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Ellie Armstrong - Publications

Affiliations: 
2016- Biology Stanford University, Palo Alto, CA 
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21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Armstrong EE, Bissell KL, Fatima HS, Heikkinen MA, Jessup A, Junaid MO, Lee DH, Lieb EC, Liem JT, Martin EM, Moreno M, Otgonbayar K, Romans BW, Royar K, Adler MB, et al. Chromosome-level assembly of the gray fox (Urocyon cinereoargenteus) confirms the basal loss of PRDM9 in Canidae. G3 (Bethesda, Md.). PMID 38366575 DOI: 10.1093/g3journal/jkae034  0.75
2023 Schiebelhut LM, Guillaume AS, Kuhn A, Schweizer RM, Armstrong EE, Beaumont MA, Byrne M, Cosart T, Hand BK, Howard L, Mussmann SM, Narum SR, Rasteiro R, Rivera-Colón AG, Saarman N, et al. Genomics and conservation: Guidance from training to analyses and applications. Molecular Ecology Resources. PMID 37966259 DOI: 10.1111/1755-0998.13893  0.504
2023 Peláez JN, Gloss AD, Goldman-Huertas B, Kim B, Lapoint RT, Pimentel-Solorio G, Verster KI, Aguilar JM, Nelson Dittrich AC, Singhal M, Suzuki HC, Matsunaga T, Armstrong EE, Charboneau JLM, Groen SC, et al. Evolution of chemosensory and detoxification gene families across herbivorous Drosophilidae. G3 (Bethesda, Md.). PMID 37317982 DOI: 10.1093/g3journal/jkad133  0.364
2023 Prado NA, Armstrong EE, Brown JL, Goldenberg SZ, Leimgruber P, Pearson VR, Maldonado JE, Campana MG. Genomic Resources for Asian (Elephas maximus) and African Savannah Elephant (Loxodonta africana) Conservation and Health Research. The Journal of Heredity. PMID 37246890 DOI: 10.1093/jhered/esad034  0.537
2023 Pelaez JN, Gloss AD, Goldman-Huertas B, Kim B, Lapoint RT, Pimentel-Solorio G, Verster KI, Aguilar JM, Dittrich ACN, Singhal M, Suzuki HC, Matsunaga T, Armstrong EE, Charboneau JLM, Groen SC, et al. Evolution of chemosensory and detoxification gene families across herbivorous Drosophilidae. Biorxiv : the Preprint Server For Biology. PMID 36993186 DOI: 10.1101/2023.03.16.532987  0.356
2022 Armstrong EE, Campana MG, Solari KA, Morgan SR, Ryder OA, Naude VN, Samelius G, Sharma K, Hadly EA, Petrov DA. Genome Report: Chromosome-level draft assemblies of the snow leopard, African leopard, and tiger (Panthera uncia, Panthera pardus pardus, and Panthera tigris). G3 (Bethesda, Md.). PMID 36250809 DOI: 10.1093/g3journal/jkac277  0.746
2022 Armstrong EE, Perry BW, Huang Y, Garimella KV, Jansen HT, Robbins CT, Tucker NR, Kelley JL. A beary good genome: Haplotype-resolved, chromosome-level assembly of the brown bear (Ursus arctos). Genome Biology and Evolution. PMID 35929770 DOI: 10.1093/gbe/evac125  0.619
2022 Kim BY, Wang JR, Miller DE, Barmina O, Delaney E, Thompson A, Comeault AA, Peede D, D'Agostino ERR, Pelaez J, Aguilar JM, Haji D, Matsunaga T, Armstrong E, Zych M, et al. Correction: Highly contiguous assemblies of 101 drosophilid genomes. Elife. 11. PMID 35302486 DOI: 10.7554/eLife.78579  0.659
2021 Cerca J, Armstrong EE, Vizueta J, Fernández R, Dimitrov D, Petersen B, Prost S, Rozas J, Petrov D, Gillespie RG. The Tetragnatha kauaiensis genome sheds light on the origins of genomic novelty in spiders. Genome Biology and Evolution. PMID 34849853 DOI: 10.1093/gbe/evab262  0.714
2021 Suvorov A, Kim BY, Wang J, Armstrong EE, Peede D, D'Agostino ERR, Price DK, Waddell P, Lang M, Courtier-Orgogozo V, David JR, Petrov D, Matute DR, Schrider DR, Comeault AA. Widespread introgression across a phylogeny of 155 Drosophila genomes. Current Biology : Cb. PMID 34788634 DOI: 10.1016/j.cub.2021.10.052  0.706
2021 Kardos M, Armstrong EE, Fitzpatrick SW, Hauser S, Hedrick PW, Miller JM, Tallmon DA, Funk WC. The crucial role of genome-wide genetic variation in conservation. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34772759 DOI: 10.1073/pnas.2104642118  0.6
2021 Bentley BP, Armstrong EE. Good from far, but far from good: The impact of a reference genome on evolutionary inference. Molecular Ecology Resources. PMID 34670016 DOI: 10.1111/1755-0998.13531  0.632
2021 Kim BY, Wang J, Miller DE, Barmina O, Delaney EK, Thompson A, Comeault AA, Peede D, D'Agostino ER, Pelaez J, Aguilar JM, Haji D, Matsunaga T, Armstrong E, Zych M, et al. Highly contiguous assemblies of 101 drosophilid genomes. Elife. 10. PMID 34279216 DOI: 10.7554/eLife.66405  0.721
2021 Armstrong EE, Khan A, Taylor RW, Gouy A, Greenbaum G, Thiéry A, Kang JTL, Redondo SA, Prost S, Barsh G, Kaelin C, Phalke S, Chugani A, Gilbert M, Miquelle D, et al. Recent evolutionary history of tigers highlights contrasting roles of genetic drift and selection. Molecular Biology and Evolution. PMID 33592092 DOI: 10.1093/molbev/msab032  0.475
2020 Armstrong EE, Taylor RW, Miller DE, Kaelin CB, Barsh GS, Hadly EA, Petrov D. Long live the king: chromosome-level assembly of the lion (Panthera leo) using linked-read, Hi-C, and long-read data. Bmc Biology. 18: 3. PMID 31915011 DOI: 10.1186/S12915-019-0734-5  0.738
2019 Prost S, Armstrong EE, Nylander J, Thomas GWC, Suh A, Petersen B, Dalen L, Benz BW, Blom MPK, Palkopoulou E, Ericson PGP, Irestedt M. Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise. Gigascience. PMID 30689847 DOI: 10.1093/Gigascience/Giz003  0.594
2018 Armstrong EE, Taylor RW, Prost S, Blinston P, van der Meer E, Madzikanda H, Mufute O, Mandisodza-Chikerema R, Stuelpnagel J, Sillero-Zubiri C, Petrov D. Cost-effective assembly of the African wild dog (Lycaon pictus) genome using linked reads. Gigascience. PMID 30346553 DOI: 10.1093/Gigascience/Giy124  0.762
2018 Armstrong EE, Prost S, Ertz D, Westberg M, Frisch A, Bendiksby M. Draft Genome Sequence and Annotation of the Lichen-Forming Fungus Arthonia radiata. Genome Announcements. 6. PMID 29622619 DOI: 10.1128/genomeA.00281-18  0.532
2018 Maas DL, Prost S, Bi K, Smith L, Armstrong EE, Aji LP, Toha AHA, Gillespie RG, Becking LE. Rapid divergence of mussel populations despite incomplete barriers to dispersal. Molecular Ecology. PMID 29575349 DOI: 10.1111/Mec.14556  0.388
2016 Sakai-Kawada FE, Yakym CJ, Helmkampf M, Hagiwara K, Ip CG, Antonio BJ, Armstrong E, Ulloa WJ, Awaya JD. Draft Genome Sequence of Marine Sponge Symbiont Pseudoalteromonas luteoviolacea IPB1, Isolated from Hilo, Hawaii. Genome Announcements. 4. PMID 27660784 DOI: 10.1128/Genomea.01002-16  0.508
2016 Rominger AJ, Goodman KR, Lim JY, Armstrong EE, Becking LE, Bennett GM, Brewer MS, Cotoras DD, Ewing CP, Harte J, Martinez ND, O'Grady PM, Percy DM, Price DK, Roderick GK, et al. Community assembly on isolated islands: macroecology meets evolution Global Ecology and Biogeography. 25: 769-780. DOI: 10.1111/Geb.12341  0.336
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