Derek A. T. Cummings - Publications

Affiliations: 
Johns Hopkins University, Baltimore, MD 
Area:
Epidemiology

123 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Yang B, García-Carreras B, Lessler J, Read JM, Zhu H, Metcalf CJE, Hay JA, Kwok KO, Shen R, Jiang CQ, Guan Y, Riley S, Cummings DA. Long term intrinsic cycling in human life course antibody responses to influenza A(H3N2): an observational and modelling study. Elife. 11. PMID 36458815 DOI: 10.7554/eLife.81457  0.543
2020 Clapham H, Hay J, Routledge I, Takahashi S, Choisy M, Cummings D, Grenfell B, Metcalf CJE, Mina M, Barraquer IR, Salje H, Tam CC. Seroepidemiologic Study Designs for Determining SARS-COV-2 Transmission and Immunity. Emerging Infectious Diseases. 26. PMID 32544053 DOI: 10.3201/Eid2609.201840  0.378
2019 Rodriguez-Barraquer I, Salje H, Cummings DA. Opportunities for improved surveillance and control of dengue from age-specific case data. Elife. 8. PMID 31120419 DOI: 10.7554/Elife.45474  0.643
2019 Rodríguez-Barraquer I, Salje H, Cummings DA. Dengue pre-vaccination screening and positive predictive values. The Lancet. Infectious Diseases. 19: 132-134. PMID 30712834 DOI: 10.1016/S1473-3099(18)30799-0  0.565
2019 Rattigan SM, Gorse G, Kirpich A, Cummings D, Rodriguez-Barradas MC, Simberkoff M, Bessesen MT, Gibert CL, Nyquist A, Price CS, Reich N, Brown A, Radonovich L, Perl TM, Perl TM. 410. Influence of Pre-season Antibody Titers to Influenza on Influenza Risk in a Cohort of Healthcare Personnel Open Forum Infectious Diseases. 6: S208-S208. DOI: 10.1093/Ofid/Ofz360.483  0.457
2019 Bessesen MT, Radonovich L, Rattigan SM, Cummings D, Rodriguez-Barradas MC, Simberkoff M, Gibert CL, Nyquist A, Price CS, Gorse G, Gaydos CA, Perl TM, Perl TM. 1205. Healthcare Personnel Knowledge, Attitudes, and Beliefs Towards Infection Prevention and Control Measures for Protection from Respiratory Infections Open Forum Infectious Diseases. 6: S433-S433. DOI: 10.1093/Ofid/Ofz360.1068  0.343
2019 Nyquist A, Rattigan SM, Gibert CL, Gorse G, Perl TM, Perl TM, Price CS, Radonovich L, Rodriguez-Barradas MC, Simberkoff M, Bessesen MT, Gaydos CA, Cummings D. 1204. Increased Risk of Respiratory Infections Among Healthcare Personnel (HCP) Caring for Children Open Forum Infectious Diseases. 6: S432-S433. DOI: 10.1093/Ofid/Ofz360.1067  0.395
2019 Read J, Cummings D. Severity of human infections of avian influenza A(H7N9) in China between 2014 and 2018 International Journal of Infectious Diseases. 79: 100. DOI: 10.1016/J.Ijid.2018.11.250  0.4
2019 Read J, Cummings D. The potential for international dissemination of emerging viral pathogens International Journal of Infectious Diseases. 79: 23. DOI: 10.1016/J.Ijid.2018.11.070  0.32
2017 Grantz KH, Rane MS, Salje H, Glass GE, Schachterle SE, Cummings DA. Reply to Shanks and Brundage: Many plausible mechanisms of pandemic mortality disparities. Proceedings of the National Academy of Sciences of the United States of America. PMID 28386047 DOI: 10.1073/Pnas.1703851114  0.358
2017 Salje H, Lessler J, Maljkovic Berry I, Melendrez MC, Endy T, Kalayanarooj S, A-Nuegoonpipat A, Chanama S, Sangkijporn S, Klungthong C, Thaisomboonsuk B, Nisalak A, Gibbons RV, Iamsirithaworn S, Macareo LR, ... ... Cummings DA, et al. Dengue diversity across spatial and temporal scales: Local structure and the effect of host population size. Science (New York, N.Y.). 355: 1302-1306. PMID 28336667 DOI: 10.1126/Science.Aaj9384  0.568
2017 Quandelacy T, Zimmer S, Vukotich C, Bieltz R, Grantz K, Galloway D, Lessler J, Zheteyeva Y, Uzicanin A, Gao H, Cummings D. Predicting virologically confirmed influenza using school absences in PA Online Journal of Public Health Informatics. 9. DOI: 10.5210/Ojphi.V9I1.7701  0.567
2017 Barlow S, Temte J, Zheteyeva Y, Fowlkes A, Reed C, Cummings D. Utility of Nontraditional Data Sources for Early Detection of Influenza Online Journal of Public Health Informatics. 9. DOI: 10.5210/Ojphi.V9I1.7636  0.387
2017 Simberkoff MS, Frederick J, Brown A, Cummings D, Gaydos C, Gibert C, Gorse G, Nyquist A, Perl T, Price C, Radonovich LJ, Reich N, Rodriguez-Barradas M, Bessesen M. The Influence of Mandatory Vs. Non-Mandatory Influenza Vaccination Policies on Workplace Absenteeism During Respiratory Virus Season Open Forum Infectious Diseases. 4. DOI: 10.1093/Ofid/Ofx163.1157  0.398
2016 Reich NG, Lessler J, Sakrejda K, Lauer SA, Iamsirithaworn S, Cummings DA. Case study in evaluating time series prediction models using the relative mean absolute error. The American Statistician. 70: 285-292. PMID 28138198 DOI: 10.1080/00031305.2016.1148631  0.517
2016 Hoang Quoc C, Henrik S, Isabel RB, In-Kyu Y, Chau NV, Hung NT, Tuan HM, Lan PT, Willis B, Nisalak A, Kalayanarooj S, Cummings DA, Simmons CP. Synchrony of Dengue Incidence in Ho Chi Minh City and Bangkok. Plos Neglected Tropical Diseases. 10: e0005188. PMID 28033384 DOI: 10.1371/Journal.Pntd.0005188  0.32
2016 Flasche S, Jit M, Rodríguez-Barraquer I, Coudeville L, Recker M, Koelle K, Milne G, Hladish TJ, Perkins TA, Cummings DA, Dorigatti I, Laydon DJ, España G, Kelso J, Longini I, et al. The Long-Term Safety, Public Health Impact, and Cost-Effectiveness of Routine Vaccination with a Recombinant, Live-Attenuated Dengue Vaccine (Dengvaxia): A Model Comparison Study. Plos Medicine. 13: e1002181. PMID 27898668 DOI: 10.1371/Journal.Pmed.1002181  0.646
2016 Grantz KH, Rane MS, Salje H, Glass GE, Schachterle SE, Cummings DA. Disparities in influenza mortality and transmission related to sociodemographic factors within Chicago in the pandemic of 1918. Proceedings of the National Academy of Sciences of the United States of America. PMID 27872284 DOI: 10.1073/Pnas.1612838113  0.384
2016 Lessler J, Ott CT, Carcelen AC, Konikoff JM, Williamson J, Bi Q, Kucirka LM, Cummings DA, Reich NG, Chaisson LH. Times to key events in Zika virus infection and implications for blood donation: a systematic review. Bulletin of the World Health Organization. 94: 841-849. PMID 27821887 DOI: 10.2471/Blt.16.174540  0.596
2016 Salje H, Lessler J, Paul KK, Azman AS, Rahman MW, Rahman M, Cummings D, Gurley ES, Cauchemez S. How social structures, space, and behaviors shape the spread of infectious diseases using chikungunya as a case study. Proceedings of the National Academy of Sciences of the United States of America. PMID 27821727 DOI: 10.1073/Pnas.1611391113  0.602
2016 Salje H, Cummings DA, Lessler J. Estimating infectious disease transmission distances using the overall distribution of cases. Epidemics. 17: 10-18. PMID 27744095 DOI: 10.1016/J.Epidem.2016.10.001  0.572
2016 Ferguson NM, Rodríguez-Barraquer I, Dorigatti I, Mier-Y-Teran-Romero L, Laydon DJ, Cummings DA. Benefits and risks of the Sanofi-Pasteur dengue vaccine: Modeling optimal deployment. Science (New York, N.Y.). 353: 1033-1036. PMID 27701113 DOI: 10.1126/Science.Aaf9590  0.657
2016 Blackwood JC, Cummings DA, Iamsirithaworn S, Rohani P. Using age-stratified incidence data to examine the transmission consequences of pertussis vaccination. Epidemics. 16: 1-7. PMID 27663785 DOI: 10.1016/J.Epidem.2016.02.001  0.411
2016 Cauchemez S, Nouvellet P, Cori A, Jombart T, Garske T, Clapham H, Moore S, Mills HL, Salje H, Collins C, Rodriquez-Barraquer I, Riley S, Truelove S, Algarni H, Alhakeem R, ... ... Cummings DA, et al. Unraveling the drivers of MERS-CoV transmission. Proceedings of the National Academy of Sciences of the United States of America. PMID 27457935 DOI: 10.1073/Pnas.1519235113  0.591
2016 Lessler J, Chaisson LH, Kucirka LM, Bi Q, Grantz K, Salje H, Carcelen AC, Ott CT, Sheffield JS, Ferguson NM, Cummings DA, Metcalf CJ, Rodriguez-Barraquer I. Assessing the global threat from Zika virus. Science (New York, N.Y.). PMID 27417495 DOI: 10.1126/Science.Aaf8160  0.731
2016 Truelove S, Zhu H, Lessler J, Riley S, Read JM, Wang S, Kwok KO, Guan Y, Jiang CQ, Cummings DA. A comparison of hemagglutination inhibition and neutralization assays for characterizing immunity to seasonal influenza A. Influenza and Other Respiratory Viruses. PMID 27406695 DOI: 10.1111/Irv.12408  0.591
2016 Reich NG, Lauer SA, Sakrejda K, Iamsirithaworn S, Hinjoy S, Suangtho P, Suthachana S, Clapham HE, Salje H, Cummings DA, Lessler J. Challenges in Real-Time Prediction of Infectious Disease: A Case Study of Dengue in Thailand. Plos Neglected Tropical Diseases. 10: e0004761. PMID 27304062 DOI: 10.1371/Journal.Pntd.0004761  0.577
2016 Lessler J, Salje H, Grabowski MK, Cummings DA. Measuring Spatial Dependence for Infectious Disease Epidemiology. Plos One. 11: e0155249. PMID 27196422 DOI: 10.1371/Journal.Pone.0155249  0.553
2016 Rodriguez-Barraquer I, Salje H, Cummings DA. Dengue Vaccine in Regions of Endemic Disease. The New England Journal of Medicine. 374: 1388. PMID 27050220 DOI: 10.1056/NEJMc1514451#SA1  0.587
2016 Nisalak A, Clapham HE, Kalayanarooj S, Klungthong C, Thaisomboonsuk B, Fernandez S, Reiser J, Srikiatkhachorn A, Macareo LR, Lessler JT, Cummings DA, Yoon IK. Forty Years of Dengue Surveillance at a Tertiary Pediatric Hospital in Bangkok, Thailand, 1973-2012. The American Journal of Tropical Medicine and Hygiene. PMID 27022151 DOI: 10.4269/Ajtmh.15-0337  0.617
2016 Lessler J, Cummings DA. Mechanistic Models of Infectious Disease and Their Impact on Public Health. American Journal of Epidemiology. 183: 415-22. PMID 26893297 DOI: 10.1093/Aje/Kww021  0.542
2016 Jiang CQ, Lessler J, Kim L, Kwok KO, Read JM, Wang S, Tan L, Hast M, Zhu H, Guan Y, Riley S, Cummings DA. Cohort Profile: A study of influenza immunity in the urban and rural Guangzhou region of China: the Fluscape Study. International Journal of Epidemiology. PMID 26875566 DOI: 10.1093/Ije/Dyv353  0.507
2016 Lessler J, Salje H, Van Kerkhove MD, Ferguson NM, Cauchemez S, Rodriquez-Barraquer I, Hakeem R, Jombart T, Aguas R, Al-Barrak A, Cummings DA. Estimating the Severity and Subclinical Burden of Middle East Respiratory Syndrome Coronavirus Infection in the Kingdom of Saudi Arabia. American Journal of Epidemiology. PMID 26851269 DOI: 10.1093/Aje/Kwv452  0.597
2016 Chadsuthi S, Iamsirithaworn S, Triampo W, Cummings DA. The impact of rainfall and temperature on the spatial progression of cases during the chikungunya re-emergence in Thailand in 2008-2009. Transactions of the Royal Society of Tropical Medicine and Hygiene. 110: 125-33. PMID 26822605 DOI: 10.1093/Trstmh/Trv114  0.33
2016 Krosche A, Bessesen M, Cummings D, Gaydos C, Gibert C, Gorse G, Los J, Nyquist A, Price C, Radonovich L, Reich N, Rodriguez-Barradas MC, Simberkoff MS, Perl TM, Team TRS. Acute Respiratory Infections (ARIs) Among Outpatient Healthcare Personnel (HCP) Open Forum Infectious Diseases. 3. DOI: 10.1093/Ofid/Ofw194.136  0.324
2016 Krosche A, Bessesen M, Cummings D, Gaydos C, Gibert C, Gorse G, Los J, Nyquist A, Price C, Radonovich L, Reich N, Rodriguez-Barradas MC, Simberkoff MS, Perl TM. Correlation of Corrective Eyewear to Acute Respiratory Infection (ARI) Among Outpatient Healthcare Personnel (HCP) Open Forum Infectious Diseases. 3. DOI: 10.1093/Ofid/Ofw172.992  0.318
2016 Zimmer S, Read J, Vukotich C, Schweizer ML, Galloway D, Noble E, Rainey J, Gao H, Uzicanin A, Cummings D. Influenza and Other Respiratory Viral Infections Among School Children in Pittsburgh, Pennsylvania Open Forum Infectious Diseases. 3. DOI: 10.1093/Ofid/Ofw172.509  0.365
2015 Althouse BM, Scarpino SV, Meyers LA, Ayers JW, Bargsten M, Baumbach J, Brownstein JS, Castro L, Clapham H, Cummings DA, Del Valle S, Eubank S, Fairchild G, Finelli L, Generous N, et al. Enhancing disease surveillance with novel data streams: challenges and opportunities. Epj Data Science. 4. PMID 27990325 DOI: 10.1140/Epjds/S13688-015-0054-0  0.713
2015 Clapham HE, Rodriguez-Barraquer I, Azman AS, Althouse BM, Salje H, Gibbons RV, Rothman A, Jarman RG, Nisalak A, Thaisomboonsuk B, Kalayanarooj S, Nimmannitya S, Vaughn DW, Green S, Yoon IK, ... Cummings DA, et al. Dengue neutralizing antibody kinetics in children after symptomatic primary and post-primary dengue virus infections. The Journal of Infectious Diseases. PMID 26704615 DOI: 10.1093/Infdis/Jiv759  0.749
2015 Clapham H, Cummings DA, Nisalak A, Kalayanarooj S, Thaisomboonsuk B, Klungthong C, Fernandez S, Srikiatkhachorn A, Macareo LR, Lessler J, Reiser J, Yoon IK. Epidemiology of Infant Dengue Cases Illuminates Serotype-Specificity in the Interaction between Immunity and Disease, and Changes in Transmission Dynamics. Plos Neglected Tropical Diseases. 9: e0004262. PMID 26658730 DOI: 10.1371/Journal.Pntd.0004262  0.573
2015 Mazet JA, Wei Q, Zhao G, Cummings DA, Desmond JS, Rosenthal J, King CH, Cao W, Chmura AA, Hagan EA, Zhang S, Xiao X, Xu J, Shi Z, Feng F, et al. Joint China-US Call for Employing a Transdisciplinary Approach to Emerging Infectious Diseases. Ecohealth. PMID 26646835 DOI: 10.1007/S10393-015-1060-1  0.412
2015 Kraemer MU, Perkins TA, Cummings DA, Zakar R, Hay SI, Smith DL, Reiner RC. Big city, small world: density, contact rates, and transmission of dengue across Pakistan. Journal of the Royal Society, Interface / the Royal Society. 12. PMID 26468065 DOI: 10.1098/Rsif.2015.0468  0.401
2015 van Panhuis WG, Choisy M, Xiong X, Chok NS, Akarasewi P, Iamsirithaworn S, Lam SK, Chong CK, Lam FC, Phommasak B, Vongphrachanh P, Bouaphanh K, Rekol H, Hien NT, Thai PQ, ... ... Cummings DA, et al. Region-wide synchrony and traveling waves of dengue across eight countries in Southeast Asia. Proceedings of the National Academy of Sciences of the United States of America. PMID 26438851 DOI: 10.1073/Pnas.1501375112  0.402
2015 Salje H, Cauchemez S, Alera MT, Rodriguez-Barraquer I, Thaisomboonsuk B, Srikiatkhachorn A, Lago CB, Villa D, Klungthong C, Tac-An IA, Fernandez S, Velasco JM, Roque VG, Nisalak A, Macareo LR, ... ... Cummings D, et al. Reconstruction of 60 Years of Chikungunya Epidemiology in the Philippines Demonstrates Episodic and Focal Transmission. The Journal of Infectious Diseases. PMID 26410592 DOI: 10.1093/Infdis/Jiv470  0.662
2015 Rodríguez-Barraquer I, Solomon SS, Kuganantham P, Srikrishnan AK, Vasudevan CK, Iqbal SH, Balakrishnan P, Solomon S, Mehta SH, Cummings DA. The Hidden Burden of Dengue and Chikungunya in Chennai, India. Plos Neglected Tropical Diseases. 9: e0003906. PMID 26181441 DOI: 10.1371/Journal.Pntd.0003906  0.696
2015 Rodriguez-Barraquer I, Mier-y-Teran-Romero L, Ferguson N, Burke DS, Cummings DA. Differential efficacy of dengue vaccine by immune status. Lancet (London, England). 385: 1726. PMID 25943936 DOI: 10.1016/S0140-6736(15)60889-3  0.618
2015 Kucharski AJ, Lessler J, Read JM, Zhu H, Jiang CQ, Guan Y, Cummings DA, Riley S. Estimating the life course of influenza A(H3N2) antibody responses from cross-sectional data. Plos Biology. 13: e1002082. PMID 25734701 DOI: 10.1371/Journal.Pbio.1002082  0.641
2015 Reich NG, Cummings DA, Lauer SA, Zorn M, Robinson C, Nyquist AC, Price CS, Simberkoff M, Radonovich LJ, Perl TM. Triggering interventions for influenza: the ALERT algorithm. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 60: 499-504. PMID 25414260 DOI: 10.1093/Cid/Ciu749  0.359
2015 Althouse BM, Hanley KA, Diallo M, Sall AA, Ba Y, Faye O, Diallo D, Watts DM, Weaver SC, Cummings DA. Impact of climate and mosquito vector abundance on sylvatic arbovirus circulation dynamics in Senegal. The American Journal of Tropical Medicine and Hygiene. 92: 88-97. PMID 25404071 DOI: 10.4269/Ajtmh.13-0617  0.638
2015 Frederick J, Dansky M, Brown AC, Bessesen M, Cummings D, Gibert C, Gorse G, Nyquist A, Perl TM, Price C, Radonovich L, Reich NG, Rodriguez-Barradas M, Simberkoff MS, Study R. The Impact of Mandatory Versus Non-Mandatory Vaccination Programs on Employee Sick Days During Three Consecutive Acute Respiratory Illness Seasons: Observations From the ResPECT Study Open Forum Infectious Diseases. 2. DOI: 10.1093/Ofid/Ofv133.1419  0.333
2014 Lessler J, Rodriguez-Barraquer I, Cummings DA, Garske T, Van Kerkhove M, Mills H, Truelove S, Hakeem R, Albarrak A, Ferguson NM. Estimating Potential Incidence of MERS-CoV Associated with Hajj Pilgrims to Saudi Arabia, 2014. Plos Currents. 6. PMID 25685624 DOI: 10.1371/Currents.Outbreaks.C5C9C9Abd636164A9B6Fd4Dbda974369  0.714
2014 Kwok KO, Cowling BJ, Wei VW, Wu KM, Read JM, Lessler J, Cummings DA, Peiris JS, Riley S. Social contacts and the locations in which they occur as risk factors for influenza infection. Proceedings. Biological Sciences / the Royal Society. 281: 20140709. PMID 25009062 DOI: 10.1098/Rspb.2014.0709  0.545
2014 Kucharski AJ, Kwok KO, Wei VW, Cowling BJ, Read JM, Lessler J, Cummings DA, Riley S. The contribution of social behaviour to the transmission of influenza A in a human population. Plos Pathogens. 10: e1004206. PMID 24968312 DOI: 10.1371/Journal.Ppat.1004206  0.537
2014 Salje H, Rodríguez-Barraquer I, Rainwater-Lovett K, Nisalak A, Thaisomboonsuk B, Thomas SJ, Fernandez S, Jarman RG, Yoon IK, Cummings DA. Variability in dengue titer estimates from plaque reduction neutralization tests poses a challenge to epidemiological studies and vaccine development. Plos Neglected Tropical Diseases. 8: e2952. PMID 24967885 DOI: 10.1371/Journal.Pntd.0002952  0.655
2014 Ferguson NM, Cummings DA. How season and serotype determine dengue transmissibility. Proceedings of the National Academy of Sciences of the United States of America. 111: 9370-1. PMID 24927557 DOI: 10.1073/Pnas.1407648111  0.477
2014 Read JM, Lessler J, Riley S, Wang S, Tan LJ, Kwok KO, Guan Y, Jiang CQ, Cummings DA. Social mixing patterns in rural and urban areas of southern China. Proceedings. Biological Sciences / the Royal Society. 281: 20140268. PMID 24789897 DOI: 10.1098/Rspb.2014.0268  0.564
2014 Rudolph KE, Lessler J, Moloney RM, Kmush B, Cummings DA. Incubation periods of mosquito-borne viral infections: a systematic review. The American Journal of Tropical Medicine and Hygiene. 90: 882-91. PMID 24639305 DOI: 10.4269/Ajtmh.13-0403  0.597
2014 Althouse BM, Durbin AP, Hanley KA, Halstead SB, Weaver SC, Cummings DA. Viral kinetics of primary dengue virus infection in non-human primates: a systematic review and individual pooled analysis. Virology. 452: 237-46. PMID 24606701 DOI: 10.1016/J.Virol.2014.01.015  0.679
2014 Grabowski MK, Lessler J, Redd AD, Kagaayi J, Laeyendecker O, Ndyanabo A, Nelson MI, Cummings DA, Bwanika JB, Mueller AC, Reynolds SJ, Munshaw S, Ray SC, Lutalo T, Manucci J, et al. The role of viral introductions in sustaining community-based HIV epidemics in rural Uganda: evidence from spatial clustering, phylogenetics, and egocentric transmission models. Plos Medicine. 11: e1001610. PMID 24595023 DOI: 10.1371/Journal.Pmed.1001610  0.531
2014 Smith DL, Perkins TA, Reiner RC, Barker CM, Niu T, Chaves LF, Ellis AM, George DB, Le Menach A, Pulliam JR, Bisanzio D, Buckee C, Chiyaka C, Cummings DA, Garcia AJ, et al. Recasting the theory of mosquito-borne pathogen transmission dynamics and control. Transactions of the Royal Society of Tropical Medicine and Hygiene. 108: 185-97. PMID 24591453 DOI: 10.1093/Trstmh/Tru026  0.344
2014 Rodriguez-Barraquer I, Mier-y-Teran-Romero L, Schwartz IB, Burke DS, Cummings DA. Potential opportunities and perils of imperfect dengue vaccines. Vaccine. 32: 514-20. PMID 24269318 DOI: 10.1016/J.Vaccine.2013.11.020  0.635
2014 Rodríguez-Barraquer I, Buathong R, Iamsirithaworn S, Nisalak A, Lessler J, Jarman RG, Gibbons RV, Cummings DA. Revisiting Rayong: shifting seroprofiles of dengue in Thailand and their implications for transmission and control. American Journal of Epidemiology. 179: 353-60. PMID 24197388 DOI: 10.1093/Aje/Kwt256  0.583
2014 Anderson KB, Gibbons RV, Cummings DA, Nisalak A, Green S, Libraty DH, Jarman RG, Srikiatkhachorn A, Mammen MP, Darunee B, Yoon IK, Endy TP. A shorter time interval between first and second dengue infections is associated with protection from clinical illness in a school-based cohort in Thailand. The Journal of Infectious Diseases. 209: 360-8. PMID 23964110 DOI: 10.1093/Infdis/Jit436  0.404
2014 Reich NG, Cummings D, Nyquist A, Perl TM, Radonovich LJ. The ALERT Algorithm: How to Simply Define a Period of Elevated Disease Incidence Online Journal of Public Health Informatics. 6. DOI: 10.5210/Ojphi.V6I1.5177  0.351
2013 van Panhuis WG, Grefenstette J, Jung SY, Chok NS, Cross A, Eng H, Lee BY, Zadorozhny V, Brown S, Cummings D, Burke DS. Contagious diseases in the United States from 1888 to the present. The New England Journal of Medicine. 369: 2152-8. PMID 24283231 DOI: 10.1056/Nejmms1215400  0.307
2013 Azman AS, Stark JH, Althouse BM, Vukotich CJ, Stebbins S, Burke DS, Cummings DA. Household transmission of influenza A and B in a school-based study of non-pharmaceutical interventions. Epidemics. 5: 181-6. PMID 24267874 DOI: 10.1016/J.Epidem.2013.09.001  0.66
2013 Word DP, Young JK, Cummings DA, Iamsirithaworn S, Laird CD. Interior-point methods for estimating seasonal parameters in discrete-time infectious disease models. Plos One. 8: e74208. PMID 24167542 DOI: 10.1371/Journal.Pone.0074208  0.339
2013 Lee RM, Lessler J, Lee RA, Rudolph KE, Reich NG, Perl TM, Cummings DA. Incubation periods of viral gastroenteritis: a systematic review. Bmc Infectious Diseases. 13: 446. PMID 24066865 DOI: 10.1186/1471-2334-13-446  0.555
2013 Rodriguez-Barraquer I, Mier-y-Teran-Romero L, Burke DS, Cummings DA. Challenges in the interpretation of dengue vaccine trial results. Plos Neglected Tropical Diseases. 7: e2126. PMID 24009782 DOI: 10.1371/Journal.Pntd.0002126  0.652
2013 Reich NG, Shrestha S, King AA, Rohani P, Lessler J, Kalayanarooj S, Yoon IK, Gibbons RV, Burke DS, Cummings DA. Interactions between serotypes of dengue highlight epidemiological impact of cross-immunity. Journal of the Royal Society, Interface / the Royal Society. 10: 20130414. PMID 23825116 DOI: 10.1098/Rsif.2013.0414  0.635
2013 Assiri A, McGeer A, Perl TM, Price CS, Al Rabeeah AA, Cummings DA, Alabdullatif ZN, Assad M, Almulhim A, Makhdoom H, Madani H, Alhakeem R, Al-Tawfiq JA, Cotten M, Watson SJ, et al. Hospital outbreak of Middle East respiratory syndrome coronavirus. The New England Journal of Medicine. 369: 407-16. PMID 23782161 DOI: 10.1056/Nejmoa1306742  0.373
2013 Blackwood JC, Cummings DA, Broutin H, Iamsirithaworn S, Rohani P. Deciphering the impacts of vaccination and immunity on pertussis epidemiology in Thailand. Proceedings of the National Academy of Sciences of the United States of America. 110: 9595-600. PMID 23690587 DOI: 10.1073/Pnas.1220908110  0.441
2013 Mier-y-Teran-Romero L, Schwartz IB, Cummings DA. Breaking the symmetry: immune enhancement increases persistence of dengue viruses in the presence of asymmetric transmission rates. Journal of Theoretical Biology. 332: 203-10. PMID 23665358 DOI: 10.1016/J.Jtbi.2013.04.036  0.413
2013 Reiner RC, Perkins TA, Barker CM, Niu T, Chaves LF, Ellis AM, George DB, Le Menach A, Pulliam JR, Bisanzio D, Buckee C, Chiyaka C, Cummings DA, Garcia AJ, Gatton ML, et al. A systematic review of mathematical models of mosquito-borne pathogen transmission: 1970-2010. Journal of the Royal Society, Interface / the Royal Society. 10: 20120921. PMID 23407571 DOI: 10.1098/Rsif.2012.0921  0.339
2013 Azman AS, Rudolph KE, Cummings DA, Lessler J. The incubation period of cholera: a systematic review. The Journal of Infection. 66: 432-8. PMID 23201968 DOI: 10.1016/J.Jinf.2012.11.013  0.578
2012 Althouse BM, Lessler J, Sall AA, Diallo M, Hanley KA, Watts DM, Weaver SC, Cummings DA. Synchrony of sylvatic dengue isolations: a multi-host, multi-vector SIR model of dengue virus transmission in Senegal. Plos Neglected Tropical Diseases. 6: e1928. PMID 23209867 DOI: 10.1371/Journal.Pntd.0001928  0.718
2012 Rainwater-Lovett K, Rodriguez-Barraquer I, Cummings DA, Lessler J. Variation in dengue virus plaque reduction neutralization testing: systematic review and pooled analysis. Bmc Infectious Diseases. 12: 233. PMID 23020074 DOI: 10.1186/1471-2334-12-233  0.719
2012 Stark JH, Cummings DA, Ermentrout B, Ostroff S, Sharma R, Stebbins S, Burke DS, Wisniewski SR. Local variations in spatial synchrony of influenza epidemics. Plos One. 7: e43528. PMID 22916274 DOI: 10.1371/Journal.Pone.0043528  0.38
2012 Lessler J, Riley S, Read JM, Wang S, Zhu H, Smith GJ, Guan Y, Jiang CQ, Cummings DA. Evidence for antigenic seniority in influenza A (H3N2) antibody responses in southern China. Plos Pathogens. 8: e1002802. PMID 22829765 DOI: 10.1371/Journal.Ppat.1002802  0.582
2012 Blackwood JC, Cummings DA, Broutin H, Iamsirithaworn S, Rohani P. The population ecology of infectious diseases: pertussis in Thailand as a case study. Parasitology. 139: 1888-98. PMID 22717183 DOI: 10.1017/S0031182012000431  0.34
2012 Read JM, Edmunds WJ, Riley S, Lessler J, Cummings DA. Close encounters of the infectious kind: methods to measure social mixing behaviour. Epidemiology and Infection. 140: 2117-30. PMID 22687447 DOI: 10.1017/S0950268812000842  0.543
2012 Burton J, Billings L, Cummings DA, Schwartz IB. Disease persistence in epidemiological models: the interplay between vaccination and migration. Mathematical Biosciences. 239: 91-6. PMID 22652034 DOI: 10.1016/J.Mbs.2012.05.003  0.371
2012 Salje H, Lessler J, Endy TP, Curriero FC, Gibbons RV, Nisalak A, Nimmannitya S, Kalayanarooj S, Jarman RG, Thomas SJ, Burke DS, Cummings DA. Revealing the microscale spatial signature of dengue transmission and immunity in an urban population. Proceedings of the National Academy of Sciences of the United States of America. 109: 9535-8. PMID 22645364 DOI: 10.1073/Pnas.1120621109  0.572
2012 Stark JH, Sharma R, Ostroff S, Cummings DA, Ermentrout B, Stebbins S, Burke DS, Wisniewski SR. Local spatial and temporal processes of influenza in Pennsylvania, USA: 2003-2009. Plos One. 7: e34245. PMID 22470544 DOI: 10.1371/Journal.Pone.0034245  0.401
2012 Word DP, Cummings DA, Burke DS, Iamsirithaworn S, Laird CD. A nonlinear programming approach for estimation of transmission parameters in childhood infectious disease using a continuous time model. Journal of the Royal Society, Interface / the Royal Society. 9: 1983-97. PMID 22337634 DOI: 10.1098/Rsif.2011.0829  0.323
2012 Reich NG, Lessler J, Cummings DA, Brookmeyer R. Estimating absolute and relative case fatality ratios from infectious disease surveillance data. Biometrics. 68: 598-606. PMID 22276951 DOI: 10.1111/J.1541-0420.2011.01709.X  0.622
2011 Lessler J, Metcalf CJ, Grais RF, Luquero FJ, Cummings DA, Grenfell BT. Measuring the performance of vaccination programs using cross-sectional surveys: a likelihood framework and retrospective analysis. Plos Medicine. 8: e1001110. PMID 22039353 DOI: 10.1371/Journal.Pmed.1001110  0.594
2011 Althouse BM, Ng YY, Cummings DA. Prediction of dengue incidence using search query surveillance. Plos Neglected Tropical Diseases. 5: e1258. PMID 21829744 DOI: 10.1371/Journal.Pntd.0001258  0.624
2011 Lessler J, Cummings DA, Read JM, Wang S, Zhu H, Smith GJ, Guan Y, Jiang CQ, Riley S. Location-specific patterns of exposure to recent pre-pandemic strains of influenza A in southern China. Nature Communications. 2: 423. PMID 21829185 DOI: 10.1038/Ncomms1432  0.608
2011 van Panhuis WG, Luxemburger C, Pengsaa K, Limkittikul K, Sabchareon A, Lang J, Durbin AP, Cummings DA. Decay and persistence of maternal dengue antibodies among infants in Bangkok. The American Journal of Tropical Medicine and Hygiene. 85: 355-62. PMID 21813859 DOI: 10.4269/Ajtmh.2011.11-0125  0.331
2011 Fraser C, Cummings DA, Klinkenberg D, Burke DS, Ferguson NM. Influenza transmission in households during the 1918 pandemic. American Journal of Epidemiology. 174: 505-14. PMID 21749971 DOI: 10.1093/Aje/Kwr122  0.454
2011 Johansson MA, Hombach J, Cummings DA. Models of the impact of dengue vaccines: a review of current research and potential approaches. Vaccine. 29: 5860-8. PMID 21699949 DOI: 10.1016/J.Vaccine.2011.06.042  0.443
2011 Stebbins S, Cummings DA, Stark JH, Vukotich C, Mitruka K, Thompson W, Rinaldo C, Roth L, Wagner M, Wisniewski SR, Dato V, Eng H, Burke DS. Reduction in the incidence of influenza A but not influenza B associated with use of hand sanitizer and cough hygiene in schools: a randomized controlled trial. The Pediatric Infectious Disease Journal. 30: 921-6. PMID 21691245 DOI: 10.1097/Inf.0B013E3182218656  0.387
2011 Luquero FJ, Pham-Orsetti H, Cummings DA, Ngaunji PE, Nimpa M, Fermon F, Ngoe N, Sosler S, Strebel P, Grais RF. A long-lasting measles epidemic in Maroua, Cameroon 2008-2009: mass vaccination as response to the epidemic. The Journal of Infectious Diseases. 204: S243-51. PMID 21666169 DOI: 10.1093/Infdis/Jir093  0.396
2011 Reich NG, Perl TM, Cummings DA, Lessler J. Visualizing clinical evidence: citation networks for the incubation periods of respiratory viral infections. Plos One. 6: e19496. PMID 21559339 DOI: 10.1371/Journal.Pone.0019496  0.566
2011 Lee BY, Connor DL, Kitchen SB, Bacon KM, Shah M, Brown ST, Bailey RR, Laosiritaworn Y, Burke DS, Cummings DA. Economic value of dengue vaccine in Thailand. The American Journal of Tropical Medicine and Hygiene. 84: 764-72. PMID 21540387 DOI: 10.4269/Ajtmh.2011.10-0624  0.347
2011 Stebbins S, Stark JH, Prasad R, Thompson WW, Mitruka K, Rinaldo C, Vukotich CJ, Cummings DA. Sensitivity and specificity of rapid influenza testing of children in a community setting. Influenza and Other Respiratory Viruses. 5: 104-9. PMID 21306573 DOI: 10.1111/J.1750-2659.2010.00171.X  0.346
2011 Rodriguez-Barraquer I, Cordeiro MT, Braga C, de Souza WV, Marques ET, Cummings DA. From re-emergence to hyperendemicity: the natural history of the dengue epidemic in Brazil. Plos Neglected Tropical Diseases. 5: e935. PMID 21245922 DOI: 10.1371/Journal.Pntd.0000935  0.664
2011 Lessler J, Moss WJ, Lowther SA, Cummings DA. Maintaining high rates of measles immunization in Africa. Epidemiology and Infection. 139: 1039-49. PMID 20920382 DOI: 10.1017/S0950268810002232  0.6
2010 Yang Y, Halloran ME, Daniels MJ, Longini IM, Burke DS, Cummings DA. Modeling Competing Infectious Pathogens from a Bayesian Perspective: Application to Influenza Studies with Incomplete Laboratory Results. Journal of the American Statistical Association. 105: 1310-1322. PMID 21472041 DOI: 10.1198/Jasa.2010.Ap09581  0.423
2010 Lessler J, dos Santos T, Aguilera X, Brookmeyer R, Cummings DA. H1N1pdm in the Americas. Epidemics. 2: 132-8. PMID 20847900 DOI: 10.1016/J.Epidem.2010.07.001  0.592
2010 van Panhuis WG, Gibbons RV, Endy TP, Rothman AL, Srikiatkhachorn A, Nisalak A, Burke DS, Cummings DA. Inferring the serotype associated with dengue virus infections on the basis of pre- and postinfection neutralizing antibody titers. The Journal of Infectious Diseases. 202: 1002-10. PMID 20738205 DOI: 10.1086/656141  0.427
2010 Lessler J, Brookmeyer R, Reich NG, Nelson KE, Cummings DA, Perl TM. Identifying the probable timing and setting of respiratory virus infections. Infection Control and Hospital Epidemiology. 31: 809-15. PMID 20569117 DOI: 10.1086/655023  0.595
2010 Fried JR, Gibbons RV, Kalayanarooj S, Thomas SJ, Srikiatkhachorn A, Yoon IK, Jarman RG, Green S, Rothman AL, Cummings DA. Serotype-specific differences in the risk of dengue hemorrhagic fever: an analysis of data collected in Bangkok, Thailand from 1994 to 2006. Plos Neglected Tropical Diseases. 4: e617. PMID 20209155 DOI: 10.1371/Journal.Pntd.0000617  0.36
2010 Word DP, Young JK, Cummings D, Laird CD. Estimation of seasonal transmission parameters in childhood infectious disease using a stochastic continuous time model Computer Aided Chemical Engineering. 28: 229-234. DOI: 10.1016/S1570-7946(10)28039-2  0.349
2009 Lessler J, Reich NG, Cummings DA, Nair HP, Jordan HT, Thompson N. Outbreak of 2009 pandemic influenza A (H1N1) at a New York City school. The New England Journal of Medicine. 361: 2628-36. PMID 20042754 DOI: 10.1056/Nejmoa0906089  0.602
2009 Johansson MA, Cummings DA, Glass GE. Multiyear climate variability and dengue--El Niño southern oscillation, weather, and dengue incidence in Puerto Rico, Mexico, and Thailand: a longitudinal data analysis. Plos Medicine. 6: e1000168. PMID 19918363 DOI: 10.1371/Journal.Pmed.1000168  0.315
2009 Cummings DA, Iamsirithaworn S, Lessler JT, McDermott A, Prasanthong R, Nisalak A, Jarman RG, Burke DS, Gibbons RV. The impact of the demographic transition on dengue in Thailand: insights from a statistical analysis and mathematical modeling. Plos Medicine. 6: e1000139. PMID 19721696 DOI: 10.1371/Journal.Pmed.1000139  0.608
2009 Reich NG, Lessler J, Cummings DA, Brookmeyer R. Estimating incubation period distributions with coarse data. Statistics in Medicine. 28: 2769-84. PMID 19598148 DOI: 10.1002/Sim.3659  0.592
2009 Lessler J, Reich NG, Brookmeyer R, Perl TM, Nelson KE, Cummings DA. Incubation periods of acute respiratory viral infections: a systematic review. The Lancet. Infectious Diseases. 9: 291-300. PMID 19393959 DOI: 10.1016/S1473-3099(09)70069-6  0.58
2008 Epstein JM, Parker J, Cummings D, Hammond RA. Coupled contagion dynamics of fear and disease: mathematical and computational explorations. Plos One. 3: e3955. PMID 19079607 DOI: 10.1371/Journal.Pone.0003955  0.35
2008 Halloran ME, Ferguson NM, Eubank S, Longini IM, Cummings DA, Lewis B, Xu S, Fraser C, Vullikanti A, Germann TC, Wagener D, Beckman R, Kadau K, Barrett C, Macken CA, et al. Modeling targeted layered containment of an influenza pandemic in the United States. Proceedings of the National Academy of Sciences of the United States of America. 105: 4639-44. PMID 18332436 DOI: 10.1073/Pnas.0706849105  0.388
2007 Lessler J, Cummings DA, Fishman S, Vora A, Burke DS. Transmissibility of swine flu at Fort Dix, 1976. Journal of the Royal Society, Interface / the Royal Society. 4: 755-62. PMID 17412677 DOI: 10.1098/Rsif.2007.0228  0.617
2007 Billings L, Schwartz IB, Shaw LB, McCrary M, Burke DS, Cummings DA. Instabilities in multiserotype disease models with antibody-dependent enhancement. Journal of Theoretical Biology. 246: 18-27. PMID 17270219 DOI: 10.1016/J.Jtbi.2006.12.023  0.344
2007 Longini IM, Halloran ME, Nizam A, Yang Y, Xu S, Burke DS, Cummings DA, Epstein JM. Containing a large bioterrorist smallpox attack: a computer simulation approach. International Journal of Infectious Diseases : Ijid : Official Publication of the International Society For Infectious Diseases. 11: 98-108. PMID 16899385 DOI: 10.1016/J.Ijid.2006.03.002  0.392
2006 Burke DS, Epstein JM, Cummings DA, Parker JI, Cline KC, Singa RM, Chakravarty S. Individual-based computational modeling of smallpox epidemic control strategies. Academic Emergency Medicine : Official Journal of the Society For Academic Emergency Medicine. 13: 1142-9. PMID 17085740 DOI: 10.1197/J.Aem.2006.07.017  0.377
2006 Ferguson NM, Cummings DA, Fraser C, Cajka JC, Cooley PC, Burke DS. Strategies for mitigating an influenza pandemic. Nature. 442: 448-52. PMID 16642006 DOI: 10.1038/Nature04795  0.416
2006 Cummings DA, Moss WJ, Long K, Wiysonge CS, Muluh TJ, Kollo B, Nomo E, Wolfe ND, Burke DS. Improved measles surveillance in Cameroon reveals two major dynamic patterns of incidence. International Journal of Infectious Diseases : Ijid : Official Publication of the International Society For Infectious Diseases. 10: 148-55. PMID 16275043 DOI: 10.1016/J.Ijid.2004.10.010  0.372
2005 Schwartz IB, Shaw LB, Cummings DA, Billings L, McCrary M, Burke DS. Chaotic desynchronization of multistrain diseases. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 72: 066201. PMID 16486034 DOI: 10.1103/Physreve.72.066201  0.38
2005 Cummings DA, Schwartz IB, Billings L, Shaw LB, Burke DS. Dynamic effects of antibody-dependent enhancement on the fitness of viruses. Proceedings of the National Academy of Sciences of the United States of America. 102: 15259-64. PMID 16217017 DOI: 10.1073/Pnas.0507320102  0.392
2005 Ferguson NM, Cummings DA, Cauchemez S, Fraser C, Riley S, Meeyai A, Iamsirithaworn S, Burke DS. Strategies for containing an emerging influenza pandemic in Southeast Asia. Nature. 437: 209-14. PMID 16079797 DOI: 10.1038/Nature04017  0.395
2005 Longini IM, Nizam A, Xu S, Ungchusak K, Hanshaoworakul W, Cummings DA, Halloran ME. Containing pandemic influenza at the source. Science (New York, N.Y.). 309: 1083-7. PMID 16079251 DOI: 10.1126/Science.1115717  0.398
2004 Cummings DA, Irizarry RA, Huang NE, Endy TP, Nisalak A, Ungchusak K, Burke DS. Travelling waves in the occurrence of dengue haemorrhagic fever in Thailand. Nature. 427: 344-7. PMID 14737166 DOI: 10.1038/Nature02225  0.369
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