strahl BD. An optogenetic switch for the Set2 methyltransferase provides evidence for transcription-dependent and -independent dynamics of H3K36 methylation. Genome Research. PMID 33020206 DOI: 10.1101/gr.264283.120 |
0.497 |
|
| 2020 |
Ren W, Fan H, Grimm SA, Guo Y, Kim JJ, Yin J, Li L, Petell CJ, Tan XF, Zhang ZM, Coan JP, Gao L, Cai L, Detrick B, Çetin B, ... ... Strahl BD, et al. Direct readout of heterochromatic H3K9me3 regulates DNMT1-mediated maintenance DNA methylation. Proceedings of the National Academy of Sciences of the United States of America. PMID 32675241 DOI: 10.1073/Pnas.2009316117 |
0.809 |
|
| 2020 |
Strahl BD, Briggs SD. The SAGA continues: The rise of cis- and trans-histone crosstalk pathways. Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms. 194600. PMID 32645359 DOI: 10.1016/J.Bbagrm.2020.194600 |
0.619 |
|
| 2020 |
DiFiore JV, Ptacek TS, Wang Y, Li B, Simon JM, Strahl BD. Unique and Shared Roles for Histone H3K36 Methylation States in Transcription Regulation Functions. Cell Reports. 31: 107751. PMID 32521276 DOI: 10.1016/J.Celrep.2020.107751 |
0.619 |
|
| 2020 |
Turner AM, Dronamraju R, Potjewyd FM, Sholtis K, Winecoff D, Kirchherr J, Archin N, Browne E, Strahl BD, Margolis D, James LI. Evaluation of EED Inhibitors as a Class of PRC2-Targeted Small Molecules for HIV Latency Reversal. Acs Infectious Diseases. PMID 32347704 DOI: 10.1021/Acsinfecdis.9B00514 |
0.361 |
|
| 2020 |
Meriesh HA, Lerner AM, Chandrasekharan MB, Strahl BD. The histone H4 basic patch regulates SAGA-mediated H2B deubiquitylation and histone acetylation. The Journal of Biological Chemistry. PMID 32245891 DOI: 10.1074/Jbc.Ra120.013196 |
0.588 |
|
| 2020 |
Jain K, Fraser CS, Marunde MR, Parker MM, Sagum C, Burg JM, Hall N, Popova IK, Rodriguez KL, Vaidya A, Krajewski K, Keogh MC, Bedford MT, Strahl BD. Characterization of the plant homeodomain (PHD) reader family for their histone tail interactions. Epigenetics & Chromatin. 13: 3. PMID 31980037 DOI: 10.1186/S13072-020-0328-Z |
0.862 |
|
| 2019 |
Gowans GJ, Bridgers JB, Zhang J, Dronamraju R, Burnetti A, King DA, Thiengmany AV, Shinsky SA, Bhanu NV, Garcia BA, Buchler NE, Strahl BD, Morrison AJ. Recognition of Histone Crotonylation by Taf14 Links Metabolic State to Gene Expression. Molecular Cell. PMID 31676231 DOI: 10.1016/J.Molcel.2019.09.029 |
0.824 |
|
| 2019 |
Albanese KI, Krone MW, Petell CJ, Parker MM, Strahl BD, Brustad EM, Waters ML. Engineered Reader Proteins for Enhanced Detection of Methylated Lysine on Histones. Acs Chemical Biology. PMID 31634430 DOI: 10.1021/Acschembio.9B00651 |
0.541 |
|
| 2019 |
Klein BJ, Jang SM, Lachance C, Mi W, Lyu J, Sakuraba S, Krajewski K, Wang WW, Sidoli S, Liu J, Zhang Y, Wang X, Warfield BM, Kueh AJ, Voss AK, ... ... Strahl BD, et al. Histone H3K23-specific acetylation by MORF is coupled to H3K14 acylation. Nature Communications. 10: 4724. PMID 31624313 DOI: 10.1038/S41467-019-12551-5 |
0.631 |
|
| 2019 |
Li TM, Coan JP, Krajewski K, Zhang L, Elias JE, Strahl BD, Gozani O, Chua KF. Binding to medium and long chain fatty acyls is a common property of HEAT and ARM repeat modules. Scientific Reports. 9: 14226. PMID 31578417 DOI: 10.1038/S41598-019-50817-6 |
0.344 |
|
| 2019 |
Zhang Y, Jang Y, Lee JE, Ahn J, Xu L, Holden MR, Cornett EM, Krajewski K, Klein BJ, Wang SP, Dou Y, Roeder RG, Strahl BD, Rothbart SB, Shi X, et al. Selective binding of the PHD6 finger of MLL4 to histone H4K16ac links MLL4 and MOF. Nature Communications. 10: 2314. PMID 31127101 DOI: 10.1038/S41467-019-10324-8 |
0.787 |
|
| 2019 |
Petell CJ, Pham AT, Skela J, Strahl BD. Improved methods for the detection of histone interactions with peptide microarrays. Scientific Reports. 9: 6265. PMID 31000785 DOI: 10.1038/S41598-019-42711-Y |
0.552 |
|
| 2019 |
Armstrong RL, Penke TJR, Chao SK, Gentile GM, Strahl BD, Matera AG, McKay DJ, Duronio RJ. H3K9 Promotes Under-Replication of Pericentromeric Heterochromatin in Drosophila Salivary Gland Polytene Chromosomes. Genes. 10. PMID 30700014 DOI: 10.3390/Genes10020093 |
0.516 |
|
| 2019 |
Leatham-Jensen M, Uyehara CM, Strahl BD, Matera AG, Duronio RJ, McKay DJ. Lysine 27 of replication-independent histone H3.3 is required for Polycomb target gene silencing but not for gene activation. Plos Genetics. 15: e1007932. PMID 30699116 DOI: 10.1371/Journal.Pgen.1007932 |
0.541 |
|
| 2018 |
Dronamraju R, Kerschner JL, Peck SA, Hepperla AJ, Adams AT, Hughes KD, Aslam S, Yoblinski AR, Davis IJ, Mosley AL, Strahl BD. Casein Kinase II Phosphorylation of Spt6 Enforces Transcriptional Fidelity by Maintaining Spn1-Spt6 Interaction. Cell Reports. 25: 3476-3489.e5. PMID 30566871 DOI: 10.1016/J.Celrep.2018.11.089 |
0.54 |
|
| 2018 |
Suh JL, Watts B, Stuckey JI, Norris-Drouin JL, Cholensky SH, Dickson BM, An Y, Mathea S, Salah E, Knapp S, Khan A, Adams AT, Strahl BD, Sagum CA, Bedford MT, et al. Correction to "Quantitative Characterization of Bivalent Probes for a Dual Bromodomain Protein, Transcription Initiation Factor TFIID subunit 1". Biochemistry. PMID 30485080 DOI: 10.1021/Acs.Biochem.8B01187 |
0.354 |
|
| 2018 |
Lerner A, Yumerefendi H, Goudy O, Strahl BD, Kuhlman B. Engineering Improved Photoswitches for the Control of Nucleocytoplasmic Distribution. Acs Synthetic Biology. PMID 30441907 DOI: 10.1021/Acssynbio.8B00368 |
0.358 |
|
| 2018 |
Klein BJ, Vann KR, Andrews FH, Wang WW, Zhang J, Zhang Y, Beloglazkina AA, Mi W, Li Y, Li H, Shi X, Kutateladze AG, Strahl BD, Liu WR, Kutateladze TG. Structural insights into the π-π-π stacking mechanism and DNA-binding activity of the YEATS domain. Nature Communications. 9: 4574. PMID 30385749 DOI: 10.1038/s41467-018-07072-6 |
0.339 |
|
| 2018 |
Armstrong RL, Penke TJR, Strahl BD, Matera AG, McKay DJ, MacAlpine DM, Duronio RJ. Chromatin conformation and transcriptional activity are permissive regulators of DNA replication initiation in Drosophila. Genome Research. PMID 30279224 DOI: 10.1101/Gr.239913.118 |
0.47 |
|
| 2018 |
Klein BJ, Krajewski K, Restrepo S, Lewis PW, Strahl BD, Kutateladze TG. Recognition of cancer mutations in histone H3K36 by epigenetic writers and readers. Epigenetics. PMID 30045670 DOI: 10.1080/15592294.2018.1503491 |
0.758 |
|
| 2018 |
Slaughter MJ, Shanle EK, McFadden AW, Hollis ES, Suttle LE, Strahl BD, Davis IJ. Polybromo-1 (PBRM1) bromodomains variably influence nucleosome interactions and cellular function. The Journal of Biological Chemistry. PMID 29986887 DOI: 10.1074/Jbc.Ra118.003381 |
0.812 |
|
| 2018 |
Dronamraju R, Hepperla AJ, Shibata Y, Adams AT, Magnuson T, Davis IJ, Strahl BD. Spt6 Association with RNA Polymerase II Directs mRNA Turnover During Transcription. Molecular Cell. 70: 1054-1066.e4. PMID 29932900 DOI: 10.1016/J.Molcel.2018.05.020 |
0.49 |
|
| 2018 |
Chiang YC, Park IY, Terzo EA, Tripathi DN, Mason FM, Fahey CC, Karki M, Shuster CB, Sohn BH, Chowdhury P, Powell RT, Ohi R, Tsai YH, de Cubas AA, Khan A, ... ... Strahl BD, et al. SETD2 Haploinsufficiency for Microtubule Methylation is an Early Driver of Genomic Instability in Renal Cell Carcinoma. Cancer Research. PMID 29724720 DOI: 10.1158/0008-5472.Can-17-3460 |
0.41 |
|
| 2018 |
Suh JL, Watts B, Stuckey JI, Norris-Drouin JL, Cholensky SH, Dickson BM, An Y, Mathea S, Salah E, Knapp S, Khan A, Adams AT, Strahl BD, Sagum CA, Bedford MT, et al. Quantitative characterization of bivalent probes for a dual bromodomain protein, Transcription Initiation Factor TFIID subunit 1, TAF1. Biochemistry. PMID 29558110 DOI: 10.1021/Acs.Biochem.8B00150 |
0.315 |
|
| 2018 |
Meers MP, Adelman K, Duronio RJ, Strahl BD, McKay DJ, Matera AG. Transcription start site profiling uncovers divergent transcription and enhancer-associated RNAs in Drosophila melanogaster. Bmc Genomics. 19: 157. PMID 29466941 DOI: 10.1186/S12864-018-4510-7 |
0.384 |
|
| 2018 |
Klein BJ, Vann KR, Andrews FH, Wang WW, Zhang J, Zhang Y, Beloglazkina AA, Mi W, Li Y, Li H, Shi X, Kutateladze AG, Strahl BD, Liu WR, Kutateladze TG. Structural insights into the pi-pi-pi stacking mechanism and DNA-binding activity of the YEATS domain. Nature Communications. 9: 4574-4574. DOI: 10.2210/Pdb6Mip/Pdb |
0.459 |
|
| 2017 |
Dronamraju R, Jha DK, Eser U, Adams AT, Dominguez D, Choudhury R, Chiang YC, Rathmell WK, Emanuele MJ, Churchman LS, Strahl BD. Set2 methyltransferase facilitates cell cycle progression by maintaining transcriptional fidelity. Nucleic Acids Research. PMID 29294086 DOI: 10.1093/Nar/Gkx1276 |
0.714 |
|
| 2017 |
Veland N, Hardikar S, Zhong Y, Gayatri S, Dan J, Strahl BD, Rothbart SB, Bedford MT, Chen T. The Arginine Methyltransferase PRMT6 Regulates DNA Methylation and Contributes to Global DNA Hypomethylation in Cancer. Cell Reports. 21: 3390-3397. PMID 29262320 DOI: 10.1016/J.Celrep.2017.11.082 |
0.746 |
|
| 2017 |
Klein BJ, Ahmad S, Vann KR, Andrews FH, Mayo ZA, Bourriquen G, Bridgers JB, Zhang J, Strahl BD, Côté J, Kutateladze TG. Yaf9 subunit of the NuA4 and SWR1 complexes targets histone H3K27ac through its YEATS domain. Nucleic Acids Research. PMID 29145630 DOI: 10.1093/Nar/Gkx1151 |
0.849 |
|
| 2017 |
Penke TJR, McKay DJ, Strahl BD, Matera AG, Duronio RJ. Functional Redundancy of Variant and Canonical Histone H3 Lysine 9 Modification in Drosophila. Genetics. PMID 29133298 DOI: 10.1534/Genetics.117.300480 |
0.531 |
|
| 2017 |
Tencer AH, Cox KL, Di L, Bridgers JB, Lyu J, Wang X, Sims JK, Weaver TM, Allen HF, Zhang Y, Gatchalian J, Darcy MA, Gibson MD, Ikebe J, Li W, ... ... Strahl BD, et al. Covalent Modifications of Histone H3K9 Promote Binding of CHD3. Cell Reports. 21: 455-466. PMID 29020631 DOI: 10.1016/J.Celrep.2017.09.054 |
0.876 |
|
| 2017 |
Tencer AH, Gatchalian J, Klein BJ, Khan A, Zhang Y, Strahl BD, van Wely KHM, Kutateladze TG. A Unique pH-Dependent Recognition of Methylated Histone H3K4 by PPS and DIDO. Structure (London, England : 1993). PMID 28919441 DOI: 10.1016/J.Str.2017.08.009 |
0.397 |
|
| 2017 |
Dronamraju R, Ramachandran S, Jha DK, Adams AT, DiFiore JV, Parra MA, Dokholyan NV, Strahl BD. Redundant Functions for Nap1 and Chz1 in H2A.Z Deposition. Scientific Reports. 7: 10791. PMID 28883625 DOI: 10.1038/S41598-017-11003-8 |
0.797 |
|
| 2017 |
McDaniel SL, Hepperla AJ, Huang J, Dronamraju R, Adams AT, Kulkarni VG, Davis IJ, Strahl BD. H3K36 Methylation Regulates Nutrient Stress Response in Saccharomyces cerevisiae by Enforcing Transcriptional Fidelity. Cell Reports. 19: 2371-2382. PMID 28614721 DOI: 10.1016/J.Celrep.2017.05.057 |
0.83 |
|
| 2017 |
McDaniel SL, Strahl BD. Shaping the cellular landscape with Set2/SETD2 methylation. Cellular and Molecular Life Sciences : Cmls. PMID 28386724 DOI: 10.1007/S00018-017-2517-X |
0.846 |
|
| 2017 |
Khan A, Bridgers JB, Strahl BD. Expanding the Reader Landscape of Histone Acylation. Structure (London, England : 1993). 25: 571-573. PMID 28380336 DOI: 10.1016/J.Str.2017.03.010 |
0.829 |
|
| 2017 |
Meers MP, Henriques T, Lavender CA, McKay DJ, Strahl BD, Duronio RJ, Adelman K, Matera AG. Histone gene replacement reveals a post-transcriptional role for H3K36 in maintaining metazoan transcriptome fidelity. Elife. 6. PMID 28346137 DOI: 10.7554/Elife.23249 |
0.579 |
|
| 2017 |
Shanle EK, Shinsky SA, Bridgers JB, Bae N, Sagum C, Krajewski K, Rothbart SB, Bedford MT, Strahl BD. Histone peptide microarray screen of chromo and Tudor domains defines new histone lysine methylation interactions. Epigenetics & Chromatin. 10: 12. PMID 28293301 DOI: 10.1186/S13072-017-0117-5 |
0.851 |
|
| 2017 |
Meers MP, Henriques T, Lavender CA, McKay DJ, Strahl BD, Duronio RJ, Adelman K, Matera AG. Author response: Histone gene replacement reveals a post-transcriptional role for H3K36 in maintaining metazoan transcriptome fidelity Elife. DOI: 10.7554/Elife.23249.063 |
0.554 |
|
| 2016 |
Savitsky P, Krojer T, Fujisawa T, Lambert JP, Picaud S, Wang CY, Shanle EK, Krajewski K, Friedrichsen H, Kanapin A, Goding C, Schapira M, Samsonova A, Strahl BD, Gingras AC, et al. Multivalent Histone and DNA Engagement by a PHD/BRD/PWWP Triple Reader Cassette Recruits ZMYND8 to K14ac-Rich Chromatin. Cell Reports. 17: 2724-2737. PMID 27926874 DOI: 10.1016/J.Celrep.2016.11.014 |
0.827 |
|
| 2016 |
Strikoudis A, Lazaris C, Trimarchi T, Galvao Neto AL, Yang Y, Ntziachristos P, Rothbart S, Buckley S, Dolgalev I, Stadtfeld M, Strahl BD, Dynlacht BD, Tsirigos A, Aifantis I. Regulation of transcriptional elongation in pluripotency and cell differentiation by the PHD-finger protein Phf5a. Nature Cell Biology. PMID 27749823 DOI: 10.1038/Ncb3424 |
0.679 |
|
| 2016 |
Andrews FH, Tong Q, Sullivan KD, Cornett EM, Zhang Y, Ali M, Ahn J, Pandey A, Guo AH, Strahl BD, Costello JC, Espinosa JM, Rothbart SB, Kutateladze TG. Multivalent Chromatin Engagement and Inter-domain Crosstalk Regulate MORC3 ATPase. Cell Reports. 16: 3195-207. PMID 27653685 DOI: 10.1016/J.Celrep.2016.08.050 |
0.741 |
|
| 2016 |
Harrison JS, Cornett EM, Goldfarb D, DaRosa PA, Li ZM, Yan F, Dickson BM, Guo AH, Cantu DV, Kaustov L, Brown PJ, Arrowsmith CH, Erie DA, Major MB, Klevit RE, ... ... Strahl BD, et al. Hemi-methylated DNA regulates DNA methylation inheritance through allosteric activation of H3 ubiquitylation by UHRF1. Elife. 5. PMID 27595565 DOI: 10.7554/Elife.17101 |
0.772 |
|
| 2016 |
Penke TJ, McKay DJ, Strahl BD, Matera AG, Duronio RJ. Direct interrogation of the role of H3K9 in metazoan heterochromatin function. Genes & Development. PMID 27566777 DOI: 10.1101/Gad.286278.116 |
0.564 |
|
| 2016 |
Chen H, Workman JJ, Strahl BD, Laribee RN. Histone H3 and TORC1 prevent organelle dysfunction and cell death by promoting nuclear retention of HMGB proteins. Epigenetics & Chromatin. 9: 34. PMID 27540414 DOI: 10.1186/S13072-016-0083-3 |
0.831 |
|
| 2016 |
Andrews FH, Strahl BD, Kutateladze TG. Insights into newly discovered marks and readers of epigenetic information. Nature Chemical Biology. 12: 662-8. PMID 27538025 DOI: 10.1038/Nchembio.2149 |
0.507 |
|
| 2016 |
Hacker KE, Fahey CC, Shinsky SA, Chiang YJ, DiFiore JV, Jha DK, Vo AH, Shavit JA, Davis IJ, Strahl BD, Rathmell WK. Structure/Function Analysis of Recurrent Mutations in SETD2 Reveals a Critical and Conserved Role for a SET Domain Residue in Maintaining Protein Stability and H3K36 Trimethylation. The Journal of Biological Chemistry. PMID 27528607 DOI: 10.1074/Jbc.M116.739375 |
0.681 |
|
| 2016 |
Cornett EM, Dickson BM, Vaughan RM, Krishnan S, Trievel RC, Strahl BD, Rothbart SB. Substrate Specificity Profiling of Histone-Modifying Enzymes by Peptide Microarray. Methods in Enzymology. 574: 31-52. PMID 27423856 DOI: 10.1016/Bs.Mie.2016.01.008 |
0.588 |
|
| 2016 |
McDaniel SL, Fligor JE, Chun R, Cui H, Bridgers JB, DiFiore JV, Guo AH, Li B, Strahl BD. Combinatorial Histone Readout by the Dual Plant Homeodomains (PHD) of Rco1 Mediates Rpd3S Chromatin Recruitment and the Maintenance of Transcriptional Fidelity. The Journal of Biological Chemistry. PMID 27226578 DOI: 10.1074/Jbc.M116.720193 |
0.879 |
|
| 2016 |
Bedard LG, Dronamraju R, Kerschner JL, Hunter GO, Axley ED, Boyd AK, Strahl BD, Mosley AL. Quantitative analysis of dynamic protein interactions during transcription reveals a role for casein kinase II in PAF complex phosphorylation and regulation of H2B monoubiquitylation. The Journal of Biological Chemistry. PMID 27143358 DOI: 10.1074/Jbc.M116.727735 |
0.409 |
|
| 2016 |
Yumerefendi H, Lerner AM, Zimmerman SP, Hahn K, Bear JE, Strahl BD, Kuhlman B. Light-induced nuclear export reveals rapid dynamics of epigenetic modifications. Nature Chemical Biology. PMID 27089030 DOI: 10.1038/Nchembio.2068 |
0.521 |
|
| 2016 |
Andrews FH, Shinsky SA, Shanle EK, Bridgers JB, Gest A, Tsun IK, Krajewski K, Shi X, Strahl BD, Kutateladze TG. The Taf14 YEATS domain is a reader of histone crotonylation. Nature Chemical Biology. PMID 27089029 DOI: 10.1038/Nchembio.2065 |
0.855 |
|
| 2016 |
Gatchalian J, Gallardo CM, Shinsky SA, Ospina RR, Liendo AM, Krajewski K, Klein BJ, Andrews FH, Strahl BD, M van Wely KH, Kutateladze TG. Chromatin condensation and recruitment of PHD finger proteins to histone H3K4me3 are mutually exclusive. Nucleic Acids Research. PMID 27016734 DOI: 10.1093/Nar/Gkw193 |
0.535 |
|
| 2016 |
Andrews FH, Shanle EK, Strahl BD, Kutateladze TG. The essential role of acetyllysine binding by the YEATS domain in transcriptional regulation. Transcription. 7: 14-20. PMID 26934307 DOI: 10.1080/21541264.2015.1125987 |
0.797 |
|
| 2016 |
Hattori T, Lai D, Dementieva IS, Montaño SP, Kurosawa K, Zheng Y, Akin LR, Świst-Rosowska KM, Grzybowski AT, Koide A, Krajewski K, Strahl BD, Kelleher NL, Ruthenburg AJ, Koide S. Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation. Proceedings of the National Academy of Sciences of the United States of America. PMID 26862167 DOI: 10.1073/Pnas.1522691113 |
0.724 |
|
| 2016 |
Sorenson MR, Jha DK, Ucles SA, Flood DM, Strahl BD, Stevens SW, Kress TL. Histone H3K36 methylation regulates pre-mRNA splicing in Saccharomyces cerevisiae. Rna Biology. 0. PMID 26821844 DOI: 10.1080/15476286.2016.1144009 |
0.724 |
|
| 2016 |
Andrews FH, Gatchalian J, Krajewski K, Strahl BD, Kutateladze TG. Regulation of Methyllysine Readers through Phosphorylation. Acs Chemical Biology. PMID 26726824 DOI: 10.1021/Acschembio.5B00802 |
0.639 |
|
| 2016 |
Shanle EK, Tsun IK, Strahl BD. A course-based undergraduate research experience investigating p300 bromodomain mutations. Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology. 44: 68-74. PMID 26537758 DOI: 10.1002/Bmb.20927 |
0.723 |
|
| 2016 |
Harrison JS, Cornett EM, Goldfarb D, DaRosa PA, Li ZM, Yan F, Dickson BM, Guo AH, Cantu DV, Kaustov L, Brown PJ, Arrowsmith CH, Erie DA, Major MB, Klevit RE, ... ... Strahl BD, et al. Author response: Hemi-methylated DNA regulates DNA methylation inheritance through allosteric activation of H3 ubiquitylation by UHRF1 Elife. DOI: 10.7554/Elife.17101.024 |
0.446 |
|
| 2016 |
Zhang Z, Rothbart SB, Allison DF, Harrison JS, Wang Y, Strahl BD, Wang GG, Song J. Allosteric Regulation of UHRF1 for DNA Methylation Maintenance Biophysical Journal. 110: 513a. DOI: 10.1016/J.Bpj.2015.11.2742 |
0.854 |
|
| 2016 |
Cornett EM, Dickson BM, Vaughan RM, Krishnan S, Trievel RC, Strahl BD, Rothbart SB. Substrate Specificity Profiling of Histone-Modifying Enzymes by Peptide Microarray Methods in Enzymology. DOI: 10.1016/bs.mie.2016.01.008 |
0.668 |
|
| 2015 |
Cliffe AR, Arbuckle JH, Vogel JL, Geden MJ, Rothbart SB, Cusack CL, Strahl BD, Kristie TM, Deshmukh M. Neuronal Stress Pathway Mediating a Histone Methyl/Phospho Switch Is Required for Herpes Simplex Virus Reactivation. Cell Host & Microbe. 18: 649-58. PMID 26651941 DOI: 10.1016/J.Chom.2015.11.007 |
0.707 |
|
| 2015 |
Chen S, Yang Z, Wilkinson AW, Deshpande AJ, Sidoli S, Krajewski K, Strahl BD, Garcia BA, Armstrong SA, Patel DJ, Gozani O. The PZP Domain of AF10 Senses Unmodified H3K27 to Regulate DOT1L-Mediated Methylation of H3K79. Molecular Cell. PMID 26439302 DOI: 10.1016/J.Molcel.2015.08.019 |
0.492 |
|
| 2015 |
Shanle EK, Andrews FH, Meriesh H, McDaniel SL, Dronamraju R, DiFiore JV, Jha D, Wozniak GG, Bridgers JB, Kerschner JL, Krajewski K, Martín GM, Morrison AJ, Kutateladze TG, Strahl BD. Association of Taf14 with acetylated histone H3 directs gene transcription and the DNA damage response. Genes & Development. 29: 1795-800. PMID 26341557 DOI: 10.1101/Gad.269977.115 |
0.852 |
|
| 2015 |
Simon JM, Parker JS, Liu F, Rothbart SB, Ait-Si-Ali S, Strahl BD, Jin J, Davis IJ, Mosley AL, Pattenden SG. A Role for Widely Interspaced Zinc Finger (WIZ) in Retention of the G9a Methyltransferase on Chromatin. The Journal of Biological Chemistry. 290: 26088-102. PMID 26338712 DOI: 10.1074/Jbc.M115.654459 |
0.731 |
|
| 2015 |
Zhang ZM, Rothbart SB, Allison DF, Cai Q, Harrison JS, Li L, Wang Y, Strahl BD, Wang GG, Song J. An Allosteric Interaction Links USP7 to Deubiquitination and Chromatin Targeting of UHRF1. Cell Reports. 12: 1400-6. PMID 26299963 DOI: 10.1016/J.Celrep.2015.07.046 |
0.835 |
|
| 2015 |
Ali M, Daze KD, Strongin DE, Rothbart SB, Rincon-Arano H, Allen HF, Li J, Strahl BD, Hof F, Kutateladze TG. Molecular insight into inhibition of the methylated histone-plant homeodomain complexes by calixarenes. The Journal of Biological Chemistry. PMID 26229108 DOI: 10.1074/Jbc.M115.669333 |
0.807 |
|
| 2015 |
Rothbart SB, Dickson BM, Raab JR, Grzybowski AT, Krajewski K, Guo AH, Shanle EK, Josefowicz SZ, Fuchs SM, Allis CD, Magnuson TR, Ruthenburg AJ, Strahl BD. An Interactive Database for the Assessment of Histone Antibody Specificity. Molecular Cell. 59: 502-11. PMID 26212453 DOI: 10.1016/J.Molcel.2015.06.022 |
0.81 |
|
| 2015 |
Wang L, Xie L, Ramachandran S, Lee Y, Yan Z, Zhou L, Krajewski K, Liu F, Zhu C, Chen DJ, Strahl BD, Jin J, Dokholyan NV, Chen X. Non-canonical Bromodomain within DNA-PKcs Promotes DNA Damage Response and Radioresistance through Recognizing an IR-Induced Acetyl-Lysine on H2AX. Chemistry & Biology. PMID 26119999 DOI: 10.1016/J.Chembiol.2015.05.014 |
0.345 |
|
| 2015 |
Rothbart SB, Dickson BM, Strahl BD. From histones to ribosomes: a chromatin regulator tangoes with translation. Cancer Discovery. 5: 228-30. PMID 25749972 DOI: 10.1158/2159-8290.Cd-15-0073 |
0.8 |
|
| 2015 |
McKay DJ, Klusza S, Penke TJ, Meers MP, Curry KP, McDaniel SL, Malek PY, Cooper SW, Tatomer DC, Lieb JD, Strahl BD, Duronio RJ, Matera AG. Interrogating the function of metazoan histones using engineered gene clusters. Developmental Cell. 32: 373-86. PMID 25669886 DOI: 10.1016/J.Devcel.2014.12.025 |
0.861 |
|
| 2015 |
Jha DK, Strahl BD. Erratum: An RNA polymerase II-coupled function for histone H3K36 methylation in checkpoint activation and DSB repair. Nature Communications. 6: 6015. PMID 25655584 DOI: 10.1038/Ncomms7015 |
0.687 |
|
| 2015 |
Tong Q, Mazur SJ, Rincon-Arano H, Rothbart SB, Kuznetsov DM, Cui G, Liu WH, Gete Y, Klein BJ, Jenkins L, Mer G, Kutateladze AG, Strahl BD, Groudine M, Appella E, et al. An acetyl-methyl switch drives a conformational change in p53. Structure (London, England : 1993). 23: 322-31. PMID 25651062 DOI: 10.1016/J.Str.2014.12.010 |
0.675 |
|
| 2015 |
Perfetti MT, Baughman BM, Dickson BM, Mu Y, Cui G, Mader P, Dong A, Norris JL, Rothbart SB, Strahl BD, Brown PJ, Janzen WP, Arrowsmith CH, Mer G, McBride KM, et al. Identification of a fragment-like small molecule ligand for the methyl-lysine binding protein, 53BP1. Acs Chemical Biology. 10: 1072-81. PMID 25590533 DOI: 10.1021/Cb500956G |
0.749 |
|
| 2015 |
Tong Q, Cui G, Botuyan MV, Rothbart SB, Hayashi R, Musselman CA, Singh N, Appella E, Strahl BD, Mer G, Kutateladze TG. Structural plasticity of methyllysine recognition by the tandem tudor domain of 53BP1. Structure (London, England : 1993). 23: 312-21. PMID 25579814 DOI: 10.1016/J.Str.2014.11.013 |
0.7 |
|
| 2015 |
Dumesic PA, Homer CM, Moresco JJ, Pack LR, Shanle EK, Coyle SM, Strahl BD, Fujimori DG, Yates JR, Madhani HD. Product binding enforces the genomic specificity of a yeast polycomb repressive complex. Cell. 160: 204-18. PMID 25533783 DOI: 10.1016/J.Cell.2014.11.039 |
0.831 |
|
| 2015 |
James LI, Stuckey JI, Baughman BM, Perfetti MT, Pattenden SG, Dickson BM, Norris JL, Cui G, Mader P, Dong A, Mu Y, Rothbart SB, Strahl BD, Min J, Brown PJ, et al. Abstract SY08-03: Targeting chromatin regulation for cancer therapy: progress towards chemical probes for methyl-lysine readers Cancer Research. 75. DOI: 10.1158/1538-7445.Am2015-Sy08-03 |
0.466 |
|
| 2015 |
Rothbart SB, Dickson BM, Raab JR, Grzybowski AT, Krajewski K, Guo AH, Shanle EK, Josefowicz SZ, Fuchs SM, Allis CD, Magnuson TR, Ruthenburg AJ, Strahl BD. An Interactive Database for the Assessment of Histone Antibody Specificity Molecular Cell. 59: 502-511. DOI: 10.1016/j.molcel.2015.06.022 |
0.811 |
|
| 2014 |
Gilbert TM, McDaniel SL, Byrum SD, Cades JA, Dancy BC, Wade H, Tackett AJ, Strahl BD, Taverna SD. A PWWP domain-containing protein targets the NuA3 acetyltransferase complex via histone H3 lysine 36 trimethylation to coordinate transcriptional elongation at coding regions. Molecular & Cellular Proteomics : McP. 13: 2883-95. PMID 25104842 DOI: 10.1074/Mcp.M114.038224 |
0.882 |
|
| 2014 |
Jha DK, Pfister SX, Humphrey TC, Strahl BD. SET-ting the stage for DNA repair. Nature Structural & Molecular Biology. 21: 655-7. PMID 25093525 DOI: 10.1038/Nsmb.2866 |
0.68 |
|
| 2014 |
Wozniak GG, Strahl BD. Catalysis-dependent stabilization of Bre1 fine-tunes histone H2B ubiquitylation to regulate gene transcription. Genes & Development. 28: 1647-52. PMID 25085417 DOI: 10.1101/Gad.243121.114 |
0.849 |
|
| 2014 |
Shanle EK, Rothbart SB, Strahl BD. Chromatin biochemistry enters the next generation of code 'seq-ing'. Nature Methods. 11: 799-800. PMID 25075906 DOI: 10.1038/Nmeth.3044 |
0.86 |
|
| 2014 |
Jha DK, Strahl BD. An RNA polymerase II-coupled function for histone H3K36 methylation in checkpoint activation and DSB repair. Nature Communications. 5: 3965. PMID 24910128 DOI: 10.1038/Ncomms4965 |
0.68 |
|
| 2014 |
Greer EL, Beese-Sims SE, Brookes E, Spadafora R, Zhu Y, Rothbart SB, Aristizábal-Corrales D, Chen S, Badeaux AI, Jin Q, Wang W, Strahl BD, Colaiácovo MP, Shi Y. A histone methylation network regulates transgenerational epigenetic memory in C. elegans. Cell Reports. 7: 113-26. PMID 24685137 DOI: 10.1016/J.Celrep.2014.02.044 |
0.787 |
|
| 2014 |
Wozniak GG, Strahl BD. Hitting the 'mark': interpreting lysine methylation in the context of active transcription. Biochimica Et Biophysica Acta. 1839: 1353-61. PMID 24631869 DOI: 10.1016/J.Bbagrm.2014.03.002 |
0.872 |
|
| 2014 |
Rothbart SB, Strahl BD. Interpreting the language of histone and DNA modifications. Biochimica Et Biophysica Acta. 1839: 627-43. PMID 24631868 DOI: 10.1016/J.Bbagrm.2014.03.001 |
0.785 |
|
| 2014 |
Kim HS, Mukhopadhyay R, Rothbart SB, Silva AC, Vanoosthuyse V, Radovani E, Kislinger T, Roguev A, Ryan CJ, Xu J, Jahari H, Hardwick KG, Greenblatt JF, Krogan NJ, Fillingham JS, ... Strahl BD, et al. Identification of a BET family bromodomain/casein kinase II/TAF-containing complex as a regulator of mitotic condensin function. Cell Reports. 6: 892-905. PMID 24565511 DOI: 10.1016/J.Celrep.2014.01.029 |
0.709 |
|
| 2014 |
Klein BJ, Piao L, Xi Y, Rincon-Arano H, Rothbart SB, Peng D, Wen H, Larson C, Zhang X, Zheng X, Cortazar MA, Peña PV, Mangan A, Bentley DL, Strahl BD, et al. The histone-H3K4-specific demethylase KDM5B binds to its substrate and product through distinct PHD fingers. Cell Reports. 6: 325-35. PMID 24412361 DOI: 10.1016/J.Celrep.2013.12.021 |
0.774 |
|
| 2014 |
Dronamraju R, Strahl BD. A feed forward circuit comprising Spt6, Ctk1 and PAF regulates Pol II CTD phosphorylation and transcription elongation. Nucleic Acids Research. 42: 870-81. PMID 24163256 DOI: 10.1093/Nar/Gkt1003 |
0.546 |
|
| 2013 |
Kinkelin K, Wozniak GG, Rothbart SB, Lidschreiber M, Strahl BD, Cramer P. Structures of RNA polymerase II complexes with Bye1, a chromatin-binding PHF3/DIDO homologue. Proceedings of the National Academy of Sciences of the United States of America. 110: 15277-82. PMID 24003114 DOI: 10.1073/Pnas.1311010110 |
0.84 |
|
| 2013 |
Hattori T, Taft JM, Swist KM, Luo H, Witt H, Slattery M, Koide A, Ruthenburg AJ, Krajewski K, Strahl BD, White KP, Farnham PJ, Zhao Y, Koide S. Recombinant antibodies to histone post-translational modifications. Nature Methods. 10: 992-5. PMID 23955773 DOI: 10.1038/Nmeth.2605 |
0.795 |
|
| 2013 |
McDaniel SL, Strahl BD. Stress-free with Rpd3: a unique chromatin complex mediates the response to oxidative stress. Molecular and Cellular Biology. 33: 3726-7. PMID 23938299 DOI: 10.1128/Mcb.01000-13 |
0.755 |
|
| 2013 |
Gatchalian J, Fütterer A, Rothbart SB, Tong Q, Rincon-Arano H, Sánchez de Diego A, Groudine M, Strahl BD, Martínez-A C, van Wely KH, Kutateladze TG. Dido3 PHD modulates cell differentiation and division. Cell Reports. 4: 148-58. PMID 23831028 DOI: 10.1016/J.Celrep.2013.06.014 |
0.711 |
|
| 2013 |
Ali M, Rincón-Arano H, Zhao W, Rothbart SB, Tong Q, Parkhurst SM, Strahl BD, Deng LW, Groudine M, Kutateladze TG. Molecular basis for chromatin binding and regulation of MLL5. Proceedings of the National Academy of Sciences of the United States of America. 110: 11296-301. PMID 23798402 DOI: 10.1073/Pnas.1310156110 |
0.74 |
|
| 2013 |
Rothbart SB, Dickson BM, Ong MS, Krajewski K, Houliston S, Kireev DB, Arrowsmith CH, Strahl BD. Multivalent histone engagement by the linked tandem Tudor and PHD domains of UHRF1 is required for the epigenetic inheritance of DNA methylation. Genes & Development. 27: 1288-98. PMID 23752590 DOI: 10.1101/Gad.220467.113 |
0.817 |
|
| 2013 |
Law JA, Du J, Hale CJ, Feng S, Krajewski K, Palanca AM, Strahl BD, Patel DJ, Jacobsen SE. Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. Nature. 498: 385-9. PMID 23636332 DOI: 10.1038/Nature12178 |
0.539 |
|
| 2013 |
Cai L, Rothbart SB, Lu R, Xu B, Chen WY, Tripathy A, Rockowitz S, Zheng D, Patel DJ, Allis CD, Strahl BD, Song J, Wang GG. An H3K36 methylation-engaging Tudor motif of polycomb-like proteins mediates PRC2 complex targeting. Molecular Cell. 49: 571-82. PMID 23273982 DOI: 10.1016/J.Molcel.2012.11.026 |
0.882 |
|
| 2013 |
Rothbart SB, Dickson BM, Ong MS, Krajewski K, Houliston S, Kireev DB, Arrowsmith CH, Strahl BD. Abstract PR03: Multivalent histone engagement by the linked tandem Tudor and PHD domains of UHRF1 is required for DNA methylation maintenance Cancer Research. 73. DOI: 10.1158/1538-7445.Cec13-Pr03 |
0.616 |
|
| 2012 |
Ali M, Yan K, Lalonde ME, Degerny C, Rothbart SB, Strahl BD, Côté J, Yang XJ, Kutateladze TG. Tandem PHD fingers of MORF/MOZ acetyltransferases display selectivity for acetylated histone H3 and are required for the association with chromatin. Journal of Molecular Biology. 424: 328-38. PMID 23063713 DOI: 10.1016/J.Jmb.2012.10.004 |
0.794 |
|
| 2012 |
Nishikori S, Hattori T, Fuchs SM, Yasui N, Wojcik J, Koide A, Strahl BD, Koide S. Broad ranges of affinity and specificity of anti-histone antibodies revealed by a quantitative peptide immunoprecipitation assay. Journal of Molecular Biology. 424: 391-9. PMID 23041298 DOI: 10.1016/J.Jmb.2012.09.022 |
0.711 |
|
| 2012 |
Rothbart SB, Krajewski K, Nady N, Tempel W, Xue S, Badeaux AI, Barsyte-Lovejoy D, Martinez JY, Bedford MT, Fuchs SM, Arrowsmith CH, Strahl BD. Association of UHRF1 with methylated H3K9 directs the maintenance of DNA methylation. Nature Structural & Molecular Biology. 19: 1155-60. PMID 23022729 DOI: 10.1038/Nsmb.2391 |
0.831 |
|
| 2012 |
Rothbart SB, Krajewski K, Strahl BD, Fuchs SM. Peptide microarrays to interrogate the "histone code". Methods in Enzymology. 512: 107-35. PMID 22910205 DOI: 10.1016/B978-0-12-391940-3.00006-8 |
0.863 |
|
| 2012 |
Rizzardi LF, Dorn ES, Strahl BD, Cook JG. DNA replication origin function is promoted by H3K4 di-methylation in Saccharomyces cerevisiae. Genetics. 192: 371-84. PMID 22851644 DOI: 10.1534/Genetics.112.142349 |
0.604 |
|
| 2012 |
Rothbart SB, Lin S, Britton LM, Krajewski K, Keogh MC, Garcia BA, Strahl BD. Poly-acetylated chromatin signatures are preferred epitopes for site-specific histone H4 acetyl antibodies. Scientific Reports. 2: 489. PMID 22761995 DOI: 10.1038/Srep00489 |
0.766 |
|
| 2012 |
Stolzenburg S, Rots MG, Beltran AS, Rivenbark AG, Yuan X, Qian H, Strahl BD, Blancafort P. Targeted silencing of the oncogenic transcription factor SOX2 in breast cancer. Nucleic Acids Research. 40: 6725-40. PMID 22561374 DOI: 10.1093/Nar/Gks360 |
0.353 |
|
| 2012 |
Rivenbark AG, Stolzenburg S, Beltran AS, Yuan X, Rots MG, Strahl BD, Blancafort P. Epigenetic reprogramming of cancer cells via targeted DNA methylation. Epigenetics : Official Journal of the Dna Methylation Society. 7: 350-60. PMID 22419067 DOI: 10.4161/Epi.19507 |
0.449 |
|
| 2012 |
Fuchs SM, Kizer KO, Braberg H, Krogan NJ, Strahl BD. RNA polymerase II carboxyl-terminal domain phosphorylation regulates protein stability of the Set2 methyltransferase and histone H3 di- and trimethylation at lysine 36. The Journal of Biological Chemistry. 287: 3249-56. PMID 22157004 DOI: 10.1074/Jbc.M111.273953 |
0.817 |
|
| 2012 |
Rothbart SB, Fuchs SM, Nady N, Krajewski K, Tempel W, Xue S, Iberg AN, Barsyte-Lovejoy D, Martinez JY, Bedford MT, Arrowsmith CH, Strahl BD. Abstract 993: A high-throughput peptide array screen of H3K9 methyl effectors identifies UHRF1 as an exception to the “phospho/methyl switch.” Cancer Research. 72: 993-993. DOI: 10.1158/1538-7445.Am2012-993 |
0.787 |
|
| 2012 |
Nepper JF, Martinez-Marquez JY, Strahl BD. Do Multiple PHDS Matter? An Analysis of the Dual PHD Domains of Rco1 Biophysical Journal. 102: 477a. DOI: 10.1016/J.Bpj.2011.11.2613 |
0.66 |
|
| 2011 |
Fuchs SM, Strahl BD. Antibody recognition of histone post-translational modifications: emerging issues and future prospects. Epigenomics. 3: 247-9. PMID 22122332 DOI: 10.2217/Epi.11.23 |
0.737 |
|
| 2011 |
Kerr SC, Azzouz N, Fuchs SM, Collart MA, Strahl BD, Corbett AH, Laribee RN. The Ccr4-Not complex interacts with the mRNA export machinery. Plos One. 6: e18302. PMID 21464899 DOI: 10.1371/Journal.Pone.0018302 |
0.804 |
|
| 2011 |
Gardner KE, Allis CD, Strahl BD. Operating on chromatin, a colorful language where context matters. Journal of Molecular Biology. 409: 36-46. PMID 21272588 DOI: 10.1016/J.Jmb.2011.01.040 |
0.852 |
|
| 2011 |
Ramachandran S, Vogel L, Strahl BD, Dokholyan NV. Thermodynamic stability of histone H3 is a necessary but not sufficient driving force for its evolutionary conservation. Plos Computational Biology. 7: e1001042. PMID 21253558 DOI: 10.1371/Journal.Pcbi.1001042 |
0.425 |
|
| 2011 |
Gardner KE, Zhou L, Parra MA, Chen X, Strahl BD. Identification of lysine 37 of histone H2B as a novel site of methylation. Plos One. 6: e16244. PMID 21249157 DOI: 10.1371/Journal.Pone.0016244 |
0.874 |
|
| 2011 |
Fuchs SM, Krajewski K, Baker RW, Miller VL, Strahl BD. Influence of combinatorial histone modifications on antibody and effector protein recognition. Current Biology : Cb. 21: 53-8. PMID 21167713 DOI: 10.1016/J.Cub.2010.11.058 |
0.794 |
|
| 2009 |
Nakanishi S, Lee JS, Gardner KE, Gardner JM, Takahashi YH, Chandrasekharan MB, Sun ZW, Osley MA, Strahl BD, Jaspersen SL, Shilatifard A. Histone H2BK123 monoubiquitination is the critical determinant for H3K4 and H3K79 trimethylation by COMPASS and Dot1. The Journal of Cell Biology. 186: 371-7. PMID 19667127 DOI: 10.1083/Jcb.200906005 |
0.819 |
|
| 2009 |
Lickwar CR, Rao B, Shabalin AA, Nobel AB, Strahl BD, Lieb JD. The Set2/Rpd3S pathway suppresses cryptic transcription without regard to gene length or transcription frequency. Plos One. 4: e4886. PMID 19295910 DOI: 10.1371/Journal.Pone.0004886 |
0.437 |
|
| 2009 |
Fuchs SM, Laribee RN, Strahl BD. Protein modifications in transcription elongation. Biochimica Et Biophysica Acta. 1789: 26-36. PMID 18718879 DOI: 10.1016/J.Bbagrm.2008.07.008 |
0.856 |
|
| 2008 |
Henikoff S, Strahl BD, Warburton PE. Epigenomics: a roadmap to chromatin. Science (New York, N.Y.). 322: 853. PMID 18988822 DOI: 10.1126/Science.322.5903.853A |
0.559 |
|
| 2008 |
Youdell ML, Kizer KO, Kisseleva-Romanova E, Fuchs SM, Duro E, Strahl BD, Mellor J. Roles for Ctk1 and Spt6 in regulating the different methylation states of histone H3 lysine 36. Molecular and Cellular Biology. 28: 4915-26. PMID 18541663 DOI: 10.1128/Mcb.00001-08 |
0.843 |
|
| 2008 |
Merker JD, Dominska M, Greenwell PW, Rinella E, Bouck DC, Shibata Y, Strahl BD, Mieczkowski P, Petes TD. The histone methylase Set2p and the histone deacetylase Rpd3p repress meiotic recombination at the HIS4 meiotic recombination hotspot in Saccharomyces cerevisiae. Dna Repair. 7: 1298-308. PMID 18515193 DOI: 10.1016/J.Dnarep.2008.04.009 |
0.625 |
|
| 2007 |
Rivenbark AG, Strahl BD. Molecular biology. Unlocking cell fate. Science (New York, N.Y.). 318: 403-4. PMID 17947570 DOI: 10.1126/Science.1150321 |
0.429 |
|
| 2007 |
Wyce A, Xiao T, Whelan KA, Kosman C, Walter W, Eick D, Hughes TR, Krogan NJ, Strahl BD, Berger SL. H2B ubiquitylation acts as a barrier to Ctk1 nucleosomal recruitment prior to removal by Ubp8 within a SAGA-related complex. Molecular Cell. 27: 275-88. PMID 17643376 DOI: 10.1016/J.Molcel.2007.01.035 |
0.86 |
|
| 2007 |
Laribee RN, Fuchs SM, Strahl BD. H2B ubiquitylation in transcriptional control: a FACT-finding mission. Genes & Development. 21: 737-43. PMID 17403775 DOI: 10.1101/Gad.1541507 |
0.801 |
|
| 2007 |
Laribee RN, Shibata Y, Mersman DP, Collins SR, Kemmeren P, Roguev A, Weissman JS, Briggs SD, Krogan NJ, Strahl BD. CCR4/NOT complex associates with the proteasome and regulates histone methylation. Proceedings of the National Academy of Sciences of the United States of America. 104: 5836-41. PMID 17389396 DOI: 10.1073/Pnas.0607996104 |
0.847 |
|
| 2007 |
Garcia BA, Hake SB, Diaz RL, Kauer M, Morris SA, Recht J, Shabanowitz J, Mishra N, Strahl BD, Allis CD, Hunt DF. Organismal differences in post-translational modifications in histones H3 and H4. The Journal of Biological Chemistry. 282: 7641-55. PMID 17194708 DOI: 10.1074/Jbc.M607900200 |
0.796 |
|
| 2007 |
Morris SA, Rao B, Garcia BA, Hake SB, Diaz RL, Shabanowitz J, Hunt DF, Allis CD, Lieb JD, Strahl BD. Identification of histone H3 lysine 36 acetylation as a highly conserved histone modification. The Journal of Biological Chemistry. 282: 7632-40. PMID 17189264 DOI: 10.1074/Jbc.M607909200 |
0.831 |
|
| 2007 |
Xiao T, Shibata Y, Rao B, Laribee RN, O'Rourke R, Buck MJ, Greenblatt JF, Krogan NJ, Lieb JD, Strahl BD. The RNA polymerase II kinase Ctk1 regulates positioning of a 5' histone methylation boundary along genes. Molecular and Cellular Biology. 27: 721-31. PMID 17088384 DOI: 10.1128/Mcb.01628-06 |
0.868 |
|
| 2006 |
Kizer KO, Xiao T, Strahl BD. Accelerated nuclei preparation and methods for analysis of histone modifications in yeast. Methods (San Diego, Calif.). 40: 296-302. PMID 17101440 DOI: 10.1016/J.Ymeth.2006.06.022 |
0.847 |
|
| 2006 |
Biswas D, Dutta-Biswas R, Mitra D, Shibata Y, Strahl BD, Formosa T, Stillman DJ. Opposing roles for Set2 and yFACT in regulating TBP binding at promoters. The Embo Journal. 25: 4479-89. PMID 16977311 DOI: 10.1038/Sj.Emboj.7601333 |
0.474 |
|
| 2006 |
Tripic T, Edmondson DG, Davie JK, Strahl BD, Dent SY. The Set2 methyltransferase associates with Ssn6 yet Tup1-Ssn6 repression is independent of histone methylation. Biochemical and Biophysical Research Communications. 339: 905-14. PMID 16329992 DOI: 10.1016/J.Bbrc.2005.11.103 |
0.793 |
|
| 2006 |
Vojnic E, Simon B, Strahl BD, Sattler M, Cramer P. Structure and carboxyl-terminal domain (CTD) binding of the Set2 SRI domain that couples histone H3 Lys36 methylation to transcription. The Journal of Biological Chemistry. 281: 13-5. PMID 16286474 DOI: 10.1074/Jbc.C500423200 |
0.417 |
|
| 2005 |
Keogh MC, Kurdistani SK, Morris SA, Ahn SH, Podolny V, Collins SR, Schuldiner M, Chin K, Punna T, Thompson NJ, Boone C, Emili A, Weissman JS, Hughes TR, Strahl BD, et al. Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex. Cell. 123: 593-605. PMID 16286008 DOI: 10.1016/J.Cell.2005.10.025 |
0.776 |
|
| 2005 |
Rao B, Shibata Y, Strahl BD, Lieb JD. Dimethylation of histone H3 at lysine 36 demarcates regulatory and nonregulatory chromatin genome-wide. Molecular and Cellular Biology. 25: 9447-59. PMID 16227595 DOI: 10.1128/Mcb.25.21.9447-9459.2005 |
0.584 |
|
| 2005 |
Adhvaryu KK, Morris SA, Strahl BD, Selker EU. Methylation of histone H3 lysine 36 is required for normal development in Neurospora crassa. Eukaryotic Cell. 4: 1455-64. PMID 16087750 DOI: 10.1128/Ec.4.8.1455-1464.2005 |
0.728 |
|
| 2005 |
Morris SA, Shibata Y, Noma K, Tsukamoto Y, Warren E, Temple B, Grewal SI, Strahl BD. Histone H3 K36 methylation is associated with transcription elongation in Schizosaccharomyces pombe. Eukaryotic Cell. 4: 1446-54. PMID 16087749 DOI: 10.1128/Ec.4.8.1446-1454.2005 |
0.719 |
|
| 2005 |
Laribee RN, Krogan NJ, Xiao T, Shibata Y, Hughes TR, Greenblatt JF, Strahl BD. BUR kinase selectively regulates H3 K4 trimethylation and H2B ubiquitylation through recruitment of the PAF elongation complex. Current Biology : Cb. 15: 1487-93. PMID 16040246 DOI: 10.1016/J.Cub.2005.07.028 |
0.857 |
|
| 2005 |
Kizer KO, Phatnani HP, Shibata Y, Hall H, Greenleaf AL, Strahl BD. A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 K36 methylation with transcript elongation. Molecular and Cellular Biology. 25: 3305-16. PMID 15798214 DOI: 10.1128/Mcb.25.8.3305-3316.2005 |
0.743 |
|
| 2005 |
Xiao T, Kao CF, Krogan NJ, Sun ZW, Greenblatt JF, Osley MA, Strahl BD. Histone H2B ubiquitylation is associated with elongating RNA polymerase II. Molecular and Cellular Biology. 25: 637-51. PMID 15632065 DOI: 10.1128/Mcb.25.2.637-651.2005 |
0.85 |
|
| 2005 |
Lee DY, Teyssier C, Strahl BD, Stallcup MR. Role of protein methylation in regulation of transcription. Endocrine Reviews. 26: 147-70. PMID 15479858 DOI: 10.1210/Er.2004-0008 |
0.636 |
|
| 2004 |
Lee CK, Shibata Y, Rao B, Strahl BD, Lieb JD. Evidence for nucleosome depletion at active regulatory regions genome-wide. Nature Genetics. 36: 900-5. PMID 15247917 DOI: 10.1038/Ng1400 |
0.562 |
|
| 2003 |
Anest V, Hanson JL, Cogswell PC, Steinbrecher KA, Strahl BD, Baldwin AS. A nucleosomal function for IkappaB kinase-alpha in NF-kappaB-dependent gene expression. Nature. 423: 659-63. PMID 12789343 DOI: 10.1038/Nature01648 |
0.375 |
|
| 2003 |
Xiao T, Hall H, Kizer KO, Shibata Y, Hall MC, Borchers CH, Strahl BD. Phosphorylation of RNA polymerase II CTD regulates H3 methylation in yeast. Genes & Development. 17: 654-63. PMID 12629047 DOI: 10.1101/Gad.1055503 |
0.857 |
|
| 2002 |
Briggs SD, Xiao T, Sun ZW, Caldwell JA, Shabanowitz J, Hunt DF, Allis CD, Strahl BD. Gene silencing: trans-histone regulatory pathway in chromatin. Nature. 418: 498. PMID 12152067 DOI: 10.1038/Nature00970 |
0.881 |
|
| 2002 |
Li J, Lin Q, Yoon HG, Huang ZQ, Strahl BD, Allis CD, Wong J. Involvement of histone methylation and phosphorylation in regulation of transcription by thyroid hormone receptor Molecular and Cellular Biology. 22: 5688-5697. PMID 12138181 DOI: 10.1128/Mcb.22.16.5688-5697.2002 |
0.672 |
|
| 2002 |
Miller WL, Shafiee-Kermani F, Strahl BD, Huang HJ. The nature of FSH induction by GnRH. Trends in Endocrinology and Metabolism: Tem. 13: 257-63. PMID 12128287 DOI: 10.1016/S1043-2760(02)00614-8 |
0.51 |
|
| 2002 |
Briggs SD, Strahl BD. Unraveling heterochromatin. Nature Genetics. 30: 241-2. PMID 11919553 DOI: 10.1038/ng0302-241 |
0.343 |
|
| 2002 |
Strahl BD, Grant PA, Briggs SD, Sun ZW, Bone JR, Caldwell JA, Mollah S, Cook RG, Shabanowitz J, Hunt DF, Allis CD. Set2 is a nucleosomal histone H3-selective methyltransferase that mediates transcriptional repression. Molecular and Cellular Biology. 22: 1298-306. PMID 11839797 DOI: 10.1128/Mcb.22.5.1298-1306.2002 |
0.706 |
|
| 2002 |
Bryk M, Briggs SD, Strahl BD, Curcio MJ, Allis CD, Winston F. Evidence that Set1, a factor required for methylation of histone H3, regulates rDNA silencing in S. cerevisiae by a Sir2-independent mechanism. Current Biology : Cb. 12: 165-70. PMID 11818070 DOI: 10.1016/S0960-9822(01)00652-2 |
0.704 |
|
| 2001 |
Huang HJ, Sebastian J, Strahl BD, Wu JC, Miller WL. Transcriptional Regulation of the Ovine Follicle-Stimulating Hormone-β Gene by Activin and Gonadotropin-Releasing Hormone (GnRH): Involvement of Two Proximal Activator Protein-1 Sites for GnRH Stimulation. Endocrinology. 142: 2267-2274. PMID 28201312 DOI: 10.1210/endo.142.6.8203 |
0.458 |
|
| 2001 |
Briggs SD, Bryk M, Strahl BD, Cheung WL, Davie JK, Dent SY, Winston F, Allis CD. Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae. Genes & Development. 15: 3286-95. PMID 11751634 DOI: 10.1101/Gad.940201 |
0.796 |
|
| 2001 |
Ma H, Baumann CT, Li H, Strahl BD, Rice R, Jelinek MA, Aswad DW, Allis CD, Hager GL, Stallcup MR. Hormone-dependent, CARM1-directed, arginine-specific methylation of histone H3 on a steroid-regulated promoter. Current Biology : Cb. 11: 1981-5. PMID 11747826 DOI: 10.1016/S0960-9822(01)00600-5 |
0.745 |
|
| 2001 |
Strahl BD, Briggs SD, Brame CJ, Caldwell JA, Koh SS, Ma H, Cook RG, Shabanowitz J, Hunt DF, Stallcup MR, Allis CD. Methylation of histone H4 at arginine 3 occurs in vivo and is mediated by the nuclear receptor coactivator PRMT1. Current Biology : Cb. 11: 996-1000. PMID 11448779 DOI: 10.1016/S0960-9822(01)00294-9 |
0.735 |
|
| 2001 |
Wang H, Huang ZQ, Xia L, Feng Q, Erdjument-Bromage H, Strahl BD, Briggs SD, Allis CD, Wong J, Tempst P, Zhang Y. Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor Science. 293: 853-857. PMID 11387442 DOI: 10.1126/Science.1060781 |
0.712 |
|
| 2001 |
Huang HJ, Sebastian J, Strahl BD, Wu JC, Miller WL. Transcriptional regulation of the ovine follicle-stimulating hormone-beta gene by activin and gonadotropin-releasing hormone (GnRH): involvement of two proximal activator protein-1 sites for GnRH stimulation. Endocrinology. 142: 2267-74. PMID 11356672 DOI: 10.1210/Endo.142.6.8203 |
0.494 |
|
| 2001 |
Huang HJ, Sebastian J, Strahl BD, Wu JC, Miller WL. The promoter for the ovine follicle-stimulating hormone-beta gene (FSHbeta) confers FSHbeta-like expression on luciferase in transgenic mice: regulatory studies in vivo and in vitro. Endocrinology. 142: 2260-6. PMID 11356671 DOI: 10.1210/Endo.142.6.8202 |
0.451 |
|
| 2001 |
Nakayama J, Rice JC, Strahl BD, Allis CD, Grewal SIS. Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly Science. 292: 110-113. PMID 11283354 DOI: 10.1126/Science.1060118 |
0.711 |
|
| 2000 |
Rea S, Eisenhaber F, O'Carroll D, Strahl BD, Sun ZW, Schmid M, Opravil S, Mechtier K, Ponting CP, Allis CD, Jenuwein T. Regulation of chromatin structure by site-specific histone H3 methyltransferases Nature. 406: 593-599. PMID 10949293 DOI: 10.1038/35020506 |
0.628 |
|
| 2000 |
Strahl BD, Allis CD. The language of covalent histone modifications. Nature. 403: 41-5. PMID 10638745 DOI: 10.1038/47412 |
0.709 |
|
| 1999 |
Strahl BD, Ohba R, Cook RG, Allis CD. Methylation of histone H3 at lysine 4 is highly conserved and correlates with transcriptionally active nuclei in Tetrahymena. Proceedings of the National Academy of Sciences of the United States of America. 96: 14967-72. PMID 10611321 DOI: 10.1073/Pnas.96.26.14967 |
0.707 |
|
| 1998 |
Strahl BD, Huang HJ, Sebastian J, Ghosh BR, Miller WL. Transcriptional activation of the ovine follicle-stimulating hormone beta-subunit gene by gonadotropin-releasing hormone: involvement of two activating protein-1-binding sites and protein kinase C. Endocrinology. 139: 4455-65. PMID 9794452 DOI: 10.1210/Endo.139.11.6281 |
0.517 |
|
| 1997 |
Strahl BD, Huang HJ, Pedersen NR, Wu JC, Ghosh BR, Miller WL. Two Proximal Activating Protein-1-Binding Sites Are Sufficient to Stimulate Transcription of the Ovine Follicle-Stimulating Hormone-β Gene. Endocrinology. 138: 2621-2631. PMID 28199644 DOI: 10.1210/endo.138.6.5205 |
0.469 |
|
| 1996 |
Ghosh BR, Wu JC, Strahl BD, Childs GV, Miller WL. Inhibin and estradiol alter gonadotropes differentially in ovine pituitary cultures: changing gonadotrope numbers and calcium responses to gonadotropin-releasing hormone. Endocrinology. 137: 5144-54. PMID 8895389 DOI: 10.1210/Endo.137.11.8895389 |
0.407 |
|
| Show low-probability matches. |
