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Yang Liu - Publications

Affiliations: 
Johns Hopkins University, Baltimore, MD 
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39 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zou RS, Liu Y, Gaido OER, Konig MF, Mog BJ, Shen LL, Aviles-Vazquez F, Marin-Gonzalez A, Ha T. Improving the sensitivity of in vivo CRISPR off-target detection with DISCOVER-Seq. Nature Methods. PMID 37024653 DOI: 10.1038/s41592-023-01840-z  0.415
2023 Liu Y, Cottle WT, Ha T. Mapping cellular responses to DNA double-strand breaks using CRISPR technologies. Trends in Genetics : Tig. PMID 36967246 DOI: 10.1016/j.tig.2023.02.015  0.398
2022 Zou RS, Marin-Gonzalez A, Liu Y, Liu HB, Shen L, Dveirin RK, Luo JXJ, Kalhor R, Ha T. Massively parallel genomic perturbations with multi-target CRISPR interrogates Cas9 activity and DNA repair at endogenous sites. Nature Cell Biology. 24: 1433-1444. PMID 36064968 DOI: 10.1038/s41556-022-00975-z  0.418
2022 Zou RS, Gavrilov M, Liu Y, Rasoloson D, Conte M, Hardick J, Shen L, Chen S, Pekosz A, Seydoux G, Manabe YC, Ha T. Improving the specificity of nucleic acid detection with endonuclease-actuated degradation. Communications Biology. 5: 290. PMID 35361863 DOI: 10.1038/s42003-022-03242-x  0.401
2021 Zou RS, Liu Y, Ha T. CRISPR deactivation in mammalian cells using photocleavable guide RNAs. Star Protocols. 2: 100909. PMID 34746867 DOI: 10.1016/j.xpro.2021.100909  0.371
2021 Zou RS, Liu Y, Ha T. Cleavage and Electrophoretic Mobility Shift Assays for Very Fast CRISPR. Bio-Protocol. 11: e4138. PMID 34604444 DOI: 10.21769/BioProtoc.4138  0.408
2021 Zou RS, Liu Y, Wu B, Ha T. Cas9 deactivation with photocleavable guide RNAs. Molecular Cell. PMID 33662274 DOI: 10.1016/j.molcel.2021.02.007  0.4
2021 Klionsky DJ, Abdel-Aziz AK, Abdelfatah S, Abdellatif M, Abdoli A, Abel S, Abeliovich H, Abildgaard MH, Abudu YP, Acevedo-Arozena A, Adamopoulos IE, Adeli K, Adolph TE, Adornetto A, Aflaki E, ... ... Liu Y, ... ... Liu Y, ... ... Liu Y, ... ... Liu Y, ... ... Liu Y, et al. Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition). Autophagy. 1-382. PMID 33634751 DOI: 10.1080/15548627.2020.1797280  0.446
2020 Lu S, Liu Y, Yu X, Li Y, Yang Y, Wei M, Zhou Q, Wang J, Zhang Y, Zheng W, Chen S. Prediction of genomic breeding values based on pre-selected SNPs using ssGBLUP, WssGBLUP and BayesB for Edwardsiellosis resistance in Japanese flounder. Genetics, Selection, Evolution : Gse. 52: 49. PMID 32811444 DOI: 10.1186/s12711-020-00566-2  0.395
2020 Liu Y, Zou RS, He S, Nihongaki Y, Li X, Razavi S, Wu B, Ha T. Very fast CRISPR on demand. Science (New York, N.Y.). 368: 1265-1269. PMID 32527834 DOI: 10.1126/Science.Aay8204  0.481
2020 Zhang H, Wang Z, Wang F, Zhang Y, Wang H, Liu Y. In Situ Formation of Gold Nanoparticles Decorated Ti3C2 MXenes Nanoprobe for highly sensitive Electrogenerated Chemiluminescence Detection of Exosomes and Their Surface Proteins. Analytical Chemistry. PMID 32186362 DOI: 10.1021/Acs.Analchem.0C00469  0.326
2020 Wiegand T, Fratini M, Frey F, Yserentant K, Liu Y, Weber E, Galior K, Ohmes J, Braun F, Herten DP, Boulant S, Schwarz US, Salaita K, Cavalcanti-Adam EA, Spatz JP. Forces during cellular uptake of viruses and nanoparticles at the ventral side. Nature Communications. 11: 32. PMID 31896744 DOI: 10.1038/S41467-019-13877-W  0.653
2020 Liu Y, Zou R, Nihongaki Y, He S, Razavi S, Wu B, Ha T. Very Fast CRISPR on Demand Biophysical Journal. 118: 29a. DOI: 10.1016/J.Bpj.2019.11.337  0.402
2020 Su H, Brockman J, Blanchard A, Meyer T, Duan Y, Liu Z, Zhao J, Liu Y, Pui-Yan Ma V, Galior K, Dyer RB, Ke Y, Salaita K. Polymer Force Clamps for the Mechanical Unfolding of Target Molecules Biophysical Journal. 118: 349a. DOI: 10.1016/J.Bpj.2019.11.2014  0.755
2019 Zou Y, Zhang H, Wang Z, Liu Q, Liu Y. A novel ECL method for histone acetyltransferases (HATs) activity analysis by integrating HCR signal amplification and ECL silver clusters. Talanta. 198: 39-44. PMID 30876576 DOI: 10.1016/J.Talanta.2019.01.083  0.309
2018 Meng X, Garay MJ, Diner DJ, Kalashnikova OV, Xu J, Liu Y. Estimating PM speciation concentrations using prototype 4.4 km-resolution MISR aerosol properties over Southern California. Atmospheric Environment (Oxford, England : 1994). 181: 70-81. PMID 30546266 DOI: 10.1016/J.Atmosenv.2018.03.019  0.312
2018 Alexander EJ, Ghanbari Niaki A, Zhang T, Sarkar J, Liu Y, Nirujogi RS, Pandey A, Myong S, Wang J. Ubiquilin 2 modulates ALS/FTD-linked FUS-RNA complex dynamics and stress granule formation. Proceedings of the National Academy of Sciences of the United States of America. PMID 30442662 DOI: 10.1073/Pnas.1811997115  0.554
2018 Peng Z, Lu J, Zhang L, Liu Y, Li J. Label-free imaging of epidermal growth factor receptor-induced response in single living cells. The Analyst. PMID 30280173 DOI: 10.1039/C8An01534A  0.323
2018 Biswas J, Liu Y, Singer RH, Wu B. Fluorescence Imaging Methods to Investigate Translation in Single Cells. Cold Spring Harbor Perspectives in Biology. PMID 30082468 DOI: 10.1101/Cshperspect.A032722  0.312
2018 Liu Y, Lu S, Liu F, Shao C, Zhou Q, Wang N, Li Y, Yang Y, Zhang Y, Sun H, Zheng W, Chen S. Genomic Selection Using BayesCπ and GBLUP for Resistance Against Edwardsiella tarda in Japanese Flounder (Paralichthys olivaceus). Marine Biotechnology (New York, N.Y.). PMID 29943315 DOI: 10.1007/s10126-018-9839-z  0.385
2018 Galior K, Ma VP, Liu Y, Su H, Baker N, Panettieri RA, Wongtrakool C, Salaita K. Molecular Tension Probes to Investigate the Mechanopharmacology of Single Cells: A Step toward Personalized Mechanomedicine. Advanced Healthcare Materials. e1800069. PMID 29785773 DOI: 10.1002/Adhm.201800069  0.765
2018 Su H, Liu Z, Liu Y, Ma VP, Blanchard A, Zhao J, Galior K, Dyer RB, Salaita K. Light-Responsive Polymer Particles as Force Clamps for the Mechanical Unfolding of Target Molecules. Nano Letters. PMID 29589759 DOI: 10.1016/J.Bpj.2018.11.2406  0.771
2018 Gao M, Ji D, Liang F, Liu Y. Attribution of aerosol direct radiative forcing in China and India to emitting sectors Atmospheric Environment. 190: 35-42. DOI: 10.1016/J.Atmosenv.2018.07.011  0.321
2017 Liu Y, Galior K, Ma VP, Salaita K. Molecular Tension Probes for Imaging Forces at the Cell Surface. Accounts of Chemical Research. PMID 29160067 DOI: 10.1021/Acs.Accounts.7B00305  0.79
2017 Xiao Q, Wang Y, Chang HH, Meng X, Geng G, Lyapustin AI, Liu Y. Full-coverage high-resolution daily PM 2.5 estimation using MAIAC AOD in the Yangtze River Delta of China Remote Sensing of Environment. 199: 437-446. DOI: 10.1016/J.Rse.2017.07.023  0.306
2016 Ma VP, Liu Y, Blanchfield L, Su H, Evavold BD, Salaita K. Ratiometric tension probes for mapping receptor forces and clustering at intermembrane junctions. Nano Letters. PMID 27192323 DOI: 10.1021/Acs.Nanolett.6B01817  0.779
2016 Liu Y, Blanchfield L, Ma VP, Andargachew R, Galior K, Liu Z, Evavold B, Salaita K. DNA-based nanoparticle tension sensors reveal that T-cell receptors transmit defined pN forces to their antigens for enhanced fidelity. Proceedings of the National Academy of Sciences of the United States of America. PMID 27140637 DOI: 10.1073/Pnas.1600163113  0.745
2016 Ma VP, Liu Y, Yehl K, Galior K, Zhang Y, Salaita K. Mechanically Induced Catalytic Amplification Reaction for Readout of Receptor-Mediated Cellular Forces. Angewandte Chemie (International Ed. in English). PMID 27038115 DOI: 10.1002/Anie.201600351  0.775
2015 Liu Z, Liu Y, Chang Y, Seyf HR, Henry A, Mattheyses AL, Yehl K, Zhang Y, Huang Z, Salaita K. Nanoscale optomechanical actuators for controlling mechanotransduction in living cells. Nature Methods. PMID 26657558 DOI: 10.1038/Nmeth.3689  0.778
2015 Yehl K, Mugler A, Vivek S, Liu Y, Zhang Y, Fan M, Weeks ER, Salaita K. High-speed DNA-based rolling motors powered by RNase H. Nature Nanotechnology. PMID 26619152 DOI: 10.1038/Nnano.2015.259  0.75
2015 Salaita K, Galior K, Liu Y, Yehl K, Vivek S. Titin-based Nanoparticle Tension Sensors Map High-Magnitude Integrin Forces within Focal Adhesions. Nano Letters. PMID 26598972 DOI: 10.1021/Acs.Nanolett.5B03888  0.796
2014 Liu Y, Medda R, Liu Z, Galior K, Yehl K, Spatz JP, Cavalcanti-Adam EA, Salaita K. Nanoparticle tension probes patterned at the nanoscale: impact of integrin clustering on force transmission. Nano Letters. 14: 5539-46. PMID 25238229 DOI: 10.1021/nl501912g  0.798
2014 Jiang T, Xu C, Liu Y, Liu Z, Wall JS, Zuo X, Lian T, Salaita K, Ni C, Pochan D, Conticello VP. Structurally defined nanoscale sheets from self-assembly of collagen-mimetic peptides. Journal of the American Chemical Society. 136: 4300-8. PMID 24571053 DOI: 10.1021/Ja412867Z  0.547
2014 Zheng W, Liu Y, West A, Schuler EE, Yehl K, Dyer RB, Kindt JT, Salaita K. Quantum dots encapsulated within phospholipid membranes: phase-dependent structure, photostability, and site-selective functionalization. Journal of the American Chemical Society. 136: 1992-9. PMID 24417287 DOI: 10.1021/Ja411339F  0.732
2014 Liu Y, Medda R, Liu Z, Galior K, Yehl K, Spatz JP, Cavalcanti-Adam EA, Salaita K. Nanoparticle tension probes patterned at the nanoscale: Impact of integrin clustering on force transmission Nano Letters. 14: 5539-5546. DOI: 10.1021/Nl501912G  0.795
2014 Salaita K, Liu Y, Zhang Y, Stabley D, Jurchenko C, Narui Y, Yang Y. Fluorescence-Based Tension Probes to Image Mechanics at the Lipid Membrane Biophysical Journal. 106. DOI: 10.1016/J.Bpj.2013.11.2581  0.36
2014 Liu Y, Medda R, Cavalcanti-Adam EA, Salaita K. Investigating Focal Adhesion Mechanics using Nanopatterned Molecular Tension Fluorescence Microscopy (MTFM) Biophysical Journal. 106: 424. DOI: 10.1016/J.Bpj.2013.11.2389  0.372
2013 Liu Y, Yehl K, Narui Y, Salaita K. Tension sensing nanoparticles for mechano-imaging at the living/nonliving interface Journal of the American Chemical Society. 135: 5320-5323. PMID 23495954 DOI: 10.1021/Ja401494E  0.791
2010 Liu Y, Park J, Dahmen KA, Chemla YR, Ha T. A comparative study of multivariate and univariate hidden Markov modelings in time-binned single-molecule FRET data analysis. The Journal of Physical Chemistry. B. 114: 5386-403. PMID 20361785 DOI: 10.1021/Jp9057669  0.566
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