Yiming Ye, Ph.D. - Publications

Affiliations: 
2001 Georgia State University, Atlanta, GA, United States 
Area:
Molecular Biology

23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2011 Wei L, Li S, Yang J, Ye Y, Zou J, Wang L, Long R, Zurkiya O, Zhao T, Johnson J, Qiao J, Zhou W, Castiblanco A, Maor N, Chen Y, et al. Protein-based MRI contrast agents for molecular imaging of prostate cancer. Molecular Imaging and Biology : Mib : the Official Publication of the Academy of Molecular Imaging. 13: 416-23. PMID 20574851 DOI: 10.1007/S11307-010-0342-9  0.694
2010 Zhou Y, Tzeng WP, Wong HC, Ye Y, Jiang J, Chen Y, Huang Y, Suppiah S, Frey TK, Yang JJ. Calcium-dependent association of calmodulin with the rubella virus nonstructural protease domain. The Journal of Biological Chemistry. 285: 8855-68. PMID 20086014 DOI: 10.1074/Jbc.M109.097063  0.804
2009 Chen N, Ye Y, Zou J, Li S, Wang S, Martin A, Wohlhueter R, Yang JJ. Fluorescence complementation via EF-hand interactions. Journal of Biotechnology. 142: 205-13. PMID 19500621 DOI: 10.1016/J.Jbiotec.2009.05.007  0.646
2009 Chen N, Zou J, Wang S, Ye Y, Huang Y, Gadda G, Yang JJ. Designing protease sensors for real-time imaging of trypsin activation in pancreatic cancer cells. Biochemistry. 48: 3519-26. PMID 19271729 DOI: 10.1021/Bi802289V  0.588
2009 Zhou Y, Tzeng WP, Ye Y, Huang Y, Li S, Chen Y, Frey TK, Yang JJ. A cysteine-rich metal-binding domain from rubella virus non-structural protein is essential for viral protease activity and virus replication. The Biochemical Journal. 417: 477-83. PMID 18795894 DOI: 10.1042/Bj20081468  0.793
2007 Zou J, Hofer AM, Lurtz MM, Gadda G, Ellis AL, Chen N, Huang Y, Holder A, Ye Y, Louis CF, Welshhans K, Rehder V, Yang JJ. Developing sensors for real-time measurement of high Ca2+ concentrations. Biochemistry. 46: 12275-88. PMID 17924653 DOI: 10.1021/Bi7007307  0.759
2007 Zhou Y, Yang W, Lurtz MM, Ye Y, Huang Y, Lee HW, Chen Y, Louis CF, Yang JJ. Identification of the calmodulin binding domain of connexin 43. The Journal of Biological Chemistry. 282: 35005-17. PMID 17901047 DOI: 10.1074/Jbc.M707728200  0.783
2007 Zhou Y, Tzeng WP, Yang W, Zhou Y, Ye Y, Lee HW, Frey TK, Yang J. Identification of a Ca2+-binding domain in the rubella virus nonstructural protease. Journal of Virology. 81: 7517-28. PMID 17475644 DOI: 10.1128/Jvi.00605-07  0.81
2006 Carroll A, Yang W, Ye Y, Simmons R, Yang JJ. Amyloid fibril formation by a domain of rat cell adhesion molecule. Cell Biochemistry and Biophysics. 44: 241-9. PMID 16456226 DOI: 10.1385/Cbb:44:2:241  0.57
2005 Yang W, Wilkins AL, Li S, Ye Y, Yang JJ. The effects of Ca2+ binding on the dynamic properties of a designed Ca2+-binding protein. Biochemistry. 44: 8267-73. PMID 15938616 DOI: 10.1021/Bi050463N  0.7
2005 Zou J, Ye Y, Welshhans K, Lurtz M, Ellis AL, Louis C, Rehder V, Yang JJ. Expression and optical properties of green fluorescent protein expressed in different cellular environments. Journal of Biotechnology. 119: 368-78. PMID 15935502 DOI: 10.1016/J.Jbiotec.2005.04.001  0.73
2005 Ye Y, Lee HW, Yang W, Yang JJ. Calcium and lanthanide affinity of the EF-loops from the C-terminal domain of calmodulin. Journal of Inorganic Biochemistry. 99: 1376-83. PMID 15917089 DOI: 10.1016/J.Jinorgbio.2005.03.011  0.804
2005 Ye Y, Lee HW, Yang W, Shealy S, Yang JJ. Probing site-specific calmodulin calcium and lanthanide affinity by grafting. Journal of the American Chemical Society. 127: 3743-50. PMID 15771508 DOI: 10.1021/Ja042786X  0.801
2005 Yang W, Wilkins AL, Ye Y, Liu ZR, Li SY, Urbauer JL, Hellinga HW, Kearney A, van der Merwe PA, Yang JJ. Design of a calcium-binding protein with desired structure in a cell adhesion molecule. Journal of the American Chemical Society. 127: 2085-93. PMID 15713084 DOI: 10.1021/Ja0431307  0.714
2003 Yang JJ, Gawthrop A, Ye Y. Obtaining site-specific calcium-binding affinities of calmodulin. Protein and Peptide Letters. 10: 331-45. PMID 14529487 DOI: 10.2174/0929866033478852  0.668
2003 Ye Y, Shealy S, Lee HW, Torshin I, Harrison R, Yang JJ. A grafting approach to obtain site-specific metal-binding properties of EF-hand proteins. Protein Engineering. 16: 429-34. PMID 12874376 DOI: 10.1093/Protein/Gzg051  0.789
2003 Yang W, Jones LM, Isley L, Ye Y, Lee HW, Wilkins A, Liu ZR, Hellinga HW, Malchow R, Ghazi M, Yang JJ. Rational design of a calcium-binding protein. Journal of the American Chemical Society. 125: 6165-71. PMID 12785848 DOI: 10.1021/Ja034724X  0.768
2002 Yang JJ, Ye Y, Carroll A, Yang W, Lee HW. Structural biology of the cell adhesion protein CD2: alternatively folded states and structure-function relation. Current Protein & Peptide Science. 2: 1-17. PMID 12369898 DOI: 10.2174/1389203013381251  0.732
2002 Wilkins AL, Ye Y, Yang W, Lee HW, Liu ZR, Yang JJ. Metal-binding studies for a de novo designed calcium-binding protein. Protein Engineering. 15: 571-4. PMID 12200539 DOI: 10.1093/Protein/15.7.571  0.78
2002 Lee HW, Yang W, Ye Y, Liu ZR, Glushka J, Yang JJ. Isolated EF-loop III of calmodulin in a scaffold protein remains unpaired in solution using pulsed-field-gradient NMR spectroscopy. Biochimica Et Biophysica Acta. 1598: 80-7. PMID 12147347 DOI: 10.1016/S0167-4838(02)00338-2  0.772
2002 Yang JJ, Yang H, Ye Y, Hopkins H, Hastings G. Temperature-induced formation of a non-native intermediate state of the all beta-sheet protein CD2. Cell Biochemistry and Biophysics. 36: 1-18. PMID 11939369 DOI: 10.1385/Cbb:36:1:01  0.581
2002 Ye Y, Lee HW, Yang W, Shealy SJ, Wilkins AL, Liu ZR, Torshin I, Harrison R, Wohlhueter R, Yang JJ. Metal binding affinity and structural properties of an isolated EF-loop in a scaffold protein. Protein Engineering. 14: 1001-13. PMID 11809931 DOI: 10.1093/Protein/14.12.1001  0.797
2000 Yang JJ, Carroll AR, Yang W, Ye Y, Nguyen CN. Nonnative intermediate state of acid-stable β-sheet protein Cell Biochemistry and Biophysics. 33: 253-273. PMID 11325045 DOI: 10.1385/Cbb:33:3:253  0.588
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