| Year |
Citation |
Score |
| 2023 |
Baldwin ET, van Eeuwen T, Hoyos D, Zalevsky A, Tchesnokov EP, Sánchez R, Miller BD, Di Stefano LH, Ruiz FX, Hancock M, Işik E, Mendez-Dorantes C, Walpole T, Nichols C, Wan P, et al. Structures, functions, and adaptations of the human LINE-1 ORF2 protein. Nature. PMID 38096902 DOI: 10.1038/s41586-023-06947-z |
0.474 |
|
| 2020 |
Leandro J, Khamrui S, Wang H, Suebsuwong C, Nemeria NS, Huynh K, Moustakim M, Secor C, Wang M, Dodatko T, Stauffer B, Wilson CG, Yu C, Arkin MR, Jordan F, ... Sanchez R, et al. Inhibition and Crystal Structure of the Human DHTKD1-Thiamin Diphosphate Complex. Acs Chemical Biology. PMID 32633484 DOI: 10.1021/Acschembio.0C00114 |
0.341 |
|
| 2016 |
Meslamani J, Smith SG, Sanchez R, Zhou MM. Structural features and inhibitors of bromodomains. Drug Discovery Today. Technologies. 19: 3-15. PMID 27769355 DOI: 10.1016/J.Ddtec.2016.09.001 |
0.395 |
|
| 2016 |
Zhao W, Ho L, Wang J, Bi W, Yemul S, Ward L, Freire D, Mazzola P, Brathwaite J, Mezei M, Sanchez R, Elder GA, Pasinetti GM. In Silico Modelling of Novel Drug Ligands Associated with Abnormal Tau Phosphorylation: Implications for Concussion Associated Tauopathy Intervention. Journal of Cellular Biochemistry. PMID 26910498 DOI: 10.1002/Jcb.25521 |
0.33 |
|
| 2014 |
Sanchez R, Meslamani J, Zhou MM. The bromodomain: from epigenome reader to druggable target. Biochimica Et Biophysica Acta. 1839: 676-85. PMID 24686119 DOI: 10.1016/J.Bbagrm.2014.03.011 |
0.366 |
|
| 2013 |
Jin YJ, Cai CY, Mezei M, Ohlmeyer M, Sanchez R, Burakoff SJ. Identification of a novel binding site between HIV type 1 Nef C-terminal flexible loop and AP2 required for Nef-mediated CD4 downregulation. Aids Research and Human Retroviruses. 29: 725-31. PMID 23151229 DOI: 10.1089/Aid.2012.0286 |
0.301 |
|
| 2012 |
Zhang G, Sanchez R, Zhou MM. Scaling the druggability landscape of human bromodomains, a new class of drug targets. Journal of Medicinal Chemistry. 55: 7342-5. PMID 22928775 DOI: 10.1021/Jm3011977 |
0.356 |
|
| 2012 |
Ghersi D, Sanchez R. Automated identification of binding sites for phosphorylated ligands in protein structures. Proteins. 80: 2347-58. PMID 22619105 DOI: 10.1002/Prot.24117 |
0.388 |
|
| 2012 |
Lin Y, Yoo S, Sanchez R. SiteComp: a server for ligand binding site analysis in protein structures. Bioinformatics (Oxford, England). 28: 1172-3. PMID 22368247 DOI: 10.1093/Bioinformatics/Bts095 |
0.342 |
|
| 2011 |
Ghersi D, Sanchez R. Beyond structural genomics: computational approaches for the identification of ligand binding sites in protein structures. Journal of Structural and Functional Genomics. 12: 109-17. PMID 21537951 DOI: 10.1007/S10969-011-9110-6 |
0.426 |
|
| 2011 |
Sanchez R, Zhou MM. The PHD finger: a versatile epigenome reader. Trends in Biochemical Sciences. 36: 364-72. PMID 21514168 DOI: 10.1016/J.Tibs.2011.03.005 |
0.359 |
|
| 2011 |
Chakravarty S, Ghersi D, Sanchez R. Systematic assessment of accuracy of comparative model of proteins belonging to different structural fold classes. Journal of Molecular Modeling. 17: 2831-7. PMID 21301906 DOI: 10.1007/S00894-011-0976-9 |
0.47 |
|
| 2010 |
Zhang Q, Chakravarty S, Ghersi D, Zeng L, Plotnikov AN, Sanchez R, Zhou MM. Biochemical profiling of histone binding selectivity of the yeast bromodomain family. Plos One. 5: e8903. PMID 20126658 DOI: 10.1371/Journal.Pone.0008903 |
0.328 |
|
| 2009 |
Ghersi D, Sanchez R. EasyMIFS and SiteHound: a toolkit for the identification of ligand-binding sites in protein structures. Bioinformatics (Oxford, England). 25: 3185-6. PMID 19789268 DOI: 10.1093/Bioinformatics/Btp562 |
0.392 |
|
| 2009 |
Mobarec JC, Sanchez R, Filizola M. Modern homology modeling of G-protein coupled receptors: which structural template to use? Journal of Medicinal Chemistry. 52: 5207-16. PMID 19627087 DOI: 10.1021/Jm9005252 |
0.726 |
|
| 2009 |
Hernandez M, Ghersi D, Sanchez R. SITEHOUND-web: a server for ligand binding site identification in protein structures. Nucleic Acids Research. 37: W413-6. PMID 19398430 DOI: 10.1093/Nar/Gkp281 |
0.379 |
|
| 2009 |
Schwede T, Sali A, Honig B, Levitt M, Berman HM, Jones D, Brenner SE, Burley SK, Das R, Dokholyan NV, Dunbrack RL, Fidelis K, Fiser A, Godzik A, Huang YJ, ... ... Sanchez R, et al. Outcome of a workshop on applications of protein models in biomedical research. Structure (London, England : 1993). 17: 151-9. PMID 19217386 DOI: 10.1016/J.Str.2008.12.014 |
0.517 |
|
| 2009 |
Ghersi D, Sanchez R. Improving accuracy and efficiency of blind protein-ligand docking by focusing on predicted binding sites. Proteins. 74: 417-24. PMID 18636505 DOI: 10.1002/Prot.22154 |
0.388 |
|
| 2009 |
Mobarec JC, Sanchez R, Filizola M. On Template Selection for Homology Modeling of G-Protein Coupled Receptors Biophysical Journal. 96: 653a. DOI: 10.1016/J.Bpj.2008.12.3447 |
0.721 |
|
| 2008 |
Chakravarty S, Godbole S, Zhang B, Berger S, Sanchez R. Systematic analysis of the effect of multiple templates on the accuracy of comparative models of protein structure Bmc Structural Biology. 8. PMID 18631402 DOI: 10.1186/1472-6807-8-31 |
0.446 |
|
| 2006 |
Madhusudhan MS, Marti-Renom MA, Sanchez R, Sali A. Variable gap penalty for protein sequence-structure alignment. Protein Engineering, Design & Selection : Peds. 19: 129-33. PMID 16423846 DOI: 10.1093/Protein/Gzj005 |
0.562 |
|
| 2005 |
Chakravarty S, Wang L, Sanchez R. Accuracy of structure-derived properties in simple comparative models of protein structures. Nucleic Acids Research. 33: 244-59. PMID 15647507 DOI: 10.1093/Nar/Gki162 |
0.472 |
|
| 2004 |
Chakravarty S, Sanchez R. Systematic analysis of added-value in simple comparative models of protein structure. Structure (London, England : 1993). 12: 1461-70. PMID 15296739 DOI: 10.1016/J.Str.2004.05.018 |
0.432 |
|
| 2004 |
Oussenko IA, Sanchez R, Bechhofer DH. Bacillus subtilis YhcR, a high-molecular-weight, nonspecific endonuclease with a unique domain structure. Journal of Bacteriology. 186: 5376-83. PMID 15292138 DOI: 10.1128/Jb.186.16.5376-5383.2004 |
0.312 |
|
| 2004 |
Mujtaba S, He Y, Zeng L, Yan S, Plotnikova O, Sachchidanand, Sanchez R, Zeleznik-Le NJ, Ronai Z, Zhou MM. Structural mechanism of the bromodomain of the coactivator CBP in p53 transcriptional activation. Molecular Cell. 13: 251-63. PMID 14759370 DOI: 10.1016/S1097-2765(03)00528-8 |
0.332 |
|
| 2002 |
Oussenko IA, Sanchez R, Bechhofer DH. Bacillus subtilis YhaM, a member of a new family of 3'-to-5' exonucleases in gram-positive bacteria. Journal of Bacteriology. 184: 6250-9. PMID 12399495 DOI: 10.1128/Jb.184.22.6250-6259.2002 |
0.361 |
|
| 2002 |
Sahr K, Dias DC, Sanchez R, Chen D, Chen SW, Gudas LJ, Baron MH. Structure, upstream promoter region, and functional domains of a mouse and human Mix paired-like homeobox gene. Gene. 291: 135-47. PMID 12095687 DOI: 10.1016/S0378-1119(02)00590-5 |
0.412 |
|
| 2002 |
Melo F, Sánchez R, Sali A. Statistical potentials for fold assessment. Protein Science : a Publication of the Protein Society. 11: 430-48. PMID 11790853 DOI: 10.1002/Pro.110430 |
0.557 |
|
| 2001 |
Gopal S, Schroeder M, Pieper U, Sczyrba A, Aytekin-Kurban G, Bekiranov S, Eduardo Fajardo J, Eswar N, Sanchez R, Sali A, Gaasterland T. Homology-based annotation yields 1,042 new candidate genes in the drosophila melanogaster genome Nature Genetics. 27: 337-340. PMID 11242120 DOI: 10.1038/85922 |
0.521 |
|
| 2001 |
Sánchez R, Sali A. Comparative protein structure modeling. Introduction and practical examples with modeller. Methods in Molecular Biology (Clifton, N.J.). 143: 97-129. PMID 11084904 DOI: 10.1385/1-59259-368-2:97 |
0.598 |
|
| 2000 |
Sánchez R, Pieper U, Melo F, Eswar N, Martí-Renom MA, Madhusudhan MS, Mirković N, Sali A. Protein structure modeling for structural genomics. Nature Structural Biology. 986-90. PMID 11104007 DOI: 10.1038/80776 |
0.618 |
|
| 1999 |
Sánchez R, S̆ali A. ModBase: a database of comparative protein structure models. Bioinformatics. 15: 1060-1061. PMID 10745998 DOI: 10.1093/Bioinformatics/15.12.1060 |
0.622 |
|
| 1999 |
Miwa JM, Ibanez-Tallon I, Crabtree GW, Sánchez R, Sali A, Role LW, Heintz N. lynx1, an endogenous toxin-like modulator of nicotinic acetylcholine receptors in the mammalian CNS. Neuron. 23: 105-14. PMID 10402197 DOI: 10.1016/S0896-6273(00)80757-6 |
0.512 |
|
| 1999 |
Sánchez R, Šali A. Comparative Protein Structure Modeling in Genomics Journal of Computational Physics. 151: 388-401. DOI: 10.1006/Jcph.1999.6200 |
0.633 |
|
| 1998 |
Sánchez R, Sali A. Large-scale protein structure modeling of the Saccharomyces cerevisiae genome. Proceedings of the National Academy of Sciences of the United States of America. 95: 13597-602. PMID 9811845 DOI: 10.1073/Pnas.95.23.13597 |
0.612 |
|
| 1997 |
Sánchez R, Sali A. Advances in comparative protein-structure modelling. Current Opinion in Structural Biology. 7: 206-14. PMID 9094331 DOI: 10.1016/S0959-440X(97)80027-9 |
0.635 |
|
| 1997 |
Hidalgo ME, Sánchez R, Pérez DG, Rodríguez MA, García J, Orozco E. Molecular characterization of the Entamoeba histolytica enolase gene and modelling of the predicted protein Fems Microbiology Letters. 148: 123-129. PMID 9084139 DOI: 10.1111/J.1574-6968.1997.Tb10277.X |
0.398 |
|
| 1997 |
Sánchez R, Šali A. Comparative protein structure modeling as an optimization problem Journal of Molecular Structure-Theochem. 489-496. DOI: 10.1016/S0166-1280(96)04971-8 |
0.621 |
|
| 1997 |
Sánchez R, Šali A. Evaluation of comparative protein structure modeling by MODELLER-3 Proteins: Structure, Function, and Genetics. 29: 50-58. DOI: 10.1002/(Sici)1097-0134(1997)1+<50::Aid-Prot8>3.0.Co;2-S |
0.602 |
|
| 1996 |
Xu LZ, Sánchez R, Sali A, Heintz N. Ligand specificity of brain lipid-binding protein. The Journal of Biological Chemistry. 271: 24711-9. PMID 8798739 DOI: 10.1074/Jbc.271.40.24711 |
0.499 |
|
| 1995 |
Brukner I, Sánchez R, Suck D, Pongor S. Trinucleotide models for DNA bending propensity: comparison of models based on DNaseI digestion and nucleosome packaging data. Journal of Biomolecular Structure & Dynamics. 13: 309-317. PMID 8579790 DOI: 10.1080/07391102.1995.10508842 |
0.324 |
|
| 1995 |
Brukner I, Sánchez R, Suck D, Pongor S. Sequence-dependent bending propensity of DNA as revealed by DNase I: parameters for trinucleotides. The Embo Journal. 14: 1812-1818. DOI: 10.1002/J.1460-2075.1995.Tb07169.X |
0.327 |
|
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