Orin C. Shanks, Ph.D. - Publications

Affiliations: 
2003 Oregon State University, Corvallis, OR 
Area:
Genetics, Archaeology Anthropology

74 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Shanks OC, Diedrich A, Sivaganesan M, Willis JR, Sharifi A. Quantitative fecal source characterization of urban municipal storm sewer system outfall 'wet' and 'dry' weather discharges. Water Research. 259: 121857. PMID 38851116 DOI: 10.1016/j.watres.2024.121857  0.423
2024 Paar J, Willis JR, Sette L, Wood SA, Bogomolni A, Dulac M, Sivaganesan M, Shanks OC. Occurrence of recreational water quality monitoring general fecal indicator bacteria and fecal source identification genetic markers in gray seal scat. The Science of the Total Environment. 934: 173220. PMID 38761521 DOI: 10.1016/j.scitotenv.2024.173220  0.45
2024 Sivaganesan M, Willis JR, Diedrich A, Shanks OC. A fecal score approximation model for analysis of real-time quantitative PCR fecal source identification measurements. Water Research. 255: 121482. PMID 38598887 DOI: 10.1016/j.watres.2024.121482  0.351
2023 Demeter K, Linke R, Ballesté E, Reischer G, Mayer RE, Vierheilig J, Kolm C, Stevenson ME, Derx J, Kirschner AKT, Sommer R, Shanks OC, Blanch AR, Rose J, Ahmed W, et al. Have genetic targets for faecal pollution diagnostics and source tracking revolutionised water quality analysis yet? Fems Microbiology Reviews. PMID 37286726 DOI: 10.1093/femsre/fuad028  0.386
2023 Diedrich A, Sivaganesan M, Willis JR, Sharifi A, Shanks OC. Genetic fecal source identification in urban streams impacted by municipal separate storm sewer system discharges. Plos One. 18: e0278548. PMID 36701383 DOI: 10.1371/journal.pone.0278548  0.388
2022 Sivaganesan M, Willis JR, Karim M, Babatola A, Catoe D, Boehm AB, Wilder M, Green H, Lobos A, Harwood VJ, Hertel S, Klepikow R, Howard MF, Laksanalamai P, Roundtree A, ... ... Shanks OC, et al. Interlaboratory performance and quantitative PCR data acceptance metrics for NIST SRM® 2917. Water Research. 225: 119162. PMID 36191524 DOI: 10.1016/j.watres.2022.119162  0.34
2022 Cyterski M, Shanks OC, Wanjugi P, McMinn B, Korajkic A, Oshima K, Haugland R. Bacterial and viral fecal indicator predictive modeling at three Great Lakes recreational beach sites. Water Research. 223: 118970. PMID 35985141 DOI: 10.1016/j.watres.2022.118970  0.335
2022 Willis JR, Sivaganesan M, Haugland RA, Kralj J, Servetas S, Hunter ME, Jackson SA, Shanks OC. Performance of NIST SRM® 2917 with 13 recreational water quality monitoring qPCR assays. Water Research. 212: 118114. PMID 35091220 DOI: 10.1016/j.watres.2022.118114  0.35
2021 Brumfield KD, Cotruvo JA, Shanks OC, Sivaganesan M, Hey J, Hasan NA, Huq A, Colwell RR, Leddy MB. Metagenomic Sequencing and Quantitative Real-Time PCR for Fecal Pollution Assessment in an Urban Watershed. Frontiers in Water. 3: 626849. PMID 34263162 DOI: 10.3389/frwa.2021.626849  0.501
2021 Li X, Kelty CA, Sivaganesan M, Shanks OC. Variable fecal source prioritization in recreational waters routinely monitored with viral and bacterial general indicators. Water Research. 192: 116845. PMID 33508720 DOI: 10.1016/j.watres.2021.116845  0.427
2020 Mattioli MC, Benedict KM, Murphy J, Kahler A, Kline KE, Longenberger A, Mitchell PK, Watkins S, Berger P, Shanks OC, Barrett CE, Barclay L, Hall AJ, Hill V, Weltman A. Identifying septic pollution exposure routes during a waterborne norovirus outbreak - A new application for human-associated microbial source tracking qPCR. Journal of Microbiological Methods. 106091. PMID 33137355 DOI: 10.1016/j.mimet.2020.106091  0.374
2020 Schoen ME, Boehm AB, Soller J, Shanks OC. Contamination scenario matters when using viral and bacterial human-associated genetic markers as indicators of health risk in untreated sewage-impacted recreational waters. Environmental Science & Technology. PMID 32969642 DOI: 10.1021/acs.est.0c02189  0.307
2020 Shrestha A, Kelty CA, Sivaganesan M, Shanks OC, Dorevitch S. Fecal pollution source characterization at non-point source impacted beaches under dry and wet weather conditions. Water Research. 182: 116014. PMID 32622131 DOI: 10.1016/J.Watres.2020.116014  0.522
2020 Korajkic A, McMinn B, Herrmann MP, Sivaganesan M, Kelty CA, Clinton P, Nash MS, Shanks OC. Viral and Bacterial Fecal Indicators in Untreated Wastewater Across the Contiguous United States Exhibit Geospatial Trends. Applied and Environmental Microbiology. PMID 32060019 DOI: 10.1128/Aem.02967-19  0.51
2019 Li X, Sivaganesan M, Kelty CA, Zimmer-Faust A, Clinton P, Reichman JR, Johnson Y, Matthews W, Bailey S, Shanks OC. Large-scale implementation of standardized quantitative real-time PCR fecal source identification procedures in the Tillamook Bay Watershed. Plos One. 14: e0216827. PMID 31170166 DOI: 10.1371/Journal.Pone.0216827  0.484
2019 Korajkic A, McMinn BR, Ashbolt NJ, Sivaganesan M, Harwood VJ, Shanks OC. Extended persistence of general and cattle-associated fecal indicators in marine and freshwater environment. The Science of the Total Environment. 650: 1292-1302. PMID 30308816 DOI: 10.1016/J.Scitotenv.2018.09.108  0.497
2018 Li X, Peed L, Sivaganesan M, Kelty CA, Nietch C, Shanks OC. Evidence of Genetic Fecal Marker Interactions between Water Column and Periphyton in Artificial Streams. Acs Omega. 3: 10107-10113. PMID 31459140 DOI: 10.1021/acsomega.8b01785  0.376
2018 McMinn BR, Rhodes ER, Huff EM, Wanjugi P, Ware MM, Nappier SP, Cyterski M, Shanks OC, Oshima K, Korajkic A. Comparison of somatic and F+ coliphage enumeration methods with large volume surface water samples. Journal of Virological Methods. PMID 30096350 DOI: 10.1016/J.Jviromet.2018.08.007  0.354
2018 Wanjugi P, Sivaganesan M, Korajkic A, McMinn B, Kelty CA, Rhodes E, Cyterski M, Zepp R, Oshima K, Stachler E, Kinzelman J, Kurdas SR, Citriglia M, Hsu FC, Shanks OC. Incidence of somatic and F+ coliphage in Great Lake Basin recreational waters. Water Research. 140: 200-210. PMID 29715644 DOI: 10.1016/J.Watres.2018.04.055  0.462
2018 Mayer RE, Reischer G, Ixenmaier SK, Derx J, Blaschke AP, Ebdon JE, Linke R, Egle L, Ahmed W, Blanch A, Byamukama D, Savill M, Mushi D, Cristóbal HA, Edge TA, ... ... Shanks OC, et al. Global Distribution of Human-associated Fecal Genetic Markers in Reference Samples from Six Continents. Environmental Science & Technology. PMID 29570973 DOI: 10.1021/Acs.Est.7B04438  0.513
2017 Cao Y, Sivaganesan M, Kelty CA, Wang D, Boehm AB, Griffith JF, Weisberg SB, Shanks OC. A human fecal contamination score for ranking recreational sites using the HF183/BacR287 quantitative real-time PCR method. Water Research. 128: 148-156. PMID 29101858 DOI: 10.1016/J.Watres.2017.10.071  0.493
2017 Stachler E, Kelty C, Sivaganesan M, Li X, Bibby K, Shanks OC. Quantitative CrAssphage PCR Assays for Human Fecal Pollution Measurement. Environmental Science & Technology. PMID 28700235 DOI: 10.1021/Acs.Est.7B02703  0.558
2016 Boehm AB, Wang D, Ercumen A, Shea M, Harris AR, Shanks OC, Kelty C, Ahmed A, Mahmud ZH, Arnold BF, Chase C, Kullmann C, Colford JM, Luby SP, Pickering AJ. Occurrence of Host-Associated Fecal Markers on Child Hands, Household Soil, and Drinking Water in Rural Bangladeshi Households. Environmental Science & Technology Letters. 3: 393-398. PMID 32607385 DOI: 10.1021/Acs.Estlett.6B00382  0.409
2016 Wanjugi P, Sivaganesan M, Korajkic A, Kelty CA, McMinn B, Ulrich R, Harwood VJ, Shanks OC. Differential decomposition of bacterial and viral fecal indicators in common human pollution types. Water Research. 105: 591-601. PMID 27693971 DOI: 10.1016/J.Watres.2016.09.041  0.495
2016 Shanks OC, Kelty CA, Oshiro R, Haugland RA, Madi T, Brooks L, Field KG, Sivaganesan M. Data Acceptance Criteria for Standardized Human-Associated Fecal Source Identification Quantitative Real-Time PCR Methods. Applied and Environmental Microbiology. PMID 26921430 DOI: 10.1128/Aem.03661-15  0.473
2015 Green HC, Fisher JC, McLellan SL, Sogin ML, Shanks OC. Identification of specialists and abundance-occupancy relationships among intestinal bacteria of Aves, Mammalia, and Actinopterygii. Applied and Environmental Microbiology. PMID 26712546 DOI: 10.1128/Aem.02456-15  0.376
2015 Fisher JC, Eren AM, Green HC, Shanks OC, Morrison HG, Vineis JH, Sogin ML, McLellan SL. Comparison of sewage and animal fecal microbiomes using oligotyping reveals potential human fecal indicators in multiple taxonomic groups. Applied and Environmental Microbiology. PMID 26231648 DOI: 10.1128/Aem.01524-15  0.514
2015 Korajkic A, Parfrey LW, McMinn BR, Baeza YV, VanTeuren W, Knight R, Shanks OC. Changes in bacterial and eukaryotic communities during sewage decomposition in Mississippi river water. Water Research. 69: 30-9. PMID 25463929 DOI: 10.1016/J.Watres.2014.11.003  0.41
2015 Boehm AB, Soller JA, Shanks OC. Human-Associated Fecal Quantitative Polymerase Chain Reaction Measurements and Simulated Risk of Gastrointestinal Illness in Recreational Waters Contaminated with Raw Sewage Environmental Science and Technology Letters. 2: 270-275. DOI: 10.1021/Acs.Estlett.5B00219  0.423
2014 Green HC, White KM, Kelty CA, Shanks OC. Development of rapid canine fecal source identification PCR-based assays. Environmental Science & Technology. 48: 11453-61. PMID 25203917 DOI: 10.1021/Es502637B  0.543
2014 Molina M, Hunter S, Cyterski M, Peed LA, Kelty CA, Sivaganesan M, Mooney T, Prieto L, Shanks OC. Factors affecting the presence of human-associated and fecal indicator real-time quantitative PCR genetic markers in urban-impacted recreational beaches. Water Research. 64: 196-208. PMID 25061692 DOI: 10.1016/J.Watres.2014.06.036  0.495
2014 Korajkic A, McMinn BR, Shanks OC, Sivaganesan M, Fout GS, Ashbolt NJ. Biotic interactions and sunlight affect persistence of fecal indicator bacteria and microbial source tracking genetic markers in the upper Mississippi river. Applied and Environmental Microbiology. 80: 3952-61. PMID 24747902 DOI: 10.1128/Aem.00388-14  0.495
2014 Green HC, Haugland RA, Varma M, Millen HT, Borchardt MA, Field KG, Walters WA, Knight R, Sivaganesan M, Kelty CA, Shanks OC. Improved HF183 quantitative real-time PCR assay for characterization of human fecal pollution in ambient surface water samples. Applied and Environmental Microbiology. 80: 3086-94. PMID 24610857 DOI: 10.1128/Aem.04137-13  0.522
2014 Riedel TE, Zimmer-Faust AG, Thulsiraj V, Madi T, Hanley KT, Ebentier DL, Byappanahalli M, Layton B, Raith M, Boehm AB, Griffith JF, Holden PA, Shanks OC, Weisberg SB, Jay JA. Detection limits and cost comparisons of human- and gull-associated conventional and quantitative PCR assays in artificial and environmental waters. Journal of Environmental Management. 136: 112-20. PMID 24583609 DOI: 10.1016/J.Jenvman.2014.01.029  0.458
2014 Shanks OC, Peed L, Sivaganesan M, Haugland RA, Chern EC. Human fecal source identification with real-time quantitative PCR. Methods in Molecular Biology (Clifton, N.J.). 1096: 85-99. PMID 24515362 DOI: 10.1007/978-1-62703-712-9_7  0.546
2014 Shanks OC, Kelty CA, Peed L, Sivaganesan M, Mooney T, Jenkins M. Age-related shifts in the density and distribution of genetic marker water quality indicators in cow and calf feces Applied and Environmental Microbiology. 80: 1588-1594. PMID 24362434 DOI: 10.1128/Aem.03581-13  0.5
2013 Layton BA, Cao Y, Ebentier DL, Hanley K, Ballesté E, Brandão J, Byappanahalli M, Converse R, Farnleitner AH, Gentry-Shields J, Gidley ML, Gourmelon M, Lee CS, Lee J, Lozach S, ... ... Shanks O, et al. Performance of human fecal anaerobe-associated PCR-based assays in a multi-laboratory method evaluation study. Water Research. 47: 6897-908. PMID 23992621 DOI: 10.1016/J.Watres.2013.05.060  0.533
2013 Schriewer A, Goodwin KD, Sinigalliano CD, Cox AM, Wanless D, Bartkowiak J, Ebentier DL, Hanley KT, Ervin J, Deering LA, Shanks OC, Peed LA, Meijer WG, Griffith JF, SantoDomingo J, et al. Performance evaluation of canine-associated Bacteroidales assays in a multi-laboratory comparison study. Water Research. 47: 6909-20. PMID 23916711 DOI: 10.1016/J.Watres.2013.03.062  0.485
2013 Ebentier DL, Hanley KT, Cao Y, Badgley BD, Boehm AB, Ervin JS, Goodwin KD, Gourmelon M, Griffith JF, Holden PA, Kelty CA, Lozach S, McGee C, Peed LA, Raith M, ... ... Shanks OC, et al. Evaluation of the repeatability and reproducibility of a suite of qPCR-based microbial source tracking methods. Water Research. 47: 6839-48. PMID 23911226 DOI: 10.1016/J.Watres.2013.01.060  0.47
2013 Stewart JR, Boehm AB, Dubinsky EA, Fong TT, Goodwin KD, Griffith JF, Noble RT, Shanks OC, Vijayavel K, Weisberg SB. Recommendations following a multi-laboratory comparison of microbial source tracking methods. Water Research. 47: 6829-38. PMID 23891204 DOI: 10.1016/J.Watres.2013.04.063  0.533
2013 Wang D, Farnleitner AH, Field KG, Green HC, Shanks OC, Boehm AB. Enterococcus and Escherichia coli fecal source apportionment with microbial source tracking genetic markers--is it feasible? Water Research. 47: 6849-61. PMID 23890872 DOI: 10.1016/J.Watres.2013.02.058  0.485
2013 Boehm AB, Van De Werfhorst LC, Griffith JF, Holden PA, Jay JA, Shanks OC, Wang D, Weisberg SB. Performance of forty-one microbial source tracking methods: a twenty-seven lab evaluation study. Water Research. 47: 6812-28. PMID 23880218 DOI: 10.1016/J.Watres.2012.12.046  0.491
2013 Raith MR, Kelty CA, Griffith JF, Schriewer A, Wuertz S, Mieszkin S, Gourmelon M, Reischer GH, Farnleitner AH, Ervin JS, Holden PA, Ebentier DL, Jay JA, Wang D, Boehm AB, ... ... Shanks OC, et al. Comparison of PCR and quantitative real-time PCR methods for the characterization of ruminant and cattle fecal pollution sources. Water Research. 47: 6921-8. PMID 23871256 DOI: 10.1016/J.Watres.2013.03.061  0.538
2013 Ervin JS, Russell TL, Layton BA, Yamahara KM, Wang D, Sassoubre LM, Cao Y, Kelty CA, Sivaganesan M, Boehm AB, Holden PA, Weisberg SB, Shanks OC. Characterization of fecal concentrations in human and other animal sources by physical, culture-based, and quantitative real-time PCR methods. Water Research. 47: 6873-82. PMID 23871252 DOI: 10.1016/J.Watres.2013.02.060  0.49
2013 McLellan SL, Newton RJ, Vandewalle JL, Shanks OC, Huse SM, Eren AM, Sogin ML. Sewage reflects the distribution of human faecal Lachnospiraceae. Environmental Microbiology. 15: 2213-27. PMID 23438335 DOI: 10.1111/1462-2920.12092  0.483
2013 Shanks OC, Newton RJ, Kelty CA, Huse SM, Sogin ML, McLellan SL. Comparison of the microbial community structures of untreated wastewaters from different geographic locales. Applied and Environmental Microbiology. 79: 2906-13. PMID 23435885 DOI: 10.1128/Aem.03448-12  0.446
2013 Korajkic A, McMinn BR, Harwood VJ, Shanks OC, Fout GS, Ashbolt NJ. Differential decay of enterococci and Escherichia coli originating from two fecal pollution sources. Applied and Environmental Microbiology. 79: 2488-92. PMID 23377944 DOI: 10.1128/Aem.03781-12  0.437
2013 Wang D, Green HC, Shanks OC, Boehm AB. New Performance Metrics for Quantitative Polymerase Chain Reaction-Based Microbial Source Tracking Methods Environmental Science and Technology Letters. 1: 20-25. DOI: 10.1021/Ez400022T  0.387
2012 Converse RR, Kinzelman JL, Sams EA, Hudgens E, Dufour AP, Ryu H, Santo-Domingo JW, Kelty CA, Shanks OC, Siefring SD, Haugland RA, Wade TJ. Dramatic improvements in beach water quality following gull removal. Environmental Science & Technology. 46: 10206-13. PMID 22913457 DOI: 10.1021/Es302306B  0.416
2012 Kelty CA, Varma M, Sivaganesan M, Haugland RA, Shanks OC. Distribution of genetic marker concentrations for fecal indicator bacteria in sewage and animal feces Applied and Environmental Microbiology. 78: 4225-4232. PMID 22504809 DOI: 10.1128/Aem.07819-11  0.463
2012 Shanks OC, Sivaganesan M, Peed L, Kelty CA, Blackwood AD, Greene MR, Noble RT, Bushon RN, Stelzer EA, Kinzelman J, Anan'eva T, Sinigalliano C, Wanless D, Griffith J, Cao Y, et al. Interlaboratory comparison of real-time PCR protocols for quantification of general fecal indicator bacteria. Environmental Science & Technology. 46: 945-53. PMID 22133009 DOI: 10.1021/Es2031455  0.529
2011 Green HC, Shanks OC, Sivaganesan M, Haugland RA, Field KG. Differential decay of human faecal Bacteroides in marine and freshwater. Environmental Microbiology. 13: 3235-49. PMID 21883797 DOI: 10.1111/J.1462-2920.2011.02549.X  0.471
2011 Peed LA, Nietch CT, Kelty CA, Meckes M, Mooney T, Sivaganesan M, Shanks OC. Combining land use information and small stream sampling with PCR-based methods for better characterization of diffuse sources of human fecal pollution Environmental Science and Technology. 45: 5652-5659. PMID 21662992 DOI: 10.1021/Es2003167  0.486
2011 Rogers SW, Donnelly M, Peed L, Kelty CA, Mondal S, Zhong Z, Shanks OC. Decay of bacterial pathogens, fecal indicators, and real-time quantitative PCR genetic markers in manure-amended soils. Applied and Environmental Microbiology. 77: 4839-48. PMID 21642395 DOI: 10.1128/Aem.02427-10  0.401
2011 Shanks OC, Kelty CA, Archibeque S, Jenkins M, Newton RJ, McLellan SL, Huse SM, Sogin ML. Community structures of fecal bacteria in cattle from different animal feeding operations. Applied and Environmental Microbiology. 77: 2992-3001. PMID 21378055 DOI: 10.1128/Aem.02988-10  0.36
2010 Shanks OC, White K, Kelty CA, Sivaganesan M, Blannon J, Meckes M, Varma M, Haugland RA. Performance of PCR-based assays targeting Bacteroidales genetic markers of human fecal pollution in sewage and fecal samples. Environmental Science & Technology. 44: 6281-8. PMID 20704227 DOI: 10.1021/Es100311N  0.545
2010 Sivaganesan M, Haugland RA, Chern EC, Shanks OC. Improved strategies and optimization of calibration models for real-time PCR absolute quantification. Water Research. 44: 4726-35. PMID 20701947 DOI: 10.1016/J.Watres.2010.07.066  0.391
2010 Haugland RA, Varma M, Sivaganesan M, Kelty C, Peed L, Shanks OC. Evaluation of genetic markers from the 16S rRNA gene V2 region for use in quantitative detection of selected Bacteroidales species and human fecal waste by qPCR Systematic and Applied Microbiology. 33: 348-357. PMID 20655680 DOI: 10.1016/J.Syapm.2010.06.001  0.497
2010 Shanks OC, White K, Kelty CA, Hayes S, Sivaganesan M, Jenkins M, Varma M, Haugland RA. Performance assessment PCR-based assays targeting bacteroidales genetic markers of bovine fecal pollution. Applied and Environmental Microbiology. 76: 1359-66. PMID 20061457 DOI: 10.1128/Aem.02033-09  0.502
2009 Shanks OC, Kelty CA, Sivaganesan M, Varma M, Haugland RA. Quantitative PCR for genetic markers of human fecal pollution Applied and Environmental Microbiology. 75: 5507-5513. PMID 19592537 DOI: 10.1128/Aem.00305-09  0.56
2009 Schade T, Field K, Shanks O, Morrison M. HSPF Application to Microbial Indicator Data The Journal of Water Management Modeling. DOI: 10.14796/Jwmm.R235-02  0.389
2008 Lee YJ, Molina M, Santo Domingo JW, Willis JD, Cyterski M, Endale DM, Shanks OC. Temporal assessment of the impact of exposure to cow feces in two watersheds by multiple host-specific PCR assays. Applied and Environmental Microbiology. 74: 6839-47. PMID 18806002 DOI: 10.1128/Aem.00601-08  0.546
2008 Sivaganesan M, Seifring S, Varma M, Haugland RA, Shanks OC. A Bayesian method for calculating real-time quantitative PCR calibration curves using absolute plasmid DNA standards. Bmc Bioinformatics. 9: 120. PMID 18298858 DOI: 10.1186/1471-2105-9-120  0.38
2008 Shanks OC, Atikovic E, Blackwood AD, Lu J, Noble RT, Domingo JS, Seifring S, Sivaganesan M, Haugland RA. Quantitative PCR for detection and enumeration of genetic markers of bovine fecal pollution. Applied and Environmental Microbiology. 74: 745-52. PMID 18065617 DOI: 10.1128/Aem.01843-07  0.52
2007 Lu J, Santo Domingo J, Shanks OC. Identification of chicken-specific fecal microbial sequences using a metagenomic approach. Water Research. 41: 3561-74. PMID 17582456 DOI: 10.1016/J.Watres.2007.05.033  0.476
2007 Shanks OC, Santo Domingo JW, Lu J, Kelty CA, Graham JE. Identification of bacterial DNA markers for the detection of human fecal pollution in water Applied and Environmental Microbiology. 73: 2416-2422. PMID 17209067 DOI: 10.1128/Aem.02474-06  0.51
2007 Leonard JA, Shanks O, Hofreiter M, Kreuz E, Hodges L, Ream W, Wayne RK, Fleischer RC. Animal DNA in PCR reagents plagues ancient DNA research Journal of Archaeological Science. 34: 1361-1366. DOI: 10.1016/J.Jas.2006.10.023  0.382
2006 Shanks OC, Nietch C, Simonich M, Younger M, Reynolds D, Field KG. Basin-wide analysis of the dynamics of fecal contamination and fecal source identification in Tillamook Bay, Oregon. Applied and Environmental Microbiology. 72: 5537-46. PMID 16885307 DOI: 10.1128/Aem.03059-05  0.51
2006 Shanks OC, Santo Domingo JW, Lamendella R, Kelty CA, Graham JE. Competitive metagenomic DNA hybridization identifies host-specific microbial genetic markers in cow fecal samples. Applied and Environmental Microbiology. 72: 4054-60. PMID 16751515 DOI: 10.1128/Aem.00023-06  0.495
2006 Shanks OC, Santo Domingo JW, Graham JE. Use of competitive DNA hybridization to identify differences in the genomes of bacteria. Journal of Microbiological Methods. 66: 321-30. PMID 16469400 DOI: 10.1016/J.Mimet.2005.12.006  0.344
2005 Shanks OC, Hodges L, Tilley L, Kornfeld M, Larson ML, Ream W. DNA from ancient stone tools and bones excavated at Bugas-Holding, Wyoming Journal of Archaeological Science. 32: 27-38. DOI: 10.1016/J.Jas.2004.06.004  0.393
2004 Shanks OC, Kornfeld M, Ream W. DNA and protein recovery from washed experimental stone tools Archaeometry. 46: 663-672. DOI: 10.1111/J.1475-4754.2004.00181.X  0.326
2001 Shanks OC, Bonnichsen R, Vella AT, Ream W. Recovery of protein and DNA trapped in stone tool microcracks Journal of Archaeological Science. 28: 965-972. DOI: 10.1006/Jasc.2000.0628  0.325
1999 Shanks OC, Kornfeld M, Hawk DD. Protein analysis of Bugas-Holding tools: New trends in immunological studies Journal of Archaeological Science. 26: 1183-1191. DOI: 10.1006/Jasc.1998.0353  0.3
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