Paul Keim - Publications

Northern Arizona University, Flagstaff, AZ, United States 
Microbiology Biology, Genetics, Epidemiology

34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Colman RE, Brinkerhoff RJ, Busch JD, Ray C, Doyle A, Sahl JW, Keim P, Collinge SK, Wagner DM. No evidence for enzootic plague within black-tailed prairie dog (Cynomys ludovicianus) populations. Integrative Zoology. PMID 33882192 DOI: 10.1111/1749-4877.12546  0.68
2021 Stone NE, Jaramillo SA, Jones AN, Vazquez AJ, Martz M, Versluis LM, Raniere MO, Nunnally HE, Zarn KE, Nottingham R, Ng KR, Sahl JW, Wagner DM, Knudsen S, Settles EW, ... Keim P, et al. Stenoparib, an Inhibitor of Cellular Poly(ADP-Ribose) Polymerase, Blocks Replication of the SARS-CoV-2 and HCoV-NL63 Human Coronaviruses . Mbio. 12. PMID 33468703 DOI: 10.1128/mBio.03495-20  0.68
2020 Somprasong N, Hall CM, Webb JR, Sahl JW, Wagner DM, Keim P, Currie BJ, Schweizer HP. high-level tetracycline resistance is due to efflux pump synergy involving a novel TetA(64) resistance determinant. Antimicrobial Agents and Chemotherapy. PMID 33318011 DOI: 10.1128/AAC.01767-20  0.68
2020 Martínez Arbas S, Narayanasamy S, Herold M, Lebrun LA, Hoopmann MR, Li S, Lam TJ, Kunath BJ, Hicks ND, Liu CM, Price LB, Laczny CC, Gillece JD, Schupp JM, Keim PS, et al. Roles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics. Nature Microbiology. PMID 33139880 DOI: 10.1038/s41564-020-00794-8  0.56
2020 Somprasong N, Hall CM, Webb JR, Sahl JW, Wagner DM, Keim P, Currie BJ, Schweizer HP. Burkholderia ubonensis Meropenem Resistance: Insights into Distinct Properties of Class A β-Lactamases in Burkholderia cepacia Complex and Burkholderia pseudomallei Complex Bacteria. Mbio. 11. PMID 32291300 DOI: 10.1128/Mbio.00592-20  0.68
2019 Teixeira MM, Alvarado P, Roe CC, Thompson GR, Patané JSL, Sahl JW, Keim P, Galgiani JN, Litvintseva AP, Matute DR, Barker BM. Population Structure and Genetic Diversity among Isolates of in Venezuela and Surrounding Regions. Mbio. 10. PMID 31772050 DOI: 10.1128/Mbio.01976-19  0.56
2019 Hall CM, Jaramillo S, Jimenez R, Stone NE, Centner H, Busch JD, Bratsch N, Roe CC, Gee JE, Hoffmaster AR, Rivera-Garcia S, Soltero F, Ryff K, Perez-Padilla J, Keim P, et al. Burkholderia pseudomallei, the causative agent of melioidosis, is rare but ecologically established and widely dispersed in the environment in Puerto Rico. Plos Neglected Tropical Diseases. 13: e0007727. PMID 31487287 DOI: 10.1371/Journal.Pntd.0007727  0.68
2019 Birdsell DN, Yaglom H, Rodriguez E, Engelthaler DM, Maurer M, Gaither M, Vinocur J, Weiss J, Terriquez J, Komatsu K, Ormsby ME, Gebhardt M, Solomon C, Nienstadt L, Williamson CHD, ... ... Keim PS, et al. Phylogenetic Analysis of Francisella tularensis Group A.II Isolates from 5 Patients with Tularemia, Arizona, USA, 2015-2017. Emerging Infectious Diseases. 25: 944-946. PMID 31002053 DOI: 10.3201/Eid2505.180363  0.68
2019 Vogler AJ, Sahl JW, Leal NC, Sobreira M, Williamson CHD, Bollig MC, Birdsell DN, Rivera A, Thompson B, Nottingham R, Rezende AM, Keim P, Almeida AMP, Wagner DM. A single introduction of Yersinia pestis to Brazil during the 3rd plague pandemic. Plos One. 14: e0209478. PMID 30625164 DOI: 10.1371/Journal.Pone.0209478  0.68
2018 Boehmer T, Vogler AJ, Thomas A, Sauer S, Hergenroether M, Straubinger RK, Birdsell D, Keim P, Sahl JW, Williamson CHD, Riehm JM. Phenotypic characterization and whole genome analysis of extended-spectrum beta-lactamase-producing bacteria isolated from dogs in Germany. Plos One. 13: e0206252. PMID 30365516 DOI: 10.1371/Journal.Pone.0206252  0.68
2018 Liu CM, Stegger M, Aziz M, Johnson TJ, Waits K, Nordstrom L, Gauld L, Weaver B, Rolland D, Statham S, Horwinski J, Sariya S, Davis GS, Sokurenko E, Keim P, et al. Escherichia coli ST131-22 as a Foodborne Uropathogen. Mbio. 9. PMID 30154256 DOI: 10.1128/Mbio.00470-18  0.56
2018 Beck L, Coates SG, Gee J, Hadfield T, Jackson P, Keim P, Lindler L, Olson V, Ostlund E, Roberto F, Samuel J, Sharma S, Tallent S, Wagner DM. Performance Standards for Biological Threat Agent Assays for Department of Defense Applications. Journal of Aoac International. PMID 30135000 DOI: 10.5740/Jaoacint.Spada_Ss  0.68
2018 Enger KS, Mitchell J, Murali B, Birdsell DN, Keim P, Gurian PL, Wagner DM. Evaluating the long-term persistence of Bacillus spores on common surfaces. Microbial Biotechnology. PMID 29726106 DOI: 10.1111/1751-7915.13267  0.68
2018 Williamson CHD, Wagner DM, Keim P, Sahl JW. Developing Inclusivity and Exclusivity Panels for Testing Diagnostic and Detection Tools Targeting , the Causative Agent of Melioidosis. Journal of Aoac International. PMID 29678218 DOI: 10.5740/jaoacint.18-0014  0.68
2017 Mitchell CL, Andrianaivoarimanana V, Colman RE, Busch J, Hornstra-O'Neill H, Keim PS, Wagner DM, Rajerison M, Birdsell DN. Low cost, low tech SNP genotyping tools for resource-limited areas: Plague in Madagascar as a model. Plos Neglected Tropical Diseases. 11: e0006077. PMID 29227994 DOI: 10.1371/Journal.Pntd.0006077  0.68
2017 Price EP, Sarovich DS, Webb JR, Hall CM, Jaramillo SA, Sahl JW, Kaestli M, Mayo M, Harrington G, Baker AL, Sidak-Loftis LC, Settles EW, Lummis M, Schupp JM, Gillece JD, ... ... Keim P, et al. Phylogeographic, genomic, and meropenem susceptibility analysis of Burkholderia ubonensis. Plos Neglected Tropical Diseases. 11: e0005928. PMID 28910350 DOI: 10.1371/Journal.Pntd.0005928  0.68
2017 Vogler AJ, Andrianaivoarimanana V, Telfer S, Hall CM, Sahl JW, Hepp CM, Centner H, Andersen G, Birdsell DN, Rahalison L, Nottingham R, Keim P, Wagner DM, Rajerison M. Temporal phylogeography of Yersinia pestis in Madagascar: Insights into the long-term maintenance of plague. Plos Neglected Tropical Diseases. 11: e0005887. PMID 28873412 DOI: 10.1371/Journal.Pntd.0005887  0.68
2017 Merkley ED, Sego LH, Lin A, Leiser OP, Kaiser BLD, Adkins JN, Keim PS, Wagner DM, Kreuzer HW. Protein abundances can distinguish between naturally-occurring and laboratory strains of Yersinia pestis, the causative agent of plague. Plos One. 12: e0183478. PMID 28854255 DOI: 10.1371/Journal.Pone.0183478  0.68
2016 Sahl JW, Lemmer D, Travis J, Schupp JM, Gillece JD, Aziz M, Driebe EM, Drees KP, Hicks ND, Williamson CH, Hepp CM, Smith DE, Roe C, Engelthaler DM, Wagner DM, ... Keim P, et al. NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats. Microbial Genomics. 2: e000074. PMID 28348869 DOI: 10.1099/mgen.0.000074  0.68
2016 Dwibedi C, Birdsell D, Lärkeryd A, Myrtennäs K, Öhrman C, Nilsson E, Karlsson E, Hochhalter C, Rivera A, Maltinsky S, Bayer B, Keim P, Scholz HC, Tomaso H, Wittwer M, et al. Long-range dispersal moved Francisella tularensis into Western Europe from the East. Microbial Genomics. 2: e000100. PMID 28348839 DOI: 10.1099/mgen.0.000100  0.68
2016 Nualnoi T, Norris MH, Tuanyok A, Brett PJ, Burtnick MN, Keim PS, Settles EW, Allender CJ, AuCoin DP. Development Of Immunoassays For Burkholderia Pseudomallei Typical And Atypical Lipopolysaccharide Strain Typing. The American Journal of Tropical Medicine and Hygiene. PMID 27994103 DOI: 10.4269/ajtmh.16-0308  0.68
2016 Tuanyok A, Mayo M, Scholz H, Hall CM, Allender CJ, Kaestli M, Ginther J, Spring-Pearson S, Bollig MC, Stone JK, Settles EW, Busch JD, Sidak-Loftis L, Sahl JW, Thomas A, ... ... Keim P, et al. Burkholderia humptydooensis sp. nov., a new species related to Burkholderia thailandensis and the fifth member of the pseudomallei complex. Applied and Environmental Microbiology. PMID 27986727 DOI: 10.1128/Aem.02802-16  0.68
2016 Stone NE, Sidak-Loftis LC, Sahl JW, Vazquez AJ, Wiggins KB, Gillece JD, Hicks ND, Schupp JM, Busch JD, Keim P, Wagner DM. More than 50% of Clostridium difficile Isolates from Pet Dogs in Flagstaff, USA, Carry Toxigenic Genotypes. Plos One. 11: e0164504. PMID 27723795 DOI: 10.1371/Journal.Pone.0164504  0.68
2016 Vogler AJ, Nottingham R, Busch JD, Sahl JW, Shuey MM, Foster JT, Schupp JM, Smith SR, Rocke TE, Keim P, Wagner DM. VNTR diversity in Yersinia pestis isolates from an animal challenge study reveals the potential for in vitro mutations during laboratory cultivation. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. PMID 27664903 DOI: 10.1016/J.Meegid.2016.09.019  0.68
2016 Shabbir M, Aleem M, Javed S, Wagner DM, Keim PS, Eqani SA, Bokhari H. Spatial analysis and identification of high risk plague regions in Pakistan based on associated rodent species distribution. Journal of Infection in Developing Countries. 10: 687-693. PMID 27482799  0.68
2016 Johnson SL, Bishop-Lilly KA, Ladner JT, Daligault HE, Davenport KW, Jaissle J, Frey KG, Koroleva GI, Bruce DC, Coyne SR, Broomall SM, Ketheesan N, Mayo M, Hoffmaster A, Elrod MG, ... ... Keim P, et al. Correction for Johnson et al., Complete Genome Sequences for 59 Burkholderia Isolates, Both Pathogenic and Near Neighbor. Genome Announcements. 4. PMID 27103731 DOI: 10.1128/Genomea.00313-16  0.68
2016 Bos KI, Herbig A, Sahl J, Waglechner N, Fourment M, Forrest SA, Klunk J, Schuenemann VJ, Poinar D, Kuch M, Golding GB, Dutour O, Keim P, Wagner DM, Holmes EC, et al. Author response: Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus Elife. DOI: 10.7554/Elife.12994.011  0.68
2015 Califf KJ, Keim PS, Wagner DM, Sahl JW. Redefining the differences in gene content between Yersinia pestis and Yersinia pseudotuberculosis using large-scale comparative genomics. Microbial Genomics. 1: e000028. PMID 28348813 DOI: 10.1099/mgen.0.000028  0.68
2015 Vogler AJ, Nottingham R, Parise KL, Keim P, Barker BM. Effective Disinfectants for Coccidioides immitis and C. posadasii. Applied Biosafety : Journal of the American Biological Safety Association. 20: 154-158. PMID 26900366 DOI: 10.1177/153567601502000306  0.68
2015 Riehm JM, Projahn M, Vogler AJ, Rajerison M, Andersen G, Hall CM, Zimmermann T, Soanandrasana R, Andrianaivoarimanana V, Straubinger RK, Nottingham R, Keim P, Wagner DM, Scholz HC. Diverse Genotypes of Yersinia pestis Caused Plague in Madagascar in 2007. Plos Neglected Tropical Diseases. 9: e0003844. PMID 26069964 DOI: 10.1371/Journal.Pntd.0003844  0.68
2013 Birdsell DN, Antwerpen M, Keim P, Hanczaruk M, Foster JT, Sahl JW, Wagner DM, Grass G. Draft Genome Sequences of Two Bulgarian Bacillus anthracis Strains. Genome Announcements. 1: e0015213. PMID 23599294 DOI: 10.1128/Genomea.00152-13  0.68
2007 Budowle B, Beaudry JA, Barnaby NG, Giusti AM, Bannan JD, Keim P. Role of law enforcement response and microbial forensics in investigation of bioterrorism. Croatian Medical Journal. 48: 437-49. PMID 17696298  0.36
2005 Lowell JL, Wagner DM, Atshabar B, Antolin MF, Vogler AJ, Keim P, Chu MC, Gage KL. Erratum: Identifying sources of human exposure to plague (Journal of Clinical Microbiology (2005) 43:2 (650-656)) Journal of Clinical Microbiology. 43. DOI: 10.1128/Jcm.43.4.2040.2005  0.68
1999 Okinaka R, Cloud K, Hampton O, Hoffmaster A, Hill K, Keim P, Koehler T, Lamke G, Kumano S, Manter D, Martinez Y, Ricke D, Svensson R, Jackson P. Sequence, assembly and analysis of pX01 and pX02. Journal of Applied Microbiology. 87: 261-2. PMID 10475962 DOI: 10.1046/J.1365-2672.1999.00883.X  0.4
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