Tae-Hee Lee - Publications

Affiliations: 
Pennsylvania State University, State College, PA, United States 
Area:
Biophysical chemistry, biophysics
Website:
http://chem.psu.edu/directory/txl18

50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Das SK, Huynh MT, Gao J, Sengupta B, Yadav SP, Lee TH. Methods to investigate nucleosome structure and dynamics with single-molecule FRET. Methods (San Diego, Calif.). 215: 17-27. PMID 37236433 DOI: 10.1016/j.ymeth.2023.05.003  0.714
2023 Huynh MT, Sengupta B, Krajewski WA, Lee TH. Effects of Histone H2B Ubiquitylations and H3K79me on Transcription Elongation. Acs Chemical Biology. PMID 36857155 DOI: 10.1021/acschembio.2c00887  0.69
2023 Huynh MT, Sengupta B, Krajewski WA, Lee TH. The Effects of Histone H2B ubiquitylations and H3K79me on Transcription Elongation. Biorxiv : the Preprint Server For Biology. PMID 36712011 DOI: 10.1101/2023.01.05.522859  0.69
2022 Sengupta B, Huynh M, Smith CB, McGinty RK, Krajewski W, Lee TH. The Effects of Histone H2B Ubiquitylations on the Nucleosome Structure and Internucleosomal Interactions. Biochemistry. PMID 36112542 DOI: 10.1021/acs.biochem.2c00422  0.695
2021 Lerner E, Barth A, Hendrix J, Ambrose B, Birkedal V, Blanchard SC, Börner R, Sung Jung H, Cordes T, Craggs TD, Deniz AA, Diao J, Fei J, Gonzalez RL, Gopich IV, ... ... Lee TH, et al. FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices. Elife. 10. PMID 33779550 DOI: 10.7554/eLife.60416  0.536
2020 Li M, Sengupta B, Benkovic SJ, Lee TH, Hedglin M. PCNA Monoubiquitination Is Regulated by Diffusion of Rad6/Rad18 Complexes along RPA Filaments. Biochemistry. PMID 33242956 DOI: 10.1021/acs.biochem.0c00849  0.686
2016 Kim J, Wei S, Lee J, Yue H, Lee TH. Single Molecule Observation Reveals Spontaneous Protein Dynamics in the Nucleosome. The Journal of Physical Chemistry. B. PMID 27487198 DOI: 10.1021/Acs.Jpcb.6B06235  0.367
2016 Fang H, Wei S, Lee TH, Hayes JJ. Chromatin structure-dependent conformations of the H1 CTD. Nucleic Acids Research. PMID 27365050 DOI: 10.1093/Nar/Gkw586  0.322
2016 Yue H, Fang H, Wei S, Hayes JJ, Lee TH. Single Molecule Studies on the Linker Histone H1 Binding to DNA and the Nucleosome. Biochemistry. PMID 27010485 DOI: 10.1021/Acs.Biochem.5B01247  0.329
2016 Falk SJ, Lee J, Sekulic N, Sennett MA, Lee TH, Black BE. CENP-C directs a structural transition of CENP-A nucleosomes mainly through sliding of DNA gyres. Nature Structural & Molecular Biology. PMID 26878239 DOI: 10.1038/Nsmb.3175  0.361
2016 Wei S, Kim J, Lee J, Lee T. A Hybrid Single Molecule Method to Investigate Sub-Nanometer Dynamics of DNA and Protein at a sub-ms Resolution Biophysical Journal. 110: 635a. DOI: 10.1016/J.Bpj.2015.11.3400  0.333
2015 Oh JH, Lee TH, Kim HS, Jung CS, Lee JS, Hong SJ, Jin SY. Esophageal Involvement of Immunoglobulin G4-Related Disease: A Case Report and Literature Review. Medicine. 94: e2122. PMID 26683918 DOI: 10.1097/MD.0000000000002122  0.334
2015 Park SK, Hong SJ, Han JP, Goong HJ, Kim HS, Myung YS, Kim SH, Jung HJ, Lee TH, Lee JS, Lee MS. Changes in pressure waves after endoscopic intervention in patients with achalasia: A focus on peristaltic recovery of the esophageal body. The Turkish Journal of Gastroenterology : the Official Journal of Turkish Society of Gastroenterology. PMID 26674979 DOI: 10.5152/tjg.2015.150271  0.323
2015 Park WY, Lee TH, Lee JS, Hong SJ, Jeon SR, Kim HG, Cho JY, Kim JO, Cho JH, Lee SW, Cho YK. Reappraisal of Pneumoperitoneum After Percutaneous Endoscopic Gastrostomy. Intestinal Research. 13: 313-317. PMID 26576136 DOI: 10.5217/ir.2015.13.4.313  0.338
2015 Kim J, Lee J, Lee TH. Lysine Acetylation Facilitates Spontaneous DNA Dynamics in the Nucleosome. The Journal of Physical Chemistry. B. PMID 26575591 DOI: 10.1021/Acs.Jpcb.5B09734  0.37
2015 Wei S, Falk SJ, Black BE, Lee TH. A novel hybrid single molecule approach reveals spontaneous DNA motion in the nucleosome. Nucleic Acids Research. PMID 26013809 DOI: 10.1093/Nar/Gkv549  0.375
2015 Lee JY, Lee J, Yue H, Lee TH. Dynamics of nucleosome assembly and effects of DNA methylation. The Journal of Biological Chemistry. 290: 4291-303. PMID 25550164 DOI: 10.1074/Jbc.M114.619213  0.352
2014 Dhall A, Wei S, Fierz B, Woodcock CL, Lee TH, Chatterjee C. Sumoylated human histone H4 prevents chromatin compaction by inhibiting long-range internucleosomal interactions. The Journal of Biological Chemistry. 289: 33827-37. PMID 25294883 DOI: 10.1074/Jbc.M114.591644  0.337
2013 Wang L, Xu X, Kumar R, Maiti B, Liu CT, Ivanov I, Lee TH, Benkovic SJ. Probing DNA clamps with single-molecule force spectroscopy. Nucleic Acids Research. 41: 7804-14. PMID 23783571 DOI: 10.1093/Nar/Gkt487  0.342
2013 Perumal SK, Ren W, Lee TH, Benkovic SJ. How a holoenzyme for DNA replication is formed. Proceedings of the National Academy of Sciences of the United States of America. 110: 99-104. PMID 23248268 DOI: 10.1073/Pnas.1212748110  0.309
2013 Wei S, Lee JY, Lee T. Internucleosomal Interactions Monitored at a Single Molecule Level Biophysical Journal. 104. DOI: 10.1016/J.Bpj.2012.11.2847  0.37
2012 Choy JS, Lee TH. Structural dynamics of nucleosomes at single-molecule resolution. Trends in Biochemical Sciences. 37: 425-35. PMID 22831768 DOI: 10.1016/J.Tibs.2012.06.006  0.388
2012 Lee JY, Lee T. Effects of histone acetylation and CpG methylation on the structure of nucleosomes Biochimica Et Biophysica Acta. 1824: 974-982. PMID 22627143 DOI: 10.1016/J.Bbapap.2012.05.006  0.36
2012 Lee JY, Lee T. Effects of DNA methylation on the structure of nucleosomes Journal of the American Chemical Society. 134: 173-175. PMID 22148575 DOI: 10.1021/Ja210273W  0.338
2012 Lee JY, Wei S, Lee T. Effects of Covalent Modifications on the Structure and Assembly of Nucleosomes Biophysical Journal. 102. DOI: 10.1016/J.Bpj.2011.11.2635  0.365
2012 Lee J, Lee T. Effects of CpG Methylation on the Structure and Assembly of a Nucleosome Biophysical Journal. 102. DOI: 10.1016/J.Bpj.2011.11.2634  0.343
2011 Lee JY, Wei S, Lee T. Effects of Histone Acetylation by Piccolo NuA4 on the Structure of a Nucleosome and the Interactions between Two Nucleosomes Journal of Biological Chemistry. 286: 11099-11109. PMID 21282115 DOI: 10.1074/Jbc.M110.192047  0.344
2011 Lee J, Wei S, Lee T. Effect of Histone Acetylation on the Intra- and Inter-Nucleosomal Dynamics Biophysical Journal. 100. DOI: 10.1016/J.Bpj.2010.12.575  0.354
2011 Lee T, Benkovic S, Mishra P, Kumar R. Mechanism of Yeast Clamp Loading on DNA Biophysical Journal. 100: 239a. DOI: 10.1016/J.Bpj.2010.12.1525  0.672
2010 Mishra PP, Qureshi MT, Ren W, Lee TH. Codon-dependent tRNA fluctuations monitored with fluorescence polarization. Biophysical Journal. 99: 3849-58. PMID 21112310 DOI: 10.1016/J.Bpj.2010.10.026  0.678
2010 Kumar R, Nashine VC, Mishra PP, Benkovic SJ, Lee TH. Stepwise loading of yeast clamp revealed by ensemble and single-molecule studies. Proceedings of the National Academy of Sciences of the United States of America. 107: 19736-41. PMID 21041673 DOI: 10.1073/Pnas.1014139107  0.681
2010 Choy JS, Wei S, Lee JY, Tan S, Chu S, Lee TH. DNA methylation increases nucleosome compaction and rigidity. Journal of the American Chemical Society. 132: 1782-3. PMID 20095602 DOI: 10.1021/Ja910264Z  0.493
2010 Wei S, Lee J, Lee T. DNA Methylation Induces a More Compact and Rigid Nucleosome Structure Biophysical Journal. 98: 4-5. DOI: 10.1016/J.Bpj.2009.12.2586  0.351
2010 Mishra PP, Ren W, Qureshi MT, Lee T. Fluctuating tRNA Guided by Induced Fit as a Basis of High Fidelity Translation by the Ribosome Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.1414  0.68
2007 Lee TH, Blanchard SC, Kim HD, Puglisi JD, Chu S. The role of fluctuations in tRNA selection by the ribosome. Proceedings of the National Academy of Sciences of the United States of America. 104: 13661-5. PMID 17699629 DOI: 10.1073/Pnas.0705988104  0.595
2007 Uemura S, Dorywalska M, Lee TH, Kim HD, Puglisi JD, Chu S. Peptide bond formation destabilizes Shine-Dalgarno interaction on the ribosome. Nature. 446: 454-7. PMID 17377584 DOI: 10.1038/Nature05625  0.566
2007 Lee TH, Lapidus LJ, Zhao W, Travers KJ, Herschlag D, Chu S. Measuring the folding transition time of single RNA molecules. Biophysical Journal. 92: 3275-83. PMID 17307831 DOI: 10.1529/Biophysj.106.094623  0.417
2006 Uemura S, Dorywalska M, Lee T, Kim H, Puglisi J, Chu S. 1P557 Peptide bond formation induces the breakage of Shine-Dalgarno interaction on the ribosome(26. Single molecule biophysics,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006) Seibutsu Butsuri. 46: S286. DOI: 10.2142/Biophys.46.S286_1  0.565
2005 Lee TH, Gonzalez JI, Zheng J, Dickson RM. Single-molecule optoelectronics. Accounts of Chemical Research. 38: 534-41. PMID 16028887 DOI: 10.1021/Ar040146T  0.571
2005 Peyser-Capadona L, Capadona LP, Zheng J, González JI, Lee TH, Patel SA, Dickson RM. Nanoparticle-free single molecule anti-stokes Raman spectroscopy. Physical Review Letters. 94: 058301. PMID 15783704 DOI: 10.1103/Physrevlett.94.058301  0.526
2004 Gonzalez JI, Lee TH, Barnes MD, Antoku Y, Dickson RM. Quantum mechanical single-gold-nanocluster electroluminescent light source at room temperature. Physical Review Letters. 93: 147402. PMID 15524840 DOI: 10.1103/Physrevlett.93.147402  0.737
2004 Kumar P, Lee TH, Mehta A, Sumpter BG, Dickson RM, Barnes MD. Photon antibunching from oriented semiconducting polymer nanostructures. Journal of the American Chemical Society. 126: 3376-7. PMID 15025436 DOI: 10.1021/Ja031921N  0.567
2004 Lee T, Dickson RM. Nanocomputing With Nanoclusters Optics and Photonics News. 15: 22. DOI: 10.1364/Opn.15.6.000022  0.548
2004 Gonzalez JI, Lee T, Barnes MD, Antoku Y, Dickson RM. Publisher's Note: Quantum Mechanical Single-Gold-Nanocluster Electroluminescent Light Source at Room Temperature [Phys. Rev. Lett.93, 147402 (2004)] Physical Review Letters. 93. DOI: 10.1103/Physrevlett.93.159903  0.724
2004 Lee T, Kumar P, Mehta A, Xu K, Dickson RM, Barnes MD. Oriented semiconducting polymer nanostructures as on-demand room-temperature single-photon sources Applied Physics Letters. 85: 100-102. DOI: 10.1063/1.1768301  0.579
2004 Lee T, Hladik CR, Dickson RM. Facile, on-demand electronic nanodevice fabrication from photo- and electro-active silver oxide Applied Physics Letters. 84: 118-120. DOI: 10.1063/1.1638626  0.563
2003 Lee TH, Dickson RM. Discrete two-terminal single nanocluster quantum optoelectronic logic operations at room temperature. Proceedings of the National Academy of Sciences of the United States of America. 100: 3043-6. PMID 12621154 DOI: 10.1073/Pnas.0635474100  0.578
2003 Lee T, Hladik CR, Dickson RM. Asymmetric Photoconductivity within Nanoscale Break Junctions Nano Letters. 3: 1561-1564. DOI: 10.1021/Nl034732B  0.546
2002 Lee TH, Gonzalez JI, Dickson RM. Strongly enhanced field-dependent single-molecule electroluminescence. Proceedings of the National Academy of Sciences of the United States of America. 99: 10272-5. PMID 12149468 DOI: 10.1073/Pnas.162356799  0.605
2002 Peyser LA, Lee T, Dickson RM. Harnessing single-particle dynamics in silver nanomaterials High-Power Lasers and Applications. 4636: 81-87. DOI: 10.1117/12.459728  0.584
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