| Year |
Citation |
Score |
| 2023 |
Bechteler J, Peñaloza-Bojacá G, Bell D, Burleigh JG, McDaniel SF, Christine Davis E, Sessa EB, Bippus A, Christine Cargill D, Chantanoarrapint S, Draper I, Endara L, Forrest LL, Garilleti R, Graham SW, et al. Comprehensive phylogenomic time tree of bryophytes reveals deep relationships and uncovers gene incongruences in the last 500 million years of diversification. American Journal of Botany. PMID 37792319 DOI: 10.1002/ajb2.16249 |
0.373 |
|
| 2023 |
Chen X, Fang D, Xu Y, Duan K, Yoshida S, Yang S, Sahu SK, Fu H, Guang X, Liu M, Wu C, Liu Y, Mu W, Chen Y, Fan Y, ... ... Graham SW, et al. Balanophora genomes display massively convergent evolution with other extreme holoparasites and provide novel insights into parasite-host interactions. Nature Plants. PMID 37735254 DOI: 10.1038/s41477-023-01517-7 |
0.359 |
|
| 2023 |
Garrett N, Viruel J, Klimpert N, Gomez MS, Lam VKY, Merckx VSFT, Graham SW. Plastid phylogenomics and molecular evolution of Thismiaceae (Dioscoreales). American Journal of Botany. PMID 36779918 DOI: 10.1002/ajb2.16141 |
0.624 |
|
| 2022 |
Timilsena PR, Barrett CF, Nelson AP, Wafula EK, Ayyampalayam S, McNeal JR, Yukawa T, Givnish TJ, Graham SW, Pires JC, Davis JI, Ané C, Stevenson DW, Leebens-Mack J, Martínez-Salas E, et al. Phylotranscriptomic analyses of mycoheterotrophic monocots show a continuum of convergent evolutionary changes in expressed nuclear genes from three independent nonphotosynthetic lineages. Genome Biology and Evolution. PMID 36582124 DOI: 10.1093/gbe/evac183 |
0.362 |
|
| 2022 |
Timilsena PR, Wafula EK, Barrett CF, Ayyampalayam S, McNeal JR, Rentsch JD, McKain MR, Heyduk K, Harkess A, Villegente M, Conran JG, Illing N, Fogliani B, Ané C, Pires JC, ... ... Graham SW, et al. Phylogenomic resolution of order- and family-level monocot relationships using 602 single-copy nuclear genes and 1375 BUSCO genes. Frontiers in Plant Science. 13: 876779. PMID 36483967 DOI: 10.3389/fpls.2022.876779 |
0.396 |
|
| 2022 |
Klimpert NJ, Mayer JLS, Sarzi DS, Prosdocimi F, Pinheiro F, Graham SW. Phylogenomics and plastome evolution of a Brazilian mycoheterotrophic orchid, Pogoniopsis schenckii. American Journal of Botany. PMID 36254561 DOI: 10.1002/ajb2.16084 |
0.322 |
|
| 2022 |
Lin Q, Braukmann TWA, Soto Gomez M, Mayer JLS, Pinheiro F, Merckx VSFT, Stefanović S, Graham SW. Mitochondrial genomic data are effective at placing mycoheterotrophic lineages in plant phylogeny. The New Phytologist. PMID 35731179 DOI: 10.1111/nph.18335 |
0.819 |
|
| 2022 |
Wang Y, Ruhsam M, Milne R, Graham SW, Li J, Tao T, Zhang Y, Mao K. Incomplete lineage sorting and local extinction shaped the complex evolutionary history of the Paleogene relict conifer genus, Chamaecyparis (Cupressaceae). Molecular Phylogenetics and Evolution. 172: 107485. PMID 35452840 DOI: 10.1016/j.ympev.2022.107485 |
0.366 |
|
| 2021 |
Lin Q, Ané C, Givnish TJ, Graham SW. A new carnivorous plant lineage () with a unique sticky-inflorescence trap. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34373325 DOI: 10.1073/pnas.2022724118 |
0.799 |
|
| 2021 |
McDonnell AJ, Baker WJ, Dodsworth S, Forest F, Graham SW, Johnson MG, Pokorny L, Tate J, Wicke S, Wickett NJ. Exploring Angiosperms353: Developing and applying a universal toolkit for flowering plant phylogenomics. Applications in Plant Sciences. 9. PMID 34336400 DOI: 10.1002/aps3.11443 |
0.322 |
|
| 2021 |
Starko S, Bringloe TT, Gomez MS, Darby H, Graham SW, Martone PT. Genomic rearrangements and sequence evolution across brown algal organelles. Genome Biology and Evolution. PMID 34061182 DOI: 10.1093/gbe/evab124 |
0.304 |
|
| 2021 |
Jost M, Samain MS, Marques I, Graham SW, Wanke S. Discordant Phylogenomic Placement of Hydnoraceae and Lactoridaceae Within Piperales Using Data From All Three Genomes. Frontiers in Plant Science. 12: 642598. PMID 33912209 DOI: 10.3389/fpls.2021.642598 |
0.673 |
|
| 2020 |
Soto Gomez M, Lin Q, da Silva Leal E, Gallaher TJ, Scherberich D, Mennes CB, Smith SY, Graham SW. A bi-organellar phylogenomic study of Pandanales: inference of higher-order relationships and unusual rate-variation patterns. Cladistics : the International Journal of the Willi Hennig Society. 36: 481-504. PMID 34618964 DOI: 10.1111/cla.12417 |
0.805 |
|
| 2019 |
Wong GK, Soltis DE, Leebens-Mack J, Wickett NJ, Barker MS, de Peer YV, Graham SW, Melkonian M. Sequencing and Analyzing the Transcriptomes of a Thousand Species Across the Tree of Life for Green Plants. Annual Review of Plant Biology. PMID 31851546 DOI: 10.1146/Annurev-Arplant-042916-041040 |
0.576 |
|
| 2019 |
Bell D, Lin Q, Gerelle WK, Joya S, Chang Y, Taylor ZN, Rothfels CJ, Larsson A, Villarreal JC, Li FW, Pokorny L, Szövényi P, Crandall-Stotler B, DeGironimo L, Floyd SK, ... ... Graham SW, et al. Organellomic data sets confirm a cryptic consensus on (unrooted) land-plant relationships and provide new insights into bryophyte molecular evolution. American Journal of Botany. PMID 31814117 DOI: 10.1002/Ajb2.1397 |
0.822 |
|
| 2019 |
Starko S, Soto Gomez M, Darby H, Demes KW, Kawai H, Yotsukura N, Lindstrom SC, Keeling PJ, Graham SW, Martone PT. Corrigendum to "A comprehensive kelp phylogeny sheds light on the evolution of an ecosystem" [Mol. Phylogenet. Evol. 136 (2019) 138-150]. Molecular Phylogenetics and Evolution. 140: 106625. PMID 31542344 DOI: 10.1016/J.Ympev.2019.106625 |
0.316 |
|
| 2019 |
Viruel J, Conejero M, Hidalgo O, Pokorny L, Powell RF, Forest F, Kantar MB, Soto Gomez M, Graham SW, Gravendeel B, Wilkin P, Leitch IJ. A Target Capture-Based Method to Estimate Ploidy From Herbarium Specimens. Frontiers in Plant Science. 10: 937. PMID 31396248 DOI: 10.3389/Fpls.2019.00937 |
0.442 |
|
| 2019 |
Petersen G, Darby H, Lam VKY, Pedersen HÆ, Merckx VSFT, Zervas A, Seberg O, Graham SW. Mycoheterotrophic Epirixanthes (Polygalaceae) has a typical angiosperm mitogenome but unorthodox plastid genomes. Annals of Botany. PMID 31346602 DOI: 10.1093/Aob/Mcz114 |
0.459 |
|
| 2019 |
Starko S, Soto Gomez M, Darby H, Demes KW, Kawai H, Yotsukura N, Lindstrom SC, Keeling PJ, Graham SW, Martone PT. A comprehensive kelp phylogeny sheds light on the evolution of an ecosystem. Molecular Phylogenetics and Evolution. 136: 138-150. PMID 30980936 DOI: 10.1016/J.Ympev.2019.04.012 |
0.399 |
|
| 2019 |
Sokoloff DD, Marques I, Macfarlane TD, Remizowa MV, Lam VK, Pellicer J, Hidalgo O, Rudall PJ, Graham SW. Cryptic species in an ancient flowering‐plant lineage (Hydatellaceae, Nymphaeales) revealed by molecular and micromorphological data Taxon. 68: 1-19. DOI: 10.1002/Tax.12026 |
0.672 |
|
| 2018 |
Givnish TJ, Zuluaga A, Spalink D, Soto Gomez M, Lam VKY, Saarela JM, Sass C, Iles WJD, de Sousa DJL, Leebens-Mack J, Chris Pires J, Zomlefer WB, Gandolfo MA, Davis JI, Stevenson DW, ... ... Graham SW, et al. Monocot plastid phylogenomics, timeline, net rates of species diversification, the power of multi-gene analyses, and a functional model for the origin of monocots. American Journal of Botany. PMID 30368769 DOI: 10.1002/Ajb2.1178 |
0.772 |
|
| 2018 |
Mao K, Ruhsam M, Ma Y, Graham SW, Liu J, Thomas P, Milne RI, Hollingsworth PM. A transcriptome-based resolution for a key taxonomic controversy in Cupressaceae. Annals of Botany. PMID 30124771 DOI: 10.1093/Aob/Mcy152 |
0.449 |
|
| 2018 |
Behar H, Graham SW, Brumer H. Comprehensive cross-genome survey and phylogeny of Glycoside Hydrolase Family 16 members reveals the evolutionary origin of EG16 and XTH proteins in plant lineages. The Plant Journal : For Cell and Molecular Biology. PMID 29932263 DOI: 10.1111/Tpj.14004 |
0.552 |
|
| 2018 |
Lam VKY, Darby H, Merckx VSFT, Lim G, Yukawa T, Neubig KM, Abbott JR, Beatty GE, Provan J, Soto Gomez M, Graham SW. Phylogenomic inference in extremis: A case study with mycoheterotroph plastomes. American Journal of Botany. PMID 29730895 DOI: 10.1002/Ajb2.1070 |
0.685 |
|
| 2018 |
Cheng S, Melkonian M, Smith SA, Brockington S, Archibald JM, Delaux PM, Li FW, Melkonian B, Mavrodiev EV, Sun W, Fu Y, Yang H, Soltis DE, Graham SW, Soltis PS, et al. 10KP: A phylodiverse genome sequencing plan. Gigascience. 7: 1-9. PMID 29618049 DOI: 10.1093/Gigascience/Giy013 |
0.478 |
|
| 2018 |
Joyce EM, Crayn DM, Lam VKY, Gerelle WK, Graham SW, Nauheimer L. Evolution of Geosiris (Iridaceae): historical biogeography and plastid-genome evolution in a genus of non-photosynthetic tropical rainforest herbs disjunct across the Indian Ocean Australian Systematic Botany. 31: 504-522. DOI: 10.1071/Sb18028 |
0.527 |
|
| 2017 |
Kuzmina ML, Braukmann TWA, Fazekas AJ, Graham SW, Dewaard SL, Rodrigues A, Bennett BA, Dickinson TA, Saarela JM, Catling PM, Newmaster SG, Percy DM, Fenneman E, Lauron-Moreau A, Ford B, et al. Using herbarium-derived DNAs to assemble a large-scale DNA barcode library for the vascular plants of Canada. Applications in Plant Sciences. 5. PMID 29299394 DOI: 10.3732/Apps.1700079 |
0.781 |
|
| 2017 |
Lang D, Ullrich KK, Murat F, Fuchs J, Jenkins J, Haas FB, Piednoel M, Gundlach H, Van Bel M, Meyberg R, Vives C, Morata J, Symeonidi A, Hiss M, Muchero W, ... ... Graham SW, et al. The P. patens chromosome-scale assembly reveals moss genome structure and evolution. The Plant Journal : For Cell and Molecular Biology. PMID 29237241 DOI: 10.1111/Tpj.13801 |
0.326 |
|
| 2017 |
Lang D, Ullrich KK, Murat F, Fuchs J, Jenkins J, Haas FB, Piednoel M, Gundlach H, Van Bel M, Meyberg R, Vives C, Morata J, Symeonidi A, Hiss M, Muchero W, ... ... Graham SW, et al. The P. patens chromosome-scale assembly reveals moss genome structure and evolution. The Plant Journal : For Cell and Molecular Biology. PMID 29237241 DOI: 10.1111/Tpj.13801 |
0.326 |
|
| 2017 |
Bythell-Douglas R, Rothfels CJ, Stevenson DWD, Graham SW, Wong GK, Nelson DC, Bennett T. Evolution of strigolactone receptors by gradual neo-functionalization of KAI2 paralogues. Bmc Biology. 15: 52. PMID 28662667 DOI: 10.1186/S12915-017-0397-Z |
0.403 |
|
| 2017 |
Haslam TM, Gerelle WK, Graham SW, Kunst L. The Unique Role of the ECERIFERUM2-LIKE Clade of the BAHD Acyltransferase Superfamily in Cuticular Wax Metabolism. Plants (Basel, Switzerland). 6. PMID 28608803 DOI: 10.3390/plants6020023 |
0.31 |
|
| 2017 |
Petersen G, Cuenca A, Zervas A, Ross GT, Graham SW, Barrett CF, Davis JI, Seberg O. Mitochondrial genome evolution in Alismatales: Size reduction and extensive loss of ribosomal protein genes. Plos One. 12: e0177606. PMID 28545148 DOI: 10.1371/Journal.Pone.0177606 |
0.453 |
|
| 2017 |
Johnson KL, Cassin AM, Lonsdale A, Wong GK, Soltis D, Miles NW, Melkonian M, Melkonian B, Deyholos MK, Leebens-Mack J, Rothfels CJ, Stevenson DW, Graham SW, Wang X, Wu S, et al. Insights into the evolution of hydroxyproline rich glycoproteins from 1000 plant transcriptomes. Plant Physiology. PMID 28446636 DOI: 10.1104/Pp.17.00295 |
0.493 |
|
| 2017 |
Graham SW, Lam VK, Merckx VS. Plastomes on the edge: the evolutionary breakdown of mycoheterotroph plastid genomes. The New Phytologist. PMID 28067952 DOI: 10.1111/Nph.14398 |
0.655 |
|
| 2017 |
HEENAN PB, MACFARLANE TD, CASE AL, GRAHAM SW, VINNERSTEN A, MITCHELL C. Morphological and phylogenetic relationships of the threatened geophyte Wurmbea novae-zelandiae (Colchicaceae) from New Zealand, with notes on typification Phytotaxa. 307: 123. DOI: 10.11646/Phytotaxa.307.2.3 |
0.779 |
|
| 2016 |
Ross TG, Barrett CF, Soto Gomez M, Lam VKY, Henriquez CL, Les DH, Davis JI, Cuenca A, Petersen G, Seberg O, Thadeo M, Givnish TJ, Conran J, Stevenson DW, Graham SW. Plastid phylogenomics and molecular evolution of Alismatales. Cladistics : the International Journal of the Willi Hennig Society. 32: 160-178. PMID 34736309 DOI: 10.1111/cla.12133 |
0.661 |
|
| 2016 |
Petersen G, Seberg O, Cuenca A, Stevenson DW, Thadeo M, Davis JI, Graham S, Ross TG. Phylogeny of the Alismatales (Monocotyledons) and the relationship of Acorus (Acorales?). Cladistics : the International Journal of the Willi Hennig Society. 32: 141-159. PMID 34732019 DOI: 10.1111/cla.12120 |
0.357 |
|
| 2016 |
Givnish TJ, Zuluaga A, Marques I, Lam VKY, Gomez MS, Iles WJD, Ames M, Spalink D, Moeller JR, Briggs BG, Lyon SP, Stevenson DW, Zomlefer W, Graham SW. Phylogenomics and historical biogeography of the monocot order Liliales: out of Australia and through Antarctica. Cladistics : the International Journal of the Willi Hennig Society. 32: 581-605. PMID 34727673 DOI: 10.1111/cla.12153 |
0.763 |
|
| 2016 |
Sauquet H, Graham SW. Planning the future of plant systematics: Report on a special colloquium at the Royal Netherlands Academy of Arts and Sciences. American Journal of Botany. PMID 27919925 DOI: 10.3732/Ajb.1600327 |
0.359 |
|
| 2016 |
Jia Q, Li G, Köllner TG, Fu J, Chen X, Xiong W, Crandall-Stotler BJ, Bowman JL, Weston DJ, Zhang Y, Chen L, Xie Y, Li FW, Rothfels CJ, Larsson A, ... Graham SW, et al. Microbial-type terpene synthase genes occur widely in nonseed land plants, but not in seed plants. Proceedings of the National Academy of Sciences of the United States of America. 113: 12328-12333. PMID 27791023 DOI: 10.1073/Pnas.1607973113 |
0.512 |
|
| 2016 |
Bourque S, Jeandroz S, Grandperret V, Lehotai N, Aimé S, Soltis DE, Miles NW, Melkonian M, Deyholos MK, Leebens-Mack JH, Chase MW, Rothfels CJ, Stevenson DW, Graham SW, Wang X, et al. The Evolution of HD2 Proteins in Green Plants. Trends in Plant Science. PMID 27789157 DOI: 10.1016/J.Tplants.2016.10.001 |
0.482 |
|
| 2016 |
Cuenca A, Ross TG, Graham SW, Barrett CF, Davis JI, Seberg O, Petersen G. Localized retroprocessing as a model of intron loss in the plant mitochondrial genome. Genome Biology and Evolution. PMID 27435795 DOI: 10.1093/Gbe/Evw148 |
0.449 |
|
| 2016 |
Vasco A, Smalls TL, Graham SW, Cooper ED, Wong GK, Stevenson DW, Moran RC, Ambrose BA. Challenging the paradigms of leaf evolution: Class III HD-Zips in ferns and lycophytes. The New Phytologist. PMID 27385116 DOI: 10.1111/Nph.14075 |
0.457 |
|
| 2016 |
Lane TS, Rempe CS, Davitt J, Staton ME, Peng Y, Soltis DE, Melkonian M, Deyholos M, Leebens-Mack JH, Chase M, Rothfels CJ, Stevenson D, Graham SW, Yu J, Liu T, et al. Diversity of ABC transporter genes across the plant kingdom and their potential utility in biotechnology. Bmc Biotechnology. 16: 47. PMID 27245738 DOI: 10.1186/S12896-016-0277-6 |
0.4 |
|
| 2016 |
Lam VK, Merckx VS, Graham SW. A few-gene plastid phylogenetic framework for mycoheterotrophic monocots. American Journal of Botany. PMID 27056932 DOI: 10.3732/Ajb.1500412 |
0.741 |
|
| 2016 |
Givnish TJ, Zuluaga A, Marques I, Lam VKY, Gomez MS, Iles WJD, Ames M, Spalink D, Moeller JR, Briggs BG, Lyon SP, Stevenson DW, Zomlefer W, Graham SW. Phylogenomics and historical biogeography of the monocot order Liliales: Out of Australia and through Antarctica Cladistics. DOI: 10.1111/Cla.12153 |
0.693 |
|
| 2015 |
Li Z, Baniaga AE, Sessa EB, Scascitelli M, Graham SW, Rieseberg LH, Barker MS. Early genome duplications in conifers and other seed plants. Science Advances. 1: e1501084. PMID 26702445 DOI: 10.1126/Sciadv.1501084 |
0.499 |
|
| 2015 |
Marques I, Montgomery SA, Barker MS, Macfarlane TD, Conran JG, Catalán P, Rieseberg LH, Rudall PJ, Graham SW. Transcriptome-derived evidence supports recent polyploidization and a major phylogeographic division in Trithuria submersa (Hydatellaceae, Nymphaeales). The New Phytologist. PMID 26612464 DOI: 10.1111/Nph.13755 |
0.701 |
|
| 2015 |
Li FW, Rothfels CJ, Melkonian M, Villarreal JC, Stevenson DW, Graham SW, Wong GK, Mathews S, Pryer KM. The origin and evolution of phototropins. Frontiers in Plant Science. 6: 637. PMID 26322073 DOI: 10.3389/Fpls.2015.00637 |
0.511 |
|
| 2015 |
Li FW, Melkonian M, Rothfels CJ, Villarreal JC, Stevenson DW, Graham SW, Wong GK, Pryer KM, Mathews S. Phytochrome diversity in green plants and the origin of canonical plant phytochromes. Nature Communications. 6: 7852. PMID 26215968 DOI: 10.1038/Ncomms8852 |
0.512 |
|
| 2015 |
Rothfels CJ, Li FW, Sigel EM, Huiet L, Larsson A, Burge DO, Ruhsam M, Deyholos M, Soltis DE, Stewart CN, Shaw SW, Pokorny L, Chen T, dePamphilis C, DeGironimo L, ... ... Graham SW, et al. The evolutionary history of ferns inferred from 25 low-copy nuclear genes. American Journal of Botany. 102: 1089-107. PMID 26199366 DOI: 10.3732/Ajb.1500089 |
0.364 |
|
| 2015 |
Lam VK, Soto Gomez M, Graham SW. The Highly Reduced Plastome of Mycoheterotrophic Sciaphila (Triuridaceae) Is Colinear with Its Green Relatives and Is under Strong Purifying Selection. Genome Biology and Evolution. 7: 2220-36. PMID 26170229 DOI: 10.1093/Gbe/Evv134 |
0.717 |
|
| 2015 |
Ruhsam M, Rai HS, Mathews S, Ross TG, Graham SW, Raubeson LA, Mei W, Thomas PI, Gardner MF, Ennos RA, Hollingsworth PM. Does complete plastid genome sequencing improve species discrimination and phylogenetic resolution in Araucaria? Molecular Ecology Resources. PMID 25611173 DOI: 10.1111/1755-0998.12375 |
0.526 |
|
| 2015 |
Mennes CB, Lam VKY, Rudall PJ, Lyon SP, Graham SW, Smets EF, Merckx VSFT. Ancient Gondwana break-up explains the distribution of the mycoheterotrophic family Corsiaceae (Liliales) Journal of Biogeography. 42: 1123-1136. DOI: 10.1111/Jbi.12486 |
0.451 |
|
| 2015 |
Ross TG, Barrett CF, Soto Gomez M, Lam VKY, Henriquez CL, Les DH, Davis JI, Cuenca A, Petersen G, Seberg O, Thadeo M, Givnish TJ, Conran J, Stevenson DW, Graham SW. Plastid phylogenomics and molecular evolution of Alismatales Cladistics. DOI: 10.1111/Cla.12133 |
0.458 |
|
| 2015 |
Petersen G, Seberg O, Cuenca A, Stevenson DW, Thadeo M, Davis JI, Graham S, Ross TG. Phylogeny of the Alismatales (Monocotyledons) and the relationship of Acorus (Acorales?) Cladistics. DOI: 10.1111/Cla.12120 |
0.462 |
|
| 2015 |
Iles WJD, Smith SY, Gandolfo MA, Graham SW. Monocot fossils suitable for molecular dating analyses Botanical Journal of the Linnean Society. 178: 346-374. DOI: 10.1111/Boj.12233 |
0.477 |
|
| 2014 |
Chang Y, Graham SW. Patterns of clade support across the major lineages of moss phylogeny. Cladistics : the International Journal of the Willi Hennig Society. 30: 590-606. PMID 34794252 DOI: 10.1111/cla.12066 |
0.589 |
|
| 2014 |
Matasci N, Hung LH, Yan Z, Carpenter EJ, Wickett NJ, Mirarab S, Nguyen N, Warnow T, Ayyampalayam S, Barker M, Burleigh JG, Gitzendanner MA, Wafula E, Der JP, dePamphilis CW, ... ... Graham SW, et al. Data access for the 1,000 Plants (1KP) project. Gigascience. 3: 17. PMID 25625010 DOI: 10.1186/2047-217X-3-17 |
0.482 |
|
| 2014 |
Wickett NJ, Mirarab S, Nguyen N, Warnow T, Carpenter E, Matasci N, Ayyampalayam S, Barker MS, Burleigh JG, Gitzendanner MA, Ruhfel BR, Wafula E, Der JP, Graham SW, Mathews S, et al. Phylotranscriptomic analysis of the origin and early diversification of land plants. Proceedings of the National Academy of Sciences of the United States of America. 111: E4859-68. PMID 25355905 DOI: 10.1073/Pnas.1323926111 |
0.575 |
|
| 2014 |
Sessa EB, Banks JA, Barker MS, Der JP, Duffy AM, Graham SW, Hasebe M, Langdale J, Li FW, Marchant DB, Pryer KM, Rothfels CJ, Roux SJ, Salmi ML, Sigel EM, et al. Between two fern genomes. Gigascience. 3: 15. PMID 25324969 DOI: 10.1186/2047-217X-3-15 |
0.45 |
|
| 2014 |
Floyd SK, Ryan JG, Conway SJ, Brenner E, Burris KP, Burris JN, Chen T, Edger PP, Graham SW, Leebens-Mack JH, Pires JC, Rothfels CJ, Sigel EM, Stevenson DW, Neal Stewart C, et al. Origin of a novel regulatory module by duplication and degeneration of an ancient plant transcription factor. Molecular Phylogenetics and Evolution. 81: 159-73. PMID 25263420 DOI: 10.1016/J.Ympev.2014.06.017 |
0.472 |
|
| 2014 |
Percy DM, Argus GW, Cronk QC, Fazekas AJ, Kesanakurti PR, Burgess KS, Husband BC, Newmaster SG, Barrett SC, Graham SW. Understanding the spectacular failure of DNA barcoding in willows (Salix): does this result from a trans-specific selective sweep? Molecular Ecology. 23: 4737-56. PMID 24944007 DOI: 10.1111/Mec.12837 |
0.806 |
|
| 2014 |
Iles WJ, Lee C, Sokoloff DD, Remizowa MV, Yadav SR, Barrett MD, Barrett RL, Macfarlane TD, Rudall PJ, Graham SW. Reconstructing the age and historical biogeography of the ancient flowering-plant family Hydatellaceae (Nymphaeales). Bmc Evolutionary Biology. 14: 102. PMID 24884487 DOI: 10.1186/1471-2148-14-102 |
0.82 |
|
| 2014 |
Bennett T, Brockington SF, Rothfels C, Graham SW, Stevenson D, Kutchan T, Rolf M, Thomas P, Wong GK, Leyser O, Glover BJ, Harrison CJ. Paralogous radiations of PIN proteins with multiple origins of noncanonical PIN structure. Molecular Biology and Evolution. 31: 2042-60. PMID 24758777 DOI: 10.1093/Molbev/Msu147 |
0.428 |
|
| 2014 |
Li FW, Villarreal JC, Kelly S, Rothfels CJ, Melkonian M, Frangedakis E, Ruhsam M, Sigel EM, Der JP, Pittermann J, Burge DO, Pokorny L, Larsson A, Chen T, Weststrand S, ... ... Graham SW, et al. Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns. Proceedings of the National Academy of Sciences of the United States of America. 111: 6672-7. PMID 24733898 DOI: 10.1073/Pnas.1319929111 |
0.463 |
|
| 2014 |
Chang Y, Graham SW. Patterns of clade support across the major lineages of moss phylogeny Cladistics. 30: 590-606. DOI: 10.1111/Cla.12066 |
0.635 |
|
| 2013 |
Rothfels CJ, Larsson A, Li FW, Sigel EM, Huiet L, Burge DO, Ruhsam M, Graham SW, Stevenson DW, Wong GK, Korall P, Pryer KM. Transcriptome-mining for single-copy nuclear markers in ferns. Plos One. 8: e76957. PMID 24116189 DOI: 10.1371/Journal.Pone.0076957 |
0.565 |
|
| 2012 |
Johnson MT, Carpenter EJ, Tian Z, Bruskiewich R, Burris JN, Carrigan CT, Chase MW, Clarke ND, Covshoff S, Depamphilis CW, Edger PP, Goh F, Graham S, Greiner S, Hibberd JM, et al. Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes. Plos One. 7: e50226. PMID 23185583 DOI: 10.1371/Journal.Pone.0050226 |
0.367 |
|
| 2012 |
Iles WJ, Rudall PJ, Sokoloff DD, Remizowa MV, Macfarlane TD, Logacheva MD, Graham SW. Molecular phylogenetics of Hydatellaceae (Nymphaeales): sexual-system homoplasy and a new sectional classification. American Journal of Botany. 99: 663-76. PMID 22473977 DOI: 10.3732/Ajb.1100524 |
0.818 |
|
| 2011 |
Hollingsworth PM, Graham SW, Little DP. Choosing and using a plant DNA barcode. Plos One. 6: e19254. PMID 21637336 DOI: 10.1371/Journal.Pone.0019254 |
0.464 |
|
| 2011 |
Ness RW, Graham SW, Barrett SC. Reconciling gene and genome duplication events: using multiple nuclear gene families to infer the phylogeny of the aquatic plant family Pontederiaceae. Molecular Biology and Evolution. 28: 3009-18. PMID 21633114 DOI: 10.1093/Molbev/Msr119 |
0.712 |
|
| 2011 |
Chang Y, Graham SW. Inferring the higher-order phylogeny of mosses (Bryophyta) and relatives using a large, multigene plastid data set. American Journal of Botany. 98: 839-49. PMID 21613185 DOI: 10.3732/Ajb.0900384 |
0.657 |
|
| 2011 |
Chang Y, Graham SW. Bryophyte-specific primers for retrieving plastid genes suitable for phylogenetic inference. American Journal of Botany. 98: e109-13. PMID 21613174 DOI: 10.3732/Ajb.1000321 |
0.617 |
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| 2011 |
Kesanakurti PR, Fazekas AJ, Burgess KS, Percy DM, Newmaster SG, Graham SW, Barrett SC, Hajibabaei M, Husband BC. Spatial patterns of plant diversity below-ground as revealed by DNA barcoding. Molecular Ecology. 20: 1289-302. PMID 21255172 DOI: 10.1111/J.1365-294X.2010.04989.X |
0.821 |
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| 2011 |
Burgess KS, Fazekas AJ, Kesanakurti PR, Graham SW, Husband BC, Newmaster SG, Percy DM, Hajibabaei M, Barrett SCH. Discriminating plant species in a local temperate flora using the rbcL+matK DNA barcode Methods in Ecology and Evolution. 2: 333-340. DOI: 10.1111/J.2041-210X.2011.00092.X |
0.812 |
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| 2010 |
Rai HS, Graham SW. Utility of a large, multigene plastid data set in inferring higher-order relationships in ferns and relatives (monilophytes). American Journal of Botany. 97: 1444-56. PMID 21616899 DOI: 10.3732/Ajb.0900305 |
0.496 |
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| 2010 |
Givnish TJ, Ames M, McNeal JR, McKain MR, Steele PR, Depamphilis CW, Graham SW, Pires JC, Stevenson DW, Zomlefer WB, Briggs BG, Duvall MR, Moore MJ, Heaney JM, Soltis DE, et al. Assembling the tree of the monocotyledons: Plastome sequence phylogeny and evolution of Poales Annals of the Missouri Botanical Garden. 97: 584-616. DOI: 10.3417/2010023 |
0.512 |
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| 2009 |
Graham SW, Iles WJ. Different gymnosperm outgroups have (mostly) congruent signal regarding the root of flowering plant phylogeny. American Journal of Botany. 96: 216-27. PMID 21628185 DOI: 10.3732/Ajb.0800320 |
0.819 |
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| 2009 |
Stockey RA, Graham SW, Crane PR. Introduction to the Darwin special issue: The abominable mystery1. American Journal of Botany. 96: 3-4. PMID 21628173 DOI: 10.3732/Ajb.0800402 |
0.434 |
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| 2009 |
Fazekas AJ, Kesanakurti PR, Burgess KS, Percy DM, Graham SW, Barrett SC, Newmaster SG, Hajibabaei M, Husband BC. Are plant species inherently harder to discriminate than animal species using DNA barcoding markers? Molecular Ecology Resources. 9: 130-9. PMID 21564972 DOI: 10.1111/J.1755-0998.2009.02652.X |
0.828 |
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| 2009 |
Hollingsworth PM, Forrest LL, Spouge JL, Hajibabaei M, Ratnasingham S, van der Bank M, Chase MW, Cowan RS, Erickson DL, Fazekas AJ, Graham SW, James KE, Kim KJ, John Kress W, Schneider H, et al. A DNA barcode for land plants Proceedings of the National Academy of Sciences of the United States of America. 106: 12794-12797. PMID 19666622 DOI: 10.1073/Pnas.0905845106 |
0.815 |
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| 2008 |
Fazekas AJ, Burgess KS, Kesanakurti PR, Graham SW, Newmaster SG, Husband BC, Percy DM, Hajibabaei M, Barrett SC. Multiple multilocus DNA barcodes from the plastid genome discriminate plant species equally well. Plos One. 3: e2802. PMID 18665273 DOI: 10.1371/Journal.Pone.0002802 |
0.837 |
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| 2008 |
Zgurski JM, Rai HS, Fai QM, Bogler DJ, Francisco-Ortega J, Graham SW. How well do we understand the overall backbone of cycad phylogeny? New insights from a large, multigene plastid data set. Molecular Phylogenetics and Evolution. 47: 1232-7. PMID 18424186 DOI: 10.1016/J.Ympev.2008.03.002 |
0.344 |
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| 2008 |
Bruneau A, Graham SW. Plant systematics at the species level | La systématique des plantes au niveau de l'espèce Botany. 86: vii. DOI: 10.1139/B08-910 |
0.442 |
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| 2008 |
Graham SW, Bruneau A. The state of plant systematics research | L'état de la systématique des plantes Botany. 86: vii-x. DOI: 10.1139/B08-905 |
0.372 |
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| 2008 |
Case AL, Graham SW, Macfarlane TD, Barrett SCH. A phylogenetic study of evolutionary transitions in sexual systems in Australasian Wurmbea (Colchicaceae) International Journal of Plant Sciences. 169: 141-156. DOI: 10.1086/523368 |
0.733 |
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| 2007 |
Saarela JM, Rai HS, Doyle JA, Endress PK, Mathews S, Marchant AD, Briggs BG, Graham SW. Hydatellaceae identified as a new branch near the base of the angiosperm phylogenetic tree. Nature. 446: 312-5. PMID 17361182 DOI: 10.1038/Nature05612 |
0.828 |
|
| 2007 |
Saarela J, Peterson P, Keane R, Cayouette J, Graham S. Molecular Phylogenetics of Bromus (Poaceae: Pooideae) Based on Chloroplast and Nuclear DNA Sequence Data Aliso. 23: 450-467. DOI: 10.5642/Aliso.20072301.35 |
0.51 |
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| 2007 |
Cantino PD, Doyle JA, Graham SW, Judd WS, Olmstead RG, Soltis DE, Soltis PS, Donoghue MJ. Towards a phylogenetic nomenclature of Tracheophyta Taxon. 56: 822-846. DOI: 10.2307/25065864 |
0.491 |
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| 2006 |
Chase M, Fay M, Devey D, Maurin O, Rønsted N, Davies J, Pillon Y, Peterson G, Tamura M, Asmussen C, Hilu K, Borsch T, Davis J, Stevenson D, Pires C, ... ... Graham S, et al. Multigene Analyses of Monocot Relationships Aliso. 22: 63-75. DOI: 10.5642/Aliso.20062201.06 |
0.473 |
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| 2006 |
Givnish T, Pires C, Graham S, McPherson M, Prince L, Patterson T, Rai, H, Roalson E, Evans T, Hahn W, Millam K, Meerow A, Molvray M, Kores P, et al. Phylogenetic Relationships of Monocots Based on the Highly Informative Plastid Gene ndhF Aliso. 22: 28-51. DOI: 10.5642/Aliso.20062201.04 |
0.497 |
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| 2005 |
Givnish TJ, Pires JC, Graham SW, McPherson MA, Prince LM, Patterson TB, Rai HS, Roalson EH, Evans TM, Hahn WJ, Millam KC, Meerow AW, Molvray M, Kores PJ, O'Brien HE, et al. Repeated evolution of net venation and fleshy fruits among monocots in shaded habitats confirms a priori predictions: evidence from an ndhF phylogeny. Proceedings. Biological Sciences / the Royal Society. 272: 1481-90. PMID 16011923 DOI: 10.1098/Rspb.2005.3067 |
0.365 |
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| 2004 |
Graham SW, Barrett SC. Phylogenetic reconstruction of the evolution of stylar polymorphisms in Narcissus (Amaryllidaceae). American Journal of Botany. 91: 1007-21. PMID 21653457 DOI: 10.3732/Ajb.91.7.1007 |
0.638 |
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| 2004 |
Piercey MM, Graham SW, Currah RS. Patterns of genetic variation in Phialocephala fortinii across a broad latitudinal transect in Canada. Mycological Research. 108: 955-64. PMID 15449601 DOI: 10.1017/S0953756204000528 |
0.406 |
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| 2004 |
Graham SW, Cronk QC. The imbalanced supertree of flowering-plant phylogeny. Genome Biology. 5: 236. PMID 15287967 DOI: 10.1186/Gb-2004-5-8-236 |
0.509 |
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| 2004 |
McPherson MA, Fay MF, Chase MW, Graham SW. Parallel loss of a slowly evolving intron from two closely related families in Asparagales Systematic Botany. 29: 296-307. DOI: 10.1600/036364404774195494 |
0.471 |
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| 2003 |
Rai HS, O'Brien HE, Reeves PA, Olmstead RG, Graham SW. Inference of higher-order relationships in the cycads from a large chloroplast data set. Molecular Phylogenetics and Evolution. 29: 350-9. PMID 13678689 DOI: 10.1016/S1055-7903(03)00131-3 |
0.578 |
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| 2003 |
Thien LB, Sage TL, Jaffré T, Bernhardt P, Pontieri V, Weston PH, Malloch D, Azuma H, Graham SW, McPherson MA, Rai HS, Sage RF, Dupre JL. The population structure and floral biology of Amborella trichopoda (Amborellaceae) Annals of the Missouri Botanical Garden. 90: 466-490. DOI: 10.2307/3298537 |
0.372 |
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| 2002 |
Graham SW, Olmstead RG, Barrett SC. Rooting phylogenetic trees with distant outgroups: a case study from the commelinoid monocots. Molecular Biology and Evolution. 19: 1769-81. PMID 12270903 DOI: 10.1093/Oxfordjournals.Molbev.A003999 |
0.647 |
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| 2001 |
Maier SA, Podemski L, Graham SW, McDermid HE, Locke J. Characterization of the adenosine deaminase-related growth factor (ADGF) gene family in Drosophila. Gene. 280: 27-36. PMID 11738815 DOI: 10.1016/S0378-1119(01)00762-4 |
0.373 |
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| 2000 |
Graham SW, Olmstead RG. Utility of 17 chloroplast genes for inferring the phylogeny of the basal angiosperms. American Journal of Botany. 87: 1712-30. PMID 11080123 DOI: 10.2307/2656749 |
0.524 |
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| 2000 |
Graham SW, Olmstead RG. Evolutionary significance of an unusual chloroplast DNA inversion found in two basal angiosperm lineages. Current Genetics. 37: 183-8. PMID 10794175 DOI: 10.1007/S002940050517 |
0.408 |
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| 2000 |
Graham SW, Reeves PA, Burns ACE, Olmstead RG. Microstructural changes in noncoding chloroplast DNA: Interpretation, evolution, and utility of indels and inversions in basal angiosperm phylogenetic inference International Journal of Plant Sciences. 161: S83-S96. DOI: 10.1086/317583 |
0.453 |
|
| 1998 |
Graham SW, Kohn JR, Morton BR, Eckenwalder JE, Barrett SC. Phylogenetic congruence and discordance among one morphological and three molecular data sets from Pontederiaceae. Systematic Biology. 47: 545-67. PMID 12066301 DOI: 10.1080/106351598260572 |
0.775 |
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| 1996 |
Kohn JR, Graham SW, Morton B, Doyle JJ, Barrett SCH. RECONSTRUCTION OF THE EVOLUTION OF REPRODUCTIVE CHARACTERS IN PONTEDERIACEAE USING PHYLOGENETIC EVIDENCE FROM CHLOROPLAST DNA RESTRICTION-SITE VARIATION. Evolution; International Journal of Organic Evolution. 50: 1454-1469. PMID 28565710 DOI: 10.1111/J.1558-5646.1996.Tb03919.X |
0.729 |
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| 1996 |
Kohn JR, Graham SW, Morton B, Doyle JJ, Barrett SCH. Reconstruction of the evolution of reproductive characters in Pontederiaceae using phylogenetic evidence from chloroplast DNA restriction- site variation Evolution. 50: 1454-1469. |
0.661 |
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