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Krishna Chaitanya Suddala, Ph.D. - Publications

Affiliations: 
2008-2014 Biophysics University of Michigan, Ann Arbor, Ann Arbor, MI 
 2014-2016 Chemistry University of Michigan, Ann Arbor, Ann Arbor, MI 
 2016-2017 Pediatric Infectious Diseases Emory University School of Medicine, Atlanta, GA, United States 
 2018- Laboratory of Molecular Biology, RNP Structure & Mechanisms National Institute of Diabetes and Digestive and Kidney Diseases, NIH 
Area:
RNA dynamics, Riboswitches, Single-molecule FRET, T-box RNAs
Website:
https://www-mslmb.niddk.nih.gov/zhang/krishna.html
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13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Hou Q, Chatterjee S, Lund PE, Suddala KC, Walter NG. Single-molecule FRET observes opposing effects of urea and TMAO on structurally similar meso- and thermophilic riboswitch RNAs. Nucleic Acids Research. PMID 37855661 DOI: 10.1093/nar/gkad866  0.647
2023 Suddala KC, Yoo J, Fan L, Zuo X, Wang YX, Chung HS, Zhang J. Direct observation of tRNA-chaperoned folding of a dynamic mRNA ensemble. Nature Communications. 14: 5438. PMID 37673863 DOI: 10.1038/s41467-023-41155-3  0.593
2019 Suddala KC, Zhang J. High-affinity recognition of specific tRNAs by an mRNA anticodon-binding groove. Nature Structural & Molecular Biology. PMID 31792448 DOI: 10.1038/S41594-019-0335-6  0.52
2019 Suddala KC, Price IR, Dandpat SS, Janeček M, Kührová P, Šponer J, Banáš P, Ke A, Walter NG. Local-to-global signal transduction at the core of a Mn sensing riboswitch. Nature Communications. 10: 4304. PMID 31541094 DOI: 10.1038/S41467-019-12230-5  0.554
2019 Suddala KC, Zhang J. An evolving tale of two interacting RNAs-themes and variations of the T-box riboswitch mechanism. Iubmb Life. PMID 31206978 DOI: 10.1002/Iub.2098  0.532
2018 Suddala KC, Cabello-Villegas J, Michnicka M, Marshall C, Nikonowicz EP, Walter NG. Hierarchical mechanism of amino acid sensing by the T-box riboswitch. Nature Communications. 9: 1896. PMID 29760498 DOI: 10.1038/S41467-018-04305-6  0.581
2015 Suddala KC, Wang J, Hou Q, Walter NG. Mg2+ Shifts Ligand-Mediated Folding of a Riboswitch from Induced-Fit to Conformational Selection. Journal of the American Chemical Society. PMID 26471732 DOI: 10.1021/Jacs.5B09740  0.605
2015 Liberman JA, Suddala KC, Aytenfisu A, Chan D, Belashov IA, Salim M, Mathews DH, Spitale RC, Walter NG, Wedekind JE. Structural analysis of a class III preQ1 riboswitch reveals an aptamer distant from a ribosome-binding site regulated by fast dynamics. Proceedings of the National Academy of Sciences of the United States of America. PMID 26106162 DOI: 10.1073/Pnas.1503955112  0.612
2015 Bartke RM, Cameron EL, Cristie-David AS, Custer TC, Denies MS, Daher M, Dhakal S, Ghosh S, Heinicke LA, Hoff JD, Hou Q, Kahlscheuer ML, Karslake J, Krieger AG, Li J, ... ... Suddala KC, et al. Meeting report: SMART timing-principles of single molecule techniques course at the University of Michigan 2014. Biopolymers. 103: 296-302. PMID 25546606 DOI: 10.1002/Bip.22603  0.608
2015 Rinaldi AJ, Suddala KC, Walter NG. Native purification and labeling of RNA for single molecule fluorescence studies. Methods in Molecular Biology (Clifton, N.J.). 1240: 63-95. PMID 25352138 DOI: 10.1007/978-1-4939-1896-6_6  0.622
2014 Suddala KC, Walter NG. Riboswitch structure and dynamics by smFRET microscopy. Methods in Enzymology. 549: 343-73. PMID 25432756 DOI: 10.1016/B978-0-12-801122-5.00015-5  0.643
2013 Suddala KC, Rinaldi AJ, Feng J, Mustoe AM, Eichhorn CD, Liberman JA, Wedekind JE, Al-Hashimi HM, Brooks CL, Walter NG. Single transcriptional and translational preQ1 riboswitches adopt similar pre-folded ensembles that follow distinct folding pathways into the same ligand-bound structure. Nucleic Acids Research. 41: 10462-75. PMID 24003028 DOI: 10.1093/Nar/Gkt798  0.643
2012 Eichhorn CD, Feng J, Suddala KC, Walter NG, Brooks CL, Al-Hashimi HM. Unraveling the structural complexity in a single-stranded RNA tail: implications for efficient ligand binding in the prequeuosine riboswitch. Nucleic Acids Research. 40: 1345-55. PMID 22009676 DOI: 10.1093/Nar/Gkr833  0.618
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