Shuhong Zhao, Ph.D. - Publications

Affiliations: 
2005 University of Cincinnati, Cincinnati, OH 
Area:
Statistics, Mathematics

55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhao C, Wang Y, Nie X, Han X, Liu H, Li G, Yang G, Ruan J, Ma Y, Li X, Cheng H, Zhao S, Fang Y, Xie S. Evaluation of the effects of sequence length and microsatellite instability on single-guide RNA activity and specificity. International Journal of Biological Sciences. 15: 2641-2653. PMID 31754336 DOI: 10.7150/ijbs.37152  0.36
2019 Han X, Xiong Y, Zhao C, Xie S, Li C, Li X, Liu X, Li K, Zhao S, Ruan J. Identification of Glyceraldehyde-3-Phosphate Dehydrogenase Gene as an Alternative Safe Harbor Locus in Pig Genome. Genes. 10. PMID 31470649 DOI: 10.3390/genes10090660  0.36
2019 Luan Y, Zhang L, Hu M, Xu Y, Hou Y, Li X, Zhao S, Zhao Y, Li C. Identification and Conservation Analysis of -Regulatory Elements in Pig Liver. Genes. 10. PMID 31067820 DOI: 10.3390/genes10050348  0.36
2019 Tang Z, Xu J, Yin L, Yin D, Zhu M, Yu M, Li X, Zhao S, Liu X. Genome-Wide Association Study Reveals Candidate Genes for Growth Relevant Traits in Pigs. Frontiers in Genetics. 10: 302. PMID 31024621 DOI: 10.3389/fgene.2019.00302  0.36
2019 Zhao C, Xie S, Wu H, Luan Y, Hu S, Ni J, Lin R, Zhao S, Zhang D, Li X. Quantification of allelic differential expression using a simple Fluorescence primer PCR-RFLP-based method. Scientific Reports. 9: 6334. PMID 31004110 DOI: 10.1038/s41598-019-42815-5  0.36
2019 Zhang W, Zhang S, Xu Y, Ma Y, Zhang D, Li X, Zhao S. The DNA Methylation Status of Wnt and Tgfβ Signals Is a Key Factor on Functional Regulation of Skeletal Muscle Satellite Cell Development. Frontiers in Genetics. 10: 220. PMID 30949196 DOI: 10.3389/fgene.2019.00220  0.36
2019 Ma H, Zhang S, Zhang K, Zhan H, Peng X, Xie S, Li X, Zhao S, Ma Y. Identifying Selection Signatures for Backfat Thickness in Yorkshire Pigs Highlights New Regions Affecting Fat Metabolism. Genes. 10. PMID 30925743 DOI: 10.3390/genes10040254  0.36
2019 Wang S, Sun Y, Ren R, Xie J, Tian X, Zhao S, Li X, Cao J. H3K27me3 Depletion during Differentiation Promotes Myogenic Transcription in Porcine Satellite Cells. Genes. 10. PMID 30893875 DOI: 10.3390/genes10030231  0.36
2018 Hou Y, Hu M, Zhou H, Li C, Li X, Liu X, Zhao Y, Zhao S. Neuronal Signal Transduction-Involved Genes in Pig Hypothalamus Affect Feed Efficiency as Revealed by Transcriptome Analysis. Biomed Research International. 2018: 5862571. PMID 30687750 DOI: 10.1155/2018/5862571  0.36
2018 Adetula AA, Liu X, Tran Thi TN, Bhuiyan AA, Du X, Zhu M, Li X, Zhao S, Ma Y, Wang H. Transcriptional Profiling of Leucocyte Count Variation from Porcine Peripheral Blood Reveals Differential Gene Expression. Biomed Research International. 2018: 1496536. PMID 30581844 DOI: 10.1155/2018/1496536  0.36
2018 Zhang D, Zhao S, Li X, Kirk JS, Tang DG. Prostate Luminal Progenitor Cells in Development and Cancer. Trends in Cancer. 4: 769-783. PMID 30352679 DOI: 10.1016/j.trecan.2018.09.003  0.36
2018 Ma Y, Zhang S, Zhang K, Fang C, Xie S, Du X, Li X, Ni D, Zhao S. Genomic Analysis To Identify Signatures of Artificial Selection and Loci Associated with Important Economic Traits in Duroc Pigs. G3 (Bethesda, Md.). PMID 30237295 DOI: 10.1534/g3.118.200665  0.36
2018 Chen Z, Wang X, Ashraf U, Zheng B, Ye J, Zhou D, Zhang H, Song Y, Chen H, Zhao S, Cao S. Activation of neuronal N-methyl-D-aspartate receptor plays a pivotal role in Japanese encephalitis virus-induced neuronal cell damage. Journal of Neuroinflammation. 15: 238. PMID 30144801 DOI: 10.1186/s12974-018-1280-8  0.36
2018 Xu Y, Qi X, Hu M, Lin R, Hou Y, Wang Z, Zhou H, Zhao Y, Luan Y, Zhao S, Li X. Transcriptome Analysis of Adipose Tissue Indicates That the cAMP Signaling Pathway Affects the Feed Efficiency of Pigs. Genes. 9. PMID 29973485 DOI: 10.3390/genes9070336  0.36
2018 Zhang W, Xu Y, Zhang L, Wang S, Yin B, Zhao S, Li X. Synergistic effects of TGFβ2, WNT9a, and FGFR4 signals attenuate satellite cell differentiation during skeletal muscle development. Aging Cell. e12788. PMID 29869452 DOI: 10.1111/acel.12788  0.36
2018 Ju Z, Huang J, Jiang Q, Wang C, Wang X, Zhao S. Identification of bta-miR-15a∼16a cluster expression, localization and regulated target in Holsteins. Molecular and Cellular Probes. PMID 29859243 DOI: 10.1016/j.mcp.2018.05.003  0.36
2018 Li Y, Fang C, Fu Y, Hu A, Li C, Zou C, Li X, Zhao S, Zhang C, Li C. A survey of transcriptome complexity in Sus scrofa using single-molecule long-read sequencing. Dna Research : An International Journal For Rapid Publication of Reports On Genes and Genomes. PMID 29850846 DOI: 10.1093/dnares/dsy014  0.36
2018 Hou Y, Fu L, Li J, Li J, Zhao Y, Luan Y, Liu A, Liu H, Li X, Zhao S, Li C. Transcriptome Analysis of Potential miRNA Involved in Adipogenic Differentiation of C2C12 Myoblasts. Lipids. PMID 29766503 DOI: 10.1002/lipd.12032  0.36
2018 Li X, Wang X, Mao L, Zhao S, Wei H. LncRNA TP73‑AS1 predicts poor prognosis and promotes cell proliferation in ovarian cancer via cell cycle and apoptosis regulation. Molecular Medicine Reports. PMID 29750302 DOI: 10.3892/mmr.2018.8951  0.36
2018 Chen J, Ni P, Li X, Han J, Jakovlić I, Zhang C, Zhao S. Population size may shape the accumulation of functional mutations following domestication. Bmc Evolutionary Biology. 18: 4. PMID 29351740 DOI: 10.1186/s12862-018-1120-6  0.36
2017 Zhao C, Zheng X, Qu W, Li G, Li X, Miao YL, Han X, Liu X, Li Z, Ma Y, Shao Q, Li H, Sun F, Xie S, Zhao S. CRISPR-offinder: a CRISPR guide RNA design and off-target searching tool for user-defined protospacer adjacent motif. International Journal of Biological Sciences. 13: 1470-1478. PMID 29230095 DOI: 10.7150/ijbs.21312  0.36
2017 Liu X, Wang Y, Zhao S, Li X. Fibroblast Growth Factor 21 Promotes C2C12 Cells Myogenic Differentiation by Enhancing Cell Cycle Exit. Biomed Research International. 2017: 1648715. PMID 29109955 DOI: 10.1155/2017/1648715  0.36
2017 Miao Y, Soudy F, Xu Z, Liao M, Zhao S, Li X. Candidate Gene Identification of Feed Efficiency and Coat Color Traits in a C57BL/6J × Kunming F2 Mice Population Using Genome-Wide Association Study. Biomed Research International. 2017: 7132941. PMID 28828387 DOI: 10.1155/2017/7132941  0.36
2017 Fu L, Xu Y, Hou Y, Qi X, Zhou L, Liu H, Luan Y, Jing L, Miao Y, Zhao S, Liu H, Li X. Proteomic analysis indicates that mitochondrial energy metabolism in skeletal muscle tissue is negatively correlated with feed efficiency in pigs. Scientific Reports. 7: 45291. PMID 28345649 DOI: 10.1038/srep45291  0.36
2016 Li M, Chen L, Tian S, Lin Y, Tang Q, Zhou X, Li D, Yeung CK, Che T, Jin L, Fu Y, Ma J, Wang X, Jiang A, Lan J, ... ... Zhao S, et al. Comprehensive variation discovery and recovery of missing sequence in the pig genome using multiple de novo assemblies. Genome Research. PMID 27646534 DOI: 10.1101/gr.207456.116  0.36
2016 Zhao Y, Hou Y, Liu F, Liu A, Jing L, Zhao C, Luan Y, Miao Y, Zhao S, Li X. Transcriptome Analysis Reveals that Vitamin A Metabolism in the Liver Affects Feed Efficiency in Pigs. G3 (Bethesda, Md.). PMID 27633790 DOI: 10.1534/g3.116.032839  0.36
2016 Li C, He H, Liu A, Liu H, Huang H, Zhao C, Jing L, Ni J, Yin L, Hu S, Wu H, Li X, Zhao S. Natural Functional SNPs in miR-155 Alter Its Expression Level, Blood Cell Counts, and Immune Responses. Frontiers in Immunology. 7: 295. PMID 27532002 DOI: 10.3389/fimmu.2016.00295  0.36
2016 Zhao Y, Hou Y, Zhao C, Liu F, Luan Y, Jing L, Li X, Zhu M, Zhao S. Cis-Natural Antisense Transcripts Are Mainly Co-expressed with Their Sense Transcripts and Primarily Related to Energy Metabolic Pathways during Muscle Development. International Journal of Biological Sciences. 12: 1010-21. PMID 27489504 DOI: 10.7150/ijbs.14825  0.36
2016 Yang S, Pei Y, Li X, Zhao S, Zhu M, Zhao A. miR-124 attenuates Japanese encephalitis virus replication by targeting DNM2. Virology Journal. 13: 105. PMID 27329300 DOI: 10.1186/s12985-016-0562-y  0.36
2015 Liu R, Wang M, Su L, Li X, Zhao S, Yu M. The Expression Pattern of microRNAs and the Associated Pathways Involved in the Development of Porcine Placental Folds That Contribute to the Expansion of the Exchange Surface Area. Biology of Reproduction. PMID 26157073 DOI: 10.1095/biolreprod.114.126540  0.36
2015 Jing L, Hou Y, Wu H, Miao Y, Li X, Cao J, Michael Brameld J, Parr T, Zhao S. Transcriptome analysis of mRNA and miRNA in skeletal muscle indicates an important network for differential Residual Feed Intake in pigs. Scientific Reports. 5: 11953. PMID 26150313 DOI: 10.1038/srep11953  0.36
2015 Miao Y, Yang J, Xu Z, Jing L, Zhao S, Li X. RNA sequencing identifies upregulated kyphoscoliosis peptidase and phosphatidic acid signaling pathways in muscle hypertrophy generated by transgenic expression of myostatin propeptide. International Journal of Molecular Sciences. 16: 7976-94. PMID 25860951 DOI: 10.3390/ijms16047976  0.36
2014 Cao J, Huang T, Li X, Zhao S. Interactome mapping reveals important pathways in skeletal muscle development of pigs. International Journal of Molecular Sciences. 15: 21788-802. PMID 25431924 DOI: 10.3390/ijms151221788  0.36
2014 Li G, Jia Q, Zhao J, Li X, Yu M, Samuel MS, Zhao S, Prather RS, Li C. Dysregulation of genome-wide gene expression and DNA methylation in abnormal cloned piglets. Bmc Genomics. 15: 811. PMID 25253444 DOI: 10.1186/1471-2164-15-811  0.36
2014 Zhao S, Liu Y, Li X. [Effect of maternal lipopolysaccharides exposure during pregnancy on vascular structure in neonatal offspring rats]. Zhonghua Xin Xue Guan Bing Za Zhi. 42: 498-503. PMID 25164225  0.36
2014 Javed R, Jing L, Yang J, Li X, Cao J, Zhao S. miRNA transcriptome of hypertrophic skeletal muscle with overexpressed myostatin propeptide. Biomed Research International. 2014: 328935. PMID 25147795 DOI: 10.1155/2014/328935  0.36
2014 Li X, Tang J, Xu J, Zhu M, Cao J, Liu Y, Yu M, Zhao S. The inflammation-related gene S100A12 is positively regulated by C/EBPβ and AP-1 in pigs. International Journal of Molecular Sciences. 15: 13802-16. PMID 25110868 DOI: 10.3390/ijms150813802  0.36
2014 Huang J, Ma G, Fu L, Jia H, Zhu M, Li X, Zhao S. Pseudorabies viral replication is inhibited by a novel target of miR-21. Virology. 456: 319-28. PMID 24889251 DOI: 10.1016/j.virol.2014.03.032  0.36
2014 Su L, Liu R, Cheng W, Zhu M, Li X, Zhao S, Yu M. Expression patterns of microRNAs in porcine endometrium and their potential roles in embryo implantation and placentation. Plos One. 9: e87867. PMID 24505325 DOI: 10.1371/journal.pone.0087867  0.36
2014 Hong L, Hou C, Li X, Li C, Zhao S, Yu M. Expression of heparanase is associated with breed-specific morphological characters of placental folded bilayer between Yorkshire and Meishan pigs. Biology of Reproduction. 90: 56. PMID 24429218 DOI: 10.1095/biolreprod.113.114181  0.36
2013 Liu G, Liu R, Li Q, Tang X, Yu M, Li X, Cao J, Zhao S. Identification of microRNAs in wool follicles during anagen, catagen, and telogen phases in Tibetan sheep. Plos One. 8: e77801. PMID 24204975 DOI: 10.1371/journal.pone.0077801  0.36
2013 Yang S, Liu X, Li X, Sun S, Sun F, Fan B, Zhao S. MicroRNA-124 reduces caveolar density by targeting caveolin-1 in porcine kidney epithelial PK15 cells. Molecular and Cellular Biochemistry. 384: 213-9. PMID 24000013 DOI: 10.1007/s11010-013-1800-x  0.36
2013 Yang S, He M, Liu X, Li X, Fan B, Zhao S. Japanese encephalitis virus infects porcine kidney epithelial PK15 cells via clathrin- and cholesterol-dependent endocytosis. Virology Journal. 10: 258. PMID 23937769 DOI: 10.1186/1743-422X-10-258  0.36
2013 Shen H, Liu T, Fu L, Zhao S, Fan B, Cao J, Li X. Identification of microRNAs involved in dexamethasone-induced muscle atrophy. Molecular and Cellular Biochemistry. 381: 105-13. PMID 23716137 DOI: 10.1007/s11010-013-1692-9  0.36
2013 Wu D, Song D, Li X, Yu M, Li C, Zhao S. Molecular characterization and identification of the E2/P4 response element in the porcine HOXA10 gene. Molecular and Cellular Biochemistry. 374: 213-22. PMID 23160802 DOI: 10.1007/s11010-012-1522-5  0.36
2013 Li C, He H, Zhu M, Zhao S, Li X. Molecular characterisation of porcine miR-155 and its regulatory roles in the TLR3/TLR4 pathways. Developmental and Comparative Immunology. 39: 110-6. PMID 22301067 DOI: 10.1016/j.dci.2012.01.001  0.36
2012 Gu T, Su X, Zhou Q, Li X, Yu M, Ding Y, Zhao S, Li C. Molecular characterization of the Neuronatin gene in the porcine placenta. Plos One. 7: e43325. PMID 22937033 DOI: 10.1371/journal.pone.0043325  0.36
2012 Wu H, Wang F, Hu S, Yin C, Li X, Zhao S, Wang J, Yan X. MiR-20a and miR-106b negatively regulate autophagy induced by leucine deprivation via suppression of ULK1 expression in C2C12 myoblasts. Cellular Signalling. 24: 2179-86. PMID 22781751 DOI: 10.1016/j.cellsig.2012.07.001  0.36
2012 Hamza H, Cao J, Li X, Li C, Zhu M, Zhao S. Hepatitis B vaccine induces apoptotic death in Hepa1-6 cells. Apoptosis : An International Journal On Programmed Cell Death. 17: 516-27. PMID 22249285 DOI: 10.1007/s10495-011-0690-1  0.36
2012 Hamza H, Cao J, Li X, Zhao S. In vivo study of hepatitis B vaccine effects on inflammation and metabolism gene expression. Molecular Biology Reports. 39: 3225-33. PMID 21691704 DOI: 10.1007/s11033-011-1090-x  0.36
2011 Chen H, Lunney JK, Cheng L, Li X, Cao J, Zhu M, Zhao S. Porcine S100A8 and S100A9: molecular characterizations and crucial functions in response to Haemophilus parasuis infection. Developmental and Comparative Immunology. 35: 490-500. PMID 21185856 DOI: 10.1016/j.dci.2010.11.017  0.36
2010 Chen H, Cheng L, Yang S, Liu X, Liu Y, Tang J, Li X, He Q, Zhao S. Molecular characterization, induced expression, and transcriptional regulation of porcine S100A12 gene. Molecular Immunology. 47: 1601-7. PMID 20189650 DOI: 10.1016/j.molimm.2010.01.024  0.36
2009 Chen H, Li C, Fang M, Zhu M, Li X, Zhou R, Li K, Zhao S. Understanding Haemophilus parasuis infection in porcine spleen through a transcriptomics approach. Bmc Genomics. 10: 64. PMID 19196461 DOI: 10.1186/1471-2164-10-64  0.36
2007 Li X, Zhu Z, Mo D, Wang H, Yang S, Zhao S, Li K. Comparative molecular characterization of ADSS1 and ADSS2 genes in pig (Sus scrofa). Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology. 147: 271-7. PMID 17347008 DOI: 10.1016/j.cbpb.2007.01.013  0.36
2000 Steenland K, Deddens JA, Zhao S. Biases in estimating the effect of cumulative exposure in log-linear models when estimated exposure levels are assigned. Scandinavian Journal of Work, Environment & Health. 26: 37-43. PMID 10744176  0.56
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