| Year |
Citation |
Score |
| 2022 |
Cupples AM, Li Z, Wilson FP, Ramalingam V, Kelly A. In silico analysis of soil, sediment and groundwater microbial communities to predict biodegradation potential. Journal of Microbiological Methods. 202: 106595. PMID 36208772 DOI: 10.1016/j.mimet.2022.106595 |
0.342 |
|
| 2021 |
Dang H, Cupples AM. Identification of the phylotypes involved in cis-dichloroethene and 1,4-dioxane biodegradation in soil microcosms. The Science of the Total Environment. 794: 148690. PMID 34198077 DOI: 10.1016/j.scitotenv.2021.148690 |
0.381 |
|
| 2021 |
Dang H, Cupples AM. Identification of the phylotypes involved in cis-dichloroethene and 1,4-dioxane biodegradation in soil microcosms. The Science of the Total Environment. 794: 148690. PMID 34198077 DOI: 10.1016/j.scitotenv.2021.148690 |
0.381 |
|
| 2020 |
Ramalingam V, Cupples AM. Anaerobic 1,4-dioxane biodegradation and microbial community analysis in microcosms inoculated with soils or sediments and different electron acceptors. Applied Microbiology and Biotechnology. PMID 32170385 DOI: 10.1007/S00253-020-10512-3 |
0.482 |
|
| 2020 |
Ramalingam V, Cupples AM. Enrichment of novel Actinomycetales and the detection of monooxygenases during aerobic 1,4-dioxane biodegradation with uncontaminated and contaminated inocula. Applied Microbiology and Biotechnology. PMID 31956944 DOI: 10.1007/S00253-020-10376-7 |
0.493 |
|
| 2019 |
Fang Y, Vanzin G, Cupples AM, Strathmann TJ. Influence of terminal electron-accepting conditions on the soil microbial community and degradation of organic contaminants of emerging concern. The Science of the Total Environment. 706: 135327. PMID 31846887 DOI: 10.1016/J.Scitotenv.2019.135327 |
0.452 |
|
| 2019 |
Collier JM, Chai B, Cole JR, Michalsen MM, Cupples AM. High throughput quantification of the functional genes associated with RDX biodegradation using the SmartChip real-time PCR system. Applied Microbiology and Biotechnology. PMID 31352507 DOI: 10.1007/S00253-019-10022-X |
0.382 |
|
| 2019 |
Thelusmond JR, Strathmann TJ, Cupples AM. Carbamazepine, triclocarban and triclosan biodegradation and the phylotypes and functional genes associated with xenobiotic degradation in four agricultural soils. The Science of the Total Environment. 657: 1138-1149. PMID 30677881 DOI: 10.1016/J.Scitotenv.2018.12.145 |
0.463 |
|
| 2018 |
Dang H, Kanitkar YH, Stedtfeld RD, Hatzinger PB, Hashsham SA, Cupples AM. Abundance of Chlorinated Solvent and 1,4-Dioxane Degrading Microorganisms at Five Chlorinated Solvent Contaminated Sites Determined via Shotgun Sequencing. Environmental Science & Technology. PMID 30427665 DOI: 10.1021/Acs.Est.8B04895 |
0.392 |
|
| 2018 |
Thelusmond JR, Kawka E, Strathmann TJ, Cupples AM. Diclofenac, carbamazepine and triclocarban biodegradation in agricultural soils and the microorganisms and metabolic pathways affected. The Science of the Total Environment. 640: 1393-1410. PMID 30021306 DOI: 10.1016/J.Scitotenv.2018.05.403 |
0.434 |
|
| 2018 |
Liu X, Wu Y, Wilson FP, Yu K, Lintner C, Cupples AM, Mattes TE. Integrated methodological approach reveals microbial diversity and functions in aerobic groundwater microcosms adapted to vinyl chloride. Fems Microbiology Ecology. PMID 29945195 DOI: 10.1093/Femsec/Fiy124 |
0.405 |
|
| 2017 |
Kanitkar YH, Stedtfeld RD, Hatzinger PB, Hashsham SA, Cupples AM. Most probable number with visual based LAMP for the quantification of reductive dehalogenase genes in groundwater samples. Journal of Microbiological Methods. 143: 44-49. PMID 29031631 DOI: 10.1016/J.Mimet.2017.10.003 |
0.407 |
|
| 2017 |
Kanitkar YH, Stedtfeld RD, Hatzinger PB, Hashsham SA, Cupples AM. Development and application of a rapid, user-friendly, and inexpensive method to detect Dehalococcoides sp. reductive dehalogenase genes from groundwater. Applied Microbiology and Biotechnology. PMID 28238079 DOI: 10.1007/S00253-017-8203-Y |
0.402 |
|
| 2016 |
Ahmad F, Stedtfeld RD, Waseem H, Williams MR, Cupples AM, Tiedje JM, Hashsham SA. Most probable number - loop mediated isothermal amplification (MPN-LAMP) for quantifying waterborne pathogens in <25min. Journal of Microbiological Methods. 132: 27-33. PMID 27856278 DOI: 10.1016/J.Mimet.2016.11.010 |
0.33 |
|
| 2016 |
Stedtfeld RD, Stedtfeld TM, Samhan F, Kanitkar YH, Hatzinger PB, Cupples AM, Hashsham SA. Direct loop mediated isothermal amplification on filters for quantification of Dehalobacter in groundwater. Journal of Microbiological Methods. PMID 27720723 DOI: 10.1016/J.Mimet.2016.09.025 |
0.364 |
|
| 2016 |
Thelusmond JR, Strathmann TJ, Cupples AM. The identification of carbamazepine biodegrading phylotypes and phylotypes sensitive to carbamazepine exposure in two soil microbial communities. The Science of the Total Environment. PMID 27481454 DOI: 10.1016/J.Scitotenv.2016.07.154 |
0.419 |
|
| 2016 |
Wilson FP, Liu X, Mattes TE, Cupples AM. Nocardioides, Sediminibacterium, Aquabacterium, Variovorax, and Pseudomonas linked to carbon uptake during aerobic vinyl chloride biodegradation. Environmental Science and Pollution Research International. PMID 27343076 DOI: 10.1007/S11356-016-7099-X |
0.46 |
|
| 2016 |
Wilson FP, Cupples AM. Microbial community characterization and functional gene quantification in RDX-degrading microcosms derived from sediment and groundwater at two naval sites. Applied Microbiology and Biotechnology. PMID 27118012 DOI: 10.1007/S00253-016-7559-8 |
0.389 |
|
| 2016 |
Kanitkar YH, Stedtfeld RD, Steffan RJ, Hashsham SA, Cupples AM. Development of Loop Mediated Isothermal Amplification (LAMP) for Rapid Detection and Quantification of Dehalococcoides spp. Biomarker Genes in Commercial Reductive Dechlorinating Cultures KB-1 and SDC-9. Applied and Environmental Microbiology. PMID 26746711 DOI: 10.1128/Aem.03660-15 |
0.425 |
|
| 2016 |
Cupples AM. Contaminant-Degrading Microorganisms Identified Using Stable Isotope Probing Chemical Engineering and Technology. DOI: 10.1002/Ceat.201500479 |
0.455 |
|
| 2015 |
Paes F, Liu X, Mattes TE, Cupples AM. Elucidating carbon uptake from vinyl chloride using stable isotope probing and Illumina sequencing. Applied Microbiology and Biotechnology. 99: 7735-43. PMID 25981993 DOI: 10.1007/S00253-015-6606-1 |
0.408 |
|
| 2015 |
Jayamani I, Cupples AM. A comparative study of microbial communities in four soil slurries capable of RDX degradation using illumina sequencing. Biodegradation. 26: 247-57. PMID 25913213 DOI: 10.1007/S10532-015-9731-8 |
0.434 |
|
| 2015 |
Jayamani I, Cupples AM. Stable isotope probing reveals the importance of Comamonas and Pseudomonadaceae in RDX degradation in samples from a Navy detonation site. Environmental Science and Pollution Research International. 22: 10340-50. PMID 25721530 DOI: 10.1007/S11356-015-4256-6 |
0.409 |
|
| 2015 |
Song Y, Xiao L, Jayamani I, He Z, Cupples AM. A novel method to characterize bacterial communities affected by carbon source and electricity generation in microbial fuel cells using stable isotope probing and Illumina sequencing. Journal of Microbiological Methods. 108: 4-11. PMID 25448023 DOI: 10.1016/J.Mimet.2014.10.010 |
0.302 |
|
| 2015 |
Ding L, Cupples AM. The effect of the potential fuel additive isobutanol on benzene, toluene, ethylbenzene, and p-xylene degradation in aerobic soil microcosms. Environmental Technology. 36: 237-44. PMID 25413118 DOI: 10.1080/09593330.2014.943298 |
0.406 |
|
| 2015 |
Jayamani I, Cupples AM. Stable isotope probing and high-throughput sequencing implicate xanthomonadaceae and rhodocyclaceae in ethylbenzene degradation Environmental Engineering Science. 32: 240-249. DOI: 10.1089/ees.2014.0456 |
0.357 |
|
| 2014 |
Stedtfeld RD, Stedtfeld TM, Kronlein M, Seyrig G, Steffan RJ, Cupples AM, Hashsham SA. DNA extraction-free quantification of Dehalococcoides spp. in groundwater using a hand-held device. Environmental Science & Technology. 48: 13855-63. PMID 25360694 DOI: 10.1021/Es503472H |
0.397 |
|
| 2014 |
Sun W, Sun X, Cupples AM. Presence, diversity and enumeration of functional genes (bssA and bamA) relating to toluene degradation across a range of redox conditions and inoculum sources. Biodegradation. 25: 189-203. PMID 23728713 DOI: 10.1007/S10532-013-9651-4 |
0.389 |
|
| 2014 |
Sun W, Sun X, Cupples AM. Identification of Desulfosporosinus as toluene-assimilating microorganisms from a methanogenic consortium International Biodeterioration and Biodegradation. 88: 13-19. DOI: 10.1016/J.Ibiod.2013.11.014 |
0.419 |
|
| 2013 |
Jayamani I, Cupples AM. Effect of isobutanol on toluene biodegradation in nitrate amended, sulfate amended and methanogenic enrichment microcosms. Biodegradation. 24: 657-63. PMID 23224907 DOI: 10.1007/S10532-012-9613-2 |
0.354 |
|
| 2013 |
Cupples AM. RDX degrading microbial communities and the prediction of microorganisms responsible for RDX bioremediation International Biodeterioration and Biodegradation. 85: 260-270. DOI: 10.1016/J.Ibiod.2013.08.002 |
0.433 |
|
| 2013 |
Jayamani I, Manzella MP, Cupples AM. RDX degradation potential in soils previously unexposed to RDX and the identification of RDX-degrading species in one agricultural soil using stable isotope probing Water, Air, and Soil Pollution. 224. DOI: 10.1007/S11270-013-1745-4 |
0.48 |
|
| 2012 |
Sun W, Sun X, Cupples AM. Anaerobic methyl tert-butyl ether-degrading microorganisms identified in wastewater treatment plant samples by stable isotope probing. Applied and Environmental Microbiology. 78: 2973-80. PMID 22327600 DOI: 10.1128/Aem.07253-11 |
0.419 |
|
| 2012 |
Sun W, Cupples AM. Diversity of five anaerobic toluene-degrading microbial communities investigated using stable isotope probing. Applied and Environmental Microbiology. 78: 972-80. PMID 22156434 DOI: 10.1128/Aem.06770-11 |
0.49 |
|
| 2012 |
Cha J, Cupples AM. Determination of triclocarban and triclosan in biosolid and soil samples by application of pressurized liquid extraction and liquid chromatography with tandem mass spectrometry Geosystem Engineering. 15: 280-291. DOI: 10.1080/12269328.2012.732316 |
0.369 |
|
| 2011 |
Cupples AM. The use of nucleic acid based stable isotope probing to identify the microorganisms responsible for anaerobic benzene and toluene biodegradation. Journal of Microbiological Methods. 85: 83-91. PMID 21356251 DOI: 10.1016/J.Mimet.2011.02.011 |
0.387 |
|
| 2011 |
Xie S, Sun W, Luo C, Cupples AM. Novel aerobic benzene degrading microorganisms identified in three soils by stable isotope probing. Biodegradation. 22: 71-81. PMID 20549308 DOI: 10.1007/S10532-010-9377-5 |
0.481 |
|
| 2010 |
Cha J, Cupples AM. Triclocarban and triclosan biodegradation at field concentrations and the resulting leaching potentials in three agricultural soils. Chemosphere. 81: 494-9. PMID 20705327 DOI: 10.1016/J.Chemosphere.2010.07.040 |
0.36 |
|
| 2010 |
Sun W, Xie S, Luo C, Cupples AM. Direct link between toluene degradation in contaminated-site microcosms and a Polaromonas strain. Applied and Environmental Microbiology. 76: 956-9. PMID 20008173 DOI: 10.1128/Aem.01364-09 |
0.446 |
|
| 2010 |
Xie S, Sun W, Luo C, Cupples AM. Stable isotope probing identifies novel m-xylene degraders in soil microcosms from contaminated and uncontaminated sites Water, Air, and Soil Pollution. 212: 113-122. DOI: 10.1007/S11270-010-0326-Z |
0.437 |
|
| 2009 |
Luo C, Xie S, Sun W, Li X, Cupples AM. Identification of a novel toluene-degrading bacterium from the candidate phylum TM7, as determined by DNA stable isotope probing. Applied and Environmental Microbiology. 75: 4644-7. PMID 19447956 DOI: 10.1128/Aem.00283-09 |
0.441 |
|
| 2009 |
Cha J, Cupples AM. Detection of the antimicrobials triclocarban and triclosan in agricultural soils following land application of municipal biosolids. Water Research. 43: 2522-30. PMID 19327812 DOI: 10.1016/J.Watres.2009.03.004 |
0.378 |
|
| 2008 |
Cupples AM. Real-time PCR quantification of Dehalococcoides populations: methods and applications. Journal of Microbiological Methods. 72: 1-11. PMID 18077025 DOI: 10.1016/J.Mimet.2007.11.005 |
0.368 |
|
| 2007 |
Cupples AM, Shaffer EA, Chee-Sanford JC, Sims GK. DNA buoyant density shifts during 15N-DNA stable isotope probing. Microbiological Research. 162: 328-34. PMID 16563712 DOI: 10.1016/J.Micres.2006.01.016 |
0.345 |
|
| 2007 |
Cupples AM, Sims GK. Identification of in situ 2,4-dichlorophenoxyacetic acid-degrading soil microorganisms using DNA-stable isotope probing Soil Biology and Biochemistry. 39: 232-238. DOI: 10.1016/J.Soilbio.2006.07.011 |
0.437 |
|
| 2007 |
Shaffer E, Pirnie M, Sims G, Cupples AM, Smyth C, Chee-Sanford J. Atrazine biodegradation as related to the physiochemical properties of a cisne soil from a major atrazine spill site: Atrazine biodegradation in a cisne soil exposed to a major spill Association For Environmental Health and Sciences - 23rd Annual International Conference On Soils, Sediments and Water 2007. 13: 380-402. |
0.346 |
|
| 2005 |
Cupples AM, Sanford RA, Sims GK. Dehalogenation of the herbicides bromoxynil (3,5-dibromo-4-hydroxybenzonitrile) and ioxynil (3,5-diiodino-4-hydroxybenzonitrile) by Desulfitobacterium chlororespirans. Applied and Environmental Microbiology. 71: 3741-6. PMID 16000784 DOI: 10.1128/Aem.71.7.3741-3746.2005 |
0.354 |
|
| 2005 |
Cupples AM. Principles and Applications of Soil Microbiology, Second Edition Journal of Environmental Quality. 34: 731-732. DOI: 10.2134/Jeq2005.0731Dup |
0.352 |
|
| 2004 |
Cupples AM, Spormann AM, McCarty PL. Comparative evaluation of chloroethene dechlorination to ethene by Dehalococcoides-like microorganisms. Environmental Science & Technology. 38: 4768-74. PMID 15487786 DOI: 10.1021/Es049965Z |
0.537 |
|
| 2004 |
Cupples AM, Spormann AM, McCarty PL. Vinyl chloride and cis-dichloroethene dechlorination kinetics and microorganism growth under substrate limiting conditions. Environmental Science & Technology. 38: 1102-7. PMID 14998024 DOI: 10.1021/Es0348647 |
0.538 |
|
| 2003 |
Cupples AM, Spormann AM, McCarty PL. Growth of a Dehalococcoides-like microorganism on vinyl chloride and cis-dichloroethene as electron acceptors as determined by competitive PCR. Applied and Environmental Microbiology. 69: 953-9. PMID 12571017 DOI: 10.1128/Aem.69.2.953-959.2003 |
0.556 |
|
| 2003 |
Cupples AM, Spormann AM, McCarty PL. Erratum: Growth of a Dehalococcoides-like microorganism on vinyl chloride and cis-dichloroethene as electron acceptors as determined by competetive PCR (Applied and Environmental Microbiology (2003) 69:2 (953-959) Applied and Environmental Microbiology. 69. DOI: 10.1128/Aem.69.7.4342.2003 |
0.533 |
|
| 2000 |
Cupples AM, Sims GK, Hultgren RP, Hart SE. Effect of soil conditions on the degradation of cloransulam-methyl Journal of Environmental Quality. 29: 786-794. DOI: 10.2134/Jeq2000.00472425002900030014X |
0.383 |
|
| 1999 |
Sims GK, Cupples AM. Factors controlling degradation of pesticides in soil Pesticide Science. 55: 598-601. DOI: 10.1002/(Sici)1096-9063(199905)55:5<598::Aid-Ps962>3.0.Co;2-N |
0.411 |
|
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