| Year |
Citation |
Score |
| 2023 |
Wang Z, Wang YW, Kasuga T, Lopez-Giraldez F, Zhang Y, Zhang Z, Wang Y, Dong C, Sil A, Trail F, Yarden O, Townsend JP. Lineage-specific genes are clustered with HET-domain genes and respond to environmental and genetic manipulations regulating reproduction in Neurospora. Plos Genetics. 19: e1011019. PMID 37934795 DOI: 10.1371/journal.pgen.1011019 |
0.69 |
|
| 2023 |
Wang Z, Wang YW, Kasuga T, Hassler H, Lopez-Giraldez F, Dong C, Yarden O, Townsend JP. Origins of lineage-specific elements via gene duplication, relocation, and regional rearrangement in Neurospora crassa. Molecular Ecology. PMID 37843462 DOI: 10.1111/mec.17168 |
0.721 |
|
| 2023 |
Wang Z, Kim W, Wang YW, Yakubovich E, Dong C, Trail F, Townsend JP, Yarden O. The Sordariomycetes: an expanding resource with Big Data for mining in evolutionary genomics and transcriptomics. Frontiers in Fungal Biology. 4: 1214537. PMID 37746130 DOI: 10.3389/ffunb.2023.1214537 |
0.312 |
|
| 2023 |
Miguel-Rojas C, Cavinder B, Townsend JP, Trail F. Comparative Transcriptomics of Fusarium graminearum and Magnaporthe oryzae Spore Germination Leading up To Infection. Mbio. e0244222. PMID 36598191 DOI: 10.1128/mbio.02442-22 |
0.31 |
|
| 2022 |
Dornburg A, Mallik R, Wang Z, Bernal MA, Thompson B, Bruford EA, Nebert DW, Vasiliou V, Yohe LR, Yoder JA, Townsend JP. Placing human gene families into their evolutionary context. Human Genomics. 16: 56. PMID 36369063 DOI: 10.1186/s40246-022-00429-5 |
0.35 |
|
| 2022 |
Gortikov M, Yakubovich E, Wang Z, López-Giráldez F, Tu Y, Townsend JP, Yarden O. Differential Expression of Cell Wall Remodeling Genes Is Part of the Dynamic Phase-Specific Transcriptional Program of Conidial Germination of . Journal of Fungi (Basel, Switzerland). 8. PMID 36012842 DOI: 10.3390/jof8080854 |
0.36 |
|
| 2022 |
Kim W, Wang Z, Kim H, Pham K, Tu Y, Townsend JP, Trail F. Transcriptional Divergence Underpinning Sexual Development in the Fungal Class Sordariomycetes. Mbio. e0110022. PMID 35638737 DOI: 10.1128/mbio.01100-22 |
0.53 |
|
| 2022 |
Wang Z, Lopez-Giraldez F, Slot J, Yarden O, Trail F, Townsend JP. Secondary Metabolism Gene Clusters Exhibit Increasingly Dynamic and Differential Expression during Asexual Growth, Conidiation, and Sexual Development in Neurospora crassa. Msystems. e0023222. PMID 35638725 DOI: 10.1128/msystems.00232-22 |
0.409 |
|
| 2022 |
Qing T, Mohsen H, Cannataro V, Marczyk M, Rozenblit M, Foldi J, Murray M, Townsend J, Kluger Y, Gerstein M, Pusztai L. Cancer Relevance of Human Genes. Journal of the National Cancer Institute. PMID 35417011 DOI: 10.1093/jnci/djac068 |
0.342 |
|
| 2020 |
Dornburg A, Wang Z, Wang J, Mo ES, Lopez-Giraldez F, Townsend JP. Comparative genomics within and across Bilaterians illuminates the evolutionary history of ALK and LTK proto-oncogene origination and diversification. Genome Biology and Evolution. PMID 33196781 DOI: 10.1093/gbe/evaa228 |
0.407 |
|
| 2020 |
Merényi Z, Prasanna AN, Wang Z, Kovács K, Hegedüs B, Bálint B, Papp B, Townsend JP, Nagy LG. Unmatched level of molecular convergence among deeply divergent complex multicellular fungi. Molecular Biology and Evolution. PMID 32191325 DOI: 10.1093/Molbev/Msaa077 |
0.361 |
|
| 2019 |
Johnston PR, Quijada L, Smith CA, Baral HO, Hosoya T, Baschien C, Pärtel K, Zhuang WY, Haelewaters D, Park D, Carl S, López-Giráldez F, Wang Z, Townsend JP. A multigene phylogeny toward a new phylogenetic classification of . Ima Fungus. 10: 1. PMID 32647610 DOI: 10.1186/s43008-019-0002-x |
0.383 |
|
| 2019 |
Wang Z, López-Giráldez F, Wang J, Trail F, Townsend JP. Integrative Activity of Mating Loci, Environmentally Responsive Genes, and Secondary Metabolism Pathways during Sexual Development of Chaetomium globosum. Mbio. 10. PMID 31822585 DOI: 10.1128/Mbio.02119-19 |
0.482 |
|
| 2019 |
Kim W, Cavinder B, Proctor RH, O'Donnell K, Townsend JP, Trail F. Comparative Genomics and Transcriptomics During Sexual Development Gives Insight Into the Life History of the Cosmopolitan Fungus . Frontiers in Microbiology. 10: 1247. PMID 31231336 DOI: 10.3389/Fmicb.2019.01247 |
0.418 |
|
| 2019 |
Wang Z, Miguel-Rojas C, Lopez-Giraldez F, Yarden O, Trail F, Townsend JP. Metabolism and Development during Conidial Germination in Response to a Carbon-Nitrogen-Rich Synthetic or a Natural Source of Nutrition in . Mbio. 10. PMID 30914504 DOI: 10.1128/Mbio.00192-19 |
0.375 |
|
| 2019 |
Claus E, Cannataro V, Gaffney S, Townsend J. EPID-26. SEX-SPECIFIC GLIOMA MOLECULAR SIGNATURES Neuro-Oncology. 21: vi80-vi80. DOI: 10.1093/Neuonc/Noz175.326 |
0.423 |
|
| 2018 |
Adhikarla H, Wunder EA, Mechaly AE, Mehta S, Wang Z, Santos L, Bisht V, Diggle P, Murray G, Adler B, Lopez F, Townsend JP, Groisman E, Picardeau M, Buschiazzo A, et al. Lvr, a Signaling System That Controls Global Gene Regulation and Virulence in Pathogenic. Frontiers in Cellular and Infection Microbiology. 8: 45. PMID 29600195 DOI: 10.3389/Fcimb.2018.00045 |
0.375 |
|
| 2018 |
Wang Z, Gudibanda A, Ugwuowo U, Trail F, Townsend JP. Using evolutionary genomics, transcriptomics, and systems biology to reveal gene networks underlying fungal development Fungal Biology Reviews. 32: 249-264. DOI: 10.1016/J.Fbr.2018.02.001 |
0.378 |
|
| 2017 |
Wang Z, Wang J, Li N, Li J, Trail F, Dunlap JC, Townsend JP. Light sensing by opsins and fungal ecology: NOP-1 modulates entry into sexual reproduction in response to environmental cues. Molecular Ecology. PMID 29134709 DOI: 10.1111/Mec.14425 |
0.315 |
|
| 2017 |
Zhao ZM, Campbell MC, Li N, Lee DSW, Zhang Z, Townsend JP. Detection of regional variation in selection intensity within protein-coding genes using DNA sequence polymorphism and divergence. Molecular Biology and Evolution. PMID 28962009 DOI: 10.1093/Molbev/Msx213 |
0.301 |
|
| 2017 |
Trail F, Wang Z, Stefanko K, Cubba C, Townsend JP. The ancestral levels of transcription and the evolution of sexual phenotypes in filamentous fungi. Plos Genetics. 13: e1006867. PMID 28704372 DOI: 10.1371/Journal.Pgen.1006867 |
0.517 |
|
| 2016 |
Wang Z, Li N, Li J, Dunlap JC, Trail F, Townsend JP. The Fast-Evolving phy-2 Gene Modulates Sexual Development in Response to Light in the Model Fungus Neurospora crassa. Mbio. 7. PMID 26956589 DOI: 10.1128/Mbio.02148-15 |
0.309 |
|
| 2016 |
Choi M, Kadara H, Zhang J, Cuentas EP, Canales JR, Gaffney SG, Zhao Z, Behrens C, Fujimoto J, Chow C, Kalhor N, Moran C, Rimm D, Swisher S, Gibbons DL, ... ... Townsend J, et al. Abstract 142: Mutation and immune profiles in early-stage lung squamous cell carcinoma Cancer Research. 76: 142-142. DOI: 10.1158/1538-7445.Am2016-142 |
0.315 |
|
| 2015 |
Sistrom M, Park D, O'Brien HE, Wang Z, Guttman DS, Townsend JP, Turner PE. Genomic and Gene-Expression Comparisons among Phage-Resistant Type-IV Pilus Mutants of Pseudomonas syringae pathovar phaseolicola. Plos One. 10: e0144514. PMID 26670219 DOI: 10.1371/Journal.Pone.0144514 |
0.37 |
|
| 2015 |
Hodgins-Davis A, Rice DP, Townsend JP. Gene Expression Evolves under a House-of-Cards Model of Stabilizing Selection. Molecular Biology and Evolution. 32: 2130-40. PMID 25901014 DOI: 10.1093/Molbev/Msv094 |
0.441 |
|
| 2014 |
Lehr NA, Wang Z, Li N, Hewitt DA, López-Giráldez F, Trail F, Townsend JP. Gene expression differences among three Neurospora species reveal genes required for sexual reproduction in Neurospora crassa. Plos One. 9: e110398. PMID 25329823 DOI: 10.1371/Journal.Pone.0110398 |
0.493 |
|
| 2014 |
Wang Z, Lopez-Giraldez F, Lehr N, Farré M, Common R, Trail F, Townsend JP. Global gene expression and focused knockout analysis reveals genes associated with fungal fruiting body development in Neurospora crassa. Eukaryotic Cell. 13: 154-69. PMID 24243796 DOI: 10.1128/Ec.00248-13 |
0.48 |
|
| 2014 |
Johannesson H, Townsend J, Taylor J. Concerted evolution of repeat units within the gene encoding an immunomodulating parasitic cell surface glycoprotein in the human pathogenic fungi Coccidioides immitis and C. posadasii F1000research. 5. DOI: 10.7490/F1000Research.1096506.1 |
0.53 |
|
| 2014 |
Claus EB, Calvocoressi L, Greenhalgh S, Walsh K, Schildkraut J, Bondy M, Wiemels J, Wrensch M, Al-Mefty O, Townsend J. GENETIC CHANGES IN RADIATION-ASSOCIATED MENINGIOMA Neuro-Oncology. 16: iii1-iii1. DOI: 10.1093/Neuonc/Nou206.2 |
0.308 |
|
| 2013 |
Binder M, Justo A, Riley R, Salamov A, Lopez-Giraldez F, Sjökvist E, Copeland A, Foster B, Sun H, Larsson E, Larsson KH, Townsend J, Grigoriev IV, Hibbett DS. Phylogenetic and phylogenomic overview of the Polyporales. Mycologia. 105: 1350-73. PMID 23935031 DOI: 10.3852/13-003 |
0.476 |
|
| 2013 |
López-Giráldez F, Moeller AH, Townsend JP. Evaluating phylogenetic informativeness as a predictor of phylogenetic signal for metazoan, fungal, and mammalian phylogenomic data sets. Biomed Research International. 2013: 621604. PMID 23878813 DOI: 10.1155/2013/621604 |
0.338 |
|
| 2013 |
Samils N, Gioti A, Karlsson M, Sun Y, Kasuga T, Bastiaans E, Wang Z, Li N, Townsend JP, Johannesson H. Sex-linked transcriptional divergence in the hermaphrodite fungus Neurospora tetrasperma. Proceedings. Biological Sciences / the Royal Society. 280: 20130862. PMID 23782882 DOI: 10.1098/Rspb.2013.0862 |
0.74 |
|
| 2012 |
Nygren K, Wallberg A, Samils N, Stajich JE, Townsend JP, Karlsson M, Johannesson H. Analyses of expressed sequence tags in Neurospora reveal rapid evolution of genes associated with the early stages of sexual reproduction in fungi. Bmc Evolutionary Biology. 12: 229. PMID 23186325 DOI: 10.1186/1471-2148-12-229 |
0.756 |
|
| 2012 |
Hodgins-Davis A, Adomas AB, Warringer J, Townsend JP. Abundant gene-by-environment interactions in gene expression reaction norms to copper within Saccharomyces cerevisiae. Genome Biology and Evolution. 4: 1061-79. PMID 23019066 DOI: 10.1093/Gbe/Evs084 |
0.41 |
|
| 2012 |
Sikhakolli UR, López-Giráldez F, Li N, Common R, Townsend JP, Trail F. Transcriptome analyses during fruiting body formation in Fusarium graminearum and Fusarium verticillioides reflect species life history and ecology. Fungal Genetics and Biology : Fg & B. 49: 663-73. PMID 22705880 DOI: 10.1016/J.Fgb.2012.05.009 |
0.377 |
|
| 2012 |
Wang Z, Kin K, López-Giráldez F, Johannesson H, Townsend JP. Sex-specific gene expression during asexual development of Neurospora crassa. Fungal Genetics and Biology : Fg & B. 49: 533-43. PMID 22626843 DOI: 10.1016/J.Fgb.2012.05.004 |
0.676 |
|
| 2012 |
Huang T, López-Giráldez F, Townsend JP, Irish VF. RBE controls microRNA164 expression to effect floral organogenesis. Development (Cambridge, England). 139: 2161-9. PMID 22573623 DOI: 10.1242/Dev.075069 |
0.311 |
|
| 2012 |
Wang Z, Lehr N, Trail F, Townsend JP. Differential impact of nutrition on developmental and metabolic gene expression during fruiting body development in Neurospora crassa. Fungal Genetics and Biology : Fg & B. 49: 405-13. PMID 22469835 DOI: 10.1016/J.Fgb.2012.03.004 |
0.338 |
|
| 2012 |
Zhang Z, Li J, Cui P, Ding F, Li A, Townsend JP, Yu J. Codon Deviation Coefficient: a novel measure for estimating codon usage bias and its statistical significance. Bmc Bioinformatics. 13: 43. PMID 22435713 DOI: 10.1186/1471-2105-13-43 |
0.316 |
|
| 2011 |
Moeller AH, Townsend JP. Phylogenetic informativeness profiling of 12 genes for 28 vertebrate taxa without divergence dates. Molecular Phylogenetics and Evolution. 60: 271-2. PMID 21558010 DOI: 10.1016/J.Ympev.2011.04.023 |
0.383 |
|
| 2011 |
Guo Z, Adomas AB, Jackson ED, Qin H, Townsend JP. SIR2 and other genes are abundantly expressed in long-lived natural segregants for replicative aging of the budding yeast Saccharomyces cerevisiae. Fems Yeast Research. 11: 345-55. PMID 21306556 DOI: 10.1111/J.1567-1364.2011.00723.X |
0.375 |
|
| 2010 |
Adomas AB, Lopez-Giraldez F, Clark TA, Wang Z, Townsend JP. Multi-targeted priming for genome-wide gene expression assays. Bmc Genomics. 11: 477. PMID 20716356 DOI: 10.1186/1471-2164-11-477 |
0.4 |
|
| 2010 |
Zhang Z, López-Giráldez F, Townsend JP. LOX: inferring Level Of eXpression from diverse methods of census sequencing. Bioinformatics (Oxford, England). 26: 1918-9. PMID 20538728 DOI: 10.1093/Bioinformatics/Btq303 |
0.362 |
|
| 2010 |
Zhang Z, Townsend JP. The filamentous fungal gene expression database (FFGED). Fungal Genetics and Biology : Fg & B. 47: 199-204. PMID 20025988 DOI: 10.1016/J.Fgb.2009.12.001 |
0.338 |
|
| 2009 |
Schoch CL, Sung GH, López-Giráldez F, Townsend JP, Miadlikowska J, Hofstetter V, Robbertse B, Matheny PB, Kauff F, Wang Z, Gueidan C, Andrie RM, Trippe K, Ciufetti LM, Wynns A, et al. The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits. Systematic Biology. 58: 224-39. PMID 20525580 DOI: 10.1093/Sysbio/Syp020 |
0.655 |
|
| 2009 |
Hodgins-Davis A, Townsend JP. Evolving gene expression: from G to E to GxE. Trends in Ecology & Evolution. 24: 649-58. PMID 19699549 DOI: 10.1016/J.Tree.2009.06.011 |
0.433 |
|
| 2009 |
Townsend JA, Wright DA, Winfrey RJ, Fu F, Maeder ML, Joung JK, Voytas DF. High-frequency modification of plant genes using engineered zinc-finger nucleases. Nature. 459: 442-5. PMID 19404258 DOI: 10.1038/Nature07845 |
0.309 |
|
| 2008 |
Townsend JP. Sleuthing the difference a nucleotide can make. Molecular Ecology. 17: 2793-5. PMID 18565029 DOI: 10.1111/J.1365-294X.2008.03824.X |
0.413 |
|
| 2007 |
Clark TA, Townsend JP. Quantifying variation in gene expression. Molecular Ecology. 16: 2613-6. PMID 17594433 DOI: 10.1111/J.1365-294X.2007.03354.X |
0.426 |
|
| 2007 |
Dunlap JC, Borkovich KA, Henn MR, Turner GE, Sachs MS, Glass NL, McCluskey K, Plamann M, Galagan JE, Birren BW, Weiss RL, Townsend JP, Loros JJ, Nelson MA, Lambreghts R, et al. Enabling a community to dissect an organism: overview of the Neurospora functional genomics project. Advances in Genetics. 57: 49-96. PMID 17352902 DOI: 10.1016/S0065-2660(06)57002-6 |
0.656 |
|
| 2006 |
Taylor JW, Turner E, Townsend JP, Dettman JR, Jacobson D. Eukaryotic microbes, species recognition and the geographic limits of species: examples from the kingdom Fungi. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 361: 1947-63. PMID 17062413 DOI: 10.1098/Rstb.2006.1923 |
0.689 |
|
| 2006 |
Aa E, Townsend JP, Adams RI, Nielsen KM, Taylor JW. Population structure and gene evolution in Saccharomyces cerevisiae. Fems Yeast Research. 6: 702-15. PMID 16879422 DOI: 10.1111/J.1567-1364.2006.00059.X |
0.498 |
|
| 2006 |
Johannesson H, Kasuga T, Schaller RA, Good B, Gardner MJ, Townsend JP, Cole GT, Taylor JW. Phase-specific gene expression underlying morphological adaptations of the dimorphic human pathogenic fungus, Coccidioides posadasii. Fungal Genetics and Biology : Fg & B. 43: 545-59. PMID 16697669 DOI: 10.1016/J.Fgb.2006.02.003 |
0.751 |
|
| 2005 |
Meiklejohn CD, Townsend JP. A Bayesian method for analysing spotted microarray data. Briefings in Bioinformatics. 6: 318-30. PMID 16420731 DOI: 10.1093/Bib/6.4.318 |
0.383 |
|
| 2005 |
Kasuga T, Townsend JP, Tian C, Gilbert LB, Mannhaupt G, Taylor JW, Glass NL. Long-oligomer microarray profiling in Neurospora crassa reveals the transcriptional program underlying biochemical and physiological events of conidial germination. Nucleic Acids Research. 33: 6469-85. PMID 16287898 DOI: 10.1093/Nar/Gki953 |
0.705 |
|
| 2005 |
Gogarten JP, Townsend JP. Horizontal gene transfer, genome innovation and evolution. Nature Reviews. Microbiology. 3: 679-87. PMID 16138096 DOI: 10.1038/Nrmicro1204 |
0.423 |
|
| 2005 |
Johannesson H, Townsend JP, Hung CY, Cole GT, Taylor JW. Concerted evolution in the repeats of an immunomodulating cell surface protein, SOWgp, of the human pathogenic fungi Coccidioides immitis and C. posadasii. Genetics. 171: 109-17. PMID 15965255 DOI: 10.1534/Genetics.105.040923 |
0.667 |
|
| 2005 |
Townsend JP, Taylor JW. Designing experiments using spotted microarrays to detect gene regulation differences within and among species. Methods in Enzymology. 395: 597-617. PMID 15865986 DOI: 10.1016/S0076-6879(05)95031-3 |
0.547 |
|
| 2004 |
Townsend JP. Resolution of large and small differences in gene expression using models for the Bayesian analysis of gene expression levels and spotted DNA microarrays. Bmc Bioinformatics. 5: 54. PMID 15128431 DOI: 10.1186/1471-2105-5-54 |
0.354 |
|
| 2003 |
Townsend JP, Cavalieri D, Hartl DL. Population genetic variation in genome-wide gene expression. Molecular Biology and Evolution. 20: 955-63. PMID 12716989 DOI: 10.1093/Molbev/Msg106 |
0.436 |
|
| 2002 |
Townsend JP, Hartl DL. Bayesian analysis of gene expression levels: statistical quantification of relative mRNA level across multiple strains or treatments. Genome Biology. 3: RESEARCH0071. PMID 12537560 DOI: 10.1186/Gb-2002-3-12-Research0071 |
0.393 |
|
| 2000 |
Cavalieri D, Townsend JP, Hartl DL. Manifold anomalies in gene expression in a vineyard isolate of Saccharomyces cerevisiae revealed by DNA microarray analysis. Proceedings of the National Academy of Sciences of the United States of America. 97: 12369-74. PMID 11035792 DOI: 10.1073/Pnas.210395297 |
0.46 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2015 |
Stiver KA, Harris RM, Townsend JP, Hofmann HA, Alonzo SH. Neural Gene Expression Profiles and Androgen Levels Underlie Alternative Reproductive Tactics in the Ocellated Wrasse, Symphodus ocellatus Ethology. 121: 152-167. DOI: 10.1111/Eth.12324 |
0.291 |
|
| 2019 |
Gaffney SG, Perry EB, Chen PM, Greenstein A, Kaech SM, Townsend JP. The landscape of novel and complementary targets for immunotherapy: an analysis of gene expression in the tumor microenvironment. Oncotarget. 10: 4532-4545. PMID 31360302 DOI: 10.18632/Oncotarget.27027 |
0.289 |
|
| 2016 |
Kadara H, Choi M, Zhang J, Cuentas EP, Canales JR, Gaffney S, Zhao Z, Behrens C, Fujimoto J, Chow C, Kalhor N, Moran C, Rimm D, Swisher SG, Gibbons DL, ... ... Townsend J, et al. Abstract 89: Whole-exome sequencing and immune profiling of early-stage lung adenocarcinoma Cancer Research. 76: 89-89. DOI: 10.1158/1538-7445.Am2016-89 |
0.288 |
|
| 2019 |
Lu L, Gaffney SG, Cannataro VL, Townsend J. Transfer RNA methyltransferase gene NSUN2 mRNA expression modifies the effect of T cell activation score on patient survival in head and neck squamous carcinoma. Oral Oncology. 101: 104554. PMID 31887619 DOI: 10.1016/J.Oraloncology.2019.104554 |
0.286 |
|
| 2008 |
Maeder ML, Thibodeau-Beganny S, Osiak A, Wright DA, Anthony RM, Eichtinger M, Jiang T, Foley JE, Winfrey RJ, Townsend JA, Unger-Wallace E, Sander JD, Müller-Lerch F, Fu F, Pearlberg J, et al. Rapid "open-source" engineering of customized zinc-finger nucleases for highly efficient gene modification. Molecular Cell. 31: 294-301. PMID 18657511 DOI: 10.1016/J.Molcel.2008.06.016 |
0.285 |
|
| 2003 |
Townsend JP, Nielsen KM, Fisher DS, Hartl DL. Horizontal acquisition of divergent chromosomal DNA in bacteria: effects of mutator phenotypes. Genetics. 164: 13-21. PMID 12750317 DOI: 10.7490/F1000Research.1096391.1 |
0.285 |
|
| 2007 |
Townsend JP. Profiling phylogenetic informativeness. Systematic Biology. 56: 222-31. PMID 17464879 DOI: 10.1080/10635150701311362 |
0.278 |
|
| 2008 |
Townsend JP, López-Giráldez F, Friedman R. The phylogenetic informativeness of nucleotide and amino acid sequences for reconstructing the vertebrate tree. Journal of Molecular Evolution. 67: 437-47. PMID 18696029 DOI: 10.1007/S00239-008-9142-0 |
0.274 |
|
| 2015 |
Hwang J, Zhao Q, Yang ZL, Wang Z, Townsend JP. Solving the ecological puzzle of mycorrhizal associations using data from annotated collections and environmental samples - an example of saddle fungi. Environmental Microbiology Reports. 7: 658-67. PMID 26033481 DOI: 10.1111/1758-2229.12303 |
0.271 |
|
| 2014 |
Wu C, Yang F, Smith KM, Peterson M, Dekhang R, Zhang Y, Zucker J, Bredeweg EL, Mallappa C, Zhou X, Lyubetskaya A, Townsend JP, Galagan JE, Freitag M, Dunlap JC, et al. Genome-wide characterization of light-regulated genes in Neurospora crassa. G3 (Bethesda, Md.). 4: 1731-45. PMID 25053707 DOI: 10.1534/G3.114.012617 |
0.27 |
|
| 2018 |
Santos LA, Adhikarla H, Yan X, Wang Z, Fouts DE, Vinetz JM, Alcantara LCJ, Hartskeerl RA, Goris MGA, Picardeau M, Reis MG, Townsend JP, Zhao H, Ko AI, Wunder EA. Genomic Comparison Among Global Isolates of Serovars Copenhageni and Icterohaemorrhagiae Identified Natural Genetic Variation Caused by an Indel. Frontiers in Cellular and Infection Microbiology. 8: 193. PMID 29971217 DOI: 10.3389/Fcimb.2018.00193 |
0.267 |
|
| 2009 |
Otto W, Stadler PF, López-Giraldéz F, Townsend JP, Lynch VJ, Wagner GP. Measuring transcription factor-binding site turnover: a maximum likelihood approach using phylogenies. Genome Biology and Evolution. 1: 85-98. PMID 20333180 DOI: 10.1093/Gbe/Evp010 |
0.26 |
|
| 2017 |
Dornburg A, Townsend JP, Brooks W, Spriggs E, Eytan RI, Moore JA, Wainwright PC, Lemmon A, Lemmon EM, Near TJ. New Insights on the Sister Lineage of Percomorph Fishes with an Anchored Hybrid Enrichment Dataset. Molecular Phylogenetics and Evolution. PMID 28254474 DOI: 10.1016/J.Ympev.2017.02.017 |
0.259 |
|
| 2010 |
Townsend JP, Lopez-Giraldez F. Optimal selection of gene and ingroup taxon sampling for resolving phylogenetic relationships. Systematic Biology. 59: 446-57. PMID 20547780 DOI: 10.1093/Sysbio/Syq025 |
0.258 |
|
| 2015 |
Townsend J. Mapping Disease Transmission Risk: Enriching Models Using Biogeography and Ecology. Emerging Infectious Diseases. 21: 1489-1489. DOI: 10.3201/Eid2108.150665 |
0.256 |
|
| 2002 |
Grosu P, Townsend JP, Hartl DL, Cavalieri D. Pathway Processor: a tool for integrating whole-genome expression results into metabolic networks. Genome Research. 12: 1121-6. PMID 12097350 DOI: 10.1101/Gr.226602 |
0.253 |
|
| 2011 |
López-Giráldez F, Townsend JP. PhyDesign: an online application for profiling phylogenetic informativeness. Bmc Evolutionary Biology. 11: 152. PMID 21627831 DOI: 10.1186/1471-2148-11-152 |
0.252 |
|
| 2011 |
Johnsen PJ, Townsend JP, Bøhn T, Simonsen GS, Sundsfjord A, Nielsen KM. Retrospective evidence for a biological cost of vancomycin resistance determinants in the absence of glycopeptide selective pressures. The Journal of Antimicrobial Chemotherapy. 66: 608-10. PMID 21217128 DOI: 10.1093/Jac/Dkq512 |
0.252 |
|
| 2015 |
Prum RO, Berv JS, Dornburg A, Field DJ, Townsend JP, Lemmon EM, Lemmon AR. A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing. Nature. 526: 569-73. PMID 26444237 DOI: 10.1038/Nature15697 |
0.243 |
|
| 2014 |
Nielsen KM, Bøhn T, Townsend JP. Detecting rare gene transfer events in bacterial populations. Frontiers in Microbiology. 4: 415. PMID 24432015 DOI: 10.3389/Fmicb.2013.00415 |
0.242 |
|
| 2012 |
Townsend JP, Bøhn T, Nielsen KM. Assessing the probability of detection of horizontal gene transfer events in bacterial populations. Frontiers in Microbiology. 3: 27. PMID 22363321 DOI: 10.3389/Fmicb.2012.00027 |
0.239 |
|
| 2006 |
Landry CR, Townsend JP, Hartl DL, Cavalieri D. Ecological and evolutionary genomics of Saccharomyces cerevisiae. Molecular Ecology. 15: 575-91. PMID 16499686 DOI: 10.1111/J.1365-294X.2006.02778.X |
0.238 |
|
| 2022 |
Mandell JD, Cannataro VL, Townsend JP. Estimation of neutral mutation rates and quantification of somatic variant selection using canceffectsizeR. Cancer Research. PMID 36469362 DOI: 10.1158/0008-5472.CAN-22-1508 |
0.235 |
|
| 2017 |
Dornburg A, Townsend JP, Wang Z. Maximizing Power in Phylogenetics and Phylogenomics: A Perspective Illuminated by Fungal Big Data. Advances in Genetics. 100: 1-47. PMID 29153398 DOI: 10.1016/Bs.Adgen.2017.09.007 |
0.235 |
|
| 2013 |
McBride RC, Boucher N, Park DS, Turner PE, Townsend JP. Yeast response to LA virus indicates coadapted global gene expression during mycoviral infection. Fems Yeast Research. 13: 162-79. PMID 23122216 DOI: 10.1111/1567-1364.12019 |
0.235 |
|
| 2016 |
Atkins KE, Pandey A, Wenzel NS, Skrip L, Yamin D, Nyenswah TG, Fallah M, Bawo L, Medlock J, Altice FL, Townsend J, Ndeffo-Mbah ML, Galvani AP. Retrospective Analysis of the 2014-2015 Ebola Epidemic in Liberia. The American Journal of Tropical Medicine and Hygiene. PMID 26928839 DOI: 10.4269/Ajtmh.15-0328 |
0.233 |
|
| 2014 |
Su Z, Lopez-Giraldez F, Tekle Y, Leuenberger C, Townsend J. Phylogenetic experimental design F1000research. 5. DOI: 10.7490/F1000Research.1096505.1 |
0.232 |
|
| 2008 |
Clark TA, Guilmette JM, Renstrom D, Townsend JP. RNA extraction, probe preparation, and competitive hybridization for transcriptional profiling using Neurospora crassa long-oligomer DNA microarrays Fungal Genetics Reports. 55: 18-28. DOI: 10.4148/1941-4765.1086 |
0.231 |
|
| 2018 |
Kim W, Miguel-Rojas C, Wang J, Townsend JP, Trail F. Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum. Mbio. 9. PMID 30108170 DOI: 10.1128/Mbio.01292-18 |
0.226 |
|
| 2017 |
Claus EB, Greenhalgh S, Gaffney SG, Bilguvar K, Calvocoressi L, Lu L, Al-Mefty O, Zi-Ming Zhao Z, Townsend JP. P12.06 Significantly Mutated Genes for Radiation-Associated Meningioma Neuro-Oncology. 19: iii96-iii96. DOI: 10.1093/Neuonc/Nox036.364 |
0.223 |
|
| 2017 |
Cannataro V, Brumberg K, Gaffney S, Townsend J. Effect Sizes of Somatic Mutations in Lung Cancer: Identifying New Targets and Prioritizing Old Ones Journal of Thoracic Oncology. 12: S1542-S1543. DOI: 10.1016/J.Jtho.2017.06.047 |
0.223 |
|
| 2017 |
Cannataro V, Gaffney S, Stender C, Zhao Z, Philips M, Greenstein A, Townsend J. The Likelihood of Heterogeneity or Additional Mutation to Compromise Targeting of KRAS G12C Journal of Thoracic Oncology. 12: S1538. DOI: 10.1016/J.Jtho.2017.06.029 |
0.218 |
|
| 2020 |
Qing T, Mohsen H, Marczyk M, Ye Y, O'Meara T, Zhao H, Townsend JP, Gerstein M, Hatzis C, Kluger Y, Pusztai L. Germline variant burden in cancer genes correlates with age at diagnosis and somatic mutation burden. Nature Communications. 11: 2438. PMID 32415133 DOI: 10.1038/S41467-020-16293-7 |
0.217 |
|
| 2010 |
Tekle YI, Grant JR, Kovner AM, Townsend JP, Katz LA. Identification of new molecular markers for assembling the eukaryotic tree of life. Molecular Phylogenetics and Evolution. 55: 1177-82. PMID 20302952 DOI: 10.1016/J.Ympev.2010.03.010 |
0.214 |
|
| 2009 |
Schoch CL, Wang Z, Townsend JP, Spatafora JW. Geoglossomycetes cl. nov., Geoglossales ord. nov. and taxa above class rank in the Ascomycota Tree of Life. Persoonia. 22: 129-38. PMID 19915689 DOI: 10.3767/003158509X461486 |
0.213 |
|
| 2004 |
Nielsen KM, Townsend JP. Monitoring and modeling horizontal gene transfer. Nature Biotechnology. 22: 1110-4. PMID 15340481 DOI: 10.1038/Nbt1006 |
0.213 |
|
| 2010 |
Ohenoja E, Wang Z, Townsend JP, Mitchel D, Voitk A. Northern species of earth tongue genus Thuemenidium revisited, considering morphology, ecology and molecular phylogeny. Mycologia. 102: 1089-95. PMID 20943508 DOI: 10.3852/09-317 |
0.212 |
|
| 2011 |
Wang Z, Nilsson RH, Lopez-Giraldez F, Zhuang WY, Dai YC, Johnston PR, Townsend JP. Tasting soil fungal diversity with earth tongues: phylogenetic test of SATé alignments for environmental ITS data. Plos One. 6: e19039. PMID 21533038 DOI: 10.1371/Journal.Pone.0019039 |
0.207 |
|
| 2012 |
Townsend JP, Su Z, Tekle YI. Phylogenetic signal and noise: predicting the power of a data set to resolve phylogeny. Systematic Biology. 61: 835-49. PMID 22389443 DOI: 10.1093/Sysbio/Sys036 |
0.204 |
|
| 2017 |
Hastings K, Choi J, Wurtz A, Walther Z, Cai G, Oliva I, Zhao Z, Gaffney S, Iamarino A, Zhao S, Bi M, Goldberg S, Chiang A, Liu Z, Townsend J, et al. MA16.02 Mutational Landscape of TKI Naïve and Resistant EGFR Mutant Lung Adenocarcinomas Journal of Thoracic Oncology. 12: S435. DOI: 10.1016/J.Jtho.2016.11.507 |
0.202 |
|
| 2016 |
Gaffney SG, Townsend JP. PathScore: a web tool for identifying altered pathways in cancer data. Bioinformatics (Oxford, England). PMID 27503224 DOI: 10.1093/Bioinformatics/Btw512 |
0.198 |
|
| 2021 |
Herold I, Zolti A, Garduño-Rosales M, Wang Z, López-Giráldez F, Mouriño-Pérez RR, Townsend JP, Ulitsky I, Yarden O. The GUL-1 Protein Binds Multiple RNAs Involved in Cell Wall Remodeling and Affects the MAK-1 Pathway in Neurospora crassa Frontiers in Fungal Biology. 2. DOI: 10.3389/ffunb.2021.672696 |
0.197 |
|
| 2021 |
Herold I, Zolti A, Garduño-Rosales M, Wang Z, López-Giráldez F, Mouriño-Pérez RR, Townsend JP, Ulitsky I, Yarden O. The GUL-1 Protein Binds Multiple RNAs Involved in Cell Wall Remodeling and Affects the MAK-1 Pathway in . Frontiers in Fungal Biology. 2: 672696. PMID 37744127 DOI: 10.3389/ffunb.2021.672696 |
0.196 |
|
| 2018 |
Townsend JP. The Cancer Tree. Scientific American. 318: 34-41. PMID 29557973 DOI: 10.1038/Scientificamerican0418-34 |
0.193 |
|
| 2009 |
Wang Z, Johnston PR, Yang ZL, Townsend JP. Evolution of reproductive morphology in leaf endophytes. Plos One. 4: e4246. PMID 19158947 DOI: 10.1371/Journal.Pone.0004246 |
0.191 |
|
| 2018 |
Dornburg A, Su Z, Townsend JP. Optimal rates for phylogenetic inference and experimental design in the era of genome-scale datasets. Systematic Biology. PMID 29939341 DOI: 10.7490/F1000Research.1116969.1 |
0.184 |
|
| 2013 |
Moeller AH, Townsend JP. Response to: The relative utility of sequence divergence and phylogenetic informativeness profiling in phylogenetic study design. Molecular Phylogenetics and Evolution. 66: 436. PMID 23063589 DOI: 10.1016/J.Ympev.2012.09.035 |
0.178 |
|
| 2005 |
Wright DA, Townsend JA, Winfrey RJ, Irwin PA, Rajagopal J, Lonosky PM, Hall BD, Jondle MD, Voytas DF. High-frequency homologous recombination in plants mediated by zinc-finger nucleases. The Plant Journal : For Cell and Molecular Biology. 44: 693-705. PMID 16262717 DOI: 10.1111/J.1365-313X.2005.02551.X |
0.176 |
|
| 2004 |
Townsend JP, Rand DM. Mitochondrial genome size variation in New World and Old World populations of Drosophila melanogaster. Heredity. 93: 98-103. PMID 15138453 DOI: 10.1038/Sj.Hdy.6800484 |
0.175 |
|
| 2021 |
Dasari K, Somarelli JA, Kumar S, Townsend JP. The somatic molecular evolution of cancer: Mutation, selection, and epistasis. Progress in Biophysics and Molecular Biology. PMID 34364910 DOI: 10.1016/j.pbiomolbio.2021.08.003 |
0.175 |
|
| 2016 |
Zhao ZM, Zhao B, Bai Y, Iamarino A, Gaffney SG, Schlessinger J, Lifton RP, Rimm DL, Townsend JP. Early and multiple origins of metastatic lineages within primary tumors. Proceedings of the National Academy of Sciences of the United States of America. PMID 26858460 DOI: 10.1073/Pnas.1525677113 |
0.175 |
|
| 2023 |
Alfaro-Murillo JA, Townsend JP. Pairwise and higher-order epistatic effects among somatic cancer mutations across oncogenesis. Mathematical Biosciences. 109091. PMID 37996064 DOI: 10.1016/j.mbs.2023.109091 |
0.174 |
|
| 2014 |
Dornburg A, Townsend JP, Friedman M, Near TJ. Phylogenetic informativeness reconciles ray-finned fish molecular divergence times. Bmc Evolutionary Biology. 14: 169. PMID 25103329 DOI: 10.1186/S12862-014-0169-0 |
0.173 |
|
| 2011 |
Mathioni SM, Beló A, Townsend JP, Donofrio NM. Getting the most out of your fungal microarray data: two cost- and time-effective methods. Methods in Molecular Biology (Clifton, N.J.). 722: 61-77. PMID 21590413 DOI: 10.1007/978-1-61779-040-9_5 |
0.172 |
|
| 2018 |
Cannataro VL, Gaffney SG, Stender C, Zhao ZM, Philips M, Greenstein AE, Townsend JP. Heterogeneity and mutation in KRAS and associated oncogenes: evaluating the potential for the evolution of resistance to targeting of KRAS G12C. Oncogene. PMID 29453361 DOI: 10.1038/S41388-017-0105-Z |
0.171 |
|
| 2015 |
Su Z, Townsend JP. Utility of characters evolving at diverse rates of evolution to resolve quartet trees with unequal branch lengths: analytical predictions of long-branch effects. Bmc Evolutionary Biology. 15: 86. PMID 25968460 DOI: 10.1186/S12862-015-0364-7 |
0.171 |
|
| 2018 |
Cannataro VL, Gaffney SG, Townsend JP. Effect Sizes of Somatic Mutations in Cancer. Journal of the National Cancer Institute. PMID 30365005 DOI: 10.1093/Jnci/Djy168 |
0.162 |
|
| 2016 |
Lewnard JA, Townsend JP. Climatic and evolutionary drivers of phase shifts in the plague epidemics of colonial India. Proceedings of the National Academy of Sciences of the United States of America. PMID 27791071 DOI: 10.1073/Pnas.1604985113 |
0.159 |
|
| 2014 |
Su Z, Wang Z, López-Giráldez F, Townsend JP. The impact of incorporating molecular evolutionary model into predictions of phylogenetic signal and noise Frontiers in Ecology and Evolution. 2. DOI: 10.3389/Fevo.2014.00011 |
0.155 |
|
| 2019 |
Cannataro VL, Gaffney SG, Sasaki T, Issaeva N, Grewal NKS, Grandis JR, Yarbrough WG, Burtness B, Anderson KS, Townsend JP. APOBEC-induced mutations and their cancer effect size in head and neck squamous cell carcinoma. Oncogene. PMID 30647454 DOI: 10.1038/S41388-018-0657-6 |
0.154 |
|
| 2015 |
Scarpino SV, Iamarino A, Wells C, Yamin D, Ndeffo-Mbah M, Wenzel NS, Fox SJ, Nyenswah T, Altice FL, Galvani AP, Meyers LA, Townsend JP. Epidemiological and viral genomic sequence analysis of the 2014 ebola outbreak reveals clustered transmission. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 60: 1079-82. PMID 25516185 DOI: 10.1093/Cid/Ciu1131 |
0.154 |
|
| 2012 |
Rice DP, Townsend JP. A test for selection employing quantitative trait locus and mutation accumulation data. Genetics. 190: 1533-45. PMID 22298701 DOI: 10.1534/Genetics.111.137075 |
0.154 |
|
| 2014 |
Campbell MC, Hirbo JB, Townsend JP, Tishkoff SA. The peopling of the African continent and the diaspora into the new world. Current Opinion in Genetics & Development. 29: 120-32. PMID 25461616 DOI: 10.1016/J.Gde.2014.09.003 |
0.151 |
|
| 2013 |
Rice DP, Townsend JP. Employing quantitative trait locus and mutation accumulation data to attribute the evolution of phenotype to adaptation F1000research. 4. DOI: 10.7490/F1000Research.1093991.1 |
0.149 |
|
| 2016 |
Dornburg A, Fisk JN, Tamagnan J, Townsend JP. PhyInformR: phylogenetic experimental design and phylogenomic data exploration in R. Bmc Evolutionary Biology. 16: 262. PMID 27905871 DOI: 10.1186/S12862-016-0837-3 |
0.149 |
|
| 2000 |
Townsend JP, Hartl DL. The kinetics of transposable element autoregulation. Genetica. 108: 229-37. PMID 11294609 DOI: 10.1023/A:1004172703790 |
0.148 |
|
| 2022 |
Gortikov M, Wang Z, Steindorff AS, Grigoriev IV, Druzhinina IS, Townsend JP, Yarden O. Sequencing and Analysis of the Entire Genome of the Mycoparasitic Bioeffector Fungus Trichoderma asperelloides Strain T 203 (Hypocreales). Microbiology Resource Announcements. 11: e0099521. PMID 35175124 DOI: 10.1128/mra.00995-21 |
0.145 |
|
| 2015 |
Hong WS, Shpak M, Townsend JP. Inferring the Origin of Metastases from Cancer Phylogenies. Cancer Research. 75: 4021-5. PMID 26260528 DOI: 10.1158/0008-5472.Can-15-1889 |
0.144 |
|
| 2022 |
Miura S, Vu T, Choi J, Townsend JP, Karim S, Kumar S. A phylogenetic approach to study the evolution of somatic mutational processes in cancer. Communications Biology. 5: 617. PMID 35732905 DOI: 10.1038/s42003-022-03560-0 |
0.144 |
|
| 2019 |
Somarelli JA, Gardner H, Cannataro VL, Gunady EF, Boddy AM, Johnson NA, Fisk JN, Gaffney SG, Chuang JH, Li S, Ciccarelli FD, Panchenko AR, Megquier K, Kumar S, Dornburg A, ... Townsend JP, et al. Molecular biology and evolution of cancer: from discovery to action. Molecular Biology and Evolution. PMID 31642480 DOI: 10.1093/Molbev/Msz242 |
0.144 |
|
| 2003 |
Townsend JP. Multifactorial experimental design and the transitivity of ratios with spotted DNA microarrays. Bmc Genomics. 4: 41. PMID 14525623 DOI: 10.1186/1471-2164-4-41 |
0.141 |
|
| 2018 |
Wilkins JF, Cannataro VL, Shuch B, Townsend JP. Analysis of mutation, selection, and epistasis: an informed approach to cancer clinical trials. Oncotarget. 9: 22243-22253. PMID 29854275 DOI: 10.18632/Oncotarget.25155 |
0.141 |
|
| 2013 |
Atkins KE, Townsend JP, Medlock J, Galvani AP. Epidemiological mechanisms of genetic resistance to kuru. Journal of the Royal Society, Interface / the Royal Society. 10: 20130331. PMID 23740487 DOI: 10.1098/Rsif.2013.0331 |
0.141 |
|
| 2017 |
Park B, Rutter MT, Fenster CB, Symonds VV, Ungerer MC, Townsend JP. Distributions of Mutational Effects and the Estimation of Directional Selection in Divergent Lineages of Arabidopsis thaliana. Genetics. PMID 28550014 DOI: 10.1534/Genetics.116.199190 |
0.135 |
|
| 2000 |
Bustamante CD, Townsend JP, Hartl DL. Solvent accessibility and purifying selection within proteins of Escherichia coli and Salmonella enterica. Molecular Biology and Evolution. 17: 301-8. PMID 10677853 DOI: 10.1093/Oxfordjournals.Molbev.A026310 |
0.13 |
|
| 2021 |
Fisk JN, Mahal AR, Dornburg A, Gaffney SG, Aneja S, Contessa JN, Rimm D, Yu JB, Townsend JP. Premetastatic shifts of endogenous and exogenous mutational processes support consolidative therapy in EGFR-driven lung adenocarcinoma. Cancer Letters. PMID 34780851 DOI: 10.1016/j.canlet.2021.11.011 |
0.13 |
|
| 2009 |
Zhang Z, Townsend JP. Maximum-likelihood model averaging to profile clustering of site types across discrete linear sequences. Plos Computational Biology. 5: e1000421. PMID 19557160 DOI: 10.1371/Journal.Pcbi.1000421 |
0.13 |
|
| 2016 |
Kadara H, Choi M, Zhang J, Cuentas EP, Canales JR, Gaffney SG, Zhao Z, Behrens C, Fujimoto J, Chow C, Yoo Y, Kalhor N, Moran C, Rimm D, Swisher S, ... ... Townsend JP, et al. Whole-exome sequencing and immune profiling of early-stage lung adenocarcinoma with fully annotated clinical follow-up. Annals of Oncology : Official Journal of the European Society For Medical Oncology. PMID 27687306 DOI: 10.1093/Annonc/Mdw436 |
0.127 |
|
| 2017 |
Chen WS, Bindra R, Mo A, Hayman T, Husain Z, Contessa JN, Gaffney SG, Townsend JP, Yu JB. CDKN2A copy number loss in HPV- and HPV+ head and neck cancer to indicate poor prognosis: An integrated genomic and clinical TCGA analysis. Journal of Clinical Oncology. 35: 6060-6060. DOI: 10.1200/Jco.2017.35.15_Suppl.6060 |
0.126 |
|
| 2019 |
Johnston PR, Quijada L, Smith CA, Baral H, Hosoya T, Baschien C, Pärtel K, Zhuang W, Haelewaters D, Park D, Carl S, López-Giráldez F, Wang Z, Townsend JP. A multigene phylogeny toward a new phylogenetic classification of Leotiomycetes Ima Fungus. 10. DOI: 10.1186/s43008-019-0002-x |
0.126 |
|
| 2016 |
Somarelli JA, Ware KE, Kostadinov R, Robinson JM, Amri H, Abu-Asab M, Fourie N, Diogo R, Swofford D, Townsend JP. PhyloOncology: Understanding cancer through phylogenetic analysis. Biochimica Et Biophysica Acta. PMID 27810337 DOI: 10.1016/J.Bbcan.2016.10.006 |
0.123 |
|
| 2022 |
Cannataro VL, Kudalkar S, Dasari K, Gaffney SG, Lazowski HM, Jackson LK, Yildiz I, Das RK, Gould Rothberg BE, Anderson KS, Townsend JP. APOBEC mutagenesis and selection for NFE2L2 contribute to the origin of lung squamous-cell carcinoma. Lung Cancer (Amsterdam, Netherlands). 171: 34-41. PMID 35872531 DOI: 10.1016/j.lungcan.2022.07.004 |
0.122 |
|
| 2018 |
Chen WS, Bindra RS, Mo A, Hayman T, Husain Z, Contessa JN, Gaffney SG, Townsend JP, Yu JB. CDKN2A Copy Number Loss Is an Independent Prognostic Factor in HPV-Negative Head and Neck Squamous Cell Carcinoma. Frontiers in Oncology. 8: 95. PMID 29670856 DOI: 10.3389/Fonc.2018.00095 |
0.12 |
|
| 2021 |
Claus EB, Cannataro VL, Gaffney SG, Townsend JP. Environmental and sex-specific molecular signatures of glioma causation. Neuro-Oncology. PMID 33942853 DOI: 10.1093/neuonc/noab103 |
0.119 |
|
| 2017 |
Chen WS, Townsend JP, Yu JB. Radiation-Specific Clinical Data Should Be Included in Existing Large-Scale Genomic Datasets. International Journal of Radiation Oncology, Biology, Physics. 98: 8-10. PMID 28587055 DOI: 10.1016/J.Ijrobp.2017.01.023 |
0.119 |
|
| 2014 |
Talbert-Slagle K, Atkins KE, Yan KK, Khurana E, Gerstein M, Bradley EH, Berg D, Galvani AP, Townsend JP. Cellular superspreaders: an epidemiological perspective on HIV infection inside the body. Plos Pathogens. 10: e1004092. PMID 24811311 DOI: 10.1371/Journal.Ppat.1004092 |
0.118 |
|
| 2022 |
Cannataro VL, Mandell JD, Townsend JP. Attribution of Cancer Origins to Endogenous, Exogenous, and Preventable Mutational Processes. Molecular Biology and Evolution. 39. PMID 35580068 DOI: 10.1093/molbev/msac084 |
0.117 |
|
| 2020 |
Boyko RH, Marie Harrison L, Humphries D, Galvani AP, Townsend JP, Otchere J, Wilson MD, Cappello M. Dogs and pigs are transport hosts of Necator americanus: Molecular evidence for a zoonotic mechanism of human hookworm transmission in Ghana. Zoonoses and Public Health. PMID 32529782 DOI: 10.1111/Zph.12708 |
0.116 |
|
| 2016 |
Choi M, Kadara H, Zhang J, Cuentas EP, Canales JR, Gaffney SG, Zhao Z, Behrens C, Fujimoto J, Chow C, Kim K, Kalhor N, Moran C, Rimm D, Swisher S, ... ... Townsend JP, et al. Mutation profiles in early-stage lung squamous cell carcinoma with clinical follow-up and correlation with markers of immune function. Annals of Oncology : Official Journal of the European Society For Medical Oncology. PMID 27687303 DOI: 10.1093/annonc/mdw437 |
0.115 |
|
| 2018 |
Gomez K, Miura S, Huuki LA, Spell BS, Townsend JP, Kumar S. Somatic evolutionary timings of driver mutations. Bmc Cancer. 18: 85. PMID 29347918 DOI: 10.1186/S12885-017-3977-Y |
0.115 |
|
| 2018 |
Cannataro VL, Townsend JP. Neutral theory and the somatic evolution of cancer. Molecular Biology and Evolution. PMID 29684198 DOI: 10.1093/Molbev/Msy079 |
0.115 |
|
| 2017 |
Kadara H, Choi M, Zhang J, Parra ER, Rodriguez-Canales J, Gaffney SG, Zhao Z, Behrens C, Fujimoto J, Chow C, Yoo Y, Kalhor N, Moran C, Rimm D, Swisher S, ... ... Townsend JP, et al. Whole-exome sequencing and immune profiling of early-stage lung adenocarcinoma with fully annotated clinical follow-up. Annals of Oncology : Official Journal of the European Society For Medical Oncology. PMID 28368511 DOI: 10.1093/annonc/mdx062 |
0.114 |
|
| 2015 |
Hollingsworth TD, Adams ER, Anderson RM, Atkins K, Bartsch S, Basáñez MG, Behrend M, Blok DJ, Chapman LA, Coffeng L, Courtenay O, Crump RE, de Vlas SJ, Dobson A, Dyson L, ... ... Townsend J, et al. Quantitative analyses and modelling to support achievement of the 2020 goals for nine neglected tropical diseases. Parasites & Vectors. 8: 630. PMID 26652272 DOI: 10.1186/S13071-015-1235-1 |
0.109 |
|
| 2021 |
Townsend JP, Hassler HB, Wang Z, Miura S, Singh J, Kumar S, Ruddle NH, Galvani AP, Dornburg A. The durability of immunity against reinfection by SARS-CoV-2: a comparative evolutionary study. The Lancet. Microbe. PMID 34632431 DOI: 10.1016/S2666-5247(21)00219-6 |
0.109 |
|
| 2021 |
Klein MI, Cannataro VL, Townsend JP, Newman S, Stern DF, Zhao H. Identifying modules of cooperating cancer drivers. Molecular Systems Biology. 17: e9810. PMID 33769711 DOI: 10.15252/msb.20209810 |
0.106 |
|
| 2012 |
Rice DP, Townsend JP. Resampling QTL effects in the QTL sign test leads to incongruous sensitivity to variance in effect size. G3 (Bethesda, Md.). 2: 905-11. PMID 22908039 DOI: 10.1534/G3.112.003228 |
0.104 |
|
| 2022 |
Chroni A, Miura S, Hamilton L, Vu T, Gaffney SG, Aly V, Karim S, Sanderford M, Townsend JP, Kumar S. Clone Phylogenetics Reveals Metastatic Tumor Migrations, Maps, and Models. Cancers. 14. PMID 36077861 DOI: 10.3390/cancers14174326 |
0.101 |
|
| 2016 |
Gilbert JA, Medlock J, Townsend JP, Aksoy S, Ndeffo Mbah M, Galvani AP. Determinants of Human African Trypanosomiasis Elimination via Paratransgenesis. Plos Neglected Tropical Diseases. 10: e0004465. PMID 26954675 DOI: 10.1371/Journal.Pntd.0004465 |
0.098 |
|
| 2011 |
Townsend JP, Leuenberger C. Taxon sampling and the optimal rates of evolution for phylogenetic inference. Systematic Biology. 60: 358-65. PMID 21303824 DOI: 10.1093/Sysbio/Syq097 |
0.096 |
|
| 2022 |
Mandell JD, Fisk JN, Cyrenne E, Xu ML, Cannataro VL, Townsend JP. Not only mutations but also tumorigenesis can be substantially attributed to DNA damage from reactive oxygen species in RUNX1::RUNX1T1-fusion-positive acute myeloid leukemia. Leukemia. PMID 36369483 DOI: 10.1038/s41375-022-01752-5 |
0.095 |
|
| 2009 |
Zhang Z, Cheung KH, Townsend JP. Bringing Web 2.0 to bioinformatics. Briefings in Bioinformatics. 10: 1-10. PMID 18842678 DOI: 10.1093/Bib/Bbn041 |
0.092 |
|
| 2015 |
Ghosh S, Townsend JP. H-CLAP: hierarchical clustering within a linear array with an application in genetics. Statistical Applications in Genetics and Molecular Biology. 14: 125-41. PMID 25803088 DOI: 10.1515/Sagmb-2013-0076 |
0.092 |
|
| 2020 |
Townsend JP, Gemmell BJ, Sutherland KR, Colin SP, Costello JH. Ink Release and Swimming Behavior in the Oceanic Ctenophore . The Biological Bulletin. 238: 206-213. PMID 32597720 DOI: 10.1086/709504 |
0.092 |
|
| 2014 |
Pandey A, Atkins KE, Medlock J, Wenzel N, Townsend JP, Childs JE, Nyenswah TG, Ndeffo-Mbah ML, Galvani AP. Strategies for containing Ebola in West Africa. Science (New York, N.Y.). 346: 991-5. PMID 25414312 DOI: 10.1126/Science.1260612 |
0.091 |
|
| 2008 |
Cheung KH, Yip KY, Townsend JP, Scotch M. HCLS 2.0/3.0: health care and life sciences data mashup using Web 2.0/3.0. Journal of Biomedical Informatics. 41: 694-705. PMID 18487092 DOI: 10.1016/J.Jbi.2008.04.001 |
0.089 |
|
| 2019 |
Gaffney SG, Ad O, Smaga S, Schepartz A, Townsend JP. GEM-NET: Lessons in Multi-Institution Teamwork Using Collaboration Software. Acs Central Science. 5: 1159-1169. PMID 31404233 DOI: 10.1021/Acscentsci.9B00111 |
0.087 |
|
| 2013 |
Harrison N, Cavinder B, Townsend JP, Trail F. Optimized primers and other critical conditions for efficient fusion PCR to generate knockout vectors in filamentous fungi. Fungal Genetics Reports. 60: 1-10. DOI: 10.4148/1941-4765.1006 |
0.087 |
|
| 2019 |
Fitzpatrick MC, Bauch CT, Townsend JP, Galvani AP. Modelling microbial infection to address global health challenges. Nature Microbiology. 4: 1612-1619. PMID 31541212 DOI: 10.1038/S41564-019-0565-8 |
0.084 |
|
| 2023 |
Townsend JP, Hassler HB, Lamb AD, Sah P, Alvarez Nishio A, Nguyen C, Tew AD, Galvani AP, Dornburg A. Seasonality of endemic COVID-19. Mbio. e0142623. PMID 37937979 DOI: 10.1128/mbio.01426-23 |
0.084 |
|
| 2012 |
Tekle YI, Nielsen KM, Liu J, Pettigrew MM, Meyers LA, Galvani AP, Townsend JP. Controlling antimicrobial resistance through targeted, vaccine-induced replacement of strains. Plos One. 7: e50688. PMID 23227198 DOI: 10.1371/Journal.Pone.0050688 |
0.082 |
|
| 2022 |
Wells CR, Pandey A, Gokcebel S, Krieger G, Donoghue AM, Singer BH, Moghadas SM, Galvani AP, Townsend JP. Quarantine and serial testing for variants of SARS-CoV-2 with benefits of vaccination and boosting on consequent control of COVID-19. Pnas Nexus. 1: pgac100. PMID 35909795 DOI: 10.1093/pnasnexus/pgac100 |
0.082 |
|
| 2009 |
Wang Z, López-Giréidez F, Townsend JP. Article Commentary: Snapshots of Tree Space Evolutionary Bioinformatics. 5: EBO.S3416. DOI: 10.4137/Ebo.S3416 |
0.08 |
|
| 2023 |
Gaffney SG, Townsend JP. Jot: guiding journal selection with suitability metrics. Journal of the Medical Library Association : Jmla. 110: 376-380. PMID 36589304 DOI: 10.5195/jmla.2022.1499 |
0.079 |
|
| 2014 |
Gilbert JA, Meyers LA, Galvani AP, Townsend JP. Probabilistic uncertainty analysis of epidemiological modeling to guide public health intervention policy. Epidemics. 6: 37-45. PMID 24593920 DOI: 10.1016/J.Epidem.2013.11.002 |
0.077 |
|
| 2022 |
Wells CR, Gokcebel S, Pandey A, Galvani AP, Townsend JP. Testing for COVID-19 is Much More Effective When Performed Immediately Prior to Social Mixing. International Journal of Public Health. 67: 1604659. PMID 35967267 DOI: 10.3389/ijph.2022.1604659 |
0.073 |
|
| 2009 |
Johnsen PJ, Townsend JP, Bøhn T, Simonsen GS, Sundsfjord A, Nielsen KM. Factors affecting the reversal of antimicrobial-drug resistance. The Lancet. Infectious Diseases. 9: 357-64. PMID 19467475 DOI: 10.1016/S1473-3099(09)70105-7 |
0.072 |
|
| 2020 |
Townsend J, Pandey A, Tang AB, Chen Y, Foster EM, Nathwani D, Merchant S, Sarpong E, Fitzpatrick MC, Galvani A. 85. The Impact of Carbapenem-Sparing Interventions on the Evolution of Resistance in Pseudomonas aeruginosa in the USA Open Forum Infectious Diseases. 7: S59-S60. DOI: 10.1093/ofid/ofaa439.130 |
0.072 |
|
| 2015 |
Townsend JP, Skrip LA, Galvani AP. Impact of bed capacity on spatiotemporal shifts in Ebola transmission. Proceedings of the National Academy of Sciences of the United States of America. PMID 26518509 DOI: 10.1073/Pnas.1518484112 |
0.068 |
|
| 2020 |
Yang A, Cross CN, Townsend JP. Non-Coding Mutations in Urothelial Bladder Cancer: Biological and Clinical Relevance and Potential Utility as Biomarkers. Bladder Cancer (Amsterdam, Netherlands). 6: 211-213. PMID 32793790 DOI: 10.3233/BLC-200278 |
0.068 |
|
| 2020 |
Yang A, Cross CN, Townsend JP. Non-Coding Mutations in Urothelial Bladder Cancer: Biological and Clinical Relevance and Potential Utility as Biomarkers Bladder Cancer. 6: 211-213. DOI: 10.3233/blc-200278 |
0.068 |
|
| 2020 |
Wells CR, Townsend JP, Pandey A, Krieger G, Singer BH, McDonald RH, Moghadas SM, Galvani AP. Optimal COVID-19 quarantine and testing strategies. Medrxiv : the Preprint Server For Health Sciences. PMID 33173923 DOI: 10.1101/2020.10.27.20211631 |
0.068 |
|
| 2008 |
Ramirez CL, Foley JE, Wright DA, Müller-Lerch F, Rahman SH, Cornu TI, Winfrey RJ, Sander JD, Fu F, Townsend JA, Cathomen T, Voytas DF, Joung JK. Unexpected failure rates for modular assembly of engineered zinc fingers. Nature Methods. 5: 374-5. PMID 18446154 DOI: 10.1038/Nmeth0508-374 |
0.066 |
|
| 2018 |
Marshall BDL, Goedel WC, King MRF, Singleton A, Durham DP, Chan PA, Townsend JP, Galvani AP. Potential effectiveness of long-acting injectable pre-exposure prophylaxis for HIV prevention in men who have sex with men: a modelling study. The Lancet. Hiv. PMID 29908917 DOI: 10.1016/S2352-3018(18)30097-3 |
0.066 |
|
| 2012 |
Fitzpatrick MC, Hampson K, Cleaveland S, Meyers LA, Townsend JP, Galvani AP. Potential for rabies control through dog vaccination in wildlife-abundant communities of Tanzania. Plos Neglected Tropical Diseases. 6: e1796. PMID 22928056 DOI: 10.1371/Journal.Pntd.0001796 |
0.062 |
|
| 2013 |
Ndeffo Mbah ML, Medlock J, Meyers LA, Galvani AP, Townsend JP. Optimal targeting of seasonal influenza vaccination toward younger ages is robust to parameter uncertainty. Vaccine. 31: 3079-89. PMID 23684837 DOI: 10.1016/J.Vaccine.2013.04.052 |
0.06 |
|
| 2022 |
Townsend JP, Hassler HB, Sah P, Galvani AP, Dornburg A. The durability of natural infection and vaccine-induced immunity against future infection by SARS-CoV-2. Proceedings of the National Academy of Sciences of the United States of America. 119: e2204336119. PMID 35858382 DOI: 10.1073/pnas.2204336119 |
0.058 |
|
| 2016 |
Fitzpatrick MC, Shah HA, Pandey A, Bilinski AM, Kakkar M, Clark AD, Townsend JP, Abbas SS, Galvani AP. One Health approach to cost-effective rabies control in India. Proceedings of the National Academy of Sciences of the United States of America. PMID 27994161 DOI: 10.1073/Pnas.1604975113 |
0.058 |
|
| 2015 |
Atkins KE, Wenzel NS, Ndeffo-Mbah M, Altice FL, Townsend JP, Galvani AP. Under-reporting and case fatality estimates for emerging epidemics. Bmj (Clinical Research Ed.). 350: h1115. PMID 25779635 DOI: 10.1136/Bmj.H1115 |
0.058 |
|
| 2020 |
Townsend JP. Getting quantitative on the effects of somatic mutation on cancer. Oncoscience. 7: 83-84. PMID 33457449 DOI: 10.18632/oncoscience.521 |
0.058 |
|
| 2023 |
Townsend JP, Hassler HB, Dornburg A. Infection by SARS-CoV-2 with alternate frequencies of mRNA vaccine boosting. Journal of Medical Virology. PMID 36602045 DOI: 10.1002/jmv.28461 |
0.057 |
|
| 2022 |
Moore M, Zhuo Y, Mandell JD, Gaffney SG, Townsend JP. In Response to "De Novo KRAS G12C-Mutant SCLC: A Case Report". Jto Clinical and Research Reports. 3: 100418. PMID 36590382 DOI: 10.1016/j.jtocrr.2022.100418 |
0.056 |
|
| 2017 |
Gaffney S, Townsend J. Identifying Lung Cancer Pathways Using PathScore Journal of Thoracic Oncology. 12: S1541. DOI: 10.1016/j.jtho.2017.06.042 |
0.055 |
|
| 2021 |
Wells CR, Cao Y, Durham DP, Byrareddy SN, Ansari AA, Ruddle NH, Townsend JP, Galvani AP, Perelson AS. Mechanistic basis of post-treatment control of SIV after anti-α4β7 antibody therapy. Plos Computational Biology. 17: e1009031. PMID 34106916 DOI: 10.1371/journal.pcbi.1009031 |
0.053 |
|
| 2013 |
Dai L, Tian M, Wu J, Xiao J, Wang X, Townsend JP, Zhang Z. AuthorReward: increasing community curation in biological knowledge wikis through automated authorship quantification. Bioinformatics (Oxford, England). 29: 1837-9. PMID 23732274 DOI: 10.1093/Bioinformatics/Btt284 |
0.053 |
|
| 2021 |
Tan C, Mandell JD, Dasari K, Cannataro VL, Alfaro-Murillo JA, Townsend JP. Heavy mutagenesis by tobacco leads to lung adenocarcinoma tumors with KRAS G12 mutations other than G12D, leading KRAS G12D tumors-on average-to exhibit a lower mutation burden. Lung Cancer (Amsterdam, Netherlands). PMID 34736794 DOI: 10.1016/j.lungcan.2021.10.008 |
0.053 |
|
| 2022 |
Wells CR, Pandey A, Moghadas SM, Singer BH, Krieger G, Heron RJL, Turner DE, Abshire JP, Phillips KM, Michael Donoghue A, Galvani AP, Townsend JP. Comparative analyses of eighteen rapid antigen tests and RT-PCR for COVID-19 quarantine and surveillance-based isolation. Communications Medicine. 2: 84. PMID 36380232 DOI: 10.1038/s43856-022-00147-y |
0.052 |
|
| 2022 |
Wells CR, Pandey A, Moghadas SM, Singer BH, Krieger G, Heron RJL, Turner DE, Abshire JP, Phillips KM, Michael Donoghue A, Galvani AP, Townsend JP. Comparative analyses of eighteen rapid antigen tests and RT-PCR for COVID-19 quarantine and surveillance-based isolation. Communications Medicine. 2: 84. PMID 35822105 DOI: 10.1038/s43856-022-00147-y |
0.052 |
|
| 2015 |
Wells C, Yamin D, Ndeffo-Mbah ML, Wenzel N, Gaffney SG, Townsend JP, Meyers LA, Fallah M, Nyenswah TG, Altice FL, Atkins KE, Galvani AP. Correction: Harnessing Case Isolation and Ring Vaccination to Control Ebola. Plos Neglected Tropical Diseases. 9: e0003888. PMID 26107520 DOI: 10.1371/Journal.Pntd.0003888 |
0.05 |
|
| 2021 |
Wells CR, Townsend JP, Pandey A, Moghadas SM, Krieger G, Singer B, McDonald RH, Fitzpatrick MC, Galvani AP. Optimal COVID-19 quarantine and testing strategies. Nature Communications. 12: 356. PMID 33414470 DOI: 10.1038/s41467-020-20742-8 |
0.049 |
|
| 2019 |
Lee JW, Parameswaran J, Sandoval-Schaefer T, Eoh KJ, Yang DH, Zhu F, Mehra R, Sharma R, Gaffney SG, Perry EB, Townsend JP, Serebriiskii IG, Golemis EA, Issaeva N, Yarbrough WG, et al. Combined Aurora kinase A (AURKA) and WEE1 inhibition demonstrates synergistic antitumor effect in squamous cell carcinoma of the head and neck. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 30755439 DOI: 10.1158/1078-0432.Ccr-18-0440 |
0.047 |
|
| 2023 |
Townsend JP, Hassler HB, Emu B, Dornburg A. Infection with alternate frequencies of SARS-CoV-2 vaccine boosting for patients undergoing antineoplastic cancer treatments. Journal of the National Cancer Institute. PMID 37599438 DOI: 10.1093/jnci/djad158 |
0.046 |
|
| 2016 |
Durham DP, Olsen MA, Dubberke ER, Galvani AP, Townsend JP. Quantifying Transmission of Clostridium difficile within and outside Healthcare Settings. Emerging Infectious Diseases. 22: 608-16. PMID 26982504 DOI: 10.3201/Eid2204.150455 |
0.044 |
|
| 2013 |
Ndeffo Mbah ML, Kjetland EF, Atkins KE, Poolman EM, Orenstein EW, Meyers LA, Townsend JP, Galvani AP. Cost-effectiveness of a community-based intervention for reducing the transmission of Schistosoma haematobium and HIV in Africa. Proceedings of the National Academy of Sciences of the United States of America. 110: 7952-7. PMID 23589884 DOI: 10.1073/Pnas.1221396110 |
0.044 |
|
| 2021 |
Gaffney SG, Smaga S, Schepartz A, Townsend JP. Chemsearch: collaborative compound libraries with structure-aware browsing. Bioinformatics Advances. 1: vbab008. PMID 36700113 DOI: 10.1093/bioadv/vbab008 |
0.042 |
|
| 2022 |
Wells CR, Pandey A, Fitzpatrick MC, Crystal WS, Singer BH, Moghadas SM, Galvani AP, Townsend JP. Quarantine and testing strategies to ameliorate transmission due to travel during the COVID-19 pandemic: a modelling study. The Lancet Regional Health. Europe. 100304. PMID 35036981 DOI: 10.1016/j.lanepe.2021.100304 |
0.042 |
|
| 2019 |
Yang A, Cannataro VL, Townsend JP. Re: Ming-Jun Shi, Xiang-Yu Meng, Philippe Lamy, et al. APOBEC-mediated Mutagenesis as a Likely Cause of FGFR3 S249C Mutation Over-representation in Bladder Cancer. Eur Urol 2019;76:9-13. European Urology. PMID 31474441 DOI: 10.1016/J.Eururo.2019.08.018 |
0.042 |
|
| 2022 |
Townsend JP, Wells CR. The Prognostic Value of an RT-PCR Test for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Is Contingent on Timing across Disease Time Course in addition to Assay Sensitivity. The Journal of Molecular Diagnostics : Jmd. 24: 101-103. PMID 34974875 DOI: 10.1016/j.jmoldx.2021.10.002 |
0.041 |
|
| 2015 |
Wells C, Yamin D, Ndeffo-Mbah ML, Wenzel N, Gaffney SG, Townsend JP, Meyers LA, Fallah M, Nyenswah TG, Altice FL, Atkins KE, Galvani AP. Harnessing case isolation and ring vaccination to control ebola. Plos Neglected Tropical Diseases. 9: e0003794. PMID 26024528 DOI: 10.1371/Journal.Pntd.0003794 |
0.04 |
|
| 2016 |
Yamin D, Jones FK, DeVincenzo JP, Gertler S, Kobiler O, Townsend JP, Galvani AP. Vaccination strategies against respiratory syncytial virus. Proceedings of the National Academy of Sciences of the United States of America. PMID 27799521 DOI: 10.1073/Pnas.1522597113 |
0.039 |
|
| 2012 |
Durham DP, Poolman EM, Ibuka Y, Townsend JP, Galvani AP. Reevaluation of epidemiological data demonstrates that it is consistent with cross-immunity among human papillomavirus types. The Journal of Infectious Diseases. 206: 1291-8. PMID 22872732 DOI: 10.1093/Infdis/Jis494 |
0.037 |
|
| 2019 |
Goedel WC, King MRF, Lurie MN, Galea S, Townsend JP, Galvani AP, Friedman SR, Marshall BDL. Implementation of Syringe Services Programs to Prevent Rapid Human Immunodeficiency Virus Transmission in Rural Counties in the United States: A Modeling Study. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 31143944 DOI: 10.1093/Cid/Ciz321 |
0.034 |
|
| 2021 |
Wells CR, Pandey A, Fitzpatrick MC, Crystal WS, Singer BH, Moghadas SM, Galvani AP, Townsend JP. Quarantine and testing strategies to ameliorate transmission due to travel during the COVID-19 pandemic. Medrxiv : the Preprint Server For Health Sciences. PMID 34729563 DOI: 10.1101/2021.04.25.21256082 |
0.033 |
|
| 2016 |
Fitzpatrick MC, Wenzel NS, Scarpino SV, Althouse BM, Atkins KE, Galvani AP, Townsend JP. Cost-effectiveness of next-generation vaccines: The case of pertussis. Vaccine. PMID 27087151 DOI: 10.1016/J.Vaccine.2016.04.010 |
0.031 |
|
| 2003 |
Townsend J. Biodiversity: Exploring Values and Priorities in Conservation. By Dan L Perlman and Glenn Adelson. Oxford and Malden (Massachusetts): Blackwell Science. $49.95 (paper). ix + 182 p + 15 pl; ill.; index. ISBN: 0‐86542‐439‐X. 1997. The Quarterly Review of Biology. 78: 372-373. DOI: 10.1086/380048 |
0.028 |
|
| 2012 |
Shim E, Chapman GB, Townsend JP, Galvani AP. The influence of altruism on influenza vaccination decisions. Journal of the Royal Society, Interface / the Royal Society. 9: 2234-43. PMID 22496100 DOI: 10.1098/Rsif.2012.0115 |
0.026 |
|
| 2015 |
Alfaro-Murillo JA, Townsend JP, Galvani AP. Optimizing age of cytomegalovirus screening and vaccination to avert congenital disease in the US. Vaccine. PMID 26631416 DOI: 10.1016/J.Vaccine.2015.11.039 |
0.025 |
|
| 2013 |
Ndeffo Mbah ML, Poolman EM, Atkins KE, Orenstein EW, Meyers LA, Townsend JP, Galvani AP. Potential cost-effectiveness of schistosomiasis treatment for reducing HIV transmission in Africa--the case of Zimbabwean women. Plos Neglected Tropical Diseases. 7: e2346. PMID 23936578 DOI: 10.1371/Journal.Pntd.0002346 |
0.023 |
|
| 2018 |
Zhao ZM, Wang J, Ugwuowo UC, Wang L, Townsend JP. Primary hepatic neuroendocrine carcinoma: report of two cases and literature review. Bmc Clinical Pathology. 18: 3. PMID 29507528 DOI: 10.1186/S12907-018-0070-7 |
0.021 |
|
| 2016 |
Atkins KE, Fitzpatrick MC, Galvani AP, Townsend JP. Cost-Effectiveness of Pertussis Vaccination During Pregnancy in the United States. American Journal of Epidemiology. PMID 27188951 DOI: 10.1093/Aje/Kwv347 |
0.019 |
|
| 2015 |
Durham DP, Skrip LA, Bruce RD, Vilarinho S, Elbasha EH, Galvani AP, Townsend JP. The Impact of Enhanced Screening and Treatment on Hepatitis C in the United States. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 26628566 DOI: 10.1093/Cid/Civ894 |
0.018 |
|
| 2015 |
Gilbert JA, Long EF, Brooks RP, Friedland GH, Moll AP, Townsend JP, Galvani AP, Shenoi SV. Integrating Community-Based Interventions to Reverse the Convergent TB/HIV Epidemics in Rural South Africa. Plos One. 10: e0126267. PMID 25938501 DOI: 10.1371/Journal.Pone.0126267 |
0.017 |
|
| 2019 |
Cannataro VL, Townsend JP. Wagging the long tail of drivers of prostate cancer. Plos Genetics. 15: e1007820. PMID 30653503 DOI: 10.1371/Journal.Pgen.1007820 |
0.011 |
|
| 2017 |
Townsend JP, Wang Z. Preface. Advances in Genetics. 100: xi-xii. PMID 29153406 DOI: 10.1016/S0065-2660(17)30059-7 |
0.01 |
|
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