Tao Jiang - Publications

Affiliations: 
University of California, Riverside, Riverside, CA, United States 

29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Jiang T, Yin Z, Cai R, Yu H, Lu Q, Zhao S, Tian Y, Yan Y, Chen X, Guo J. Chromosomal-level Genome Assembly of a True Bug, Aspongopus chinensis Dallas, 1851 (Hemiptera: Dinidoridae). Genome Biology and Evolution. PMID 34623414 DOI: 10.1093/gbe/evab232  0.304
2021 Li G, Jiang T, Li J, Wang Y. PanSVR: Pan-Genome Augmented Short Read Realignment for Sensitive Detection of Structural Variations. Frontiers in Genetics. 12: 731515. PMID 34490049 DOI: 10.3389/fgene.2021.731515  0.333
2021 Liu Y, Jiang T, Gao Y, Liu B, Zang T, Wang Y. Psi-Caller: A Lightweight Short Read-Based Variant Caller With High Speed and Accuracy. Frontiers in Cell and Developmental Biology. 9: 731424. PMID 34485311 DOI: 10.3389/fcell.2021.731424  0.311
2019 Jiang T, Fu Y, Liu B, Wang Y. Long-Read based Novel Sequence Insertion Detection with rCANID. Ieee Transactions On Nanobioscience. PMID 30946672 DOI: 10.1109/TNB.2019.2908438  0.329
2016 Xie M, Wu Q, Wang J, Jiang T. H-PoP and H-PoPG: Heuristic Partitioning Algorithms for Single Individual Haplotyping of Polyploids. Bioinformatics (Oxford, England). PMID 27531103 DOI: 10.1093/bioinformatics/btw537  0.49
2015 Muñoz-Amatriaín M, Lonardi S, Luo M, Madishetty K, Svensson JT, Moscou MJ, Wanamaker S, Jiang T, Kleinhofs A, Muehlbauer GJ, Wise RP, Stein N, Ma Y, Rodriguez E, Kudrna D, et al. Sequencing of 15,622 gene-bearing BACs clarifies the gene-dense regions of the barley genome. The Plant Journal : For Cell and Molecular Biology. PMID 26252423 DOI: 10.1111/Tpj.12959  0.307
2014 Bao E, Jiang T, Girke T. AlignGraph: Algorithm for secondary de novo genome assembly guided by closely related references Bioinformatics. 30. PMID 24932000 DOI: 10.1093/Bioinformatics/Btu291  0.673
2013 Yang EW, Girke T, Jiang T. Differential gene expression analysis using coexpression and RNA-Seq data. Bioinformatics (Oxford, England). 29: 2153-61. PMID 23793751 DOI: 10.1093/Bioinformatics/Btt363  0.562
2013 O'Rawe J, Jiang T, Sun G, Wu Y, Wang W, Hu J, Bodily P, Tian L, Hakonarson H, Johnson WE, Wei Z, Wang K, Lyon GJ. Low concordance of multiple variant-calling pipelines: practical implications for exome and genome sequencing. Genome Medicine. 5: 28. PMID 23537139 DOI: 10.1186/Gm432  0.326
2013 Bao E, Jiang T, Girke T. BRANCH: Boosting RNA-Seq assemblies with partial or related genomic sequences Bioinformatics. 29: 1250-1259. PMID 23493323 DOI: 10.1093/Bioinformatics/Btt127  0.68
2012 Xie M, Wang J, Jiang T. A fast and accurate algorithm for single individual haplotyping. Bmc Systems Biology. S8. PMID 23282221 DOI: 10.1186/1752-0509-6-S2-S8  0.464
2012 Tanaseichuk O, Borneman J, Jiang T. Separating metagenomic short reads into genomes via clustering. Algorithms For Molecular Biology : Amb. 7: 27. PMID 23009059 DOI: 10.1186/1748-7188-7-27  0.36
2011 Jiang T, Yang L, Jiang H, Tian G, Zhang X. High-performance single-chip exon capture allows accurate whole exome sequencing using the Illumina Genome Analyzer. Science China. Life Sciences. 54: 945-52. PMID 22038007 DOI: 10.1007/s11427-011-4232-4  0.317
2011 Bao E, Jiang T, Kaloshian I, Girke T. SEED: efficient clustering of next-generation sequences. Bioinformatics (Oxford, England). 27: 2502-9. PMID 21810899 DOI: 10.1093/Bioinformatics/Btr447  0.657
2010 Hudson TJ, Anderson W, Artez A, Barker AD, Bell C, Bernabé RR, Bhan MK, Calvo F, Eerola I, Gerhard DS, Guttmacher A, Guyer M, Hemsley FM, Jennings JL, ... ... Jiang T, et al. International network of cancer genome projects. Nature. 464: 993-8. PMID 20393554 DOI: 10.1038/Nature08987  0.413
2010 Cao Y, Jiang T, Girke T. Accelerated similarity searching and clustering of large compound sets by geometric embedding and locality sensitive hashing. Bioinformatics (Oxford, England). 26: 953-9. PMID 20179075 DOI: 10.1093/Bioinformatics/Btq067  0.607
2009 Han JF, Jiang T, Chen SP, Yu M, Qin ED, Zhao Z, Li XF, Qin CF, Deng YQ, Zhao H, Zha HL, Li XY. [Construction of genomic full-length cDNA of SARS coronavirus BJ01 strain and identification of its biological characteristics]. Wei Sheng Wu Xue Bao = Acta Microbiologica Sinica. 46: 922-7. PMID 17302155  0.311
2008 Cao Y, Charisi A, Cheng LC, Jiang T, Girke T. ChemmineR: a compound mining framework for R. Bioinformatics (Oxford, England). 24: 1733-4. PMID 18596077 DOI: 10.1093/Bioinformatics/Btn307  0.604
2008 Cao Y, Jiang T, Girke T. A maximum common substructure-based algorithm for searching and predicting drug-like compounds. Bioinformatics (Oxford, England). 24: i366-74. PMID 18586736 DOI: 10.1093/bioinformatics/btn186  0.58
2008 Fu Z, Jiang T. Clustering of main orthologs for multiple genomes. Journal of Bioinformatics and Computational Biology. 6: 573-84. PMID 18574863 DOI: 10.1142/S0219720008003540  0.312
2008 Fu Z, Chen X, Vacic V, Nan P, Zhong Y, Jiang T. MSOAR: a high-throughput ortholog assignment system based on genome rearrangement. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 14: 1160-75. PMID 17990975 DOI: 10.1089/cmb.2007.0048  0.314
2007 Fu Z, Jiang T. Clustering of main orthologs for multiple genomes Computational Systems Bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference. 6: 195-201. PMID 17951824  0.314
2005 Chen X, Zheng J, Fu Z, Nan P, Zhong Y, Lonardi S, Jiang T. Assignment of orthologous genes via genome rearrangement. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 2: 302-15. PMID 17044168 DOI: 10.1109/Tcbb.2005.48  0.442
2004 Zheng J, Close TJ, Jiang T, Lonardi S. Efficient selection of unique and popular oligos for large EST databases. Bioinformatics (Oxford, England). 20: 2101-12. PMID 15059835 DOI: 10.1093/Bioinformatics/Bth210  0.354
2003 Qin E, Zhu Q, Yu M, Fan B, Chang G, Si B, Yang B, Peng W, Jiang T, Liu B, Deng Y, Liu H, Zhang Y, Wang C, Li Y, et al. A complete sequence and comparative analysis of a SARS-associated virus (Isolate BJ01). Chinese Science Bulletin = Kexue Tongbao. 48: 941-948. PMID 32214698 DOI: 10.1007/Bf03184203  0.331
2003 Qin E, He X, Tian W, Liu Y, Li W, Wen J, Wang J, Fan B, Wu Q, Chang G, Cao W, Xu Z, Yang R, Wang J, Yu M, ... ... Jiang T, et al. A genome sequence of novel SARS-CoV isolates: the genotype, GD-Ins29, leads to a hypothesis of viral transmission in South China. Genomics, Proteomics & Bioinformatics. 1: 101-7. PMID 15626340 DOI: 10.1016/S1672-0229(03)01014-3  0.323
2003 Vogl C, Badger J, Kearney P, Li M, Clegg M, Jiang T. Probabilistic analysis indicates discordant gene trees in chloroplast evolution Journal of Molecular Evolution. 56: 330-340. PMID 12612836 DOI: 10.1007/S00239-002-2404-3  0.31
2003 Lin YL, Huang X, Jiang T, Chao KM. MAVG: locating non-overlapping maximum average segments in a given sequence. Bioinformatics (Oxford, England). 19: 151-2. PMID 12499306  0.343
2002 Valinsky L, Della Vedova G, Jiang T, Borneman J. Oligonucleotide fingerprinting of rRNA genes for analysis of fungal community composition. Applied and Environmental Microbiology. 68: 5999-6004. PMID 12450821 DOI: 10.1128/Aem.68.12.5999-6004.2002  0.341
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