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Kyuha Choi - Publications

Affiliations: 
Pohang University of Science and Technology (POSTECH), Pohang, Gyeongsangbuk-do, South Korea 
Area:
Plant science, meiosis, epigenetics, genomics
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Kim H, Kim J, Son N, Kuo P, Morgan C, Chambon A, Byun D, Park J, Lee Y, Park YM, Fozard JA, Guérin J, Hurel A, Lambing C, Howard M, ... ... Choi K, et al. Control of meiotic crossover interference by a proteolytic chaperone network. Nature Plants. PMID 38379086 DOI: 10.1038/s41477-024-01633-y  0.553
2023 Lee S, Choi J, Park J, Hong CP, Choi D, Han S, Choi K, Roh TY, Hwang D, Hwang I. DDM1-mediated gene body DNA methylation is associated with inducible activation of defense-related genes in Arabidopsis. Genome Biology. 24: 106. PMID 37147734 DOI: 10.1186/s13059-023-02952-7  0.311
2022 Lambing C, Kuo P, Kim J, Osman K, Whitbread AL, Yang J, Choi K, Franklin FCH, Henderson IR. Differentiated function and localisation of SPO11-1 and PRD3 on the chromosome axis during meiotic DSB formation in Arabidopsis thaliana. Plos Genetics. 18: e1010298. PMID 35857772 DOI: 10.1371/journal.pgen.1010298  0.58
2022 Kim J, Park J, Kim H, Son N, Kim EJ, Kim J, Byun D, Lee Y, Park YM, Nageswaran DC, Kuo P, Rose T, Dang TVT, Hwang I, Lambing C, ... ... Choi K, et al. Arabidopsis HEAT SHOCK FACTOR BINDING PROTEIN is required to limit meiotic crossovers and HEI10 transcription. The Embo Journal. e109958. PMID 35670129 DOI: 10.15252/embj.2021109958  0.554
2022 Byun D, Choi K. High-Throughput Fluorescent Pollen Tetrad Analysis Using DeepTetrad. Methods in Molecular Biology (Clifton, N.J.). 2484: 277-290. PMID 35461458 DOI: 10.1007/978-1-0716-2253-7_19  0.369
2022 Kim H, Choi K. Fast and Precise: How to Measure Meiotic Crossovers in . Molecules and Cells. PMID 35444069 DOI: 10.14348/molcells.2022.2054  0.376
2021 Nageswaran DC, Kim J, Lambing C, Kim J, Park J, Kim EJ, Cho HS, Kim H, Byun D, Park YM, Kuo P, Lee S, Tock AJ, Zhao X, Hwang I, ... Choi K, et al. HIGH CROSSOVER RATE1 encodes PROTEIN PHOSPHATASE X1 and restricts meiotic crossovers in Arabidopsis. Nature Plants. PMID 33846593 DOI: 10.1038/s41477-021-00889-y  0.57
2020 Lambing C, Tock AJ, Topp SD, Choi K, Kuo PC, Zhao X, Osman K, Higgins J, Franklin FCH, Henderson IR. Interacting genomic landscapes of REC8-cohesin, chromatin and meiotic recombination in Arabidopsis thaliana. The Plant Cell. PMID 32024691 DOI: 10.1105/Tpc.19.00866  0.684
2020 Lambing C, Choi K, Blackwell AR, Henderson IR. Chromatin Immunoprecipitation of Meiotically Expressed Proteins from Arabidopsis thaliana Flowers. Methods in Molecular Biology (Clifton, N.J.). 2061: 219-236. PMID 31583663 DOI: 10.1007/978-1-4939-9818-0_16  0.648
2019 Lim EC, Kim J, Park J, Kim EJ, Kim J, Park YM, Cho HS, Byun D, Henderson IR, Copenhaver GP, Hwang I, Choi K. DeepTetrad: high-throughput image analysis of meiotic tetrads by deep learning in Arabidopsis thaliana. The Plant Journal : For Cell and Molecular Biology. PMID 31536659 DOI: 10.1111/Tpj.14543  0.58
2019 Underwood CJ, Choi K. Heterogeneous transposable elements as silencers, enhancers and targets of meiotic recombination. Chromosoma. PMID 31332531 DOI: 10.1007/S00412-019-00718-4  0.711
2019 Kim J, Choi K. Signaling-mediated meiotic recombination in plants. Current Opinion in Plant Biology. 51: 44-50. PMID 31048232 DOI: 10.1016/J.Pbi.2019.04.001  0.526
2018 Serra H, Choi K, Zhao X, Blackwell AR, Kim J, Henderson IR. Interhomolog polymorphism shapes meiotic crossover within the Arabidopsis RAC1 and RPP13 disease resistance genes. Plos Genetics. 14: e1007843. PMID 30543623 DOI: 10.1371/Journal.Pgen.1007843  0.665
2018 Cho H, Cho HS, Nam H, Jo H, Yoon J, Park C, Dang TVT, Kim E, Jeong J, Park S, Wallner ES, Youn H, Park J, Jeon J, Ryu H, ... ... Choi K, et al. Translational control of phloem development by RNA G-quadruplex-JULGI determines plant sink strength. Nature Plants. PMID 29808026 DOI: 10.1038/S41477-018-0157-2  0.351
2018 Choi K, Zhao X, Tock AJ, Lambing C, Underwood CJ, Hardcastle TJ, Serra H, Kim J, Cho HS, Kim J, Ziolkowski PA, Yelina NE, Hwang I, Martienssen RA, Henderson IR. Nucleosomes and DNA methylation shape meiotic DSB frequency intransposons and gene regulatory regions. Genome Research. PMID 29530928 DOI: 10.1101/Gr.225599.117  0.789
2018 Underwood CJ, Choi K, Lambing C, Zhao X, Serra H, Borges F, Simorowski J, Ernst E, Jacob Y, Henderson IR, Martienssen RA. Epigenetic activation of meiotic recombination nearcentromeres via loss of H3K9me2 and non-CG DNA methylation. Genome Research. PMID 29530927 DOI: 10.1101/Gr.227116.117  0.75
2017 Choi K. Advances towards Controlling Meiotic Recombination for Plant Breeding. Molecules and Cells. 40: 814-822. PMID 29179262 DOI: 10.14348/Molcells.2017.0171  0.44
2017 Ziolkowski PA, Underwood CJ, Lambing C, Martinez-Garcia M, Lawrence EJ, Ziolkowska L, Griffin C, Choi K, Franklin FC, Martienssen RA, Henderson IR. Natural variation and dosage of the HEI10 meiotic E3 ligase control Arabidopsis crossover recombination. Genes & Development. PMID 28223312 DOI: 10.1101/Gad.295501.116  0.767
2017 Choi K, Yelina NE, Serra H, Henderson IR. Quantification and Sequencing of Crossover Recombinant Molecules from Arabidopsis Pollen DNA. Methods in Molecular Biology (Clifton, N.J.). 1551: 23-57. PMID 28138839 DOI: 10.1007/978-1-4939-6750-6_2  0.613
2016 Choi K, Reinhard C, Serra H, Ziolkowski PA, Underwood CJ, Zhao X, Hardcastle TJ, Yelina NE, Griffin C, Jackson M, Mézard C, McVean G, Copenhaver GP, Henderson IR. Recombination Rate Heterogeneity within Arabidopsis Disease Resistance Genes. Plos Genetics. 12: e1006179. PMID 27415776 DOI: 10.1371/Journal.Pgen.1006179  0.764
2016 Choi K, Kim J, Müller SY, Oh M, Underwood C, Henderson I, Lee I. Regulation of microRNA-mediated developmental changes by the SWR1 chromatin remodeling complex in Arabidopsis thaliana. Plant Physiology. PMID 27208270 DOI: 10.1104/Pp.16.00332  0.725
2016 Seo E, Park C, Choi K, Lee D, Seok C, Lee I. Molecular evolution of ACTIN RELATED PROTEIN 6, a component of SWR1 complex in Arabidopsis Journal of Plant Biology. 59: 467-477. DOI: 10.1007/S12374-016-0197-Y  0.637
2015 Choi K, Henderson IR. Meiotic recombination hotspots - a comparative view. The Plant Journal : For Cell and Molecular Biology. 83: 52-61. PMID 25925869 DOI: 10.1111/Tpj.12870  0.636
2015 Ziolkowski PA, Berchowitz LE, Lambing C, Yelina NE, Zhao X, Kelly KA, Choi K, Ziolkowska L, June V, Sanchez-Moran E, Franklin C, Copenhaver GP, Henderson IR. Juxtaposition of heterozygous and homozygous regions causes reciprocal crossover remodelling via interference during Arabidopsis meiosis. Elife. 4. PMID 25815584 DOI: 10.7554/Elife.03708  0.721
2014 Amiard S, Olivier M, Allain E, Choi K, Smith-Unna R, Henderson IR, White CI, Gallego ME. Telomere stability and development of ctc1 mutants are rescued by inhibition of EJ recombination pathways in a telomerase-dependent manner. Nucleic Acids Research. 42: 11979-91. PMID 25274733 DOI: 10.1093/Nar/Gku897  0.616
2014 Ziolkowski PA, Berchowitz LE, Lambing C, Yelina NE, Zhao X, Kelly KA, Choi K, Ziolkowska L, June V, Sanchez-Moran E, Franklin C, Copenhaver GP, Henderson IR. Author response: Juxtaposition of heterozygous and homozygous regions causes reciprocal crossover remodelling via interference during Arabidopsis meiosis Elife. DOI: 10.7554/Elife.03708.045  0.593
2013 Choi K, Zhao X, Kelly KA, Venn O, Higgins JD, Yelina NE, Hardcastle TJ, Ziolkowski PA, Copenhaver GP, Franklin FC, McVean G, Henderson IR. Arabidopsis meiotic crossover hot spots overlap with H2A.Z nucleosomes at gene promoters. Nature Genetics. 45: 1327-36. PMID 24056716 DOI: 10.1038/Ng.2766  0.738
2012 Yelina NE, Choi K, Chelysheva L, Macaulay M, de Snoo B, Wijnker E, Miller N, Drouaud J, Grelon M, Copenhaver GP, Mezard C, Kelly KA, Henderson IR. Epigenetic remodeling of meiotic crossover frequency in Arabidopsis thaliana DNA methyltransferase mutants. Plos Genetics. 8: e1002844. PMID 22876192 DOI: 10.1371/Journal.Pgen.1002844  0.642
2011 Choi K, Kim J, Hwang HJ, Kim S, Park C, Kim SY, Lee I. The FRIGIDA complex activates transcription of FLC, a strong flowering repressor in Arabidopsis, by recruiting chromatin modification factors. The Plant Cell. 23: 289-303. PMID 21282526 DOI: 10.1105/Tpc.110.075911  0.673
2007 Choi K, Park C, Lee J, Oh M, Noh B, Lee I. Arabidopsis homologs of components of the SWR1 complex regulate flowering and plant development. Development (Cambridge, England). 134: 1931-41. PMID 17470967 DOI: 10.1242/Dev.001891  0.711
2006 Kim S, Choi K, Park C, Hwang HJ, Lee I. SUPPRESSOR OF FRIGIDA4, encoding a C2H2-Type zinc finger protein, represses flowering by transcriptional activation of Arabidopsis FLOWERING LOCUS C. The Plant Cell. 18: 2985-98. PMID 17138694 DOI: 10.1105/Tpc.106.045179  0.679
2005 Choi K, Kim S, Kim SY, Kim M, Hyun Y, Lee H, Choe S, Kim SG, Michaels S, Lee I. SUPPRESSOR of FRIGIDA3 encodes a nuclear ACTIN-RELATED PROTEIN6 required for floral repression in Arabidopsis Plant Cell. 17: 2647-2660. PMID 16155178 DOI: 10.1105/Tpc.105.035485  0.707
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