Zhengdong Zhang, Ph.D. - Publications

Affiliations: 
2002 University of Houston, Houston, TX, United States 
Area:
Molecular Biology, Microbiology Biology

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Dong X, Shi M, Lee M, Toro R, Gravina S, Han W, Yasuda S, Wang T, Zhang Z, Vijg J, Suh Y, Spivack SD. Global, integrated analysis of methylomes and transcriptomes from laser capture microdissected bronchial and alveolar cells in human lung. Epigenetics. 1-22. PMID 29465290 DOI: 10.1080/15592294.2018.1441650  0.3
2015 Nadel J, Athanasiadou R, Lemetre C, Wijetunga NA, Ó Broin P, Sato H, Zhang Z, Jeddeloh J, Montagna C, Golden A, Seoighe C, Greally JM. RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships. Epigenetics & Chromatin. 8: 46. PMID 26579211 DOI: 10.1186/S13072-015-0040-6  0.32
2015 Chung JH, Cai J, Suskin BG, Zhang Z, Coleman K, Morrow BE. Whole-Genome Sequencing and Integrative Genomic Analysis Approach on Two 22q11.2 Deletion Syndrome Family Trios for Genotype to Phenotype Correlations. Human Mutation. 36: 797-807. PMID 25981510 DOI: 10.1002/Humu.22814  0.328
2012 Golden A, McLellan AS, Dubin RA, Jing Q, O Broin P, Moskowitz D, Zhang Z, Suzuki M, Hargitai J, Calder RB, Greally JM. The Einstein Genome Gateway using WASP - a high throughput multi-layered life sciences portal for XSEDE. Studies in Health Technology and Informatics. 175: 182-91. PMID 22942009 DOI: 10.3233/978-1-61499-054-3-182  0.321
2009 Korbel JO, Abyzov A, Mu XJ, Carriero N, Cayting P, Zhang Z, Snyder M, Gerstein MB. PEMer: a computational framework with simulation-based error models for inferring genomic structural variants from massive paired-end sequencing data. Genome Biology. 10: R23. PMID 19236709 DOI: 10.1186/Gb-2009-10-2-R23  0.327
2009 Zhang ZD, Nayar M, Ammons D, Rampersad J, Fox GE. Rapid in vivo exploration of a 5S rRNA neutral network. Journal of Microbiological Methods. 76: 181-7. PMID 19041908 DOI: 10.1016/J.Mimet.2008.10.010  0.484
2008 Wu JQ, Du J, Rozowsky J, Zhang Z, Urban AE, Euskirchen G, Weissman S, Gerstein M, Snyder M. Systematic analysis of transcribed loci in ENCODE regions using RACE sequencing reveals extensive transcription in the human genome. Genome Biology. 9: R3. PMID 18173853 DOI: 10.1186/Gb-2008-9-1-R3  0.352
2006 Muzny DM, Scherer SE, Kaul R, Wang J, Yu J, Sudbrak R, Buhay CJ, Chen R, Cree A, Ding Y, Dugan-Rocha S, Gill R, Gunaratne P, Harris RA, Hawes AC, ... ... Zhang Z, et al. The DNA sequence, annotation and analysis of human chromosome 3. Nature. 440: 1194-8. PMID 16641997 DOI: 10.1038/Nature04728  0.326
2006 Zhang Z, Jackson GW, Fox GE, Willson RC. Microbial identification by mass cataloging. Bmc Bioinformatics. 7: 117. PMID 16524471 DOI: 10.1186/1471-2105-7-117  0.503
2004 Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC, Burch PE, Okwuonu G, Hines S, Lewis L, DeRamo C, Delgado O, ... ... Zhang Z, et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature. 428: 493-521. PMID 15057822 DOI: 10.1038/Nature02426  0.338
2003 Zhang Z, D'Souza LM, Lee YH, Fox GE. Common 5S rRNA variants are likely to be accepted in many sequence contexts. Journal of Molecular Evolution. 56: 69-76. PMID 12569424 DOI: 10.1007/S00239-002-2381-6  0.547
2002 Zhang Z, Willson RC, Fox GE. Identification of characteristic oligonucleotides in the bacterial 16S ribosomal RNA sequence dataset. Bioinformatics (Oxford, England). 18: 244-50. PMID 11847072 DOI: 10.1093/Bioinformatics/18.2.244  0.542
2002 Nagaswamy U, Larios-Sanz M, Hury J, Collins S, Zhang Z, Zhao Q, Fox GE. NCIR: a database of non-canonical interactions in known RNA structures. Nucleic Acids Research. 30: 395-7. PMID 11752347 DOI: 10.1093/Nar/30.1.395  0.519
2000 Nagaswamy U, Voss N, Zhang Z, Fox GE. Database of non-canonical base pairs found in known RNA structures. Nucleic Acids Research. 28: 375-6. PMID 10592279 DOI: 10.1093/Nar/28.1.375  0.499
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